mRNA_Ecto-sp13_S_contig8114.19458.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8114.19458.1 vs. uniprot
Match: D7FRF0_ECTSI (Tesmin-like, animal TCX proteins are associated with development of both male and female reproductiv n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRF0_ECTSI) HSP 1 Score: 321 bits (822), Expect = 4.160e-103 Identity = 158/163 (96.93%), Postives = 159/163 (97.55%), Query Frame = 1
Query: 1 PTPPLATKPASTSSGVKAETPAAVGVTGCGGGRDLLPVTCNCKKSKCLKLYCECFQRQQYCNGCNCVECLNTERTEDLRQLAIQGTIERNPQAFVSKFERRAGKRSHNAGCNCKKSACLKKYCECFQAGVACGTNCKCVNCKNYEGAAGGRKRRAVESPAAVA 489
PTPPLATKPASTS GVKAETPAAVG+ GCGGGRD L VTCNCKKSKCLKLYCECFQRQQYCNGCNCVECLNTERTEDLRQLAIQGTIERNPQAFVSKFERRAGKRSHNAGCNCKKSACLKKYCECFQAGVACGTNCKCVNCKNYEGAAGGRKRRAVESPAAVA
Sbjct: 401 PTPPLATKPASTSRGVKAETPAAVGMAGCGGGRDPLSVTCNCKKSKCLKLYCECFQRQQYCNGCNCVECLNTERTEDLRQLAIQGTIERNPQAFVSKFERRAGKRSHNAGCNCKKSACLKKYCECFQAGVACGTNCKCVNCKNYEGAAGGRKRRAVESPAAVA 563
BLAST of mRNA_Ecto-sp13_S_contig8114.19458.1 vs. uniprot
Match: A0A6H5KNX0_9PHAE (CRC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX0_9PHAE) HSP 1 Score: 315 bits (807), Expect = 7.260e-98 Identity = 163/187 (87.17%), Postives = 166/187 (88.77%), Query Frame = 1
Query: 1 PTPPLATKP-ASTSSGVKAETPAAVGVTGCGGGRDLLPVTCNCKKSKCLKLYCECFQRQQYCNGCNCVECLNTERTEDLRQLAIQGTIERNPQAFVSKFERRAGKRSHNAGCNCKKSACLKKYCECFQAGVACGTNCKCVNCKNYEGAAGGRKRRAVESPAAVAAPRTP-------PRMSPRVRGAV 537
PTPPL TKP ASTSSGVKAETPAAVG+ GCGGGRD L VTCNCKKSKCLKLYCECFQRQQYC GCNC+ECLNTERTEDLRQLAIQGT+ERNPQAFVSKFERRAGKRSHNAGCNCKKSACLKKYCECFQAGVACGTNCKCVNCKNYEGAAGGRKRRAVESPA PRMSPRVRGAV
Sbjct: 640 PTPPLVTKPPASTSSGVKAETPAAVGLAGCGGGRDPLLVTCNCKKSKCLKLYCECFQRQQYCKGCNCMECLNTERTEDLRQLAIQGTMERNPQAFVSKFERRAGKRSHNAGCNCKKSACLKKYCECFQAGVACGTNCKCVNCKNYEGAAGGRKRRAVESPAXXXXXXXXXXXXXXXPRMSPRVRGAV 826
BLAST of mRNA_Ecto-sp13_S_contig8114.19458.1 vs. uniprot
Match: A0A5J4YAE3_9CHLO (CRC domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YAE3_9CHLO) HSP 1 Score: 155 bits (392), Expect = 2.250e-42 Identity = 68/114 (59.65%), Postives = 79/114 (69.30%), Query Frame = 1
Query: 118 CNCKKSKCLKLYCECFQRQQYCNGCNCVECLNTERTEDLRQLAIQGTIERNPQAFVSKFERRA-------GKRSHNAGCNCKKSACLKKYCECFQAGVACGTNCKCVNCKNYEG 438
CNCK S+CLKLYCECF +YC+GCNCV C N E RQ A++ +ERNP AF K + A G HN GCNCKKS CLKKYCECFQAG+ CG NCKC++CKN+EG
Sbjct: 63 CNCKNSRCLKLYCECFASGRYCDGCNCVNCCNNMENESTRQSAVEAILERNPNAFRPKIQAGASEEGTVAGTARHNKGCNCKKSGCLKKYCECFQAGIYCGDNCKCIDCKNFEG 176
BLAST of mRNA_Ecto-sp13_S_contig8114.19458.1 vs. uniprot
Match: A0A7S3YLM9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YLM9_HETAK) HSP 1 Score: 148 bits (374), Expect = 4.120e-42 Identity = 68/105 (64.76%), Postives = 76/105 (72.38%), Query Frame = 1
Query: 118 CNCKKSKCLKLYCECFQRQQYCNGCNCVECLNTERTEDLRQLAIQGTIERNPQAFVSKFERRA-GKRSHNAGCNCKKSACLKKYCECFQAGVACGTNCKCVNCKN 429
CNCKKSKCLKLYCECF +YC CNCV+C N TE RQ AI+ +ERNP+AF SK R A K+ H+ GCNCKKS+CLKKYCECFQAGV C CKC C N
Sbjct: 46 CNCKKSKCLKLYCECFAAGKYCGACNCVDCQNAPATEAQRQDAIKAILERNPKAFSSKINREALHKQHHSTGCNCKKSSCLKKYCECFQAGVPCSARCKCAACLN 150
BLAST of mRNA_Ecto-sp13_S_contig8114.19458.1 vs. uniprot
Match: A0A2P6TP82_CHLSO (Tesmin TSO1-like CXC 5 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TP82_CHLSO) HSP 1 Score: 155 bits (392), Expect = 3.920e-41 Identity = 73/127 (57.48%), Postives = 84/127 (66.14%), Query Frame = 1
Query: 118 CNCKKSKCLKLYCECFQRQQYCNGCNCVECLNTERTEDLRQLAIQGTIERNPQAFVSKF-----ERRAGKRSHNAGCNCKKSACLKKYCECFQAGVACGTNCKCVNCKNYEGAAGGRKRRAVESPAA 483
CNCK S+CLKLYCECF +YC+GCNC C N E RQ A++ +ERNP AF K R AG HN GCNCKKS CLKKYCECFQAG+ C NCKC++CKNYEG+ R A+ SP A
Sbjct: 133 CNCKNSRCLKLYCECFASGRYCDGCNCTNCYNNRDHEATRQAAVEAILERNPNAFRPKIAGGSDSRHAGGARHNKGCNCKKSGCLKKYCECFQAGIVCSDNCKCLDCKNYEGS---EAREALISPQA 256
BLAST of mRNA_Ecto-sp13_S_contig8114.19458.1 vs. uniprot
Match: A0A087SIS7_AUXPR (Lin-54-like protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SIS7_AUXPR) HSP 1 Score: 150 bits (380), Expect = 7.710e-41 Identity = 70/130 (53.85%), Postives = 85/130 (65.38%), Query Frame = 1
Query: 91 GGRDLLPVT-------CNCKKSKCLKLYCECFQRQQYCNGCNCVECLNTERTEDLRQLAIQGTIERNPQAF-------VSKFERRAGKRSHNAGCNCKKSACLKKYCECFQAGVACGTNCKCVNCKNYEG 438
GGR P T CNCK S+CLKLYCECF +YC+GCNCV C N ++ E +RQ A++ ++RNP AF V++ G HN GCNCKKS CLKKYCECFQAG+ C NCKC +CKNY+G
Sbjct: 24 GGRPRNPPTAANSKRHCNCKNSRCLKLYCECFASGRYCDGCNCVGCCNNQQNEGVRQSAVEAILDRNPNAFRPKIAGDVTEEGASLGAARHNKGCNCKKSGCLKKYCECFQAGIFCSENCKCCDCKNYDG 153
BLAST of mRNA_Ecto-sp13_S_contig8114.19458.1 vs. uniprot
Match: A0A7S2SM18_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SM18_9STRA) HSP 1 Score: 144 bits (364), Expect = 1.540e-40 Identity = 70/135 (51.85%), Postives = 89/135 (65.93%), Query Frame = 1
Query: 118 CNCKKSKCLKLYCECFQRQQYCNGCNCVECLNTERTEDLRQLAIQGTIERNPQAFVSKFERRA-GKRSHNAGCNCKKSACLKKYCECFQAGVACGTNCKCVNCKNYEGAAGGRKRRAVESPAAVAAPRTPPRMSP 519
CNCK SKCLKLYC+CF YCNGCNC +C N E RQ A Q T+E+NP AF +K ++ G H++GC+CKKS CLKKYCECF+A V CG CKC++C+NY G+ ++R+A A TPP+ P
Sbjct: 27 CNCKNSKCLKLYCDCFASSIYCNGCNCKDCHNNPEHEAERQDARQSTLEKNPNAFQAKIKKGGQGGSEHSSGCHCKKSKCLKKYCECFEALVFCGEKCKCLDCENYAGSIALQERKAKCRDGRKAVSVTPPKQQP 161
BLAST of mRNA_Ecto-sp13_S_contig8114.19458.1 vs. uniprot
Match: A0A2P6VRN3_9CHLO (Tesmin TSO1-like CXC 5 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VRN3_9CHLO) HSP 1 Score: 153 bits (387), Expect = 2.480e-40 Identity = 71/125 (56.80%), Postives = 84/125 (67.20%), Query Frame = 1
Query: 118 CNCKKSKCLKLYCECFQRQQYCNGCNCVECLNTERTEDLRQLAIQGTIERNPQAFVSKFE-----RRAGKRSHNAGCNCKKSACLKKYCECFQAGVACGTNCKCVNCKNYEGAAGGRKRRAVESP 477
CNCK S+CLKLYCECF +YC+ CNC+ C N E RQ A++ +ERNP AF K R +G HN GCNCKKS CLKKYCECFQAG+AC NCKC++CKNYEG+ R A+ SP
Sbjct: 122 CNCKNSRCLKLYCECFASGRYCDACNCLNCHNNRAHESTRQAAVEAILERNPNAFRPKIAGGSEGRHSGGARHNKGCNCKKSGCLKKYCECFQAGIACSDNCKCLDCKNYEGS---EAREALLSP 243
BLAST of mRNA_Ecto-sp13_S_contig8114.19458.1 vs. uniprot
Match: E1ZBA8_CHLVA (CRC domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZBA8_CHLVA) HSP 1 Score: 154 bits (388), Expect = 3.050e-40 Identity = 68/112 (60.71%), Postives = 78/112 (69.64%), Query Frame = 1
Query: 118 CNCKKSKCLKLYCECFQRQQYCNGCNCVECLNTERTEDLRQLAIQGTIERNPQAFVSKF-----ERRAGKRSHNAGCNCKKSACLKKYCECFQAGVACGTNCKCVNCKNYEG 438
CNCK S+CLKLYCECF +YC+GCNC+ C N E RQ A++ +ERNP AF K RRAG HN GCNCKKS CLKKYCECFQAG+ C CKC++CKNYEG
Sbjct: 156 CNCKNSRCLKLYCECFASGRYCDGCNCLNCYNNREHEATRQSAVEAILERNPNAFRPKIAPGADNRRAGGARHNKGCNCKKSGCLKKYCECFQAGIVCSEICKCLDCKNYEG 267
BLAST of mRNA_Ecto-sp13_S_contig8114.19458.1 vs. uniprot
Match: A0A0M0JDD9_9EUKA (Tesmin tso1-like cxc domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JDD9_9EUKA) HSP 1 Score: 145 bits (367), Expect = 4.790e-40 Identity = 65/108 (60.19%), Postives = 77/108 (71.30%), Query Frame = 1
Query: 115 TCNCKKSKCLKLYCECFQRQQYCNGCNCVECLNTERTEDLRQLAIQGTIERNPQAF---VSKFERRAGKRSHNAGCNCKKSACLKKYCECFQAGVACGTNCKCVNCKN 429
TCNC+ S+CLKLYCECF QYC GCNC C N ++LR+ AI+ T+ERN QAF +S E+ + +HN GCNCKKS CLKKYCECFQAG+ C CKCVNC N
Sbjct: 36 TCNCRNSRCLKLYCECFASGQYCYGCNCQSCFNNPENDELRKQAIESTLERNQQAFRPKISSTEQASS--AHNRGCNCKKSGCLKKYCECFQAGIKCADTCKCVNCLN 141 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8114.19458.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8114.19458.1 >prot_Ecto-sp13_S_contig8114.19458.1 ID=prot_Ecto-sp13_S_contig8114.19458.1|Name=mRNA_Ecto-sp13_S_contig8114.19458.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=181bp PTPPLATKPASTSSGVKAETPAAVGVTGCGGGRDLLPVTCNCKKSKCLKLback to top mRNA from alignment at Ecto-sp13_S_contig8114:5178..5722+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8114.19458.1 ID=mRNA_Ecto-sp13_S_contig8114.19458.1|Name=mRNA_Ecto-sp13_S_contig8114.19458.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=545bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8114:5178..5722+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8114:5178..5722+ >mRNA_Ecto-sp13_S_contig8114.19458.1 ID=mRNA_Ecto-sp13_S_contig8114.19458.1|Name=mRNA_Ecto-sp13_S_contig8114.19458.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=543bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8114:5178..5722+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |