mRNA_Ecto-sp13_S_contig814.19483.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig814.19483.1
Unique NamemRNA_Ecto-sp13_S_contig814.19483.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig814.19483.1 vs. uniprot
Match: A0A6H5JA15_9PHAE (BEACH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA15_9PHAE)

HSP 1 Score: 437 bits (1124), Expect = 2.020e-145
Identity = 261/474 (55.06%), Postives = 263/474 (55.49%), Query Frame = 1
Query:    1 QLYESTMRQIEEFGQAPAQLFKSPHPRRLSIAEAEVVRPLASPVPG----------------------------------------------YPRESVSRGAVLVVTDLLPWAERLVTVDTRRAIGFHGWRTLPPERSPPFRLRAEA----------------------------------------------------------------------------------------------------------------------------------------------------------------PTSSPIPVHTRGEGWNRRIGEGVGGGVGLGSHLFAVLAESYLLFSGGHWDSSFRATALDTGRLVVSIARHRDVVTSLSLAEGGKGCRRLVTASRDTTLMVWRVEDTAGERAPPVSPSSLLHVLYGHDTPVTCVCARADLDAIVSSGEDGTVVVHTLWGGEYVRTIIP 804
            QLYESTMRQIEEFGQAPAQLFKSPHPRRLSIAEAEVVRPLASPVPG                                              YPRESVSRGAVLVVTDLLPWAERLVTVDTRRAIGFHGWRTLPPERSPPFRLRAEA                                                                                                                                                                P  SP+PVHTRGEGWNRRIG GVGGGVGLGSHLFAVLAESYLLFSGGHWDSSFRATALDTGRLVVSIARHRDVVTSLSLA+GGKG RRLVTASRDTTLMVWRVEDTAGERAPPVSPSSLLHVLYGHDTPVTCVCARADLDAIVSSGEDGTVVVHTLWGGEYVRTI P
Sbjct:  145 QLYESTMRQIEEFGQAPAQLFKSPHPRRLSIAEAEVVRPLASPVPGANTEPLAEANIPSVTASSAGVAPEVDSASAARTGTTQPPRSHNVVSYPRESVSRGAVLVVTDLLPWAERLVTVDTRRAIGFHGWRTLPPERSPPFRLRAEAVEVGDDPRENGGGRISGDNGGGGLVGXXXXXXGPGGAGSIPVRRFGVPFAPDGVASSRLLEPPPLDSRCGDYGLVGDDDGDVVFTRPLGGLGGSHVSLASMGSLLSLPQACVPASQPPQQLSYPEDQHAKAKSSSCPSSGGPPLGAYDGHHHDDRQQDHEPAGSPVPVHTRGEGWNRRIGGGVGGGVGLGSHLFAVLAESYLLFSGGHWDSSFRATALDTGRLVVSIARHRDVVTSLSLADGGKGYRRLVTASRDTTLMVWRVEDTAGERAPPVSPSSLLHVLYGHDTPVTCVCARADLDAIVSSGEDGTVVVHTLWGGEYVRTITP 618          
BLAST of mRNA_Ecto-sp13_S_contig814.19483.1 vs. uniprot
Match: D8LL16_ECTSI (Similar to neurobeachin like 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL16_ECTSI)

HSP 1 Score: 442 bits (1138), Expect = 3.060e-139
Identity = 261/474 (55.06%), Postives = 265/474 (55.91%), Query Frame = 1
Query:    1 QLYESTMRQIEEFGQAPAQLFKSPHPRRLSIAEAEVVRPLASPVPG----------------------------------------------YPRESVSRGAVLVVTDLLPWAERLVTVDTRRAIGFHGWRTLPPERSPPFRLRAEA----------------------------------------------------------------------------------------------------------------------------------------------------------------PTSSPIPVHTRGEGWNRRIGEGVGGGVGLGSHLFAVLAESYLLFSGGHWDSSFRATALDTGRLVVSIARHRDVVTSLSLAEGGKGCRRLVTASRDTTLMVWRVEDTAGERAPPVSPSSLLHVLYGHDTPVTCVCARADLDAIVSSGEDGTVVVHTLWGGEYVRTIIP 804
            QLYESTMRQIEEFGQAPAQLFKSPHPRRLS+AEAEVVRPLASPVPG                                              YPRESVSRGAVLVVTDLLPWAERLVTVDTRRAIGFHGWRTLPPERSPPFRLRAEA                                                                                                                                                                P  SP+PVHTRGEGWNRRIGEGVGGGVGLGSHLFA+LAESYLLFSGGHWDSSFRATALDTGRLVVSIARHRDVVTSLSLA+GGKGCRRLVTASRDTTLMVWRVEDTAGERAPPVSPSSLLHVLYGHDTPVTCVCARADLDAIVSSGEDGTVVVHTLWGGEYVRTI P
Sbjct: 3763 QLYESTMRQIEEFGQAPAQLFKSPHPRRLSMAEAEVVRPLASPVPGSNTEPLAEANIPSVTGSSAGVAAEVDGASAARMGTAPPPRSHNVVSYPRESVSRGAVLVVTDLLPWAERLVTVDTRRAIGFHGWRTLPPERSPPFRLRAEAVEVGDDPRENDGGRISGDNGGGGLVGXXXXXAGPRGAGSIPVRRFGVPFAPDGVASSRLLEPPPLDGRCGDYGLGGDDDGDVVFTRPLGGLGGSHVSLASMGSLLSLPQASVPASQPPQQLSYPEDQHAKAKSSSCSSSGGPPLDAYDGHHHDDRQQDHEPAGSPVPVHTRGEGWNRRIGEGVGGGVGLGSHLFAILAESYLLFSGGHWDSSFRATALDTGRLVVSIARHRDVVTSLSLADGGKGCRRLVTASRDTTLMVWRVEDTAGERAPPVSPSSLLHVLYGHDTPVTCVCARADLDAIVSSGEDGTVVVHTLWGGEYVRTITP 4236          
BLAST of mRNA_Ecto-sp13_S_contig814.19483.1 vs. uniprot
Match: UPI0018863B45 (neurobeachin-like protein 2 isoform X2 n=1 Tax=Syngnathus acus TaxID=161584 RepID=UPI0018863B45)

HSP 1 Score: 140 bits (354), Expect = 4.240e-34
Identity = 104/278 (37.41%), Postives = 135/278 (48.56%), Query Frame = 1
Query:   28 IEEFGQAPAQLFKSPHPRRLSIAEAE--VVRPLASPVPGYPRESVSRGAVLVVTDLLPWAER-----------------LVTVDTRRAIGFHGWRTLPPERSPPFRLRAEAPTSSPIPVHTRGEGWNRRIGEGVGGGVGLGSHLFAVLAESYLLFSGGHWDSSFRATALDTGRLVVSIARHRDVVTSLSLAEGGKGCRRLVTASRDTTLMVWRVEDTAGERAPPVSPSSLLHVLYGHDTPVTCVCARADLDAIVSSGEDGTVVVHTLWGGEYVRTIIP 804
            I EFGQ P QL K PHP R+S A       R    PV  +   +  R  V VV+D +P  +                  +VTV +   IG H W       +  F    +   ++P    TR     R +G     GV L + +  V  +  LLFSGGHWD S R T L  G+LV  I RH DVVT L+L   G     L++ SRDT+ MVW+V    G  +  +SP  +  VL GHD  VTCV    +LD  VS  +DGTV+VHT+  G Y+RT+ P
Sbjct: 2363 ISEFGQTPCQLLKEPHPPRMSAANVSRRQSRLDTLPVNIFDNLNKLRSFVEVVSDGIPLVQAVVPKNQNRSSIIHGSNIMVTVSSSGLIGTHSWLPYDKNIANYFTFAKDPTVTNP---KTR-----RFLGGPFSPGVELSAQILVVSNDGRLLFSGGHWDCSLRVTQLGKGKLVGRICRHIDVVTCLALDLCGI---YLISGSRDTSCMVWQVLQQGGLSS-TLSPRPV-QVLCGHDQEVTCVAISTELDMAVSGSKDGTVIVHTIRRGHYLRTLRP 2627          
BLAST of mRNA_Ecto-sp13_S_contig814.19483.1 vs. uniprot
Match: UPI0018860275 (neurobeachin-like protein 2 isoform X1 n=2 Tax=Syngnathus acus TaxID=161584 RepID=UPI0018860275)

HSP 1 Score: 140 bits (354), Expect = 4.240e-34
Identity = 104/278 (37.41%), Postives = 135/278 (48.56%), Query Frame = 1
Query:   28 IEEFGQAPAQLFKSPHPRRLSIAEAE--VVRPLASPVPGYPRESVSRGAVLVVTDLLPWAER-----------------LVTVDTRRAIGFHGWRTLPPERSPPFRLRAEAPTSSPIPVHTRGEGWNRRIGEGVGGGVGLGSHLFAVLAESYLLFSGGHWDSSFRATALDTGRLVVSIARHRDVVTSLSLAEGGKGCRRLVTASRDTTLMVWRVEDTAGERAPPVSPSSLLHVLYGHDTPVTCVCARADLDAIVSSGEDGTVVVHTLWGGEYVRTIIP 804
            I EFGQ P QL K PHP R+S A       R    PV  +   +  R  V VV+D +P  +                  +VTV +   IG H W       +  F    +   ++P    TR     R +G     GV L + +  V  +  LLFSGGHWD S R T L  G+LV  I RH DVVT L+L   G     L++ SRDT+ MVW+V    G  +  +SP  +  VL GHD  VTCV    +LD  VS  +DGTV+VHT+  G Y+RT+ P
Sbjct: 2364 ISEFGQTPCQLLKEPHPPRMSAANVSRRQSRLDTLPVNIFDNLNKLRSFVEVVSDGIPLVQAVVPKNQNRSSIIHGSNIMVTVSSSGLIGTHSWLPYDKNIANYFTFAKDPTVTNP---KTR-----RFLGGPFSPGVELSAQILVVSNDGRLLFSGGHWDCSLRVTQLGKGKLVGRICRHIDVVTCLALDLCGI---YLISGSRDTSCMVWQVLQQGGLSS-TLSPRPV-QVLCGHDQEVTCVAISTELDMAVSGSKDGTVIVHTIRRGHYLRTLRP 2628          
BLAST of mRNA_Ecto-sp13_S_contig814.19483.1 vs. uniprot
Match: A0A8C2SEP5_CAPHI (Neurobeachin like 2 n=1 Tax=Capra hircus TaxID=9925 RepID=A0A8C2SEP5_CAPHI)

HSP 1 Score: 140 bits (352), Expect = 4.340e-34
Identity = 101/282 (35.82%), Postives = 132/282 (46.81%), Query Frame = 1
Query:   28 IEEFGQAPAQLFKSPHPRRLSIAEA------------EVVRPLASPVPGYPRESVSRGAVLVVTDLLPW-----------AERLVTVDTRRAIGFHGWRTLPPERSPPFRLRAEAPTSSPIPVHTRGEGWNRRIGEGVGGGVGLGSHLFAVLAESYLLFSGGHWDSSFRATALDTGRLVVSIARHRDVVTSLSLAEGGKGCRRLVTASRDTTLMVWRVEDTAGERAPPVSPSSLLHVLYGHDTPVTCVCARADLDAIVSSGEDGTVVVHTLWGGEYVRTIIP 804
            I  FGQ P QL K PHP RLS+ EA             + + L   +  +  E +S G  LV+  L+P            A+ LVTV     +G H W       S  F    +    +P         W        GGGV       AV  +  LLFSGGHWD S R TAL  GRL+  +  H D+VT L+L   G     L++ SRDTT MVWR+   +G      S    + VLYGH+  V+CV    +LD  VS  EDGTV++HT+  G++V T+ P
Sbjct:  270 ISNFGQTPCQLLKEPHPARLSVEEAAQRLARLDTNSPSIFQHLGQ-LKAFFAEVISDGVPLVLA-LVPHRQPHSFITQGSADLLVTVSANGLLGTHSWLPYDRNISNYFSFSKDPTMGNPKMQRLLSGPW------APGGGVS--GQALAVAPDGKLLFSGGHWDGSLRVTALPRGRLLSQLRCHLDIVTCLALDTCGI---YLISGSRDTTCMVWRLMQQSGLSVGLASKP--VQVLYGHEAAVSCVAISTELDMAVSGSEDGTVIIHTVRRGQFVATLSP 536          
BLAST of mRNA_Ecto-sp13_S_contig814.19483.1 vs. uniprot
Match: K7GGM5_PELSI (BEACH domain-containing protein n=1 Tax=Pelodiscus sinensis TaxID=13735 RepID=K7GGM5_PELSI)

HSP 1 Score: 138 bits (347), Expect = 4.840e-34
Identity = 105/282 (37.23%), Postives = 136/282 (48.23%), Query Frame = 1
Query:   28 IEEFGQAPAQLFKSPHPRRLSIAEA--EVVR-PLASP--------VPGYPRESVSRGAVLV------------VTDLLPWAERLVTVDTRRAIGFHGWRTLPPERSPPFRLRAEAPTSSPIPVHTRGEGWNRRIGEGVGGGVGLGSHLFAVLAESYLLFSGGHWDSSFRATALDTGRLVVSIARHRDVVTSLSLAEGGKGCRRLVTASRDTTLMVWRVEDTAGERAPPVSPSSLLHVLYGHDTPVTCVCARADLDAIVSSGEDGTVVVHTLWGGEYVRTIIP 804
            I  FGQ P QL K PHP RLS   A   V R    SP        +  +  E +S G  LV            +T   P  + LVTV     +G HGW       S  F       T  P   + + +   R +      G  L +    V  +  LLFSGGHWD+S R TAL  G++V  IARH DVVT L+L   G     L++ SRDTT MVWRV    G  +  ++P  +  VLYGHD  VTCV    +LD  VS  +DGT++VHT+  G+++ +I P
Sbjct:  178 ISNFGQTPCQLLKEPHPVRLSAENAARRVARLDTYSPDVFENLHQLKSFFVEGISDGVPLVQAVVPKNQAHSFITQGSP--DVLVTVSANGLLGTHGWLPYDKNISNYFSF-----TKDPTVTNAKAQ---RVLSGPFAPGAELSARTLTVSPDGKLLFSGGHWDNSLRVTALSKGKVVGHIARHIDVVTCLALDLCGI---YLISGSRDTTCMVWRVLQQGGFSS-NLAPKPV-QVLYGHDAEVTCVAINTELDMAVSGSQDGTIIVHTIRRGQFMTSIRP 444          
BLAST of mRNA_Ecto-sp13_S_contig814.19483.1 vs. uniprot
Match: A0A3B3Q3K9_9TELE (Neurobeachin-like 2 n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3Q3K9_9TELE)

HSP 1 Score: 139 bits (349), Expect = 1.960e-33
Identity = 98/277 (35.38%), Postives = 134/277 (48.38%), Query Frame = 1
Query:   28 IEEFGQAPAQLFKSPHPRRLSIAEAEVVRPLASPVPG--YPRESVSRGAVLVVTDLLPWAER----------------LVTVDTRRAIGFHGWRTLPPERSPPFRLRAEAPTSSPIPVHTRGEGWNRRIGEGVGGGVGLGSHLFAVLAESYLLFSGGHWDSSFRATALDTGRLVVSIARHRDVVTSLSLAEGGKGCRRLVTASRDTTLMVWRVEDTAGERAPPVSPSSLLHVLYGHDTPVTCVCARADLDAIVSSGEDGTVVVHTLWGGEYVRTIIP 804
            I  FGQ P QL K PHP R+S   A   +     +P   +   S  +  V VV+D +P  +                 LVTV     +G H W       +  F    +   S+P           R +G     GV LG+ +  V  +  LLFSGGHWD S R TAL  G+LV  I RH DVV+ L+L   G     L++ SRDTT MVW V+   G  +  +SP  +  VL GHD  VTCV    +LD  VS  +DGT+++H++  G+++RT+ P
Sbjct: 2312 ISNFGQTPCQLLKEPHPPRMSAESASRRQSRIDTLPPNLFDHLSKLKAFVEVVSDGVPLVQAVVPRTQTRYITQGTDVLVTVSASGLLGTHSWLPYDKTIANYFTFTKDPTMSNPKT--------QRMLGGPFSPGVDLGARVLVVSNDGRLLFSGGHWDCSLRVTALAKGKLVGRICRHIDVVSCLALDLCGI---YLISGSRDTTCMVWEVQQQGGFSS-GLSPRPV-QVLCGHDQEVTCVAISTELDMAVSGSKDGTLIIHSVRRGQFLRTLHP 2575          
BLAST of mRNA_Ecto-sp13_S_contig814.19483.1 vs. uniprot
Match: UPI000CD5ECF4 (LOW QUALITY PROTEIN: neurobeachin-like protein 2 n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=UPI000CD5ECF4)

HSP 1 Score: 139 bits (349), Expect = 1.960e-33
Identity = 98/277 (35.38%), Postives = 134/277 (48.38%), Query Frame = 1
Query:   28 IEEFGQAPAQLFKSPHPRRLSIAEAEVVRPLASPVPG--YPRESVSRGAVLVVTDLLPWAER----------------LVTVDTRRAIGFHGWRTLPPERSPPFRLRAEAPTSSPIPVHTRGEGWNRRIGEGVGGGVGLGSHLFAVLAESYLLFSGGHWDSSFRATALDTGRLVVSIARHRDVVTSLSLAEGGKGCRRLVTASRDTTLMVWRVEDTAGERAPPVSPSSLLHVLYGHDTPVTCVCARADLDAIVSSGEDGTVVVHTLWGGEYVRTIIP 804
            I  FGQ P QL K PHP R+S   A   +     +P   +   S  +  V VV+D +P  +                 LVTV     +G H W       +  F    +   S+P           R +G     GV LG+ +  V  +  LLFSGGHWD S R TAL  G+LV  I RH DVV+ L+L   G     L++ SRDTT MVW V+   G  +  +SP  +  VL GHD  VTCV    +LD  VS  +DGT+++H++  G+++RT+ P
Sbjct: 2317 ISNFGQTPCQLLKEPHPPRMSAESASRRQSRIDTLPPNLFDHLSKLKAFVEVVSDGVPLVQAVVPRTQTRYITQGTDVLVTVSASGLLGTHSWLPYDKTIANYFTFTKDPTMSNPKT--------QRMLGGPFSPGVDLGARVLVVSNDGRLLFSGGHWDCSLRVTALAKGKLVGRICRHIDVVSCLALDLCGI---YLISGSRDTTCMVWEVQQQGGFSS-GLSPRPV-QVLCGHDQEVTCVAISTELDMAVSGSKDGTLIIHSVRRGQFLRTLHP 2580          
BLAST of mRNA_Ecto-sp13_S_contig814.19483.1 vs. uniprot
Match: A0A8C5KZ91_JACJA (Neurobeachin like 2 n=3 Tax=Jaculus jaculus TaxID=51337 RepID=A0A8C5KZ91_JACJA)

HSP 1 Score: 137 bits (346), Expect = 4.920e-33
Identity = 99/282 (35.11%), Postives = 135/282 (47.87%), Query Frame = 1
Query:   28 IEEFGQAPAQLFKSPHPRRLSIAEA------------EVVRPLASPVPGYPRESVSRGAVLVVTDLLPW-----------AERLVTVDTRRAIGFHGWRTLPPERSPPFRLRAEAPTSSPIPVHTRGEGWNRRIGEGVGGGVGLGSHLFAVLAESYLLFSGGHWDSSFRATALDTGRLVVSIARHRDVVTSLSLAEGGKGCRRLVTASRDTTLMVWRVEDTAGERAPPVSPSSLLHVLYGHDTPVTCVCARADLDAIVSSGEDGTVVVHTLWGGEYVRTIIP 804
            I  FGQ P QL K PHP RLS  EA             + + L + +  +  E VS G V VV  L+P            ++ LVTV     +G H W       +  F    +    +P         W          G G+     AV  +  LLFSGGHWD S R TAL  G+L+  +++H D+VT L+L   G     L++ SRDTT MVWR+    G     ++P  +  VLYGH+T V+CV  R +LD  VS  E GTV++HT+  G++V T+ P
Sbjct: 2316 ISNFGQTPCQLLKEPHPARLSAEEAAHRLARLDTNSPSIFQNL-NQLKAFFAEVVSEG-VPVVFALVPHRQPHSFITQSSSDLLVTVSANGLLGTHSWLPYDRNINNYFSFSKDPTMGNPKMQRLLSGPWMP--------GSGVSGQALAVAPDGKLLFSGGHWDGSLRVTALPRGKLLNQLSQHLDIVTCLALDTYGI---YLISGSRDTTCMVWRLLQQGGLSV-GLAPKPV-QVLYGHETAVSCVAIRTELDMAVSGSEGGTVIIHTIRRGQFVATLRP 2582          
BLAST of mRNA_Ecto-sp13_S_contig814.19483.1 vs. uniprot
Match: UPI00147A972D (neurobeachin-like protein 2 isoform X2 n=1 Tax=Pangasianodon hypophthalmus TaxID=310915 RepID=UPI00147A972D)

HSP 1 Score: 137 bits (346), Expect = 4.930e-33
Identity = 100/278 (35.97%), Postives = 134/278 (48.20%), Query Frame = 1
Query:   28 IEEFGQAPAQLFKSPHPRRLSIAEAEVVRPLASPVPGYPRESVS--RGAVLVVTD-----------------LLPWAERLVTVDTRRAIGFHGWRTLPPERSPPFRLRAEAPTSSPIPVHTRGEGWNRRIGEGVGGGVGLGSHLFAVLAESYLLFSGGHWDSSFRATALDTGRLVVSIARHRDVVTSLSLAEGGKGCRRLVTASRDTTLMVWRVEDTAGERAPPVSPSSLLHVLYGHDTPVTCVCARADLDAIVSSGEDGTVVVHTLWGGEYVRTIIP 804
            I  FGQ P QL K PHP R+    A   +     +P    E +   R  V VV D                 ++P ++ LVTV  +  IG H W       +  F    +   S+P           R +      GV +G+ +  V  ++ LLFSGGHWD S R T L   +LV  I RH DVVT L+L   G     L++ SRDTT MVW+V    G  +  +SP  +  VL GHDT VTCV    +LD  VS  +DGTV+VH++  G+Y+RT+ P
Sbjct: 2366 ISNFGQTPCQLLKEPHPPRMLAQSASRRQARIDTLPPNLFEHLDKLRPFVEVVNDGVPLVQAMVPRNQTRSFIIPGSDVLVTVSAKGQIGTHSWLPYDKNIANYFTFTKDPTMSNPKT--------QRFLSGPFSPGVDIGAQVLVVSNDARLLFSGGHWDCSLRVTTLAKAKLVGRICRHIDVVTCLALDLCGI---YLISGSRDTTCMVWQVLQQGGFSS-GLSPRPV-QVLCGHDTEVTCVSISTELDMAVSGSKDGTVIVHSVRRGQYLRTLRP 2630          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig814.19483.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JA15_9PHAE2.020e-14555.06BEACH domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LL16_ECTSI3.060e-13955.06Similar to neurobeachin like 1 n=1 Tax=Ectocarpus ... [more]
UPI0018863B454.240e-3437.41neurobeachin-like protein 2 isoform X2 n=1 Tax=Syn... [more]
UPI00188602754.240e-3437.41neurobeachin-like protein 2 isoform X1 n=2 Tax=Syn... [more]
A0A8C2SEP5_CAPHI4.340e-3435.82Neurobeachin like 2 n=1 Tax=Capra hircus TaxID=992... [more]
K7GGM5_PELSI4.840e-3437.23BEACH domain-containing protein n=1 Tax=Pelodiscus... [more]
A0A3B3Q3K9_9TELE1.960e-3335.38Neurobeachin-like 2 n=1 Tax=Paramormyrops kingsley... [more]
UPI000CD5ECF41.960e-3335.38LOW QUALITY PROTEIN: neurobeachin-like protein 2 n... [more]
A0A8C5KZ91_JACJA4.920e-3335.11Neurobeachin like 2 n=3 Tax=Jaculus jaculus TaxID=... [more]
UPI00147A972D4.930e-3335.97neurobeachin-like protein 2 isoform X2 n=1 Tax=Pan... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig814contigEcto-sp13_S_contig814:13993..15414 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score435.3
Seed ortholog evalue2.1e-119
Seed eggNOG ortholog2880.D8LL16
Model size804
Hectar predicted targeting categoryother localisation
Exons3
EggNOG free text desc.platelet formation
EggNOG OGsKOG1787@1,KOG1787@2759
Cds size786
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464086.2731595-UTR-Ecto-sp13_S_contig814:13992..140101681464086.2731595-UTR-Ecto-sp13_S_contig814:13992..14010Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig814 13993..14010 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464086.2838945-CDS-Ecto-sp13_S_contig814:14010..141291681464086.2838945-CDS-Ecto-sp13_S_contig814:14010..14129Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig814 14011..14129 +
1681464086.2932742-CDS-Ecto-sp13_S_contig814:14267..144331681464086.2932742-CDS-Ecto-sp13_S_contig814:14267..14433Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig814 14268..14433 +
1681464086.3024886-CDS-Ecto-sp13_S_contig814:14913..154141681464086.3024886-CDS-Ecto-sp13_S_contig814:14913..15414Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig814 14914..15414 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig814.19483.1prot_Ecto-sp13_S_contig814.19483.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig814 14011..15414 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig814.19483.1

>prot_Ecto-sp13_S_contig814.19483.1 ID=prot_Ecto-sp13_S_contig814.19483.1|Name=mRNA_Ecto-sp13_S_contig814.19483.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=262bp
MRQIEEFGQAPAQLFKSPHPRRLSIAEAEVVRPLASPVPGYPRESVSRGA
VLVVTDLLPWAERLVTVDTRRAIGFHGWRTLPPERSPPFRLRAEAPTSSP
IPVHTRGEGWNRRIGEGVGGGVGLGSHLFAVLAESYLLFSGGHWDSSFRA
TALDTGRLVVSIARHRDVVTSLSLAEGGKGCRRLVTASRDTTLMVWRVED
TAGERAPPVSPSSLLHVLYGHDTPVTCVCARADLDAIVSSGEDGTVVVHT
LWGGEYVRTIIP
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mRNA from alignment at Ecto-sp13_S_contig814:13993..15414+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig814.19483.1 ID=mRNA_Ecto-sp13_S_contig814.19483.1|Name=mRNA_Ecto-sp13_S_contig814.19483.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1422bp|location=Sequence derived from alignment at Ecto-sp13_S_contig814:13993..15414+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGCTCTACGAGTCGACGATGAGGCAGATCGAAGAGTTCGGACAGGCCCC AGCTCAGCTGTTCAAGTCACCTCACCCCCGTCGCCTCTCAATAGCAGAAG CGGAGGTGGTGCGACCGCTAGCAAGCCCTGTCCCGGGGTCCAACACAGAA CTGCTTGCAGAGGCAAACATCCCCTCGGTGACGGCCTCTTCTGCGGGCGT AGCCGCCGAAGTTGACGGCGCTTCGGCGGCGAGGACGGGAACGGCGCCGC CGCCGCGTTCACACAACGTGGTGAGCTATCCGAGGGAAAGTGTCAGCCGG GGCGCTGTGCTAGTGGTCACCGACCTACTCCCCTGGGCAGAGCGCCTCGT GACGGTAGATACACGCCGCGCGATCGGGTTCCATGGATGGCGCACCCTGC CTCCAGAGAGAAGCCCGCCTTTCCGACTGCGGGCAGAAGCGGTAGAGGTG GGCGAAGACCCACGGGGAAATGACGGAGGAAGGATGTCAGGAGACAACGG CGGCGGCGGGTTGGTGGGGGCTGGAGGAGGAGGGGCAGGACCAGGGGGGG CGGGAAGTATTCCGGTGCGCCGCTTCGGCGTGCCGTTCGCCCCTGATGGG GTGGCTTCCTCCAGGCTGCTCGAACCGCCGCCCCTTGACAGCCGCTGCGG CGATTATGGCCTAGTCGGTGATGATGACGGTGATGTTGTCTTCACCTGTC CGCTGGGAGGTCTCGGGGGGTCCCACGTCTCCCTTGCTTCCATGGGATCG CTCTTGTCCCTACCTCAGGCTTCTGTGCCCTCTTCTCAGCCGCCACAGCA GCTTTCGTACCGTGAGGACCAGCACGCGAAGGCGAAGTCGTCCTCGTGTT CGTCTTGGGGAGGGCCGCCGCTAGATGCTTTTGACGGCCACCACCATGAC GATCGGCAGCAAGACCATGAGCCGACCAGTTCCCCCATCCCTGTTCACAC AAGGGGCGAAGGCTGGAATCGACGTATCGGTGAGGGTGTGGGTGGCGGTG TTGGCCTTGGGTCGCACCTATTCGCCGTCCTCGCGGAATCTTACCTGCTG TTCAGCGGCGGCCATTGGGACTCGTCGTTCCGCGCCACAGCGCTGGACAC GGGGCGGCTTGTGGTCTCGATCGCGCGTCACCGCGACGTGGTAACGAGCC TGTCTTTAGCCGAAGGAGGCAAAGGGTGCCGGAGACTCGTGACGGCATCG AGAGACACGACTCTTATGGTGTGGAGGGTAGAAGACACTGCCGGGGAGCG AGCCCCCCCGGTGTCGCCGTCTTCCCTCCTTCATGTCCTTTACGGGCACG ACACCCCGGTGACTTGTGTCTGCGCCCGGGCGGACCTGGACGCCATTGTG AGTTCCGGTGAGGACGGCACTGTTGTGGTGCACACCCTATGGGGGGGGGA GTACGTGCGAACGATAATCCCG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig814:13993..15414+

>mRNA_Ecto-sp13_S_contig814.19483.1 ID=mRNA_Ecto-sp13_S_contig814.19483.1|Name=mRNA_Ecto-sp13_S_contig814.19483.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=786bp|location=Sequence derived from alignment at Ecto-sp13_S_contig814:13993..15414+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGGCAGATCGAAGAGTTCGGACAGGCCCCAGCTCAGCTGTTCAAGTC
ACCTCACCCCCGTCGCCTCTCAATAGCAGAAGCGGAGGTGGTGCGACCGC
TAGCAAGCCCTGTCCCGGGCTATCCGAGGGAAAGTGTCAGCCGGGGCGCT
GTGCTAGTGGTCACCGACCTACTCCCCTGGGCAGAGCGCCTCGTGACGGT
AGATACACGCCGCGCGATCGGGTTCCATGGATGGCGCACCCTGCCTCCAG
AGAGAAGCCCGCCTTTCCGACTGCGGGCAGAAGCGCCGACCAGTTCCCCC
ATCCCTGTTCACACAAGGGGCGAAGGCTGGAATCGACGTATCGGTGAGGG
TGTGGGTGGCGGTGTTGGCCTTGGGTCGCACCTATTCGCCGTCCTCGCGG
AATCTTACCTGCTGTTCAGCGGCGGCCATTGGGACTCGTCGTTCCGCGCC
ACAGCGCTGGACACGGGGCGGCTTGTGGTCTCGATCGCGCGTCACCGCGA
CGTGGTAACGAGCCTGTCTTTAGCCGAAGGAGGCAAAGGGTGCCGGAGAC
TCGTGACGGCATCGAGAGACACGACTCTTATGGTGTGGAGGGTAGAAGAC
ACTGCCGGGGAGCGAGCCCCCCCGGTGTCGCCGTCTTCCCTCCTTCATGT
CCTTTACGGGCACGACACCCCGGTGACTTGTGTCTGCGCCCGGGCGGACC
TGGACGCCATTGTGAGTTCCGGTGAGGACGGCACTGTTGTGGTGCACACC
CTATGGGGGGGGGAGTACGTGCGAACGATAATCCCG
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