mRNA_Ecto-sp13_S_contig7916.19197.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7916.19197.1 vs. uniprot
Match: D8LTD6_ECTSI (Protein kinase domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD6_ECTSI) HSP 1 Score: 371 bits (953), Expect = 1.660e-114 Identity = 195/205 (95.12%), Postives = 195/205 (95.12%), Query Frame = 1
Query: 1 PQDRAYLVKLADFGTADVDPLTVGNPVEACHFSTLENTPIEQLCCGNKAVQGYASDTFALALAAFHLFTGEAPYEEIMEEVECPDELYDALVQTWDQNPQYVDVCDIIINDAGDEEEDHXXXXXXXXXXXTQDPTLLHTFYRYLVLFGVPDRDRLEEAYGADNPVWKAVGPLLGWKQLRRGRGGRAAAASATASKKFCRQLDRDR 615
PQDRAYLVKLADFGTADVDPLTVGNPVEACHFSTLENTPIEQLCCGNKAVQGYASDTFALALAAFHLFTGEAPYEEIMEEVECPDELYDALVQTWDQNPQYVDVCDIIIND D XXXXXXXXXXXTQDPTLLHTFYRYLVLFGVPDRDRLEEAYG DNPVWKAVGPLLGWKQ RRGRGGRA AASATASKKFCRQLDRDR
Sbjct: 2083 PQDRAYLVKLADFGTADVDPLTVGNPVEACHFSTLENTPIEQLCCGNKAVQGYASDTFALALAAFHLFTGEAPYEEIMEEVECPDELYDALVQTWDQNPQYVDVCDIIINDGSD----XXXXXXXXXXXXTQDPTLLHTFYRYLVLFGVPDRDRLEEAYGTDNPVWKAVGPLLGWKQPRRGRGGRATAASATASKKFCRQLDRDR 2283
BLAST of mRNA_Ecto-sp13_S_contig7916.19197.1 vs. uniprot
Match: A0A835ZET0_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZET0_9STRA) HSP 1 Score: 181 bits (458), Expect = 6.490e-50 Identity = 113/275 (41.09%), Postives = 158/275 (57.45%), Query Frame = 1
Query: 7 DRAYLVKLADFGTADVDPLTVGNPVEACHFSTLENTPIEQLCCGNKAVQGYASDTFALALAAFHLFTGEAPYEEIMEEVECPDELYDALVQTWDQNPQYVDVCDIII----------NDAGDEEEDHXXXXXXXXXXXTQDPTLLHTFYRYLVLFGVPDRDRLEEAYGADN----PVWKAVGPLLGWKQLR-RGRGGRAAAASATASKKFCRQLDRDRAKFSLDRGKNKFVQRARARLQEVPGAMELVKSMASFLPAERPTMLEVLTSDVFKAFR 786
+ A L+KLADFGT+DV+ T P+ HF+TLENT E L G++AVQGYA DTFA LAA HLFTG+APYEE+M+EV+CP +L L + W + PQ+ D+++ +D DE+ED+ TL +T YRY VL GVP + ++ A++ +W+A +L +R + R G+ AA + + D+AKFS+ G + RAR R+ +PGA+ELV+SM FLP RPTML +L S+VF R
Sbjct: 245 NHAVLIKLADFGTSDVNSDTFNEPIGVDHFTTLENTAPELLLHGSQAVQGYALDTFAAGLAALHLFTGQAPYEELMDEVQCPAKLRVELRKAWSRAPQF----DVVVATNKRLMDSSSDESDEDEDN---------------TLYNTLYRYFVLLGVPGQSGVDSNSAAEHLQESSIWRAAVQVLVPSTVRGKTRKGQDAAVIS--------KFRTDQAKFSIATGTAPCMVRARGRMAAIPGALELVQSMLEFLPERRPTMLRLLKSEVFSGLR 492
BLAST of mRNA_Ecto-sp13_S_contig7916.19197.1 vs. uniprot
Match: A0A5D6Y0B4_9STRA (Protein kinase domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0B4_9STRA) HSP 1 Score: 179 bits (455), Expect = 8.850e-48 Identity = 111/267 (41.57%), Postives = 147/267 (55.06%), Query Frame = 1
Query: 1 PQDRAYLVKLADFGTADVDPLTVGNPVEACHFSTLENTPIEQLCCGNKAVQGYASDTFALALAAFHLFTGEAPYEEIMEEVECPDELYDALVQTWDQNPQYVDVCDIIINDAGDEEEDHXXXXXXXXXXXTQDPTLLHTFYRYLVLFGVPDRDRLEEAYGADNPVWKAVGPLL-----GWKQLRRGRGGRAAAASATASKKFCRQLDRDRAKFSLDRGKNKFVQRARARLQEVPGAMELVKSMASFLPAERPTMLEVLTSDVFKAFR 786
P AY +KLAD+GTA+ + T+G+PV F+TLENTPIE L G+ A Q +A DTF+L L+ HLFTG APYEEI+E V CP +L AL W NP+ ++ D+ E+ L HT YRYLVLFG+P+ GA+ VW+A+ L Q RR R A+A +A ++ Q ++DRA+FSL G +QR RARL+ PG +EL+ S+ F P +RPTM VL F A R
Sbjct: 710 PPTFAYWIKLADYGTAESNAETLGSPVALDQFTTLENTPIEYLLEGDAAEQSFAGDTFSLGLSLLHLFTGSAPYEEILESVRCPRDLLQALKYIW-TNPRKTSGFAVLRRVIKDDSEN----------------ILYHTLYRYLVLFGLPEETPTR---GAEK-VWQAIRKYLYPQEAAMTQTRRSRSATASARAAKSASSAANQFEQDRARFSLASGTEATIQRGRARLEAAPGGLELLSSLVHFDPTKRPTMKSVLLHPFFAALR 955
BLAST of mRNA_Ecto-sp13_S_contig7916.19197.1 vs. uniprot
Match: A0A4D9D2S7_9STRA (Protein kinase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2S7_9STRA) HSP 1 Score: 176 bits (446), Expect = 1.780e-46 Identity = 117/294 (39.80%), Postives = 151/294 (51.36%), Query Frame = 1
Query: 1 PQDRAYLVKLADFGTADVDPLTVGNPVEACHFSTLENTPIEQLCCGNKAVQGYASDTFALALAAFHLFTGEAPYEEIMEEVECPDELYDALVQTWDQNPQYVDVCDIIINDAGDEEEDHXXXXXXXXXXXTQDPTLLHTFYRYLVLFGVPDRDRLEEAYGAD---NPVWKAVGPLLG------------------WKQLRRGRGGRA-----------AAASATASKKFCRQLDRDRAKFSLDRGKNKFVQRARARLQEVPGAMELVKSMASFLPAERPTMLEVLTSDVFKAFR 786
P VKLADFGTAD+ P T+G PV F+TLENTP++ L G+ A Q +A+D F+L LA +HLF G PYEE+MEEV CP L AL + W + Y V ++ DEEED +D TL HTFYRYLVL G+P + E+ G NPVWKAV +G + R R RA AA+ T ++ RQ +D A FSL G + V R R RL +PGA L++++ +LP RP M E LTS++F R
Sbjct: 1936 PPSLPLCVKLADFGTADLAPETLGEPVGLDQFTTLENTPVDFLVLGDGAKQDFAADAFSLGLAVWHLFAGRQPYEELMEEVRCPPPLRRALNKAW-RGKGYT-VLRKVLEAGEDEEEDE------------EDCTLHHTFYRYLVLLGLPSAEEQRESTGRTRGLNPVWKAVASCIGPYSAGQGQEDKGTAAPIAFTMSTRKRTTRACVAGTPLPPSLAASDVTTKERVTRQYWQDHASFSLRYGSHPSVLRGRERLAALPGAFSLLRALLDYLPQRRPGMYEALTSELFACLR 2215
BLAST of mRNA_Ecto-sp13_S_contig7916.19197.1 vs. uniprot
Match: A0A3M6VC18_9STRA (Protein kinase domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VC18_9STRA) HSP 1 Score: 167 bits (423), Expect = 1.850e-43 Identity = 108/271 (39.85%), Postives = 151/271 (55.72%), Query Frame = 1
Query: 1 PQDRAYLVKLADFGTADVDPLTVGNPVEACHFSTLENTPIEQLCCGNKAVQGYASDTFALALAAFHLFTGEAPYEEIMEEVECPDELYDALVQTWDQNPQYVDVCDIIINDAGDEEEDHXXXXXXXXXXXTQDPTLLHTFYRYLVLFGVPDRDRLEEAYGADNPVWKAV-------GPLLGWKQLR--RGRGGRAAAASATASKKFCRQLDRDRAKFSLDRGKNKFVQRARARLQEVPGAMELVKSMASFLPAERPTMLEVLTSDVFKAFR 786
P +Y +KLADFG AD + T+G+PV F+TLEN+P+E L G+ A Q YA+DTF L L HLFTG APYEEI+E+V CP EL L W +P+ +I + A ++E+ TL HT YR++VLFG+P+R+ E VW+ + P L Q R R G +A A ++K Q D D++ +S+ G N V+R R LQ +PGAMEL+KS+ F PA+RPT+ +V+ +F +FR
Sbjct: 592 PASFSYWIKLADFGAADSNAETLGSPVTMDQFTTLENSPVEFLLEGDAAKQSYAADTFCLGLCVLHLFTGCAPYEEILEDVRCPIELLKDLKFIW-MSPRKNSGFSVIKSVARGDDEN----------------TLCHTLYRFIVLFGLPERNPSER--NEIEKVWQLLLKHLRPDDPALKHPQRRSRRTNGTSSAQLHALSTKS---QFDHDQSLYSITSGSNDVVRRCREGLQSIPGAMELLKSLVDFDPAKRPTLKQVMYHPIFSSFR 840
BLAST of mRNA_Ecto-sp13_S_contig7916.19197.1 vs. uniprot
Match: A0A425C203_9STRA (Protein kinase domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A425C203_9STRA) HSP 1 Score: 160 bits (404), Expect = 4.110e-43 Identity = 106/273 (38.83%), Postives = 147/273 (53.85%), Query Frame = 1
Query: 1 PQDRAYLVKLADFGTADVDPLTVGNPVEACHFSTLENTPIEQLCCGNKAVQGYASDTFALALAAFHLFTGEAPYEEIMEEVECPDELYDALVQTWDQNPQYVDVCDIIINDAGDEEEDHXXXXXXXXXXXTQDPTLLHTFYRYLVLFGVPDRDRLEEAYGADNPVWKAV-------GPLLG---WKQLRR-GRGGRAAAASATASKKFCRQLDRDRAKFSLDRGKNKFVQRARARLQEVPGAMELVKSMASFLPAERPTMLEVLTSDVFKAFR 786
P +Y +KL D+GTAD + +G+PV F+TLEN+P+E L G+ A Q YA+DTF L L HLFTG APYEEI+E+V CP EL L W +P+ +I + ++ D TL HT YR++VLFG+P R+ G D VW+ + P L W+ R G+ G AS+T S Q D D++ +S+ G N + R R LQ +PGAMEL+ S+ F PA+RPT+ +V+ VF +FR
Sbjct: 121 PASFSYWIKLGDYGTADSNTENLGSPVTMDQFTTLENSPVEFLLEGDAAKQSYAADTFCLGLCVLHLFTGCAPYEEILEDVRCPVELLKDLKFVW-MSPRKNSTFSVIKSVVRSDD----------------DNTLCHTLYRFVVLFGLPGRN----PSGIDK-VWQLLLKHLRPDDPALKHFQWRSRRSTGKDGAQLHASSTKS-----QFDHDQSLYSIASGSNDIICRCREGLQSIPGAMELLNSLVDFDPAKRPTLKQVMYHPVFSSFR 366
BLAST of mRNA_Ecto-sp13_S_contig7916.19197.1 vs. uniprot
Match: A0A8K1CDV1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDV1_PYTOL) HSP 1 Score: 160 bits (405), Expect = 4.330e-41 Identity = 101/262 (38.55%), Postives = 141/262 (53.82%), Query Frame = 1
Query: 1 PQDRAYLVKLADFGTADVDPLTVGNPVEACHFSTLENTPIEQLCCGNKAVQGYASDTFALALAAFHLFTGEAPYEEIMEEVECPDELYDALVQTWDQNPQYVDVCDIIINDAGDEEEDHXXXXXXXXXXXTQDPTLLHTFYRYLVLFGVPDRDRLEEAYGADNPVWKAVGPLLGWKQLRRGRGGRAAAASATASKKFCRQLDRDRAKFSLDRGKNKFVQRARARLQEVPGAMELVKSMASFLPAERPTMLEVLTSDVFKAFR 786
P +Y VKLAD+GTAD + +G PV F+TLENTPIE L G+ A Q +A+DTF+L L HLFTG APYEE++E V CP L L + W N + ++ A D+ +D L+HT YRYLV+ G+P + E + + +W + L ++ R R AA + K Q + DRAKFSL G N ++R R RL +PGA L++S+ +F PA+RPTM + L + F + R
Sbjct: 642 PATFSYWVKLADYGTADSNVEHLGKPVTLDQFTTLENTPIEFLLEGDAAQQSFAADTFSLGLCLLHLFTGSAPYEEVLESVRCPPALLQDLKRVWMSNKKNSGFS-VLRQVANDDPDD----------------ILMHTIYRYLVMLGMPHTNPSE--HKQIDRIWSILVKHLRPEESPSSRPSRRAAKMPMKTAK--EQFEEDRAKFSLANGNNPTIKRGRDRLSRIPGAQALLQSLVAFNPADRPTMKQTLQHEFFWSLR 882
BLAST of mRNA_Ecto-sp13_S_contig7916.19197.1 vs. uniprot
Match: A0A2D4CGF6_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGF6_PYTIN) HSP 1 Score: 160 bits (404), Expect = 7.050e-41 Identity = 104/268 (38.81%), Postives = 139/268 (51.87%), Query Frame = 1
Query: 1 PQDRAYLVKLADFGTADVDPLTVGNPVEACHFSTLENTPIEQLCCGNKAVQGYASDTFALALAAFHLFTGEAPYEEIMEEVECPDELYDALVQTWDQNPQYVDVCDIIINDAGDEEEDHXXXXXXXXXXXTQDPTLLHTFYRYLVLFGVPDRDRLEEAYGADNPVWKAV------GPLLGWKQLRRGRGGRAAAASATASKKFCRQLDRDRAKFSLDRGKNKFVQRARARLQEVPGAMELVKSMASFLPAERPTMLEVLTSDVFKAFR 786
P +Y VKLAD+GTAD +G PV F+TLENTPIE L G+ A Q +A+DTF+L L HLFTG PYEEI+E V CP L + + W +P+ ++ A D+ +D L+HT YRYLVLFG+P + E+ G D+ VW + P RR R G A T +F + DRA F LD G N+ + AR RL +PGA +L+ + SF P +RPT+ VL ++F R
Sbjct: 1309 PATFSYWVKLADYGTADSTVANLGKPVTLDQFTTLENTPIEFLLEGDVATQSFAADTFSLGLCLLHLFTGRGPYEEIVEPVRCPPALLQDIKRLW-MSPKKNSGFSVLKRVARDDPDD----------------VLIHTLYRYLVLFGLPANNP-SESRGIDH-VWSVLTRHLRPSPNEMEGAARRSRRGAAKPQGPTPKAQF----EEDRAAFGLDIGSNEIIAHARERLTSIPGATDLLTRLVSFDPTQRPTLKSVLQHEIFDTLR 1553
BLAST of mRNA_Ecto-sp13_S_contig7916.19197.1 vs. uniprot
Match: A0A7S2CK43_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CK43_9STRA) HSP 1 Score: 155 bits (393), Expect = 1.380e-40 Identity = 108/279 (38.71%), Postives = 147/279 (52.69%), Query Frame = 1
Query: 22 VKLADFGTADVDPLTVGNPVEACHFSTLENTPIEQLCCGNKAVQGYASDTFALALAAFHLFTGEAPYEEIMEEVECPDELYDALVQTWDQN------------PQYVDVCDIIINDAGDEEEDHXXXXXXXXXXXTQDPTLLHTFYRYLVLFGVPD---RDRLEE---------AYGADNPVWKAVGPLLGWKQLRRGRGGRAAAASATASKKFCRQLDRDRAKFSLDRGKNKFVQRARARLQEVPGAMELVKSMASFLPAERPTMLEVLTSDVFKAFR 786
VKLADFGTADV+ ++G+ V HF+TLEN+PIE L G+ A Q Y++DT+ L L+ H+FTG PYEE+MEEV CP L L++TW+ Q +V +++D E+ DPTL T YR+LVL GVP RD E AY +++PVW+ V +LG +Q R K R D DR+++SLD G ++ AR R+ ++ G + LVKSM F RPT+LEVL S F + R
Sbjct: 237 VKLADFGTADVNADSLGSLVGLDHFTTLENSPIEYLFLGSGAQQDYSADTWQLGLSMLHMFTGHKPYEELMEEVVCPAALRRRLMKTWEAGYSRRKSVDSHIWRQRFEVIRDVMSDGDASREESEL-----------DPTLADTLYRFLVLLGVPSLKARDGDVEDGGSHPAPPAYVSESPVWETVTAVLGPRQRR----------FTHEEKDIQRTFDLDRSRWSLDHGDRPIMEGARLRMDKL-GGLSLVKSMLCFESDTRPTLLEVLGSSFFVSLR 493
BLAST of mRNA_Ecto-sp13_S_contig7916.19197.1 vs. uniprot
Match: A0A0W8CCA6_PHYNI (Protein kinase domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CCA6_PHYNI) HSP 1 Score: 158 bits (400), Expect = 1.910e-40 Identity = 103/268 (38.43%), Postives = 141/268 (52.61%), Query Frame = 1
Query: 1 PQDRAYLVKLADFGTADVDPLTVGNPVEACHFSTLENTPIEQLCCGNKAVQGYASDTFALALAAFHLFTGEAPYEEIMEEVECPDELYDALVQTWDQNPQYVDVCDIIINDAGDEEEDHXXXXXXXXXXXTQDPTLLHTFYRYLVLFGVPDRDRLEEAYGADNPVWKAVGPLLGWKQLRRGRGGRAAAASATA------SKKFCRQLDRDRAKFSLDRGKNKFVQRARARLQEVPGAMELVKSMASFLPAERPTMLEVLTSDVFKAFR 786
P +Y VKLAD+G AD P +G PV HF+TLEN PIE L G+ A Q YA+DTF+L L HLFTG APYEEI+E +CP EL L W NP+ +I A ++E+ TL H YR++VLFG+P + E+ G D VWK + L + R R +A+A SK Q D D+A +S+ G + + R R L +PGAM L+K + F P++RPT+ +V+ +F + R
Sbjct: 588 PASFSYWVKLADYGAADSSPENLGKPVTIDHFATLENAPIEFLLEGDAAEQSYAADTFSLGLCLLHLFTGSAPYEEILEAAKCPAELLKDLKTLW-MNPRKNSKFSVIKKVAHGDDEN----------------TLYHALYRFIVLFGLP-AENPSESKGIDK-VWKLMIKHLRPEDSATKRPQRKCKLTASATKAQLHSKTAKEQFDHDQALYSIASGSDDIIYRCREGLMTIPGAMGLLKQLVDFNPSKRPTLKQVMYHPMFSSLR 836 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7916.19197.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7916.19197.1 >prot_Ecto-sp13_S_contig7916.19197.1 ID=prot_Ecto-sp13_S_contig7916.19197.1|Name=mRNA_Ecto-sp13_S_contig7916.19197.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=262bp PQDRAYLVKLADFGTADVDPLTVGNPVEACHFSTLENTPIEQLCCGNKAVback to top mRNA from alignment at Ecto-sp13_S_contig7916:2759..6976+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7916.19197.1 ID=mRNA_Ecto-sp13_S_contig7916.19197.1|Name=mRNA_Ecto-sp13_S_contig7916.19197.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4218bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7916:2759..6976+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7916:2759..6976+ >mRNA_Ecto-sp13_S_contig7916.19197.1 ID=mRNA_Ecto-sp13_S_contig7916.19197.1|Name=mRNA_Ecto-sp13_S_contig7916.19197.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=786bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7916:2759..6976+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |