mRNA_Ecto-sp13_S_contig7955.19249.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7955.19249.1 vs. uniprot
Match: D8LEF5_ECTSI (Exo-1,3-beta-glucanase, family GH5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF5_ECTSI) HSP 1 Score: 496 bits (1277), Expect = 1.380e-171 Identity = 249/283 (87.99%), Postives = 254/283 (89.75%), Query Frame = 1
Query: 4 DTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLKEREESSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVDHGFIDTDFPEDACIHPPATDWAEPLGADGSGSGGDANLAAAQAPSGVTAREDGNAAAAVEVSNSPEETKRGSQKGVSSPGAMLGLVLLGAMAGALATFLLVRRKAASQGASVSASGGAEKGSSNRGGGWMPAVFRSGYDTIGQQSLP 852
DTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHL ERE SSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAV+HGFID DFP DAC+HPPATDWAEPLG DGSGSGGDANL AAQAPSGVTAR DGNAAAAV VS+SPEE +RGSQ+G SSPGAMLGLVLLGAMAGALATFLLVRRKAASQG GWMPAVF SGYDTIGQQSLP
Sbjct: 310 DTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLAEREGSSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDLDFPNDACVHPPATDWAEPLGTDGSGSGGDANLVAAQAPSGVTARVDGNAAAAVGVSHSPEEAQRGSQEGASSPGAMLGLVLLGAMAGALATFLLVRRKAASQGXXXXXXXXXXXXXXXXXXGWMPAVFSSGYDTIGQQSLP 592
BLAST of mRNA_Ecto-sp13_S_contig7955.19249.1 vs. uniprot
Match: A0A6H5JTP7_9PHAE (GH5 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTP7_9PHAE) HSP 1 Score: 488 bits (1257), Expect = 2.360e-171 Identity = 246/261 (94.25%), Postives = 249/261 (95.40%), Query Frame = 1
Query: 34 ADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLKEREESSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVDHGFIDTDFPEDACIHPPATDWAEPLGADGSGSGGDANLAAAQAPSGVTAREDGNAAAAVEVSNSPEETKRGSQKGVSSPGAMLGLVLLGAMAGALATFLLVRRKAASQGASVSASGGAEKGSSNRGGGWMPAVFR 816
ADLSSDTAVGDRQK+YVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHL ERE +SWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAV+HGFIDTDFPEDACIHPPATDWAEPLG DGSGSGGDANLAAAQAPSGVTAR DGNAAAAVEVSNSPEE RGSQKG SSPGAMLGLVLLGAMAGALATFLLVRRKAASQGAS SASGGAEK NRG GWMPAVFR
Sbjct: 140 ADLSSDTAVGDRQKIYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLTEREGNSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDTDFPEDACIHPPATDWAEPLGTDGSGSGGDANLAAAQAPSGVTARVDGNAAAAVEVSNSPEEPMRGSQKGASSPGAMLGLVLLGAMAGALATFLLVRRKAASQGASASASGGAEKRGGNRGAGWMPAVFR 400
BLAST of mRNA_Ecto-sp13_S_contig7955.19249.1 vs. uniprot
Match: A0A836CCQ8_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCQ8_9STRA) HSP 1 Score: 235 bits (599), Expect = 1.390e-68 Identity = 99/160 (61.88%), Postives = 126/160 (78.75%), Query Frame = 1
Query: 4 DTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLKEREESSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVDHGFIDTDFPEDACIHPPATDWAEP 483
D+H+YHGFNP+D +SDT DRQKMY HERM+C Y SMLRYQTC+ +PV V EWSLA+DNCMP+LD K D+GQC+H+ ER SWW+ H RSFA RQI +E+EMGW+FW WKL++ K++P++ +WSF +AV G+IDT +P DAC+HPPA DWA P
Sbjct: 434 DSHLYHGFNPSDAASDTPSMDRQKMYTHERMSCGYGSMLRYQTCSTVPVAVLEWSLAIDNCMPYLDPKKQDYGQCNHVAERLTDSWWTSHIRSFASRQIAVFEKEMGWSFWCWKLDEQAMKSDPSAAFWSFKLAVHKGYIDTRYPSDACMHPPAEDWAVP 593
BLAST of mRNA_Ecto-sp13_S_contig7955.19249.1 vs. uniprot
Match: A0A4D9D2R7_9STRA (Cellulase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2R7_9STRA) HSP 1 Score: 211 bits (538), Expect = 3.400e-60 Identity = 88/159 (55.35%), Postives = 117/159 (73.58%), Query Frame = 1
Query: 4 DTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLKEREESSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVDHGFIDTDFPEDACIHPPATDWAE 480
DTHIYHGFNP+D++SD+ D+QKMYVHERM+C+ TSMLRY+TC+ P + GE+SLA+DNCM +D KF ++GQCD + R WW +H RSFA RQ+D YERE+GW+FWT+KL+ H E ++ WSF +AV G+IDT +P AC + P DW +
Sbjct: 372 DTHIYHGFNPSDIASDSYQADKQKMYVHERMSCAMTSMLRYETCSAAPTITGEFSLAIDNCMDAIDRKFQNYGQCDRIARRSTDPWWKDHIRSFAHRQMDVYERELGWSFWTYKLDKHAETTAESAPLWSFRLAVKEGYIDTSYPPHACRYDPVADWQD 530
BLAST of mRNA_Ecto-sp13_S_contig7955.19249.1 vs. uniprot
Match: A0A7S2XF99_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XF99_9EUKA) HSP 1 Score: 146 bits (369), Expect = 1.650e-36 Identity = 73/163 (44.79%), Postives = 100/163 (61.35%), Query Frame = 1
Query: 4 DTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLD------SKFADFGQCDHLKEREESSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVDHGFIDTDFPEDA-----CIHP 459
DTH+YH FNP+D++SD D K MAC Y S+LRY+TC+ LP M GEWSLA+D+CM +L ++F DFGQC +LKER + W+ + FA RQ +E+E+GW FWTWK++ K+ A WS+SMAV+ G+ + +A C HP
Sbjct: 412 DTHLYHAFNPSDVASDNPHDDMMKQITASDMACGYGSLLRYKTCSSLPTMTGEWSLAIDDCMKFLTGSTSSANQFTDFGQCKNLKERN-TPQWTALIKDFAARQRAVFEKELGWVFWTWKVDKEASKDISAP-LWSYSMAVEAGYFPDNLNTEADVTKGCDHP 572
BLAST of mRNA_Ecto-sp13_S_contig7955.19249.1 vs. uniprot
Match: A0A6T6YDK2_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A6T6YDK2_9EUKA) HSP 1 Score: 145 bits (367), Expect = 6.980e-36 Identity = 70/163 (42.94%), Postives = 100/163 (61.35%), Query Frame = 1
Query: 4 DTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLD------SKFADFGQCDHLKEREESSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVDHGFIDTDFPED-----ACIHP 459
DTH+YH FNP+D++SD D K MAC Y S+LRY+TC+ LP + GEWSLA+D+CM +L ++F DFGQC L+ R + W+ + F+ RQ +E+E+GW FW WK++D K+ A KYWS++ AV+H + D ++ AC HP
Sbjct: 484 DTHLYHAFNPSDVASDNPHDDMMKQITASNMACGYGSLLRYKTCSSLPTLTGEWSLAIDDCMKFLTGSTHSANQFKDFGQCKDLESRT-TDQWTTLVKDFSRRQRAVFEKELGWIFWAWKVDDVANKDISA-KYWSYTKAVEHEYFPKDLEKEPKVVLACDHP 644
BLAST of mRNA_Ecto-sp13_S_contig7955.19249.1 vs. uniprot
Match: A0A168R515_ABSGL (Cellulase domain-containing protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168R515_ABSGL) HSP 1 Score: 65.5 bits (158), Expect = 2.440e-8 Identity = 48/162 (29.63%), Postives = 77/162 (47.53%), Query Frame = 1
Query: 4 DTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWL----------------DSKFADFGQCDHLKEREESSWWSEHT---RSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVDHGFIDTD 432
+TH+Y FNP + + ++Q + + ++ S L T V P MVGE+S A ++C +L DSK D C+ + + +SW SE+ +F Q+D YE +GW FWT+K E H+ + +W +S+A + GF D
Sbjct: 390 ETHMYLIFNPYLVYMER---EKQAAFPCD----TWRSQLSESTRDVAPTMVGEFSYATNDCGKYLNGVGYGNRYENTMDGGDSKCTD---CNCTEINDWTSWTSEYKSFLNTFIQHQMDAYEAGVGWFFWTYKTEQHI------NPHWDYSLAWEQGFAPKD 535
BLAST of mRNA_Ecto-sp13_S_contig7955.19249.1 vs. uniprot
Match: A0A4P9ZTV6_9FUNG (Exo-beta-1,3-glucanase n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZTV6_9FUNG) HSP 1 Score: 65.1 bits (157), Expect = 2.780e-8 Identity = 48/159 (30.19%), Postives = 74/159 (46.54%), Query Frame = 1
Query: 4 DTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDS--KFADFG-----------QCDHLKEREESSW---WSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVDHGFIDTD 432
DTHIYH F D++ T ++ H +AC++ + A LP MVGEWSLA ++C WL+ + A F C + + + +++ + + R FA Q+D YE GW FW +K E S W + + V+ G+I D
Sbjct: 273 DTHIYHVF---DVALQTKSEEQ-----HIDLACTHKREVATSQ-ANLPTMVGEWSLATNDCTKWLNGYGRGARFNGTYITTAPVCPSCSCIGDADYANFSTHYKQWLRRFAETQMDAYEAGSGWIFWNFKAEQ--------SPQWDYMLGVEQGWIPID 414
BLAST of mRNA_Ecto-sp13_S_contig7955.19249.1 vs. uniprot
Match: A0A8H3U251_VENIN (Cellulase domain-containing protein n=2 Tax=Venturia inaequalis TaxID=5025 RepID=A0A8H3U251_VENIN) HSP 1 Score: 59.7 bits (143), Expect = 1.670e-6 Identity = 43/132 (32.58%), Postives = 57/132 (43.18%), Query Frame = 1
Query: 1 QDTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWL---------DSKFAD---FGQCDHLKEREESSWWSE---HTRSFAMRQIDRYEREMGWAFWTWKLE 351
QDTH Y F ++ A H AC++ +R A P++ GEW+ A+ +C +L D FA G C L+ +SW E TR F Q+D YE GW FWTWK E
Sbjct: 259 QDTHHYEIFTQDQVALSPAA--------HVSTACAFGGEMRG---ASHPIISGEWTGAMTDCTKYLNGFAKGARFDGSFAGSSAVGSCAGLQTGSVASWSQELKVQTRRFIEAQLDAYESNAGWLFWTWKTE 379
BLAST of mRNA_Ecto-sp13_S_contig7955.19249.1 vs. uniprot
Match: A0A1X2IKQ8_9FUNG (Glycoside hydrolase superfamily n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IKQ8_9FUNG) HSP 1 Score: 58.9 bits (141), Expect = 3.540e-6 Identity = 47/173 (27.17%), Postives = 79/173 (45.66%), Query Frame = 1
Query: 4 DTHIYHGFNPADLSSDTAVGDRQKMYVHERMAC-SYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDS------------------KFADFG-----QCDHLKEREESSWWSEHTR---SFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVDHGFIDTDFPE 441
+TH+Y F+P D DR+K V C ++ + V+P MVGE+S A ++C +++ K + G +C H+++ SW S++ SF RQ+ +E +GW FWT+K EDH+ + +W +S+A + G+ D E
Sbjct: 374 ETHMYLIFDP-----DLVNMDREKQSV---FPCHTWGPRIAEANSVVIPTMVGEFSFATNDCGKYINGVGVGNRYENTLGDDAKQQKCSSNGDNACNKCAHIEDW--GSWTSDYKHFLNSFIQRQMHAFESGLGWFFWTYKTEDHI------NPHWDYSLAWEKGWAPLDVNE 530 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7955.19249.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7955.19249.1 >prot_Ecto-sp13_S_contig7955.19249.1 ID=prot_Ecto-sp13_S_contig7955.19249.1|Name=mRNA_Ecto-sp13_S_contig7955.19249.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=285bp QDTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVback to top mRNA from alignment at Ecto-sp13_S_contig7955:149..4303+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7955.19249.1 ID=mRNA_Ecto-sp13_S_contig7955.19249.1|Name=mRNA_Ecto-sp13_S_contig7955.19249.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4155bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7955:149..4303+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7955:149..4303+ >mRNA_Ecto-sp13_S_contig7955.19249.1 ID=mRNA_Ecto-sp13_S_contig7955.19249.1|Name=mRNA_Ecto-sp13_S_contig7955.19249.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=855bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7955:149..4303+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |