mRNA_Ecto-sp13_S_contig7993.19295.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7993.19295.1
Unique NamemRNA_Ecto-sp13_S_contig7993.19295.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7993.19295.1 vs. uniprot
Match: A0A6H5KCE8_9PHAE (EngB-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCE8_9PHAE)

HSP 1 Score: 561 bits (1446), Expect = 1.580e-186
Identity = 343/370 (92.70%), Postives = 350/370 (94.59%), Query Frame = 1
Query:    1 LEEIARNALSQDVMEQEEEMEAAGSRRTGRKNRNKAEPAAQSDDLSDLDMYFDKQSDWRDSSSSAAPTTPAGPLPSGGEAAGRRRGKAVEGDDLAAQLAAGLGLNVVAPSSSRPSTGTEEEAATAMHETDGRYQDXXXXXXXXXXXXXEDSAGARLGGWFNDGQNASRRERTRAIRKEEKEGKSAEKVIAMVVSVAERDGVRDDRYFSFALKTLARMGRLDLSLRVNEMRETYLQDGELESHDRMTTAGLAVACLRAGDETSALEMLESAVKPCSSSMPEENEELYVEEXXXXXXXXXXXXXXXXXXXDWEALEAEEELEKIVEAEGEVLPELLDFYLERGQKESSQEAAAGLRKTIDRALRQGDFAPSS 1110
            LEEIARNALSQDVMEQEEE+EAAGSRRTGRKNRNKAEPAAQSDDLSDLDMYFDKQSDWRDSSSSAAPTTPAGPLPS G+AAGRRRGK VEGDDLAAQLAAGLGLNVVAPSSSRPSTGTEEEAATAMHETDGRYQDXXXXXXXXXXXX ED+AGARLGGWFNDGQNASRRERTRAIRKEEKEGKSAEKVIAMVVS AERDGVRDDRYFSFALKTLARMGRLDLSLRVNEMRETYLQDGELESHDRMTTAGLAVACLRAGDETSALEMLESAVKP SSS+PE+NEEL VEE  XXXXXXXXXXXXX     WEALEA EELEKI+EAEGEVLPELLDFYLERGQKESSQEAAAG+R     ALR GDFAPSS
Sbjct:  139 LEEIARNALSQDVMEQEEEIEAAGSRRTGRKNRNKAEPAAQSDDLSDLDMYFDKQSDWRDSSSSAAPTTPAGPLPSSGKAAGRRRGKVVEGDDLAAQLAAGLGLNVVAPSSSRPSTGTEEEAATAMHETDGRYQDXXXXXXXXXXXXDEDNAGARLGGWFNDGQNASRRERTRAIRKEEKEGKSAEKVIAMVVSAAERDGVRDDRYFSFALKTLARMGRLDLSLRVNEMRETYLQDGELESHDRMTTAGLAVACLRAGDETSALEMLESAVKPYSSSIPEQNEELQVEEEAXXXXXXXXXXXXX-----WEALEAAEELEKILEAEGEVLPELLDFYLERGQKESSQEAAAGVR-----ALRHGDFAPSS 498          
BLAST of mRNA_Ecto-sp13_S_contig7993.19295.1 vs. uniprot
Match: A0A836C7W4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7W4_9STRA)

HSP 1 Score: 218 bits (554), Expect = 5.570e-61
Identity = 136/303 (44.88%), Postives = 169/303 (55.78%), Query Frame = 3
Query: 1179 LTVWAYNQLIRRLGKADRLSDVFEVLDGMARLGVENNHETLEFATNAAIKEVEFETRAVSMKTLPSGKAALPEVVFVGRSNVGKSSLVNMLVNRKTLAPTSAVPGFTQHFNYYAVNKGRRKSPSFFLVDVPGLGYARADDGRMDSWKSTLQRYLGVRENLRVVFHLIDGRTGMQKADEQLISLMMD----------------------ENEGRSS--------------------------YVVVVTKCDKVNDKKLKGVTEKVRQTLDKNGFPKTTPVIPTSAKSRQGRVELLGYLRLVFDV 1943
            L   A N LIR LG+ D LSDVF +LD M    V+ + ET EF  NAA+KEV FE  AVSMKTLP      PE++FVGRSNVGKSSLVNMLVNRK +APTS+ PGFT   N+Y+VN GR++     LVDVPGLG+A AD GR+DSW+STLQRYL VR  LR  FHLID R G Q+AD  L+++                         + EG SS                          YV+V+TK D+V   +L+    +        G     PV+ +S+K+R GR  L    R ++DV
Sbjct:   17 LAATACNALIRHLGRVDLLSDVFALLDSMRAAKVKPDAETWEFVANAAVKEVAFECSAVSMKTLPP--PGPPEILFVGRSNVGKSSLVNMLVNRKAIAPTSSKPGFTTELNFYSVNAGRKRGLRCRLVDVPGLGFAEADAGRVDSWRSTLQRYLAVRAPLRCAFHLIDARDGPQRADRDLMAMXXXXXXXXXXXXXXXXXXXXXXXXXDGEGGSSXXXXXXXXXXXXXXXGSDYVRRQPPAYVIVLTKADRVAAPRLQMACAEAAXXXXXXGLGGDVPVLVSSSKTRTGRDVLW---RRLYDV 314          
BLAST of mRNA_Ecto-sp13_S_contig7993.19295.1 vs. uniprot
Match: R7Q9B2_CHOCR (EngB-type G domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9B2_CHOCR)

HSP 1 Score: 213 bits (541), Expect = 2.160e-57
Identity = 122/264 (46.21%), Postives = 164/264 (62.12%), Query Frame = 3
Query: 1149 SLSASPPSGALTVWAYNQLIRRLGKADRLSDVFEVLDGMARLGVENNHETLEFATNAAIKEVEFETRAVSMKTLPSGKAALPEVVFVGRSNVGKSSLVNMLVNRKTLAPTSAVPGFTQHFNYYAVNKGRRKSPSFFLVDVPGLGYARADDGRMDSWKSTLQRYLGVRENLRVVFHLIDGRTGMQKADEQLISLMMDENEGRSSYVVVVTKCDKVNDKKLK-GVTEKVRQTLDKNGFPKTTPVIPTSAKSRQGRVELLGYLRLVF 1937
            +L     + AL +  YN  IR LGK+  +  VF +LD M    VE N+ET EF  NAA+++V+F T AVSM TLP       EV FVGRSNVGKSSLVNML NRK LA  S  PG TQ FNY+ VN   ++S  F++VD+PG+GYAR      ++W   +++YL  R +LR++FHLIDGR G    DEQL+ L+      +  YVVV TK DK++ +KLK  V  + R  L +NG    TP++ +S+ +R GR E+  +L+ V 
Sbjct:  198 TLPIQDDAAALPIKEYNNCIRVLGKSRSMPGVFAILDLMKASKVEANNETYEFLANAAVRQVDFVTGAVSMDTLPP--PITTEVAFVGRSNVGKSSLVNMLCNRKALAYVSGTPGKTQQFNYFHVNAKDQES-QFYMVDLPGVGYARVPRPVQEAWIRFMEQYLQYRTSLRLIFHLIDGRHGAMTDDEQLMRLIAASGRQKGEYVVVFTKMDKMDKQKLKQAVINETRSALSRNGCRSDTPIVISSSSTRLGRDEMWRHLQSVL 458          
BLAST of mRNA_Ecto-sp13_S_contig7993.19295.1 vs. uniprot
Match: A0A7S1EK19_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EK19_HEMAN)

HSP 1 Score: 211 bits (536), Expect = 7.810e-57
Identity = 119/249 (47.79%), Postives = 159/249 (63.86%), Query Frame = 3
Query: 1185 VWAYNQLIRRLGKADRLSDVFEVLDGMARLGVENNHETLEFATNAAIKEVEFETRAVSMKTLPSGKAALPEVVFVGRSNVGKSSLVNMLVNRKTLAPTSAVPGFTQHFNYYAVNKGRRKSPSFFLVDVPGLGYARADDGRMDSWKSTLQRYLGVRENLRVVFHLIDGRTGMQKADEQLISLMMDENEGRSSYVVVVTKCDKVNDKKLKGVTEKVRQTLDKNGFPKTTPVIPTSAKSRQGRVELLGYLRL 1931
            V  YN LI++ GKA  L  VF VLD M   GVE + ETLEF +NAA++++EF   AVS+ TLP     LPE  F GRSNVGKSSLVNML NRK LA +S  PG TQ FNY+ VN        F LVD+PG+GYA+        W   L  YL  RE+L+V+FHL+D R G QK D +L+ L   E +  +++VVV+TK DK++ K  + + + VR  L + G  + TP++ TSA++++GR E+  YL+L
Sbjct:  121 VTTYNYLIKQFGKAGSLQGVFLVLDAMKEAGVEADAETLEFLSNAAVRQIEFVKGAVSVDTLPD---PLPEACFAGRSNVGKSSLVNMLSNRKKLAFSSKTPGKTQQFNYFVVNGQDDVGNKFHLVDLPGVGYAKVPVAVRREWVGFLTSYLTQRESLKVLFHLVDSRHGPQKDDLELMKLYA-ETKCSAAFVVVLTKIDKIDGKVRQSIVDGVRDALVECGCSRDTPILQTSAETKRGRDEVWNYLKL 365          
BLAST of mRNA_Ecto-sp13_S_contig7993.19295.1 vs. uniprot
Match: A0A2V3IQZ2_9FLOR (Putative GTP-binding protein EngB n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQZ2_9FLOR)

HSP 1 Score: 197 bits (501), Expect = 1.940e-51
Identity = 117/254 (46.06%), Postives = 157/254 (61.81%), Query Frame = 3
Query: 1170 SGALTVWAYNQLIRRLGKADRLSDVFEVLDGMARLGVENNHETLEFATNAAIKEVEFETRAVSMKTLPSGKAALPEVVFVGRSNVGKSSLVNMLVNRKTLAPTSAVPGFTQHFNYYAVNKGRRKSPSFFLVDVPGLGYARADDGRMDSWKSTLQRYLGVRENLRVVFHLIDGRTGMQKADEQLISLMMDENEGRSSYVVVVTKCDKVNDKKLK-GVTEKVRQTLDKNGFPKTTPVIPTSAKSRQGRVELLGYLR 1928
            + A+ +  YN  IR LGK   L  VFEVLD +    V+ ++ET EF  NAA+++V F   AVSM TLP    A  EV FVGRSNVGKSSLVNM+ NRK LA  S  PG TQ FNY+ VN+ R     F+LVD+PG+GYA+      + W   +++YL  R +LR+VFHLIDGR G    DEQL+  +    +G   YV+V+TK DK + ++ K  V +K R  L +NG     P++ TSA SR GR ++  +++
Sbjct:  251 NAAVEIGLYNTAIRMLGKNKMLESVFEVLDMVRLAQVKPDNETFEFLANAAVRQVRFVKGAVSMDTLPEPLGA--EVAFVGRSNVGKSSLVNMICNRKALAYVSGRPGKTQQFNYFLVNE-RSPETQFYLVDLPGVGYAKVPIPVKEEWLRFMRQYLKHRTSLRIVFHLIDGRHGALADDEQLMQEIAGYGKGLQ-YVLVLTKMDKADKQRAKRSVMDKTRAALVRNGCSPDIPIVLTSASSRLGRDDMWRHMQ 500          
BLAST of mRNA_Ecto-sp13_S_contig7993.19295.1 vs. uniprot
Match: A0A5J4Z606_PORPP (Putative GTP-binding protein EngB n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z606_PORPP)

HSP 1 Score: 193 bits (491), Expect = 1.530e-49
Identity = 117/284 (41.20%), Postives = 164/284 (57.75%), Query Frame = 3
Query: 1179 LTVWAYNQLIRRLGKADRLSDVFEVLDGMARLGVENNHETLEFATNAAIKEVEFETRAVSMKTLPSGKAALPEVVFVGRSNVGKSSLVNMLVNRKTLAPTSAVPGFTQHFNYYAVN-----------------------------------KGRRKSPSFFLVDVPGLGYARADDGRMDSWKSTLQRYLGVRENLRVVFHLIDGRTGMQKADE---QLISLMMDENEGRSSYVVVVTKCDKVNDKKLKG-VTEKVRQTLDKNGFPKTTPVIPTSAKSRQGRVEL 1913
            L +   N +IRRLGKA RL  +F +LD M   G+  N+E+ EF  NAA+++VEF T AVSM+TLP  +  LPE +FVGRSNVGKSSLVNM++ RK LA TS  PG TQ FNY+ VN                                   K    SP F++VD PG+GYA+      DSWK  ++ +L  RE+LR++FHL+DGR G    DE   Q+++ +    +  + YV+V+TK DK +  + K  V +  R  L+KNG  +  P++ TS+++R GR ++
Sbjct:  279 LMIETCNTMIRRLGKAGRLELIFLLLDAMHACGISTNNESYEFLANAAVRKVEFLTGAVSMETLP--ERTLPEAMFVGRSNVGKSSLVNMVLARKFLAHTSKRPGKTQQFNYFLVNDDAQAAPAIKTNKRALRRRELGHSAEQAQAQRAATKALPASPPFYIVDSPGVGYAKVSRPVQDSWKQFMRDFLTSRESLRLLFHLVDGRHGPLADDEELSQIVAALSRSGQFMAEYVIVLTKMDKTSKGRAKPRVVQSTRDLLEKNGL-QGVPIVSTSSETRLGRDDM 559          
BLAST of mRNA_Ecto-sp13_S_contig7993.19295.1 vs. uniprot
Match: A0A7S1EQV8_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQV8_9RHOD)

HSP 1 Score: 189 bits (480), Expect = 2.180e-48
Identity = 124/310 (40.00%), Postives = 168/310 (54.19%), Query Frame = 3
Query: 1152 LSASPPSGALTVWAYNQLIRRLGKADRLSDVFEVLDGMARLGVENNHETLEFATNAAIKEVEFETRAVSMKTLPSGKAALPEVVFVGRSNVGKSSLVNMLVNRKTLAPTSAVPGFTQHFNYYAVNKGR-------------------------RKSPS-------------------FFLVDVPGLGYARADDGRMDSWKSTLQRYLGVRENLRVVFHLIDGRTGMQKADEQLISLMMD--ENEGRSS--YVVVVTKCDKVNDKKLK-GVTEKVRQTLDKNGFPKTTPVIPTSAKSRQGRVELLGYLRLV 1934
            L +    G   V  YN++IR LGK   L+ VF+VLD M    ++ ++ET EF  NAA++ VEF    VSM T+P  +  LPE +F+GRSNVGKSSLVNM V RK LA TS  PG TQ FNY+ VN  +                         RK+P+                   F+LVD PG+GYA+      +SW   ++ +L     LRVVFHLIDGR G    D  L+ ++ D    E  SS  +V+V+TK DK++  K+K GV ++  Q L   G  ++TP+I TS++S+ GR E+  YLR V
Sbjct:  216 LKSENKDGESFVGIYNEVIRHLGKIGALNVVFDVLDVMNLANIQKDNETWEFLANAAVRRVEFVKGVVSMDTMPDQE--LPEAMFIGRSNVGKSSLVNMTVGRKALAHTSKRPGKTQQFNYFVVNGKKDAIEYKDKSVVKEQKKMSKRAMEKLRKNPNARGNLGRSERKEIKEDLKAFYLVDCPGVGYAKVPKEMQESWTRFIRDFLSKSSRLRVVFHLIDGRHGPMDDDRLLLEMVSDLKSKELMSSVQFVIVLTKVDKLDKSKVKSGVMQQTVQALKTVGLLESTPIISTSSQSKIGRDEMWRYLRSV 523          
BLAST of mRNA_Ecto-sp13_S_contig7993.19295.1 vs. uniprot
Match: A0A836C8M6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8M6_9STRA)

HSP 1 Score: 182 bits (461), Expect = 8.310e-48
Identity = 119/281 (42.35%), Postives = 164/281 (58.36%), Query Frame = 3
Query: 1176 ALTVWAYNQLIRRLGKADRLSDVFEVLDGMARLGVENNHETLEFATNAAIKEVEFETRAVSMKTLPSGKAALPEVVFVGRSNVGKSSLVNMLVNRKTLAPTSAVPGFTQHFNYYAVNKGRR-------KSPSFFLVDVPGLGYARADDGRMDSWKSTLQRYLGVRENLRVVFHLIDGRTGMQKADEQLISLMMDENEGRSSYVVVVTKCDKVNDKKLKGVTEKVRQTLDKNGFPKTTPVIPTSAKSRQGRVELLGYLRLVFDVDRRKGKGPAGAAAAGPPQ 1997
            A+++ A N+LIR   +   L  VF VLD M    V  N +T E   NAA++ VEF T AVSM+TLP  +  LPE  F+GRSNVGKSSLVNM+ NRK LA TS  PG TQ  N++ VN G         ++ +F+LVD+PG GYA+  +    SW+  L++Y+  R +LRV+FHL+DGR G    D+ ++  M       + YV+V+TK DK ++    GV       L + G  +  PV+ TSA+++ GR  +  YLRL   +DR  G    G AAA P +
Sbjct:   44 AISIDAANRLIRAAQRRRDLRAVFAVLDAMTAARVAPNDDTYEAVANAAVRSVEFVTGAVSMETLP--RKWLPEAAFIGRSNVGKSSLVNMVCNRKALAYTSKRPGKTQQLNFFEVNGGAAAAGAGDGEAHAFYLVDMPGHGYAKVSEQLRTSWQDLLKQYVAQRRSLRVLFHLLDGRHGPVGHDKAIMKEMA-RLPSYARYVIVLTKADKQDNTVSAGVMAATITALREAGV-ENAPVVITSAETKLGRDAMWRYLRLAA-LDRSGG----GRAAATPAE 315          
BLAST of mRNA_Ecto-sp13_S_contig7993.19295.1 vs. uniprot
Match: A0A6H5KPF6_9PHAE (EngB-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPF6_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 9.050e-48
Identity = 114/247 (46.15%), Postives = 153/247 (61.94%), Query Frame = 3
Query: 1191 AYNQLIRRLGKADRLSDVFEVLDGMARLGVENNHETLEFATNAAIKEVEFETRAVSMKTLPSGKAALPEVVFVGRSNVGKSSLVNMLVNRKTLAPTSAVPGFTQHFNYYAVNKGRRKSPSFFLVDVPGLGYARADDGRMDSWKSTLQRYLGVRENLRVVFHLIDGRTGMQKADEQLISLMMDENEGRSSYVVVVTKCDKVNDKKLKGVTEKVRQTLDKNGFPKTTPVIPTSAKSRQGRVELLGYLRL 1931
            A N+L++   K   L  VF+VLD MA  GV+ + ET E+  NAA++ V+F   AVSM TLP  +  LPE  F+GRSNVGKSSL+NM+ NRK LA TS  PG TQ FNY+ +N     S  F+LVD+PG+GYA+  + +   W +  + Y+  R +LRV+FHLIDGR G    D  ++ LM  E    + YVVV+TK DK ++   + V E V   L + G  +T PV+ TSA S+ GR  +  YLRL
Sbjct:  369 AANRLLQGFHKRRDLEAVFKVLDVMAAAGVDGDDETYEWLANAAVRGVDFVKGAVSMATLPK-EPVLPEAAFIGRSNVGKSSLINMVCNRKALAFTSKRPGKTQQFNYFLMNNNTENS--FYLVDLPGMGYAKVPEKQRKEWSTLFRSYITRRSSLRVLFHLIDGRHGPVGQDHAIMKLMA-ELPDTARYVVVLTKADKSDNSVSRQVLEGVVAALREAGVSRT-PVVLTSAASKLGRDGMWRYLRL 610          
BLAST of mRNA_Ecto-sp13_S_contig7993.19295.1 vs. uniprot
Match: A0A7S2FR04_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FR04_9STRA)

HSP 1 Score: 187 bits (474), Expect = 1.230e-47
Identity = 114/270 (42.22%), Postives = 157/270 (58.15%), Query Frame = 3
Query: 1146 SSLSASPPSGALTVWAYNQLIRRLGKADRLSDVFEVLDGMARLGVENNHETLEFATNAAIKEVEFETRAVSMKTLPSGKAALPEVVFVGRSNVGKSSLVNMLVNRKTLAPTSAVPGFTQHFNYYAVNKGRRKSPS--FFLVDVPGLGYARADDGRMDSWKSTLQRYLGVRENLRVVFHLIDGRTGMQKADEQLISLMMD-ENEGRSSYVVVVTKCDK--VNDKKLKGVTEKVRQTLDKN-GFPKTT--PVIPTSAKSRQGRVELLGYLRL 1931
            S  +   P   +++  +N+L++    A  L  +F ++D M+      N  T E   NAA++ V+F T AVSM TLP+    +PEV F+GRSNVGKSSLVNML NRK LA TS  PG TQ FNY+ +N+    +P   F +VD+PGLGYA+       +W   + +YL  RE LRVVFHL+D R G    DE++I LM       R  YV+V+TK DK  VN+K        V++ LD + G    +  P++ TS+ SR GR ++  YLRL
Sbjct:  253 SGRTTGQPVEPVSIELFNKLLKEFASARHLPALFHLMDVMSDTKAVANDITFEIVANAAVRSVDFVTSAVSMDTLPA--PLIPEVAFIGRSNVGKSSLVNMLCNRKALAYTSKTPGKTQQFNYFVINEASNWNPKCDFHMVDLPGLGYAKVPQAVRKNWVEFMTQYLEEREPLRVVFHLMDARLGPVAQDEEIIRLMEQISTRERFQYVIVLTKVDKKDVNEKGTLVAMASVQRALDDSFGVEAASQIPIVATSSISRLGRDQMWRYLRL 520          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7993.19295.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCE8_9PHAE1.580e-18692.70EngB-type G domain-containing protein n=2 Tax=Ecto... [more]
A0A836C7W4_9STRA5.570e-6144.88P-loop containing nucleoside triphosphate hydrolas... [more]
R7Q9B2_CHOCR2.160e-5746.21EngB-type G domain-containing protein n=1 Tax=Chon... [more]
A0A7S1EK19_HEMAN7.810e-5747.79Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A2V3IQZ2_9FLOR1.940e-5146.06Putative GTP-binding protein EngB n=1 Tax=Gracilar... [more]
A0A5J4Z606_PORPP1.530e-4941.20Putative GTP-binding protein EngB n=1 Tax=Porphyri... [more]
A0A7S1EQV8_9RHOD2.180e-4840.00Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A836C8M6_9STRA8.310e-4842.35P-loop containing nucleoside triphosphate hydrolas... [more]
A0A6H5KPF6_9PHAE9.050e-4846.15EngB-type G domain-containing protein n=2 Tax=Ecto... [more]
A0A7S2FR04_9STRA1.230e-4742.22Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7993contigEcto-sp13_S_contig7993:983..6830 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score550.4
Seed ortholog evalue7.4e-154
Seed eggNOG ortholog2880.D8LT72
Model size2307
Hectar predicted targeting categoryother localisation
Exons10
EggNOG free text desc.GTP binding
EggNOG OGsCOG0218@1,KOG2486@2759
Ec32 ortholog descriptionYihA5, YihA/EngB-like GTPase
Ec32 orthologEc-12_005510.1
Cds size1323
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7993.19295.1prot_Ecto-sp13_S_contig7993.19295.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7993 3371..6791 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464070.4397428-UTR-Ecto-sp13_S_contig7993:982..14871681464070.4397428-UTR-Ecto-sp13_S_contig7993:982..1487Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7993 983..1487 -
1681464070.450451-UTR-Ecto-sp13_S_contig7993:1947..20621681464070.450451-UTR-Ecto-sp13_S_contig7993:1947..2062Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7993 1948..2062 -
1681464070.4595072-UTR-Ecto-sp13_S_contig7993:2292..24771681464070.4595072-UTR-Ecto-sp13_S_contig7993:2292..2477Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7993 2293..2477 -
1681464070.468454-UTR-Ecto-sp13_S_contig7993:2850..29751681464070.468454-UTR-Ecto-sp13_S_contig7993:2850..2975Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7993 2851..2975 -
1681464070.4774473-UTR-Ecto-sp13_S_contig7993:3355..33701681464070.4774473-UTR-Ecto-sp13_S_contig7993:3355..3370Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7993 3356..3370 -
1681464070.5436537-UTR-Ecto-sp13_S_contig7993:6791..68301681464070.5436537-UTR-Ecto-sp13_S_contig7993:6791..6830Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7993 6792..6830 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464070.4867005-CDS-Ecto-sp13_S_contig7993:3370..36761681464070.4867005-CDS-Ecto-sp13_S_contig7993:3370..3676Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7993 3371..3676 -
1681464070.4961576-CDS-Ecto-sp13_S_contig7993:4125..44861681464070.4961576-CDS-Ecto-sp13_S_contig7993:4125..4486Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7993 4126..4486 -
1681464070.5077813-CDS-Ecto-sp13_S_contig7993:4834..49681681464070.5077813-CDS-Ecto-sp13_S_contig7993:4834..4968Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7993 4835..4968 -
1681464070.5171134-CDS-Ecto-sp13_S_contig7993:5419..57031681464070.5171134-CDS-Ecto-sp13_S_contig7993:5419..5703Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7993 5420..5703 -
1681464070.5262208-CDS-Ecto-sp13_S_contig7993:6181..63531681464070.5262208-CDS-Ecto-sp13_S_contig7993:6181..6353Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7993 6182..6353 -
1681464070.5350072-CDS-Ecto-sp13_S_contig7993:6725..67911681464070.5350072-CDS-Ecto-sp13_S_contig7993:6725..6791Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7993 6726..6791 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7993.19295.1

>prot_Ecto-sp13_S_contig7993.19295.1 ID=prot_Ecto-sp13_S_contig7993.19295.1|Name=mRNA_Ecto-sp13_S_contig7993.19295.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=441bp
MEQEEEMEAAGSRRTGRKNRNKAEPAAQSDDLSDLDMYFDKQSDWRDSSS
SAAPTTPAGPLPSGGEAAGRRRGKAVEGDDLAAQLAAGLGLNVVAPSSSR
PSTGTEEEAATAMHETDGRYQDDSEEEEEEMMMMDEDSAGARLGGWFNDG
QNASRRERTRAIRKEEKEGKSAEKVIAMVVSVAERDGVRDDRYFSFALKT
LARMGRLDLSLRVNEMRETYLQDGELESHDRMTTAGLAVACLRAGDETSA
LEMLESAVKPCSSSMPEENEELYVEEEEDEEEEVEVEEEEEEEEEDWEAL
EAEEELEKIVEAEGEVLPELLDFYLERGQKESSQEAAAGLRKTIDRALRQ
GDFAPSSAATTAATTPPRLLLYLLRHPRAPLPCGRTTSSSGGWARRTGCR
TCSRYWTAWPGSAWRTTTRRSSSPPTPPSRRWSSRPGLSP*
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mRNA from alignment at Ecto-sp13_S_contig7993:983..6830-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7993.19295.1 ID=mRNA_Ecto-sp13_S_contig7993.19295.1|Name=mRNA_Ecto-sp13_S_contig7993.19295.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5848bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7993:983..6830- (Ectocarpus species13 EcNAP12_S_4_19m)
CTGGAGGAGATTGCTAGAAACGCCCTGAGCCAAGACGTGATGGAGCAGGA GGAGGAAATGGAGGCTGCAGGCAGCCGCAGAACAGGCCGAAAAAACAGGA ACAAGGTGTGAAGATCCGATATCGGCCAGGGTTATGCTTGTGTTGGTCGG TTTGCCGATTAGGCTCATTTGCGATCTAACGTAGGCGAAACAGAGACGAA GCAGAATGCAAGACACCCAAGCTCTCACAATTTTTGATGGATTAGTCGAA GTGATCGGTGCGACAGACGGCTTTTCGCCCGTTATTTCGAGCTACTTCTA ACTCGCACAGGCTCGTGTGATGTTTGCTTTATCCATGCCCTACTTGCGTC GATTGGTGTAGAAAGTGATTATTTCACACCAGCTGTCAGACAACCAGCAA TGTTTCTTTCTTTACACTTTTACCCCAAAACCTTGTTGGACGGTTCATGC TCCCATTCCTCCCCCGAACGAGGCTAGGCTGAACCCGCCGCGCAGTCGGA CGATCTATCGGATCTGGACATGTATTTCGACAAGCAATCGGACTGGAGAG ACTCCTCGTCTTCAGCAGCACCAACAACACCCGCTGGCCCTCTCCCAAGT GGCGGAGAAGCCGCGGGTAGGCGGCGGGGCAAGGCAGTTGAAGGCGACGG TGAGAAAAGTAGAGGGAGGTGGGGGGAGTCGGGGAGAGGTATTATGTGTA GGGGTTTTGCTTGAGAGATTCATGTGTGTGTTTTCGTCCCTTTTAATACT CGCGCCAATCTTCACACCTCGTTGGTGCACTTCTTTTGAGAGTATTCGAT AGAGAATCGGAGAAAAGGGACAGGTACAAAGGCGGACAAGCAGATAGAGC TGAGTGTGAGCAGAGGGATCAAGATGACCGAGGGGAACACGGGAGAACAA GGCGAGAGGAGAGATTCAGCCGGGGAAAGAGATGCAAAATACAGGGACGA CCGAGACAGGAAGCACAAACCCGCTCTTCTTGCGCCGTTTATCACCGCCG CCTTTTTGGCCGGCAATAGAGTTTCACAACCATGCGTGCATACTGCCGCC GCCATGCACTCTGTGATCGGCGTTCTTGACCACCACCGCCGCCTACTAAC AAACAACGACAACAATGGTACCGATAGACTTGGCGGCACAACTAGCGGCG GGTCTGGGGCTCAACGTGGTGGCACCCTCCTCCTCCCGCCCTTCGACGGG CACCGAGGAGGAGGCGGCAACAGCAATGCACGAAACAGATGGGCGATACC AGGATGATAGCGAAGAGGAGGAGGAGGAGATGATGATGATGGACGAGGAC AGTGCCGGGGCACGGCTCGGCGGGTGGTTCAACGACGGGCAGAACGCCAG TCGGCGGGAGCGGACGCGGGCCATCCGCAAGGAGGAGAAGGAAGGGAAGA GCGCGGAGAAGGTATACGTCTGAAAGCAGGATGCGGTAGGCGGTCAATGA CCGAGAAGGACCAGAGATCGCAAAAGAAGAGTGCCGATTTTCTTCAGGAG GGTGTTGCTTCTCTCTATACCGGCTTTCTTCGTCGAAAGTCAAGGAGGCG TGTTCCTTCTACCCCTCTGGTGTCATAGGTACAGCGGTTGTTGGAGACGC AGGTTGGGTGAAGTGGAGCACTAGAACACTCTCTTCATGATGGTAAATAA TGGTCATTTGGTGCTCCTTCCGGTCTCGGTTCTTCCGTTGCTCTCCCTCT CCATGGACGTGCTGACCCACCGAGTTTTGAGCAAAACGTTATTTGTCTCT GCCACTCTATACGCTGCGGCTGGCGTGTTGATGCAGACCCCCTCGTCCTC CTCCTCCTCATGCCGCTCGTTTTCTTTCTGTGTTCGCCCTTCTGGTGGTG GGGTCCCCGTAGGTAATTGCTATGGTCGTCTCGGTGGCGGAGCGTGACGG AGTCCGCGACGACAGGTATTTCTCGTTCGCGCTCAAGACCCTCGCGAGGA TGGGGCGCTTGGACCTCAGTCTCCGTGTAAACGAGATGAGGGAAACGTGA GAGCGTCAGACGAGAGAATGAAACGCCTTTGCGGGTTTTGACTGGCAATC CACGCGACCGCTTGGTTGGCGGGCAGTACCCCGCAGCTTGTTCACGCAGG CACTACGCGCGTGCTGCACTCGTTTTTTTTTTGTGTGTTCCTTGCTGCTG CCGCTGATTACTTTCTTCTCGGTGCTGGTTTTGATCTCTCACTTCATACC GCTAATGCCCGTTTTTTTGTTGGAGCTGCACGCCCTTTCATCTCCTGCGC CATGCTGCACACGACGAGGCCGAGCACGAAAATAAAAAGCTCAAGGGAAG AAGGCGACCATTTGTTTTTTATCTTTGTCCGTCTACTCGCCCAGGTATCT CCAGGACGGCGAACTCGAGAGCCACGACCGCATGACGACGGCGGGGCTAG CGGTGGCCTGCCTCAGGGCCGGAGACGAGACGTCCGCCTTGGAGATGCTC GAATCCGCCGTCAAGCCCTGCTCATCCTCTATGCCAGAGGAAAACGAAGA GCTATATGTGGAAGAGGAGGAGGATGAGGAGGAGGAGGTGGAGGTGGAGG AAGAGGAAGAGGAAGAAGAGGAGGACTGGGAGGCGCTCGAGGCAGAGGAG GAGCTGGAGAAGATTGTGGAGGCCGAGGGGGAGGTGCTGCCAGAGCTGCT GGACTTCTACTTGGAGCGGGGTCAGAAGGAGAGCAGCCAGGAAGCGGCGG CCGGGGTGAGTTTTGGATGCCATGCTGTGTAGCGGAGGGTATGTAGAATA CAGTATTTACGCGCTTGGGGGTTCTCTCTACATGGAGGCGGGGCATGGGG CGGGGCGAAGGTCTCTGCCTACGATATTGATTTTGATTTCGATTGCCAGA TGTCTAGATAGATATGGACGGCTTCGTTGTGCTTGGTACCATTTTTTTTG GTACATCGGGCTAGATGTGTTTAGACTGGGCTGCACCAAGGCCCCCTGCG ACCGCTGACATTGATCAACGAGCCGAAACCCTTGCATTCGAAGAACCCAC ACCACCTACGTGGTTTATTTGTTGCGGACGAGCCACCCGATACCCGGCCG GTCCGCACCACAGACCACCAACCCCCCCCCCCCCACGCTGCTGCCTTAGA CACTCCCACGACTCCCCCCCTCCGGAATGCCTCCTAAACCCTACTACGAC TCAGCTGAGAAAGACCATAGACAGGGCTCTTCGGCAGGGGGACTTCGCAC CCTCTTCTGCCGCCACCACCGCCGCCACCACGCCGCCGCGCCTTCTTCTC TATCTGCTTCGCCACCCTCGGGCGCCCTTACCGTGTGGGCGTACAACCAG CTCATCCGGCGGCTGGGCAAGGCGGACAGGCTGTCGGACGTGTTCGAGGT ACTGGACGGCATGGCCAGGCTCGGCGTGGAGAACAACCACGAGACGCTCG AGTTCGCCACCAACGCCGCCATCAAGGAGGTGGAGTTCGAGACCCGGGCT GTCTCCATGAAGACGTTGCCCAGCGGTAAGCGGGGTGATATGGTCGGCGT GTAAACGAGGTGTGGCGCGGTGGGCGGGGAGGCGGCGAGGGGTTGTCATG AATCATACGTATGGCCATGTGTTCTCAAAACCGTCCGTCGATTTCCTTTG AAACCGGCATGAGGCGCATCGTCTGCTTTAGAGGGCCGGGTAGGGGAGGG CGGGGGGCGGGAGTCATGTCCTATATGTGTGTTGTGCATGTTGTGGTACG GGCTTGGTGCGTTACCGCCTGTTTTGACTTGCGGTCGAGTTGAAGGCCCA AGCGCTGAATACTTGCTCTCTTGACATGCTGCTTGCCGTTTTTTTTGTCT GTCTCCGACGTCTTCGTTTCGGTTTTTTTGCCCATTTTGTTCTCTTCATT TGCAGGAAAAGCGGCGCTGCCCGAGGTGGTGTTTGTGGGCCGTTCCAACG TGGGCAAGTCTTCCCTGGTGAACATGCTCGTAAACCGCAAGACCCTGGCG CCAACCTCGGCCGTGCCTGGTTTCACTCAGGTAGGTAAAGAAGTGCGGGT ACATTATTGAACAAAAATTTGTGTGTGTAGACTTCGTAGGGTTTCGCCGA ATGATCGTGTGTGTGTTTTTTTCGAGGCCAAGGATTGCTAACCGTTGAAG TACAGAAGAGAGGGAGGTTAAGGGAGGCAGCGATAGAAGCGAGATTTCCG GTAGGGTGGTTGTGCACTTCTAGTACCGTTCGTGACGCTGGTGTCCCCTT GCGGGCACCGAAGCTGTTTTGTATTTCGTTTTTTTTCTTTCGCGACAGAA GACCGGAAGAGATCCTCTTCTCGCACAAAGTTTGTCCCAACCATGCGTGC ATCTCATCCCCCCCCGCCCCCGTTGGACAATTTTCTCCACCAACCATTTG CAGCACTTCAACTACTACGCGGTGAACAAGGGGAGGAGGAAATCGCCATC CTTTTTCCTCGTCGACGTCCCTGGTCTGGGTTACGCCAGGGCCGACGACG GCCGCATGGACTCGTGGAAGAGCACGCTGCAGCGCTACCTTGGTGTCAGG GAGAACCTCCGCGTGGTGTTTCACCTCATTGACGGCAGGTGAGGATTGTG CTGCCCAAGGTGCTGTGAAGGGAGGGATTCGAAGAGGTATCGTGTCGAGC CGAAAGAATTTACCCGTGGAAAGGAGTGTAAGAGCTACCGCGGCCTCTCT CCCCAACCACCGGTAGGCCGACAGAGCCTCTCACCGCCAAGCCTCTTCAT GGCCTCGTCCTTAATCTGATGCCTACCCCCCTTTCCCTGTGCCCTGCCTG TCGCATTTAACATTGCAGGACGGGCATGCAGAAGGCGGACGAGCAGCTGA TCTCGCTCATGATGGACGAGAACGAGGGGAGGAGCAGCTACGTGGTGGTG GTTACCAAGTGCGACAAGGTGAACGACAAGAAGGTGAGAGAGGGAGTGGG AGACAGAAACGGGAGGAGAGGGACTGTGGCCCCACTTGGCGTCGATGCTG ACGTTGTTTTTGAGTTCCTGTTGCGATATCCTTGCGTAGTGTTTAACTGC AGTGGGAGCGCTGCTGCACAGCAAAATCCGCAGTGCATCGGTGACCCCGG CGCATACGCTCAGTTATCATACCGAAGGGTGTAGGCCCAGGAGTTCGCAG AAAATGAGGCGAAAAATGAATTAAGGCCAAAACCCATGCGGCGAGAATGT GAGTGATTTTCGAAGCACATCAACAGATGCCATGTGTGCTGCCATCCTCC TCCATCGATGGTCGTCCTACATCATTTCTACCCCCCTCTCCCACCGCTTC CGCCAAACCACAATCACATGCGCCCTGCCCCACGCACACACATACATATA CACCTGTCCCTTCCCCCTCTTGGGTGTTGGTTGCTACACGCAGCTGAAGG GGGTGACGGAGAAGGTGCGACAAACCCTCGACAAGAACGGCTTCCCCAAG ACCACCCCGGTCATCCCCACCAGCGCCAAGTCCAGGCAAGGCAGGGTGGA GTTACTAGGATACCTGCGGCTGGTTTTCGATGTCGACCGGCGAAAAGGCA AGGGGCCCGCTGGCGCCGCCGCCGCGGGTCCGCCGCAGGAGGAGCGGGAG GGGGCGCTGCAGGGGGAGGACCGAAGAAGGAAGCGATAGTAGGTGGTGAC TTGTAGCCTGTAGGGTCGACCGAGGGCGTCGATGCAAGTGCTGGACGGAT GTCACACGCACACCGTGTGATACGCGCTTGTGATTTGGCGGTTTGACCTT GGAATCGAAGGTGTGTCCCCCCTCTGATGCGTCGAGTAGGTACCGGTAGA TTTGGTGCGCAGAATACATTGGAGGGATGGAGAACAACGTCATAAAATTT CCTGAGCCGCGCTCGGTTGAAACTCAGGCGTACATCGCTATTTTACCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7993:983..6830-

>mRNA_Ecto-sp13_S_contig7993.19295.1 ID=mRNA_Ecto-sp13_S_contig7993.19295.1|Name=mRNA_Ecto-sp13_S_contig7993.19295.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1323bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7993:983..6830- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAGCAGGAGGAGGAAATGGAGGCTGCAGGCAGCCGCAGAACAGGCCG
AAAAAACAGGAACAAGGCTGAACCCGCCGCGCAGTCGGACGATCTATCGG
ATCTGGACATGTATTTCGACAAGCAATCGGACTGGAGAGACTCCTCGTCT
TCAGCAGCACCAACAACACCCGCTGGCCCTCTCCCAAGTGGCGGAGAAGC
CGCGGGTAGGCGGCGGGGCAAGGCAGTTGAAGGCGACGACTTGGCGGCAC
AACTAGCGGCGGGTCTGGGGCTCAACGTGGTGGCACCCTCCTCCTCCCGC
CCTTCGACGGGCACCGAGGAGGAGGCGGCAACAGCAATGCACGAAACAGA
TGGGCGATACCAGGATGATAGCGAAGAGGAGGAGGAGGAGATGATGATGA
TGGACGAGGACAGTGCCGGGGCACGGCTCGGCGGGTGGTTCAACGACGGG
CAGAACGCCAGTCGGCGGGAGCGGACGCGGGCCATCCGCAAGGAGGAGAA
GGAAGGGAAGAGCGCGGAGAAGGTAATTGCTATGGTCGTCTCGGTGGCGG
AGCGTGACGGAGTCCGCGACGACAGGTATTTCTCGTTCGCGCTCAAGACC
CTCGCGAGGATGGGGCGCTTGGACCTCAGTCTCCGTGTAAACGAGATGAG
GGAAACGTATCTCCAGGACGGCGAACTCGAGAGCCACGACCGCATGACGA
CGGCGGGGCTAGCGGTGGCCTGCCTCAGGGCCGGAGACGAGACGTCCGCC
TTGGAGATGCTCGAATCCGCCGTCAAGCCCTGCTCATCCTCTATGCCAGA
GGAAAACGAAGAGCTATATGTGGAAGAGGAGGAGGATGAGGAGGAGGAGG
TGGAGGTGGAGGAAGAGGAAGAGGAAGAAGAGGAGGACTGGGAGGCGCTC
GAGGCAGAGGAGGAGCTGGAGAAGATTGTGGAGGCCGAGGGGGAGGTGCT
GCCAGAGCTGCTGGACTTCTACTTGGAGCGGGGTCAGAAGGAGAGCAGCC
AGGAAGCGGCGGCCGGGCTGAGAAAGACCATAGACAGGGCTCTTCGGCAG
GGGGACTTCGCACCCTCTTCTGCCGCCACCACCGCCGCCACCACGCCGCC
GCGCCTTCTTCTCTATCTGCTTCGCCACCCTCGGGCGCCCTTACCGTGTG
GGCGTACAACCAGCTCATCCGGCGGCTGGGCAAGGCGGACAGGCTGTCGG
ACGTGTTCGAGGTACTGGACGGCATGGCCAGGCTCGGCGTGGAGAACAAC
CACGAGACGCTCGAGTTCGCCACCAACGCCGCCATCAAGGAGGTGGAGTT
CGAGACCCGGGCTGTCTCCATGA
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