mRNA_Ecto-sp13_S_contig8092.19435.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8092.19435.1 vs. uniprot
Match: D7G7Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Z8_ECTSI) HSP 1 Score: 791 bits (2044), Expect = 1.720e-265 Identity = 416/445 (93.48%), Postives = 419/445 (94.16%), Query Frame = 1
Query: 1 EWGVLVDEDPTVRFTEAEYLPQSSQLKLDGVVLSVRVDNQTQDLELGEVKLSVDDVLTALPPGTVRYDQGVLQPNRILTTVMFNSTAPHALPAWVGELTARTFQACATNRGLEGGQASYTVRSHPLPLTATESLEVQTMLSLLVSLLVTIPLCYAPAAFVTFLVRERACKSKRVQLVSGASPLAYWASTYLWDALLFFVLTVLVMLTFAAYGKDASKVFMMRWDALLGTWGLLVSYGLSSLPLSYLYSFAFDGPSAAQISIAGVNFLSGFGFVVAYAVLSTLKRTVKFAAKAQHIFRLFPPYLLGDGLIRVSSEFYVREVIGMDREGGVLAWDVAGRGICYMCLEALAYLGLVSCLFQGLTPPGG-RAYADRLRLWLGGWSDRDLSEMLRASRGPGEDKDVKEERDKVCRAMARASGGRVVGVEQGDEEEE--VDTVLISDLTKV 1326
EW VLVDEDPTVRFTEAEYLPQSSQLKLDGVVLSVRVDNQTQDLELGEVKLSVDDVLTALPPGTVRYDQGVLQPNRILTTVMFNSTAPHALPAWVGELTARTFQACATNRGLEGGQASYTVRSHPLPLTATESLEVQTMLSLLVSLLVTIPLCYAPAAFVTFLVRERACKSKRVQLVSGASPLAYWASTYLWDALLFFVLTVLVMLTFAAYGKDASKVFMMRWDALLGTWGLL+SYGLSSLPLSYLYSFAFDGPSAAQISIAGVNFLSGFGFVVAYAVLSTLKRTVKFAAKAQHIFRLFPPYLLGDGLIRVSSEFYVREV+GMDREGGVLAWDVAGRGICYMCLEALAYLGLV L +P G RAYADRLRLWLGGWSDRDL EMLRASRGPGEDKDVKEERDKVCRAMARASGG VDTVLISDLTKV
Sbjct: 1329 EWLVLVDEDPTVRFTEAEYLPQSSQLKLDGVVLSVRVDNQTQDLELGEVKLSVDDVLTALPPGTVRYDQGVLQPNRILTTVMFNSTAPHALPAWVGELTARTFQACATNRGLEGGQASYTVRSHPLPLTATESLEVQTMLSLLVSLLVTIPLCYAPAAFVTFLVRERACKSKRVQLVSGASPLAYWASTYLWDALLFFVLTVLVMLTFAAYGKDASKVFMMRWDALLGTWGLLLSYGLSSLPLSYLYSFAFDGPSAAQISIAGVNFLSGFGFVVAYAVLSTLKRTVKFAAKAQHIFRLFPPYLLGDGLIRVSSEFYVREVMGMDREGGVLAWDVAGRGICYMCLEALAYLGLV--LVVEYSPAAGVRAYADRLRLWLGGWSDRDLIEMLRASRGPGEDKDVKEERDKVCRAMARASGGXXXXXXXXXXXXXXXVDTVLISDLTKV 1771
BLAST of mRNA_Ecto-sp13_S_contig8092.19435.1 vs. uniprot
Match: A0A6H5KGR1_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGR1_9PHAE) HSP 1 Score: 548 bits (1413), Expect = 2.640e-190 Identity = 290/311 (93.25%), Postives = 293/311 (94.21%), Query Frame = 1
Query: 415 MLSLLVSLLVTIPLCYAPAAFVTFLVRERACKSKRVQLVSGASPLAYWASTYLWDALLFFVLTVLVMLTFAAYGKDASKVFMMRWDALLGTWGLLVSYGLSSLPLSYLYSFAFDGPSAAQISIAGVNFLSGFGFVVAYAVLSTLKRTVKFAAKAQHIFRLFPPYLLGDGLIRVSSEFYVREVIGMDREGGVLAWDVAGRGICYMCLEALAYLGLVSCLFQGLTPPGG-RAYADRLRLWLGGWSDRDLSEMLRASRGPGEDKDVKEERDKVCRAMARASGGRVVGVEQGDE-EEEVDTVLISDLTKVGSHGC 1341
MLSLLVSLLVTIPLCYAPAAFVTFLVRERACKSKRVQLVSGASPLAYWASTYLWDALLFFVLTVLVMLTFAAYGKDASKVFMMRWDALLGTWGLLVSYGLSSLPLSYLYSFAFDGPSAAQISIAGVNFLSGFGFVVAYAVLSTLKRTVKFAAKAQHIFRLFPPYLLGDGLIRVSSEFYVREV+GMDREGGVLAWDVAGRGICYMCLEALAYLGLV L +P G RAYADR RLWLGGWSDRDL EMLRASRGPGEDKDVK+ERDKVCRAMARASG VVG EQ DE EEEVDTVLISDLTKVGS C
Sbjct: 1 MLSLLVSLLVTIPLCYAPAAFVTFLVRERACKSKRVQLVSGASPLAYWASTYLWDALLFFVLTVLVMLTFAAYGKDASKVFMMRWDALLGTWGLLVSYGLSSLPLSYLYSFAFDGPSAAQISIAGVNFLSGFGFVVAYAVLSTLKRTVKFAAKAQHIFRLFPPYLLGDGLIRVSSEFYVREVMGMDREGGVLAWDVAGRGICYMCLEALAYLGLV--LVVEYSPAAGVRAYADRRRLWLGGWSDRDLIEMLRASRGPGEDKDVKKERDKVCRAMARASGSEVVGGEQQDEDEEEVDTVLISDLTKVGSDVC 309
BLAST of mRNA_Ecto-sp13_S_contig8092.19435.1 vs. uniprot
Match: A0A482RV75_9ARCH (ATP-binding cassette domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RV75_9ARCH) HSP 1 Score: 236 bits (602), Expect = 2.090e-65 Identity = 129/308 (41.88%), Postives = 187/308 (60.71%), Query Frame = 1
Query: 151 LSVDDVLTALPPGTVRYDQGVLQPNRILTTVMFNSTAPHALPAWVGELTARTFQACATNRGLEGGQASYTVRSHPLPLTATESLEVQTMLSLLVSLLVTIPLCYAPAAFVTFLVRERACKSKRVQLVSGASPLAYWASTYLWDALLFFVLTVLVMLTFAAYGKDASKVFMMRWDALLGTWGLLVSYGLSSLPLSYLYSFAFDGPSAAQISIAGVNFLSGFGFVVAYAVLSTLKRTVKFAAKAQHIFRLFPPYLLGDGLIRVSSEFYVREVIGMDREGGVLAWDVAGRGICYMCLEALAYLGLVSCLFQ 1074
++ +D+ LP G Y+ + P+R TV+ N+T+PHA+ AW GEL FQ C N A Y V++HPLPLT ESL ++ +LS+L S+ + +PLCY PAAFV+FLVRER K K +Q+ SG SP YW TYLWD LF +L +++ F GK +S VF+ ++ L L++ YG S++PL+YLYSF F S AQIS+ +NF++GF V+AY V+ + T A HIFR FP Y +G+G I +S+ ++ ++G +R W+V GR + +M EA+ Y GL+ L +
Sbjct: 542 VTYEDIEPFLPDGRQTYN--LTLPSRY--TVLHNTTSPHAVAAWEGELVESAFQTCQNNP-----DAEYYVKNHPLPLTTQESLTIRVILSVLTSIFILVPLCYIPAAFVSFLVRERVTKCKHLQITSGVSPALYWVGTYLWDMTLFCILAGFILIAFYIVGKSSSSVFVGDAESNLAVLCLVLVYGASAIPLNYLYSFGFSNYSTAQISLTLLNFMTGFVLVMAYFVMYNIPETKAAAVVLVHIFRFFPAYNIGEGFINLSTTYFENAILGGNRSP--FHWEVCGRCLVFMFAEAIGY-GLMVILSE 837
BLAST of mRNA_Ecto-sp13_S_contig8092.19435.1 vs. uniprot
Match: A0A7S3DQC5_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DQC5_9STRA) HSP 1 Score: 216 bits (549), Expect = 9.430e-58 Identity = 139/372 (37.37%), Postives = 209/372 (56.18%), Query Frame = 1
Query: 7 GVLVDED-PTV-RFTEAEYLPQSSQLKLDGVVLSVRVDNQTQDLELGEVKLSVDDVLTALPPGTVRYDQGVLQPNRILTTVMFNSTAPHALPAWVGELTARTFQACATNRGLEGGQASYTVRSHPLPLTATESLEVQTMLSLLVSLLVTIPLCYAPAAFVTFLVRERACKSKRVQLVSGASPLAYWASTYLWDALLFFVLTVLVMLTFAAYGKDASKVFMMRWDALLGTWGLLVSYGLSSLPLSYLYSFAFDGPSAAQISIAGVNFLSGFGFVVAYAVLSTLKRTVKFAAKAQHIFRLFPPYLLGDGLIRVSSEFYVREVIGMDREGGVLAWDVAGRGICYMCLEALAYLGLVSCLFQGLTPPGGRAYADRL 1116
GV +DE+ P V + + P S + ++ V + + + ++ V LS + P G Y V + ++++ NS++PHA+ + F++C A +HPLPLT +SLE++T+LS+L S+ + IP C+ P AF+ FLVRE+A KSK +QLVSG + AYW S Y +D FF+LTVLVM F YGKDA++VF+ W+A T L YGLS LP +YL + FD S+AQI++ GV F+SGF V AY ++ ++++T A + +FRL+P Y +GDGLI +S F+ REV+ +E L WDVAG+ + + A+ Y ++ LF + GG RL
Sbjct: 573 GVELDEEIPIVLESSSVSFHPSESIVSFSDLI--VTLGSLEFESDVVNVSLSPSSFSESAPTGEETYTFDV----QAESSILHNSSSPHAVATFNQHYADFVFKSCIGKTS-----ARLVSENHPLPLTTQQSLEIKTILSVLASMFILIPYCFIPGAFIVFLVREKASKSKHLQLVSGTNITAYWMSAYFYDVSRFFLLTVLVMAVFLMYGKDAAQVFVGTWEAFGCTALLTFGYGLSVLPFAYLLARRFDNHSSAQIAVIGVIFISGFVAVNAYYIMDSIEKTRSIAQTLRPLFRLWPAYNVGDGLIAMSRAFWEREVLF--QENSPLDWDVAGKPLGLLYGLAIPYFLML--LFVEFSHEGGAGGIGRL 929
BLAST of mRNA_Ecto-sp13_S_contig8092.19435.1 vs. uniprot
Match: A0A7S2BNJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BNJ9_9STRA) HSP 1 Score: 196 bits (498), Expect = 2.340e-54 Identity = 105/274 (38.32%), Postives = 161/274 (58.76%), Query Frame = 1
Query: 238 TVMFNSTAPHALPAWVGELTARTFQACA-TNRGLEGGQASYTVRSHPLPLTATESLEVQTMLSLLVSLLVTIPLCYAPAAFVTFLVRERACKSKRVQLVSGASPLAYWASTYLWDALLFFVLTVLVMLTFAAYGKDASKVFMMRWDALLGTWGLLVSYGLSSLPLSYLYSFAFDGPSAAQISIAGVNFLSGFGFVVAYAVLSTLKRTVKFAAKAQHIFRLFPPYLLGDGLIRVSSEFYVREVIGMDREGGVLAWDVAGRGICYMCLEALAYLGL 1056
T++FNS++ H+ + G + + + C T G G +Y V +HPLP+T +S+ ++ +LS+L SL I LCY PA+F TF+V+ER+CK+K +QL SG S AYW STYLWD LL+ +V F +G+ + VF+ + L+ YG++ LPL+Y Y+FAF+ P +AQI+I G+NF++GF FV VL+ + F + +F PPY G+GL+ + S Y E+ G + L W +G+ I + +EA+ Y GL
Sbjct: 57 TLLFNSSSWHSRFIFGGLVNSMVYDECGVTAHGATSGDWNYVVHNHPLPITYEQSISIRGLLSILTSLFFLIVLCYVPASFATFVVKERSCKAKHIQLCSGVSIQAYWLSTYLWDLLLYTAFAGMVTAIFFCFGRQYAGVFIYPATTGFTLFILIWFYGVACLPLNYCYTFAFENPPSAQIAIMGINFVTGFCFVTLRNVLNAIGDPEGFLTFFEPVFHTLPPYNFGEGLMTLVSTSYTNEISGSNIS--TLGWGASGKSIFLLAVEAVVYFGL 328
BLAST of mRNA_Ecto-sp13_S_contig8092.19435.1 vs. uniprot
Match: A0A2K1KQ83_PHYPA (Uncharacterized protein n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KQ83_PHYPA) HSP 1 Score: 205 bits (521), Expect = 5.210e-54 Identity = 131/374 (35.03%), Postives = 195/374 (52.14%), Query Frame = 1
Query: 205 QGVLQPNRILTTVMFNSTAPHALPAWVGELTARTFQACATNRGLEGGQASYTVRSHPLPLTATESLEVQTMLSLLVSLLVTIPLCYAPAAFVTFLVRERACKSKRVQLVSGASPLAYWASTYLWDALLFFVLTVLVMLTFAAYGKDASKVFMMRWDALLGTWGLLVSYGLSSLPLSYLYSFAFDGPSAAQISIAGVNFLSGFGFVVAYAVLSTLKRTVKFAAKAQHIFRLFPPYLLGDGLIRVSSEFYVREVIGMDREGGVLAWDVAGRGICYMCLEALAYLGLVSCLFQGLTPPGGRAYADRLRLWLGGWSDRDLSEMLRASRGPGEDKDVKEERDKVCRAMARASGGRVVGVEQGDEEEEVDTVLISDLTKV 1326
QG+ P T++FN+++ H+LPA V EL +A N A+ V +HPLPLT TE LE+QT+LS+L +L V IP CY A++ F+VRER K+K +Q+VSGAS +AYW +TY WD + + L ML F Y K F+ W T +L+S+G S +PL+Y YSF F + AQ++IAG++FL+GFG +V V+ + T K H++ LFPP+ LG L+++S+ + +V+G + WD+ GR + YM +E Y+ L + G D + S+ R + + +KE+ D VC R GG+ DTV++ L KV
Sbjct: 1236 QGIFSP----VTLLFNTSSDHSLPALVQELMQTRLKANLVN-----SSATMKVSNHPLPLTKTEFLEIQTVLSVLAALFVLIPFCYLGASYAVFVVRERVVKAKLLQMVSGASCVAYWTATYTWDLITYAATLALTMLIFELY---QDKSFVGSWSKAGATLSVLMSFGASVIPLTYCYSFGFLNHANAQVAIAGIHFLTGFGMLVGSLVMGEIDETKALNEKLVHLYHLFPPFNLGRSLVQLSALDFRDQVLG--KPSDPFKWDILGRPLTYMIVEIFGYMVLTILIDNGTLRRSSDLVWDFVS---------QASQESRLADSLSDKLPLKEDVD-VCNERKRVEGGQA----------RSDTVVVQGLRKV 1575
BLAST of mRNA_Ecto-sp13_S_contig8092.19435.1 vs. uniprot
Match: B7G9E6_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G9E6_PHATC) HSP 1 Score: 196 bits (497), Expect = 7.610e-51 Identity = 107/290 (36.90%), Postives = 177/290 (61.03%), Query Frame = 1
Query: 238 TVMFNSTAPHALPAWVGELTARTFQACATNRGLEGGQASYTVRS--HPLPLTATESLEVQTMLSLLVSLLVTIPLCYAPAAFVTFLVRERACKSKRVQLVSGASPLAYWASTYLWDALLFFVLTVLVMLTFAAYGKDASKVFMMRWDALLGTWGLLVSYGLSSLPLSYLYSFAFDGPSAAQISIAGVNFLSGFGFVVAYAVLSTLKRTVKFAAKAQHIFRLFPPYLLGDGLIRVSSEFYVREVIGMDREGGVLAWDVAGRGICYMC-LEALAYLGLVSCLFQGLTPPGGR 1098
+++ NS++PHA+ + + C+ G+ ++S PLPLT +++E++ +LS+L SL + IP CY P AF+ F+V+E++CKSK +QLVSG +YW S Y +DA +F +LT+LVM F YG D+++VF+ ++ T L YGLS LP +YL S F S+AQI++ G+ F++GF FV+AY ++ +++ T + A + IFR+FP Y +GDG I++++ F+ R + G D G +W+VAG+ + + L + +L L+ + G GG+
Sbjct: 1218 SILHNSSSPHAVAVFNQAYADHILKVCS-------GEPKRILQSLNAPLPLTTAQTVEIKAILSILASLFLLIPYCYIPGAFIVFMVKEKSCKSKHLQLVSGVDVRSYWISNYAFDASVFLLLTLLVMAVFMFYGSDSAEVFVGDLESFFCTMALTFGYGLSILPFAYLCSRRFHNHSSAQIAVIGIGFVTGFVFVMAYFIMISIESTEQLAKTLRPIFRIFPGYNVGDGFIQMANAFWERRIQGTD-SGRPFSWEVAGKPVLLLYGLAPIYFLILLILEYSGDGSAGGK 1499
BLAST of mRNA_Ecto-sp13_S_contig8092.19435.1 vs. uniprot
Match: A0A482RS57_9ARCH (ATP-binding cassette domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RS57_9ARCH) HSP 1 Score: 189 bits (481), Expect = 5.300e-49 Identity = 114/303 (37.62%), Postives = 165/303 (54.46%), Query Frame = 1
Query: 187 GTVRYDQGVLQPNRILTTVMFNSTAPHALPAWVGELTARTFQACATNRGLEGGQASYTVRSHPLPLTATESLEVQTMLSLLVSLLVTIPLCYAPAAFVTFLVRERACKSKRVQLVSGASPLAYWASTYLWDALLFFVLTVLVMLTFAAYGKDASKVFMMRWDALLGTWGLLVSYGLSSLPLSYLYSFAFDGPSAAQISIAGVNFLSGFGFVVAYAVLSTLKRTVKFAAKAQHIFRLFPPYLLGDGLIRVSSEFYVREVIGMDREGGVLAWDVAGRGICYMCLEALAYLGLV----SCLFQGLT 1083
GT Y+ V +P TV+ N+T+PHA+ AW GEL + FQ C N ASY V +HP+P T + L+ + LSLL S+ + +PL +PA++V F+V+E+A K +Q+ SG SP YW STY WD F VL + V++ F G + VF+ + L++SYG S++PL+Y+YSFAFD S AQI++ +NF++GF V+ LLG+ LI +++ + + G R V W VAGR + +M LEA+ YLGLV S L + LT
Sbjct: 492 GTGNYNFTVQRPY----TVLHNTTSPHAIAAWQGELVQQVFQTCTGNP-----TASYIVHNHPIPQTRSTLLKNRVFLSLLTSIFILVPLSQSPASYVAFVVKEKATKCTHLQMASGVSPSIYWLSTYFWDMTSFIVLALCVLVAFFVVGPGNASVFVGTSETSTCVLLLILSYGASAIPLNYIYSFAFDNFSTAQITVMLINFMTGFVLVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLGEALINLTTAYLQNTLRG--RHISVFTWTVAGRSLAFMLLEAVGYLGLVLLSESALIKELT 783
BLAST of mRNA_Ecto-sp13_S_contig8092.19435.1 vs. uniprot
Match: A0A836CL79_9STRA (ABC-2 family transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL79_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.220e-47 Identity = 90/164 (54.88%), Postives = 112/164 (68.29%), Query Frame = 1
Query: 265 HALPAWVGELTARTFQACATNRGLEGGQASYTVRSHPLPLTATESLEVQTMLSLLVSLLVTIPLCYAPAAFVTFLVRERACKSKRVQLVSGASPLAYWASTYLWDALLFFVLTVLVMLTFAAYGKDASKVFMMRWDALLGTWGLLVSYGLSSLPLSYLYSFAFD 756
H LP W+G+LT ++ C N QASYT R+HPLP+TA ES+E QT+LS+L L + IPLCYAPAAFVTF+VRERA KSKR+QL+SGASPL+YW +TYLWD LF VL M YG+ A++ F+ ++ L V YG S LPL YLY+F FD
Sbjct: 3 HGLPGWLGQLTELKYRTCLNNE-----QASYTARTHPLPVTAQESIETQTILSVLACLFIIIPLCYAPAAFVTFVVRERATKSKRLQLMSGASPLSYWLATYLWDVTLFMVLAAACMGCLYTYGQHAARCFVELSESAGAMALLFVLYGFSVLPLCYLYTFMFD 161
BLAST of mRNA_Ecto-sp13_S_contig8092.19435.1 vs. uniprot
Match: A0A2R6WXZ6_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WXZ6_MARPO) HSP 1 Score: 181 bits (459), Expect = 7.640e-46 Identity = 120/339 (35.40%), Postives = 178/339 (52.51%), Query Frame = 1
Query: 238 TVMFNSTAPHALPAWVGELTARTFQACATNRGLEGGQASYTVRSHPLPLTATESLEVQTMLSLLVSLLVTIPLCYAPAAFVTFLVRERACKSKRVQLVSGASPLAYWASTYLWDALLFFVLTVLVMLTFAAYGKDASKVFMMRWDALLGTWGLLVSYGLSSLPLSYLYSFAFDGPSAAQISIAGVNFLSGFGFVVAYAVLSTLKRTVKFAAKAQHIFRLFPPYLLGDGLIRVSS-EFYVREVIGMDREGGVLAWDVAGRGICYMCLEALAYLGLVSCLFQGLTPPGGRAYADRLRLWLGGWSDRDLSEMLRASRGPG-----EDKDVKEERDKVCRAMA 1236
T++ N+++ HA+P + EL + L AS + + PLPLT E+L +Q ML++L +L + IP CY A+F F+VRER K+K +Q++SGA+ +YW +TY WD L + + + ML F Y A F+ W + LL+S+GLS LPLSY YSFAF + AQ++IAG++F++GF +VA V+ L T + IF+LFPPY LG GL+ +S+ + V G + W V GR I M +EA+ Y+ L + + R + S L A+ G ED+DV ER++V MA
Sbjct: 1282 TLLHNTSSEHAMPTLIQELAQARLR-----EALNLSTASMKLSNSPLPLTKNEALRIQVMLTVLAALFILIPFCYLAASFAVFVVRERVVKAKLLQMLSGANTYSYWTATYCWDILNYIAIVGITMLVFVLYRDQA---FIGSWTKAGAVFVLLISFGLSVLPLSYCYSFAFTSHANAQVAIAGIHFVTGFVTLVASTVMGALPETKELNRYLVQIFQLFPPYNLGRGLVTLSAMDLQSTFVHG---HPNLYRWGVLGRPITLMLMEAVGYMLLTLTIDNDWLTSIWKLVVKFSR------KRKSTSSSLHAAAANGDLSSPEDEDVHSERERVESGMA 1603 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8092.19435.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8092.19435.1 >prot_Ecto-sp13_S_contig8092.19435.1 ID=prot_Ecto-sp13_S_contig8092.19435.1|Name=mRNA_Ecto-sp13_S_contig8092.19435.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=450bp EWGVLVDEDPTVRFTEAEYLPQSSQLKLDGVVLSVRVDNQTQDLELGEVKback to top mRNA from alignment at Ecto-sp13_S_contig8092:2..6576+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8092.19435.1 ID=mRNA_Ecto-sp13_S_contig8092.19435.1|Name=mRNA_Ecto-sp13_S_contig8092.19435.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6575bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8092:2..6576+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8092:2..6576+ >mRNA_Ecto-sp13_S_contig8092.19435.1 ID=mRNA_Ecto-sp13_S_contig8092.19435.1|Name=mRNA_Ecto-sp13_S_contig8092.19435.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1350bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8092:2..6576+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |