mRNA_Ecto-sp13_S_contig7925.19211.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7925.19211.1 vs. uniprot
Match: D7FRH6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH6_ECTSI) HSP 1 Score: 521 bits (1341), Expect = 1.680e-185 Identity = 257/273 (94.14%), Postives = 265/273 (97.07%), Query Frame = 1
Query: 1 MTALELAFLDPKTIKDSQIDEVTHVVSKAFQDFNTSIRAPVEVYEEEFGHPEMGPGIIQSICKSHEAYAVVADGGAGKIVGVSFVDVHAKGSRVACLGPVSSIAPGAGKKSFVAACAYAEELGFSTLVLMQVAANSRSFSLYAKLGFETKHTCQYIGGFLEPPSEASLSPPPAPSGVNLKAMVAEDVEDCAELFLVAHGKGCGWDRRADITGCLGSGAPFPMLVARDADGNVVGYTTGFYIMGHTVAKSQDIFCDMFRESSKMHQQAGLPCPR 819
MTALELAFLDPKTIKDSQ+DEVTHVVS+AFQDFNTSI APVEVYEEEFGHPE GPGIIQSICKSHEAYAVVADGGAGKIVGVSFVDVHAKGSRVACLGPVSSIAPGAGKKSFVAACAYAEELGFSTLVLMQ+AANSRSFSLYAKLGFETKHTCQY+GGFLEPPSE SLSPPPAPSGV LKAMVA DVE+CAE+FL AHGKGCGWDRRADITGCL SGAPFPMLVARDADG VVGYTTGFY+MGHTVAKSQDIFCDMFRESSK+HQQAGLPCPR
Sbjct: 1 MTALELAFLDPKTIKDSQMDEVTHVVSRAFQDFNTSIGAPVEVYEEEFGHPETGPGIIQSICKSHEAYAVVADGGAGKIVGVSFVDVHAKGSRVACLGPVSSIAPGAGKKSFVAACAYAEELGFSTLVLMQIAANSRSFSLYAKLGFETKHTCQYMGGFLEPPSEGSLSPPPAPSGVTLKAMVAGDVEECAEMFLEAHGKGCGWDRRADITGCLESGAPFPMLVARDADGKVVGYTTGFYLMGHTVAKSQDIFCDMFRESSKLHQQAGLPCPR 273
BLAST of mRNA_Ecto-sp13_S_contig7925.19211.1 vs. uniprot
Match: D7FVW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVW9_ECTSI) HSP 1 Score: 456 bits (1173), Expect = 6.470e-160 Identity = 225/273 (82.42%), Postives = 245/273 (89.74%), Query Frame = 1
Query: 1 MTALELAFLDPKTIKDSQIDEVTHVVSKAFQDFNTSIRAPVEVYEEEFGHPEMGPGIIQSICKSHEAYAVVADGGAGKIVGVSFVDVHAKGSRVACLGPVSSIAPGAGKKSFVAACAYAEELGFSTLVLMQVAANSRSFSLYAKLGFETKHTCQYIGGFLEPPSEASLSPPPAPSGVNLKAMVAEDVEDCAELFLVAHGKGCGWDRRADITGCLGSGAPFPMLVARDADGNVVGYTTGFYIMGHTVAKSQDIFCDMFRESSKMHQQAGLPCPR 819
MT EL F+DPK+I DSQ+DEVT VVSKAFQDFNTSI PVEVYEEEFGHP +GP +IQSICKS+E YAVV DGGAGKIVGVSFVDVHAKGS+VA LGPV+S+A GAGKKSFVAAC YAEELGFSTL+L Q+AANSRSFSLYAKLGFETKHT QYIGGFLE PSE SL PPAPSGV LKAMVA DVE+CAELFL AHGK CGWDRRADITGCLGSG PFPMLVARDA+G VVGY+TGF+++GHTVAKSQDIFC MFRE SK+H+QAGLPCP+
Sbjct: 1 MTTQELVFIDPKSINDSQVDEVTQVVSKAFQDFNTSINTPVEVYEEEFGHPAIGPTVIQSICKSYEGYAVVEDGGAGKIVGVSFVDVHAKGSKVATLGPVASLASGAGKKSFVAACDYAEELGFSTLILTQIAANSRSFSLYAKLGFETKHTVQYIGGFLEQPSEGSLPLPPAPSGVTLKAMVAGDVEECAELFLEAHGKDCGWDRRADITGCLGSGFPFPMLVARDANGKVVGYSTGFFMIGHTVAKSQDIFCYMFREGSKLHKQAGLPCPK 273
BLAST of mRNA_Ecto-sp13_S_contig7925.19211.1 vs. uniprot
Match: D7FRH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH7_ECTSI) HSP 1 Score: 244 bits (624), Expect = 5.930e-79 Identity = 126/140 (90.00%), Postives = 132/140 (94.29%), Query Frame = 1
Query: 55 IDEVTHVVSKAFQDFNTSIRAPVEVYEEEFGHPEMGPGIIQSICKSHEAYAVVADGGAGKIVGVSFVDVHAKGSRVACLGPVSSIAPGAGKKSFVAACAYAEELGFSTLVLMQVAANSRSFSLYAKLGFETKHTCQYIGG 474
+DEVTHVVSKAFQDFNTS+ APVEVYEEEFGHPE GPGIIQSICKSHEAYAVVADGGAGKIVGVSFVDVHAKGSRVACLGPVSSIAPGAGKKSFVAACAYAEELGFSTLVLMQ+AANSRSFSLYAKLGFE + + + G
Sbjct: 1 MDEVTHVVSKAFQDFNTSMGAPVEVYEEEFGHPETGPGIIQSICKSHEAYAVVADGGAGKIVGVSFVDVHAKGSRVACLGPVSSIAPGAGKKSFVAACAYAEELGFSTLVLMQIAANSRSFSLYAKLGFEGQASLKVTTG 140
BLAST of mRNA_Ecto-sp13_S_contig7925.19211.1 vs. uniprot
Match: A0A6H5KFB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFB4_9PHAE) HSP 1 Score: 155 bits (391), Expect = 4.430e-43 Identity = 88/133 (66.17%), Postives = 97/133 (72.93%), Query Frame = 1
Query: 46 DSQIDEVTHVVSKAFQDFNTSIRAPVEVYEEEFGHPEMGPGIIQ--------------------SICKSH-EAYAVVADGGAGKIVGVSFVDVHAKGSRVACLGPVSSIAPGAGKKSFVAACAYAEELGFSTL 381
DSQ+DEVT VVSKA QDFNTS+ APVEVYEE+FGHP +GP +IQ S +H + A V DGGAGKIVGVSFVDVHAKGSRVA LGPV+S+A GAGK SFVAACAYAEELGFSTL
Sbjct: 4 DSQVDEVTQVVSKACQDFNTSVNAPVEVYEEDFGHPAIGPTVIQRAGAFRPPCIRRKLGKIFISSNAPTHPSSSAPVEDGGAGKIVGVSFVDVHAKGSRVATLGPVASLASGAGKNSFVAACAYAEELGFSTL 136
BLAST of mRNA_Ecto-sp13_S_contig7925.19211.1 vs. uniprot
Match: A0A6H5K5T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5T0_9PHAE) HSP 1 Score: 157 bits (396), Expect = 6.220e-43 Identity = 80/91 (87.91%), Postives = 83/91 (91.21%), Query Frame = 1
Query: 61 EVTHVVSKAFQDFNTSIRAPVEVYEEEFGHPEMGPGIIQSICKSHEAYAVVADGGAGKIVGVSFVDVHAKGSRVACLGPVSSIAPGAGKKS 333
EVTHVVSKAFQDFNTSI APVE+YEEEFG PE G G+IQSICKSHEAYAVVADGG GKIVGV FVDVHAKGS+ ACLG VSSIAPGAGKKS
Sbjct: 3 EVTHVVSKAFQDFNTSIHAPVELYEEEFGCPETGTGMIQSICKSHEAYAVVADGGTGKIVGVPFVDVHAKGSKEACLGAVSSIAPGAGKKS 93
BLAST of mRNA_Ecto-sp13_S_contig7925.19211.1 vs. uniprot
Match: A9P0X9_PICSI (N-acetyltransferase domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9P0X9_PICSI) HSP 1 Score: 92.8 bits (229), Expect = 1.680e-18 Identity = 74/239 (30.96%), Postives = 119/239 (49.79%), Query Frame = 1
Query: 73 VVSKAFQDFNTSIRAPVEVYEEEFGHPEMGPGIIQSICKSHEAYAVVA-DGGAGKIVGVSFVDVHAKGSRVACLGPVSSIAP-----GAGKKSFVAACAYAEELGFSTLVLMQVAANSRSFSLYAKLGFETKHTCQYIGGFLEPPSEASLSPPPAPSGVNLKAMVAEDVEDCAELFLVAHGKGCGWDRRADITGCLGSGAPFPMLVARDADGNVVGYTTGFYIMGHTVAKSQDIFCDMF 771
++ +AF FN S+ P V ++G+ E+ ++ + +S +Y + A D +G +G +F++ G V +GPV + P GAGK A A+ +++ L+Q+AAN++SFSLYAKLGF+ Y G ++ + S P G +K M DV C+EL H G +R DI L + + +D + YTTGF + GH++A S+D F +F
Sbjct: 23 ILHRAFSQFNLSVGIPPHV---DYGNVEIAKKVLHEMLQSPSSYGITAFDNASGLPIGAAFLNFT--GESVQAVGPVF-VDPDWNNKGAGKALMNALIERAKATNATSIRLVQIAANTQSFSLYAKLGFQPVECISYFEGSMDENLHSGASFIP---GFKVKMMEESDVHACSEL----HKSVLGHERETDIRELLQTNPGNSWVAVKDDI--LQAYTTGFCLEGHSIAISEDAFKTLF 246
BLAST of mRNA_Ecto-sp13_S_contig7925.19211.1 vs. uniprot
Match: A9SW47_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SW47_PHYPA) HSP 1 Score: 79.3 bits (194), Expect = 1.870e-13 Identity = 80/257 (31.13%), Postives = 121/257 (47.08%), Query Frame = 1
Query: 73 VVSKAFQDFNTSIRAPVEVYEEEFGHPEMGPGIIQSICKSHEAYAVVA-DGGAGKIVGVSFV---DVHAKGSRVACLGPVSSI----APGAGKKSFVAACAYAEELGFSTLVLMQVAANSRSFSLYAKLGFETKHTCQYIGGFL--EPPSEASLSPPPAP-SGVNLKAMVAEDVEDCAELFLVAHGKGCGWDRRADITGCLGSGAPFPMLVARDADGNVVGYTTGFYIMGHTVAKSQDIFCDMFRESSKMHQQAGLP 810
++S +F FN S+ P V E +++ + Y VVA + +G ++ F+ DV+A +GPV + GAGK VA ++ L QVAAN SF LYA LGF + G + E S A+ S +P +GV+++ M DV+ C EL H K G+DR I + +GA + + A G ++ YTTGF + GHTVA+S+++ MF E + A +P
Sbjct: 30 MISDSFLAFNQSVNIPPHVDGFTL---ETSRDLMKHFTSTPTMYGVVAVEESSGALMAGGFMYPGDVYA-------IGPVFADNAFKGRGAGKAVMVALIEKVRSENAKSIRLCQVAANPISFGLYASLGFVPVECWMDLEGNVTTEEASSANRSCGFSPVTGVDVRRMEEADVKCCNEL----HKKTMGFDREQRIRMDIPNGAAWVAVRA----GEIIAYTTGFILSGHTVAESEEVLAFMFTEVCHKTENASVP 268
BLAST of mRNA_Ecto-sp13_S_contig7925.19211.1 vs. uniprot
Match: R1DNJ0_EMIHU (Uncharacterized protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DNJ0_EMIHU) HSP 1 Score: 74.7 bits (182), Expect = 9.410e-12 Identity = 76/259 (29.34%), Postives = 106/259 (40.93%), Query Frame = 1
Query: 55 IDEVTHVVSKAFQDFNTSIRAPVEVYEEEFGHPEMGPGIIQSICKSHEAYAV-VADGGAGKIVGVSFVDVHAKGSRVACLGPVSSIAPGAGKKSFVAACAYAEELGFSTLVLMQVAANSRSFSLYAKLGFETKHTC-QYIGGFLEPPSEASLSPPPAPSGVNLKAMVAEDVEDCAELFLVAHGKGCGWDRRADITGCLGSGAPFPMLVARDADGNVVGYTTGFYIMGHTVAKSQDIFCDMFRESSKM---HQQAGLPCP 816
+DE + AF FN S+ E E P + S + V VA G +VG + ++ + GP++S PGAGK A +M+ AA + + TC +Y+G + AP+G +K + A DVE+C+ L H + C R DI +G P P VARD G VVGYTTG Y+ GHTVA S++ + S Q AG P P
Sbjct: 6 LDEAASIAFSAFNAFNESVGLAPEFPPREVVDV---PKYLYSSGLERPGFDVFVAVDEEGTVVGANMLEYQDGIGGIGXXGPIASKRPGAGKLLMQA--------------VMKAAAEHPACP---------RRTCIEYVG--------SGCCTAEAPAGFVVKPLAASDVEECSAL----HEQVCASRRMGDIGSAVGG--PHPNAVARDEAGKVVGYTTGSYLSGHTVALSEEALQALVVAQSAAIAAAQAAGAPIP 224
BLAST of mRNA_Ecto-sp13_S_contig7925.19211.1 vs. uniprot
Match: A0A6H5K2U2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2U2_9PHAE) HSP 1 Score: 67.8 bits (164), Expect = 4.300e-11 Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 1
Query: 724 MGHTVAKSQDIFCDMFRESSKMHQQAGLPCPR 819
MGHTVAKS DI CDMFRESSK+HQQAGLPCPR
Sbjct: 1 MGHTVAKSHDIICDMFRESSKLHQQAGLPCPR 32
BLAST of mRNA_Ecto-sp13_S_contig7925.19211.1 vs. uniprot
Match: UPI001F55A25F (GNAT family N-acetyltransferase n=2 Tax=Nostoc TaxID=1177 RepID=UPI001F55A25F) HSP 1 Score: 71.6 bits (174), Expect = 1.040e-10 Identity = 62/210 (29.52%), Postives = 100/210 (47.62%), Query Frame = 1
Query: 139 EFGHPEMGPGIIQSICKSHEAYAVVADGGAGKIVGVSFVDVHAKGSRVACLGPVSSIAPGA-----GKKSFVAACAYAEELGFSTLVLMQVAANSRSFSLYAKLGFETKHTCQYIGGFLEPPSEASLSPPPAPSGVNLKAMVAEDVEDCAELFLVAHGKGCGWDRRADITGCLGSGAPFPMLVARDADGNVVGYTTGFYIMGHTVAKSQD 753
+F E G ++ I Y+VVA+ G+++G +F+ +G +A +GP +++ P A G++ A E ++ + L+Q A NSRS SLY KLGF+ + G SL+ P G +++ M D+ C +L HG DR ++ +G G MLV + DG V GYT+ GH VA++ +
Sbjct: 84 DFPSAEFGAAMLTEILADPAVYSVVAEASDGRVIGSNFLW---EGDTIAGVGP-TTVDPAAQNRSVGRRLMEDVLQRAREKRYAGVRLVQAAHNSRSLSLYTKLGFDVREPLANFEG-----KPLSLTIP----GRSVRLMTEADLAVCNQLCDRIHGH----DRAGELKAAIGRGTA--MLV--ECDGRVSGYTSEIGFFGHAVAENNE 272 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7925.19211.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7925.19211.1 >prot_Ecto-sp13_S_contig7925.19211.1 ID=prot_Ecto-sp13_S_contig7925.19211.1|Name=mRNA_Ecto-sp13_S_contig7925.19211.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=274bp MTALELAFLDPKTIKDSQIDEVTHVVSKAFQDFNTSIRAPVEVYEEEFGHback to top mRNA from alignment at Ecto-sp13_S_contig7925:1190..5731- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7925.19211.1 ID=mRNA_Ecto-sp13_S_contig7925.19211.1|Name=mRNA_Ecto-sp13_S_contig7925.19211.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4542bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7925:1190..5731- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7925:1190..5731- >mRNA_Ecto-sp13_S_contig7925.19211.1 ID=mRNA_Ecto-sp13_S_contig7925.19211.1|Name=mRNA_Ecto-sp13_S_contig7925.19211.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=822bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7925:1190..5731- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |