mRNA_Ecto-sp13_S_contig8090.19432.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8090.19432.1 vs. uniprot
Match: D7FTM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTM0_ECTSI) HSP 1 Score: 85.5 bits (210), Expect = 1.420e-18 Identity = 41/55 (74.55%), Postives = 48/55 (87.27%), Query Frame = 2
Query: 188 EEERVCEGRTLKRSNKSTFMGFLPFGKRGFLDRLARERAQAHVGEATLKLTSKGI 352
++ + EGRTLK+S STFMGFLPFGKRGFL R AR+RA+AH+GEATLKLTSKGI
Sbjct: 64 KKNALREGRTLKKSKMSTFMGFLPFGKRGFLHRRARDRAEAHLGEATLKLTSKGI 118
BLAST of mRNA_Ecto-sp13_S_contig8090.19432.1 vs. uniprot
Match: D7G9A5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A5_ECTSI) HSP 1 Score: 75.5 bits (184), Expect = 3.640e-15 Identity = 37/67 (55.22%), Postives = 46/67 (68.66%), Query Frame = 2
Query: 149 RGLSFRNHPAEVGEEERVCEGRTLKRSNKSTFMGFLPFGKRGFLDRLARERAQAHVGEATLKLTSKG 349
R L N A + +++ EG+TL+R +T MGFLPFGK GFL R ARE A+AHVGEATL +T KG
Sbjct: 5 RALRSENIAARLEKKKAALEGQTLRRGKVATLMGFLPFGKHGFLRRRAREHAEAHVGEATLSITKKG 71
BLAST of mRNA_Ecto-sp13_S_contig8090.19432.1 vs. uniprot
Match: D7G9B0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B0_ECTSI) HSP 1 Score: 75.5 bits (184), Expect = 1.520e-13 Identity = 37/67 (55.22%), Postives = 45/67 (67.16%), Query Frame = 2
Query: 149 RGLSFRNHPAEVGEEERVCEGRTLKRSNKSTFMGFLPFGKRGFLDRLARERAQAHVGEATLKLTSKG 349
R L N A + ++ EGRTL+R +T MGFLPFGK GFL R ARE A+AH+GEATL +T KG
Sbjct: 369 RALRSENIAARLEKKRAALEGRTLRRGKVATLMGFLPFGKHGFLRRRAREHAEAHMGEATLSITKKG 435
BLAST of mRNA_Ecto-sp13_S_contig8090.19432.1 vs. uniprot
Match: A0A6H5KKU9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKU9_9PHAE) HSP 1 Score: 67.4 bits (163), Expect = 1.070e-10 Identity = 33/56 (58.93%), Postives = 40/56 (71.43%), Query Frame = 2
Query: 182 VGEEERVCEGRTLKRSNKSTFMGFLPFGKRGFLDRLARERAQAHVGEATLKLTSKG 349
+G E + EGR LKRS + MG LPFGK GF R ARE A+AH+ EATLKLT++G
Sbjct: 474 LGRSEALREGRELKRSKMAAIMGVLPFGKNGFRRRRAREHAEAHLMEATLKLTNRG 529
BLAST of mRNA_Ecto-sp13_S_contig8090.19432.1 vs. uniprot
Match: A0A6H5L4D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4D4_9PHAE) HSP 1 Score: 66.6 bits (161), Expect = 1.870e-10 Identity = 32/55 (58.18%), Postives = 42/55 (76.36%), Query Frame = 2
Query: 188 EEERVC-EGRTLKRSNKSTFMGFLPFGKRGFLDRLARERAQAHVGEATLKLTSKG 349
E++RV EGRTL+ +T MGF+PFGK GFL R ARE +A++GEATL +T+KG
Sbjct: 311 EKKRVAREGRTLREGKLATLMGFMPFGKHGFLRRRAREHVEAYMGEATLSITNKG 365
BLAST of mRNA_Ecto-sp13_S_contig8090.19432.1 vs. uniprot
Match: D8LJ57_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ57_ECTSI) HSP 1 Score: 61.6 bits (148), Expect = 1.120e-8 Identity = 33/68 (48.53%), Postives = 42/68 (61.76%), Query Frame = 2
Query: 149 RGLSFRNHPAEVGEEERVCEGRTLKRSNK-STFMGFLPFGKRGFLDRLARERAQAHVGEATLKLTSKG 349
+GL A + + + EGR L + K + MGFLP GK GF R ARE A+AH+GEATL LT+KG
Sbjct: 398 QGLRSEIFEANLEKRKAALEGRELPKKGKVAALMGFLPLGKNGFRRRRAREHAEAHLGEATLSLTTKG 465
BLAST of mRNA_Ecto-sp13_S_contig8090.19432.1 vs. uniprot
Match: A0A6H5KH58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH58_9PHAE) HSP 1 Score: 59.7 bits (143), Expect = 5.400e-8 Identity = 30/48 (62.50%), Postives = 35/48 (72.92%), Query Frame = 2
Query: 206 EGRTLKRSNKSTFMGFLPFGKRGFLDRLARERAQAHVGEATLKLTSKG 349
EGR LKRS + M LPFGK GF R ARE A+AH+ EATLKLT++G
Sbjct: 552 EGRELKRSKVAAIMSALPFGKNGFRRRRAREHAEAHLMEATLKLTNRG 599
BLAST of mRNA_Ecto-sp13_S_contig8090.19432.1 vs. uniprot
Match: D8LNB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB2_ECTSI) HSP 1 Score: 57.0 bits (136), Expect = 1.300e-7 Identity = 29/48 (60.42%), Postives = 33/48 (68.75%), Query Frame = 2
Query: 206 EGRTLKRSNKSTFMGFLPFGKRGFLDRLARERAQAHVGEATLKLTSKG 349
EG LKRS + G LPFGK GF R RE A+AH+ EATLKLT+KG
Sbjct: 70 EGGELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLMEATLKLTNKG 117
BLAST of mRNA_Ecto-sp13_S_contig8090.19432.1 vs. uniprot
Match: A0A6H5K5J3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5J3_9PHAE) HSP 1 Score: 58.5 bits (140), Expect = 1.380e-7 Identity = 29/48 (60.42%), Postives = 34/48 (70.83%), Query Frame = 2
Query: 206 EGRTLKRSNKSTFMGFLPFGKRGFLDRLARERAQAHVGEATLKLTSKG 349
EG LKRS + M LPFGK GF R ARE A+AH+ EATLKLT++G
Sbjct: 571 EGHELKRSKMAAIMSVLPFGKNGFRRRRAREHAEAHLMEATLKLTNRG 618
BLAST of mRNA_Ecto-sp13_S_contig8090.19432.1 vs. uniprot
Match: D8LNB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB6_ECTSI) HSP 1 Score: 55.8 bits (133), Expect = 1.210e-6 Identity = 28/48 (58.33%), Postives = 33/48 (68.75%), Query Frame = 2
Query: 206 EGRTLKRSNKSTFMGFLPFGKRGFLDRLARERAQAHVGEATLKLTSKG 349
EG LKRS + G LPFGK GF R RE A+AH+ EATLKLT++G
Sbjct: 518 EGGELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLMEATLKLTNRG 565 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8090.19432.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8090.19432.1 >prot_Ecto-sp13_S_contig8090.19432.1 ID=prot_Ecto-sp13_S_contig8090.19432.1|Name=mRNA_Ecto-sp13_S_contig8090.19432.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=37bp MVYAAPADGSVVFATSTGRVPRDEEGRATGPSRRSA*back to top mRNA from alignment at Ecto-sp13_S_contig8090:1793..2146+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8090.19432.1 ID=mRNA_Ecto-sp13_S_contig8090.19432.1|Name=mRNA_Ecto-sp13_S_contig8090.19432.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=354bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8090:1793..2146+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8090:1793..2146+ >mRNA_Ecto-sp13_S_contig8090.19432.1 ID=mRNA_Ecto-sp13_S_contig8090.19432.1|Name=mRNA_Ecto-sp13_S_contig8090.19432.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=111bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8090:1793..2146+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |