mRNA_Ecto-sp13_S_contig7993.19295.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7993.19295.1 vs. uniprot
Match: A0A6H5KCE8_9PHAE (EngB-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCE8_9PHAE) HSP 1 Score: 561 bits (1446), Expect = 1.580e-186 Identity = 343/370 (92.70%), Postives = 350/370 (94.59%), Query Frame = 1
Query: 1 LEEIARNALSQDVMEQEEEMEAAGSRRTGRKNRNKAEPAAQSDDLSDLDMYFDKQSDWRDSSSSAAPTTPAGPLPSGGEAAGRRRGKAVEGDDLAAQLAAGLGLNVVAPSSSRPSTGTEEEAATAMHETDGRYQDXXXXXXXXXXXXXEDSAGARLGGWFNDGQNASRRERTRAIRKEEKEGKSAEKVIAMVVSVAERDGVRDDRYFSFALKTLARMGRLDLSLRVNEMRETYLQDGELESHDRMTTAGLAVACLRAGDETSALEMLESAVKPCSSSMPEENEELYVEEXXXXXXXXXXXXXXXXXXXDWEALEAEEELEKIVEAEGEVLPELLDFYLERGQKESSQEAAAGLRKTIDRALRQGDFAPSS 1110
LEEIARNALSQDVMEQEEE+EAAGSRRTGRKNRNKAEPAAQSDDLSDLDMYFDKQSDWRDSSSSAAPTTPAGPLPS G+AAGRRRGK VEGDDLAAQLAAGLGLNVVAPSSSRPSTGTEEEAATAMHETDGRYQDXXXXXXXXXXXX ED+AGARLGGWFNDGQNASRRERTRAIRKEEKEGKSAEKVIAMVVS AERDGVRDDRYFSFALKTLARMGRLDLSLRVNEMRETYLQDGELESHDRMTTAGLAVACLRAGDETSALEMLESAVKP SSS+PE+NEEL VEE XXXXXXXXXXXXX WEALEA EELEKI+EAEGEVLPELLDFYLERGQKESSQEAAAG+R ALR GDFAPSS
Sbjct: 139 LEEIARNALSQDVMEQEEEIEAAGSRRTGRKNRNKAEPAAQSDDLSDLDMYFDKQSDWRDSSSSAAPTTPAGPLPSSGKAAGRRRGKVVEGDDLAAQLAAGLGLNVVAPSSSRPSTGTEEEAATAMHETDGRYQDXXXXXXXXXXXXDEDNAGARLGGWFNDGQNASRRERTRAIRKEEKEGKSAEKVIAMVVSAAERDGVRDDRYFSFALKTLARMGRLDLSLRVNEMRETYLQDGELESHDRMTTAGLAVACLRAGDETSALEMLESAVKPYSSSIPEQNEELQVEEEAXXXXXXXXXXXXX-----WEALEAAEELEKILEAEGEVLPELLDFYLERGQKESSQEAAAGVR-----ALRHGDFAPSS 498
BLAST of mRNA_Ecto-sp13_S_contig7993.19295.1 vs. uniprot
Match: A0A836C7W4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7W4_9STRA) HSP 1 Score: 218 bits (554), Expect = 5.570e-61 Identity = 136/303 (44.88%), Postives = 169/303 (55.78%), Query Frame = 3
Query: 1179 LTVWAYNQLIRRLGKADRLSDVFEVLDGMARLGVENNHETLEFATNAAIKEVEFETRAVSMKTLPSGKAALPEVVFVGRSNVGKSSLVNMLVNRKTLAPTSAVPGFTQHFNYYAVNKGRRKSPSFFLVDVPGLGYARADDGRMDSWKSTLQRYLGVRENLRVVFHLIDGRTGMQKADEQLISLMMD----------------------ENEGRSS--------------------------YVVVVTKCDKVNDKKLKGVTEKVRQTLDKNGFPKTTPVIPTSAKSRQGRVELLGYLRLVFDV 1943
L A N LIR LG+ D LSDVF +LD M V+ + ET EF NAA+KEV FE AVSMKTLP PE++FVGRSNVGKSSLVNMLVNRK +APTS+ PGFT N+Y+VN GR++ LVDVPGLG+A AD GR+DSW+STLQRYL VR LR FHLID R G Q+AD L+++ + EG SS YV+V+TK D+V +L+ + G PV+ +S+K+R GR L R ++DV
Sbjct: 17 LAATACNALIRHLGRVDLLSDVFALLDSMRAAKVKPDAETWEFVANAAVKEVAFECSAVSMKTLPP--PGPPEILFVGRSNVGKSSLVNMLVNRKAIAPTSSKPGFTTELNFYSVNAGRKRGLRCRLVDVPGLGFAEADAGRVDSWRSTLQRYLAVRAPLRCAFHLIDARDGPQRADRDLMAMXXXXXXXXXXXXXXXXXXXXXXXXXDGEGGSSXXXXXXXXXXXXXXXGSDYVRRQPPAYVIVLTKADRVAAPRLQMACAEAAXXXXXXGLGGDVPVLVSSSKTRTGRDVLW---RRLYDV 314
BLAST of mRNA_Ecto-sp13_S_contig7993.19295.1 vs. uniprot
Match: R7Q9B2_CHOCR (EngB-type G domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9B2_CHOCR) HSP 1 Score: 213 bits (541), Expect = 2.160e-57 Identity = 122/264 (46.21%), Postives = 164/264 (62.12%), Query Frame = 3
Query: 1149 SLSASPPSGALTVWAYNQLIRRLGKADRLSDVFEVLDGMARLGVENNHETLEFATNAAIKEVEFETRAVSMKTLPSGKAALPEVVFVGRSNVGKSSLVNMLVNRKTLAPTSAVPGFTQHFNYYAVNKGRRKSPSFFLVDVPGLGYARADDGRMDSWKSTLQRYLGVRENLRVVFHLIDGRTGMQKADEQLISLMMDENEGRSSYVVVVTKCDKVNDKKLK-GVTEKVRQTLDKNGFPKTTPVIPTSAKSRQGRVELLGYLRLVF 1937
+L + AL + YN IR LGK+ + VF +LD M VE N+ET EF NAA+++V+F T AVSM TLP EV FVGRSNVGKSSLVNML NRK LA S PG TQ FNY+ VN ++S F++VD+PG+GYAR ++W +++YL R +LR++FHLIDGR G DEQL+ L+ + YVVV TK DK++ +KLK V + R L +NG TP++ +S+ +R GR E+ +L+ V
Sbjct: 198 TLPIQDDAAALPIKEYNNCIRVLGKSRSMPGVFAILDLMKASKVEANNETYEFLANAAVRQVDFVTGAVSMDTLPP--PITTEVAFVGRSNVGKSSLVNMLCNRKALAYVSGTPGKTQQFNYFHVNAKDQES-QFYMVDLPGVGYARVPRPVQEAWIRFMEQYLQYRTSLRLIFHLIDGRHGAMTDDEQLMRLIAASGRQKGEYVVVFTKMDKMDKQKLKQAVINETRSALSRNGCRSDTPIVISSSSTRLGRDEMWRHLQSVL 458
BLAST of mRNA_Ecto-sp13_S_contig7993.19295.1 vs. uniprot
Match: A0A7S1EK19_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EK19_HEMAN) HSP 1 Score: 211 bits (536), Expect = 7.810e-57 Identity = 119/249 (47.79%), Postives = 159/249 (63.86%), Query Frame = 3
Query: 1185 VWAYNQLIRRLGKADRLSDVFEVLDGMARLGVENNHETLEFATNAAIKEVEFETRAVSMKTLPSGKAALPEVVFVGRSNVGKSSLVNMLVNRKTLAPTSAVPGFTQHFNYYAVNKGRRKSPSFFLVDVPGLGYARADDGRMDSWKSTLQRYLGVRENLRVVFHLIDGRTGMQKADEQLISLMMDENEGRSSYVVVVTKCDKVNDKKLKGVTEKVRQTLDKNGFPKTTPVIPTSAKSRQGRVELLGYLRL 1931
V YN LI++ GKA L VF VLD M GVE + ETLEF +NAA++++EF AVS+ TLP LPE F GRSNVGKSSLVNML NRK LA +S PG TQ FNY+ VN F LVD+PG+GYA+ W L YL RE+L+V+FHL+D R G QK D +L+ L E + +++VVV+TK DK++ K + + + VR L + G + TP++ TSA++++GR E+ YL+L
Sbjct: 121 VTTYNYLIKQFGKAGSLQGVFLVLDAMKEAGVEADAETLEFLSNAAVRQIEFVKGAVSVDTLPD---PLPEACFAGRSNVGKSSLVNMLSNRKKLAFSSKTPGKTQQFNYFVVNGQDDVGNKFHLVDLPGVGYAKVPVAVRREWVGFLTSYLTQRESLKVLFHLVDSRHGPQKDDLELMKLYA-ETKCSAAFVVVLTKIDKIDGKVRQSIVDGVRDALVECGCSRDTPILQTSAETKRGRDEVWNYLKL 365
BLAST of mRNA_Ecto-sp13_S_contig7993.19295.1 vs. uniprot
Match: A0A2V3IQZ2_9FLOR (Putative GTP-binding protein EngB n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQZ2_9FLOR) HSP 1 Score: 197 bits (501), Expect = 1.940e-51 Identity = 117/254 (46.06%), Postives = 157/254 (61.81%), Query Frame = 3
Query: 1170 SGALTVWAYNQLIRRLGKADRLSDVFEVLDGMARLGVENNHETLEFATNAAIKEVEFETRAVSMKTLPSGKAALPEVVFVGRSNVGKSSLVNMLVNRKTLAPTSAVPGFTQHFNYYAVNKGRRKSPSFFLVDVPGLGYARADDGRMDSWKSTLQRYLGVRENLRVVFHLIDGRTGMQKADEQLISLMMDENEGRSSYVVVVTKCDKVNDKKLK-GVTEKVRQTLDKNGFPKTTPVIPTSAKSRQGRVELLGYLR 1928
+ A+ + YN IR LGK L VFEVLD + V+ ++ET EF NAA+++V F AVSM TLP A EV FVGRSNVGKSSLVNM+ NRK LA S PG TQ FNY+ VN+ R F+LVD+PG+GYA+ + W +++YL R +LR+VFHLIDGR G DEQL+ + +G YV+V+TK DK + ++ K V +K R L +NG P++ TSA SR GR ++ +++
Sbjct: 251 NAAVEIGLYNTAIRMLGKNKMLESVFEVLDMVRLAQVKPDNETFEFLANAAVRQVRFVKGAVSMDTLPEPLGA--EVAFVGRSNVGKSSLVNMICNRKALAYVSGRPGKTQQFNYFLVNE-RSPETQFYLVDLPGVGYAKVPIPVKEEWLRFMRQYLKHRTSLRIVFHLIDGRHGALADDEQLMQEIAGYGKGLQ-YVLVLTKMDKADKQRAKRSVMDKTRAALVRNGCSPDIPIVLTSASSRLGRDDMWRHMQ 500
BLAST of mRNA_Ecto-sp13_S_contig7993.19295.1 vs. uniprot
Match: A0A5J4Z606_PORPP (Putative GTP-binding protein EngB n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z606_PORPP) HSP 1 Score: 193 bits (491), Expect = 1.530e-49 Identity = 117/284 (41.20%), Postives = 164/284 (57.75%), Query Frame = 3
Query: 1179 LTVWAYNQLIRRLGKADRLSDVFEVLDGMARLGVENNHETLEFATNAAIKEVEFETRAVSMKTLPSGKAALPEVVFVGRSNVGKSSLVNMLVNRKTLAPTSAVPGFTQHFNYYAVN-----------------------------------KGRRKSPSFFLVDVPGLGYARADDGRMDSWKSTLQRYLGVRENLRVVFHLIDGRTGMQKADE---QLISLMMDENEGRSSYVVVVTKCDKVNDKKLKG-VTEKVRQTLDKNGFPKTTPVIPTSAKSRQGRVEL 1913
L + N +IRRLGKA RL +F +LD M G+ N+E+ EF NAA+++VEF T AVSM+TLP + LPE +FVGRSNVGKSSLVNM++ RK LA TS PG TQ FNY+ VN K SP F++VD PG+GYA+ DSWK ++ +L RE+LR++FHL+DGR G DE Q+++ + + + YV+V+TK DK + + K V + R L+KNG + P++ TS+++R GR ++
Sbjct: 279 LMIETCNTMIRRLGKAGRLELIFLLLDAMHACGISTNNESYEFLANAAVRKVEFLTGAVSMETLP--ERTLPEAMFVGRSNVGKSSLVNMVLARKFLAHTSKRPGKTQQFNYFLVNDDAQAAPAIKTNKRALRRRELGHSAEQAQAQRAATKALPASPPFYIVDSPGVGYAKVSRPVQDSWKQFMRDFLTSRESLRLLFHLVDGRHGPLADDEELSQIVAALSRSGQFMAEYVIVLTKMDKTSKGRAKPRVVQSTRDLLEKNGL-QGVPIVSTSSETRLGRDDM 559
BLAST of mRNA_Ecto-sp13_S_contig7993.19295.1 vs. uniprot
Match: A0A7S1EQV8_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQV8_9RHOD) HSP 1 Score: 189 bits (480), Expect = 2.180e-48 Identity = 124/310 (40.00%), Postives = 168/310 (54.19%), Query Frame = 3
Query: 1152 LSASPPSGALTVWAYNQLIRRLGKADRLSDVFEVLDGMARLGVENNHETLEFATNAAIKEVEFETRAVSMKTLPSGKAALPEVVFVGRSNVGKSSLVNMLVNRKTLAPTSAVPGFTQHFNYYAVNKGR-------------------------RKSPS-------------------FFLVDVPGLGYARADDGRMDSWKSTLQRYLGVRENLRVVFHLIDGRTGMQKADEQLISLMMD--ENEGRSS--YVVVVTKCDKVNDKKLK-GVTEKVRQTLDKNGFPKTTPVIPTSAKSRQGRVELLGYLRLV 1934
L + G V YN++IR LGK L+ VF+VLD M ++ ++ET EF NAA++ VEF VSM T+P + LPE +F+GRSNVGKSSLVNM V RK LA TS PG TQ FNY+ VN + RK+P+ F+LVD PG+GYA+ +SW ++ +L LRVVFHLIDGR G D L+ ++ D E SS +V+V+TK DK++ K+K GV ++ Q L G ++TP+I TS++S+ GR E+ YLR V
Sbjct: 216 LKSENKDGESFVGIYNEVIRHLGKIGALNVVFDVLDVMNLANIQKDNETWEFLANAAVRRVEFVKGVVSMDTMPDQE--LPEAMFIGRSNVGKSSLVNMTVGRKALAHTSKRPGKTQQFNYFVVNGKKDAIEYKDKSVVKEQKKMSKRAMEKLRKNPNARGNLGRSERKEIKEDLKAFYLVDCPGVGYAKVPKEMQESWTRFIRDFLSKSSRLRVVFHLIDGRHGPMDDDRLLLEMVSDLKSKELMSSVQFVIVLTKVDKLDKSKVKSGVMQQTVQALKTVGLLESTPIISTSSQSKIGRDEMWRYLRSV 523
BLAST of mRNA_Ecto-sp13_S_contig7993.19295.1 vs. uniprot
Match: A0A836C8M6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8M6_9STRA) HSP 1 Score: 182 bits (461), Expect = 8.310e-48 Identity = 119/281 (42.35%), Postives = 164/281 (58.36%), Query Frame = 3
Query: 1176 ALTVWAYNQLIRRLGKADRLSDVFEVLDGMARLGVENNHETLEFATNAAIKEVEFETRAVSMKTLPSGKAALPEVVFVGRSNVGKSSLVNMLVNRKTLAPTSAVPGFTQHFNYYAVNKGRR-------KSPSFFLVDVPGLGYARADDGRMDSWKSTLQRYLGVRENLRVVFHLIDGRTGMQKADEQLISLMMDENEGRSSYVVVVTKCDKVNDKKLKGVTEKVRQTLDKNGFPKTTPVIPTSAKSRQGRVELLGYLRLVFDVDRRKGKGPAGAAAAGPPQ 1997
A+++ A N+LIR + L VF VLD M V N +T E NAA++ VEF T AVSM+TLP + LPE F+GRSNVGKSSLVNM+ NRK LA TS PG TQ N++ VN G ++ +F+LVD+PG GYA+ + SW+ L++Y+ R +LRV+FHL+DGR G D+ ++ M + YV+V+TK DK ++ GV L + G + PV+ TSA+++ GR + YLRL +DR G G AAA P +
Sbjct: 44 AISIDAANRLIRAAQRRRDLRAVFAVLDAMTAARVAPNDDTYEAVANAAVRSVEFVTGAVSMETLP--RKWLPEAAFIGRSNVGKSSLVNMVCNRKALAYTSKRPGKTQQLNFFEVNGGAAAAGAGDGEAHAFYLVDMPGHGYAKVSEQLRTSWQDLLKQYVAQRRSLRVLFHLLDGRHGPVGHDKAIMKEMA-RLPSYARYVIVLTKADKQDNTVSAGVMAATITALREAGV-ENAPVVITSAETKLGRDAMWRYLRLAA-LDRSGG----GRAAATPAE 315
BLAST of mRNA_Ecto-sp13_S_contig7993.19295.1 vs. uniprot
Match: A0A6H5KPF6_9PHAE (EngB-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPF6_9PHAE) HSP 1 Score: 190 bits (483), Expect = 9.050e-48 Identity = 114/247 (46.15%), Postives = 153/247 (61.94%), Query Frame = 3
Query: 1191 AYNQLIRRLGKADRLSDVFEVLDGMARLGVENNHETLEFATNAAIKEVEFETRAVSMKTLPSGKAALPEVVFVGRSNVGKSSLVNMLVNRKTLAPTSAVPGFTQHFNYYAVNKGRRKSPSFFLVDVPGLGYARADDGRMDSWKSTLQRYLGVRENLRVVFHLIDGRTGMQKADEQLISLMMDENEGRSSYVVVVTKCDKVNDKKLKGVTEKVRQTLDKNGFPKTTPVIPTSAKSRQGRVELLGYLRL 1931
A N+L++ K L VF+VLD MA GV+ + ET E+ NAA++ V+F AVSM TLP + LPE F+GRSNVGKSSL+NM+ NRK LA TS PG TQ FNY+ +N S F+LVD+PG+GYA+ + + W + + Y+ R +LRV+FHLIDGR G D ++ LM E + YVVV+TK DK ++ + V E V L + G +T PV+ TSA S+ GR + YLRL
Sbjct: 369 AANRLLQGFHKRRDLEAVFKVLDVMAAAGVDGDDETYEWLANAAVRGVDFVKGAVSMATLPK-EPVLPEAAFIGRSNVGKSSLINMVCNRKALAFTSKRPGKTQQFNYFLMNNNTENS--FYLVDLPGMGYAKVPEKQRKEWSTLFRSYITRRSSLRVLFHLIDGRHGPVGQDHAIMKLMA-ELPDTARYVVVLTKADKSDNSVSRQVLEGVVAALREAGVSRT-PVVLTSAASKLGRDGMWRYLRL 610
BLAST of mRNA_Ecto-sp13_S_contig7993.19295.1 vs. uniprot
Match: A0A7S2FR04_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FR04_9STRA) HSP 1 Score: 187 bits (474), Expect = 1.230e-47 Identity = 114/270 (42.22%), Postives = 157/270 (58.15%), Query Frame = 3
Query: 1146 SSLSASPPSGALTVWAYNQLIRRLGKADRLSDVFEVLDGMARLGVENNHETLEFATNAAIKEVEFETRAVSMKTLPSGKAALPEVVFVGRSNVGKSSLVNMLVNRKTLAPTSAVPGFTQHFNYYAVNKGRRKSPS--FFLVDVPGLGYARADDGRMDSWKSTLQRYLGVRENLRVVFHLIDGRTGMQKADEQLISLMMD-ENEGRSSYVVVVTKCDK--VNDKKLKGVTEKVRQTLDKN-GFPKTT--PVIPTSAKSRQGRVELLGYLRL 1931
S + P +++ +N+L++ A L +F ++D M+ N T E NAA++ V+F T AVSM TLP+ +PEV F+GRSNVGKSSLVNML NRK LA TS PG TQ FNY+ +N+ +P F +VD+PGLGYA+ +W + +YL RE LRVVFHL+D R G DE++I LM R YV+V+TK DK VN+K V++ LD + G + P++ TS+ SR GR ++ YLRL
Sbjct: 253 SGRTTGQPVEPVSIELFNKLLKEFASARHLPALFHLMDVMSDTKAVANDITFEIVANAAVRSVDFVTSAVSMDTLPA--PLIPEVAFIGRSNVGKSSLVNMLCNRKALAYTSKTPGKTQQFNYFVINEASNWNPKCDFHMVDLPGLGYAKVPQAVRKNWVEFMTQYLEEREPLRVVFHLMDARLGPVAQDEEIIRLMEQISTRERFQYVIVLTKVDKKDVNEKGTLVAMASVQRALDDSFGVEAASQIPIVATSSISRLGRDQMWRYLRL 520 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7993.19295.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7993.19295.1 >prot_Ecto-sp13_S_contig7993.19295.1 ID=prot_Ecto-sp13_S_contig7993.19295.1|Name=mRNA_Ecto-sp13_S_contig7993.19295.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=441bp MEQEEEMEAAGSRRTGRKNRNKAEPAAQSDDLSDLDMYFDKQSDWRDSSSback to top mRNA from alignment at Ecto-sp13_S_contig7993:983..6830- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7993.19295.1 ID=mRNA_Ecto-sp13_S_contig7993.19295.1|Name=mRNA_Ecto-sp13_S_contig7993.19295.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5848bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7993:983..6830- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7993:983..6830- >mRNA_Ecto-sp13_S_contig7993.19295.1 ID=mRNA_Ecto-sp13_S_contig7993.19295.1|Name=mRNA_Ecto-sp13_S_contig7993.19295.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1323bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7993:983..6830- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |