mRNA_Ecto-sp13_S_contig7881.19156.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7881.19156.1
Unique NamemRNA_Ecto-sp13_S_contig7881.19156.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7881.19156.1 vs. uniprot
Match: A0A6H5KNF0_9PHAE (FtsJ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF0_9PHAE)

HSP 1 Score: 528 bits (1359), Expect = 1.590e-189
Identity = 259/260 (99.62%), Postives = 260/260 (100.00%), Query Frame = 1 
Query:    1 MGKRTKGQDRDKYYRLAKDQGFRARSAFKLIEINKKYDFLSSAKVCIDLCAAPGGWCQVAAKHMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQAVKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAFRQDYDVEGGQKGLSIFHKKYDQHNKRHRQGYADDLGMSLSRVAKV 780
            MGKRTKGQDRDKYYRLAKDQGFRARSAFKLIEINKKYDFLSSAKVCIDLCAAPGGWCQVAAKHMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQAVKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAF+QDYDVEGGQKGLSIFHKKYDQHNKRHRQGYADDLGMSLSRVAKV
Sbjct:    1 MGKRTKGQDRDKYYRLAKDQGFRARSAFKLIEINKKYDFLSSAKVCIDLCAAPGGWCQVAAKHMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQAVKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAFQQDYDVEGGQKGLSIFHKKYDQHNKRHRQGYADDLGMSLSRVAKV 260
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BLAST of mRNA_Ecto-sp13_S_contig7881.19156.1 vs. uniprot
Match: D7FSF8_ECTSI (Putative rRNA methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSF8_ECTSI)

HSP 1 Score: 529 bits (1363), Expect = 1.130e-179
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 1 
Query:    1 MGKRTKGQDRDKYYRLAKDQGFRARSAFKLIEINKKYDFLSSAKVCIDLCAAPGGWCQVAAKHMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQAVKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAFRQDYDVEGGQKGLSIFHKKYDQHNKRHRQGYADDLGMSLSRVAKV 780
            MGKRTKGQDRDKYYRLAKDQGFRARSAFKLIEINKKYDFLSSAKVCIDLCAAPGGWCQVAAKHMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQAVKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAFRQDYDVEGGQKGLSIFHKKYDQHNKRHRQGYADDLGMSLSRVAKV
Sbjct:    1 MGKRTKGQDRDKYYRLAKDQGFRARSAFKLIEINKKYDFLSSAKVCIDLCAAPGGWCQVAAKHMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQAVKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAFRQDYDVEGGQKGLSIFHKKYDQHNKRHRQGYADDLGMSLSRVAKV 260
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BLAST of mRNA_Ecto-sp13_S_contig7881.19156.1 vs. uniprot
Match: A0A835Z2H0_9STRA (Putative rRNA methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2H0_9STRA)

HSP 1 Score: 416 bits (1069), Expect = 2.170e-136
Identity = 200/260 (76.92%), Postives = 228/260 (87.69%), Query Frame = 1 
Query:    1 MGKRTKGQDRDKYYRLAKDQGFRARSAFKLIEINKKYDFLSSAKVCIDLCAAPGGWCQVAAKHMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQAVKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAFRQDYDVEGGQKGLSIFHKKYDQHNKRHRQGYADDLGMSLSRVAKV 780
            MGKRTKGQDRDKYY LAKDQG+RARSAFKLIEINK++DFLS AKV IDLCAAPGGWCQVAAK+MP+G IILGVDLLPIRPIPNVKTL+ DITT+ECR+ +K+E+QTW+ADVVLCDGAPNVGTAY KDAY QNEIAL AL+VATQHL KGGTFVTKVYRSQDYN+L+W +QQFF+ +QAVKPASSRSQSAEIF+VG  YK PD ID RML+PKH F Q Y+ EG  K +S+FHKK+D+HNKRHR GY + LG  L+R   +
Sbjct:    1 MGKRTKGQDRDKYYHLAKDQGYRARSAFKLIEINKRHDFLSKAKVVIDLCAAPGGWCQVAAKNMPKGGIILGVDLLPIRPIPNVKTLISDITTEECRSMIKKELQTWRADVVLCDGAPNVGTAYAKDAYVQNEIALAALKVATQHLMKGGTFVTKVYRSQDYNALLWTVQQFFDSYQAVKPASSRSQSAEIFIVGMGYKDPDQIDPRMLDPKHIFDQGYE-EGMNKSISVFHKKFDKHNKRHRSGYDESLGQLLTRKGTI 259
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BLAST of mRNA_Ecto-sp13_S_contig7881.19156.1 vs. uniprot
Match: K8YV02_NANGC (Et-dependent rrna methyltransferase spb1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YV02_NANGC)

HSP 1 Score: 333 bits (853), Expect = 1.070e-108
Identity = 173/261 (66.28%), Postives = 200/261 (76.63%), Query Frame = 1 
Query:    7 KRTKGQDRDKYYRLAKDQGFRARSAFKLIEINKKYDFLSSAKVCIDLCAAPGGWCQVAAKHMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWK-ADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQAVKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAFRQDYDVEGGQ--KGLSIFHKKYDQHNKRHRQGYADDLGMSLSRVAKV 780
            KR K  D+DKYY LAK+QG+R+R+AFKLI+IN+KYDFLS AKVC+DLCAAPGGWCQVAAKHMP  SIILGVDLLPIRPI  VKTLVHDITT ECR A+KREM+     DVVLCDGAPNVG  Y KDA+ QNEIAL ALR AT HL  GGTF+TKVYRSQDYN+LMWV  Q F   QA+KP+SSR QSAEIFV+   YKAP  ID ++L+P + F +   +EGG   K +SIF  +Y +  KRHR GY  + G+ L R A V
Sbjct:    6 KRKKRHDKDKYYHLAKEQGYRSRAAFKLIQINRKYDFLSKAKVCLDLCAAPGGWCQVAAKHMPSDSIILGVDLLPIRPIAKVKTLVHDITTPECRAAVKREMRAHPHVDVVLCDGAPNVGATYDKDAFVQNEIALAALRAATCHLGPGGTFLTKVYRSQDYNALMWVFNQLFASVQAIKPSSSRQQSAEIFVLCLRYKAPHSIDPKLLDPAYVFAE---MEGGSGDKAISIFSAQYAR-QKRHRSGYDGEAGVLLHRKASV 262
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BLAST of mRNA_Ecto-sp13_S_contig7881.19156.1 vs. uniprot
Match: A0A1V9YJQ3_9STRA (rRNA methyltransferase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YJQ3_9STRA)

HSP 1 Score: 324 bits (831), Expect = 1.130e-107
Identity = 166/261 (63.60%), Postives = 202/261 (77.39%), Query Frame = 1 
Query:    1 MGKRTKGQDRDKYYRLAKDQGFRARSAFKLIEINKKYDFLSSAKVCIDLCAAPGGWCQVAAKHMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQAVKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAFRQ-DYDVEGGQKGLSIFHKKYDQHNKRHRQGYADDLGMSLSRVAKV 780
            M KR K  D+DKYY LA+ QG+RARSAFKLI++NKKYDFLS AKVCIDLCAAPGGWCQVAAK+MP  SIILG+DLLPIRPI  VKT   DITT  CR  +++EMQ+W ADVVLCDGAPNVG  Y KDAY QNE+AL AL++A   + KG TFV+KV+RSQDYN+L+WV +Q F++  A KP SSR++SAEIFVV  +Y AP  ID ++L+P+H F Q + D E G   L+IFH K+ Q  KRHR+GY D LG +L++V  V
Sbjct:    1 MVKRKK-HDKDKYYNLARQQGYRARSAFKLIQLNKKYDFLSKAKVCIDLCAAPGGWCQVAAKYMPASSIILGIDLLPIRPIRGVKTYQCDITTARCRQIIRQEMQSWNADVVLCDGAPNVGAEYSKDAYVQNELALIALKLAVDVMGKGATFVSKVFRSQDYNALVWVFKQLFKKVSATKPLSSRNESAEIFVVCEDYIAPHSIDPKLLDPEHVFSQLEKDKESG---LTIFHPKFGQ-QKRHREGYDDALGQTLTKVLTV 256
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BLAST of mRNA_Ecto-sp13_S_contig7881.19156.1 vs. uniprot
Match: A0A3R7WEH2_9STRA (FtsJ domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7WEH2_9STRA)

HSP 1 Score: 315 bits (806), Expect = 7.360e-105
Identity = 164/261 (62.84%), Postives = 198/261 (75.86%), Query Frame = 1 
Query:    1 MGKRTKGQDRDKYYRLAKDQGFRARSAFKLIEINKKYDFLSSAKVCIDLCAAPGGWCQVAAKHMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQAVKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAFRQDYDVEGGQKGLSIFHKKYDQHNKRHRQGYA---DDLGMSLSRVA 774
            M KR K  D+DKYY LA+ QG+RARSAFKLI++NKKYDFLS AKVCIDLCAAPGGWCQVAAK+MP  SIILG+DLLPIRPI  VKT   DITT  CR  +K+EMQ+W ADVVLCDGAPNVG+ Y KDAY QNE+AL AL++A   + KGGTFV+KV+RSQDYN+L+WV +Q F++  A KP SSR++SAEIFVV  +Y AP  ID ++L+P+H F Q    +     L+IFH KY Q  KRHR+G       +  SLSRV+
Sbjct:    1 MVKRKK-HDKDKYYNLARQQGYRARSAFKLIQLNKKYDFLSKAKVCIDLCAAPGGWCQVAAKYMPASSIILGIDLLPIRPIRGVKTYECDITTARCRQIIKQEMQSWSADVVLCDGAPNVGSEYSKDAYVQNELALIALKLAVDVMGKGGTFVSKVFRSQDYNALLWVFKQLFKKVSATKPLSSRNESAEIFVVCEDYLAPHSIDPKLLDPEHVFAQLEKEKDS--ALTIFHPKYGQ-QKRHREGNVVAFSVMSASLSRVS 257
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BLAST of mRNA_Ecto-sp13_S_contig7881.19156.1 vs. uniprot
Match: A0A6G0X934_9STRA (Putative rRNA methyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X934_9STRA)

HSP 1 Score: 332 bits (850), Expect = 1.650e-104
Identity = 170/263 (64.64%), Postives = 203/263 (77.19%), Query Frame = 1 
Query:    1 MGKRTKGQDRDKYYRLAKDQGFRARSAFKLIEINKKYDFLSSAKVCIDLCAAPGGWCQVAAKHMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQAVKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAFRQ---DYDVEGGQKGLSIFHKKYDQHNKRHRQGYADDLGMSLSRVAKV 780
            M KR K  D+DKYY LA+ QG+RARSAFKLI+INKKYDFLS AKVCIDLCAAPGGWCQVAAK+MP  SIILG+DLLPIRPI  VKT   DITT  CR  +K+EMQ+W ADVVLCDGAPNVG+ Y KDAY QNE+AL AL++A   + KG TFV+KV+RSQDYNSL+WV +Q F++  A KP SSR++SAEIFVV  +Y AP  ID ++L+P+H F Q   D D      GL+IFH KY Q  KRHR+GY D LG++L+R+  V
Sbjct:    1 MVKRKK-HDKDKYYNLARQQGYRARSAFKLIQINKKYDFLSKAKVCIDLCAAPGGWCQVAAKYMPASSIILGIDLLPIRPIRGVKTYECDITTARCRQIIKQEMQSWSADVVLCDGAPNVGSEYSKDAYVQNELALVALKLAVDVMGKGATFVSKVFRSQDYNSLLWVFKQLFKKVSATKPLSSRNESAEIFVVCEDYLAPHSIDPKLLDPEHVFAQLEKDKDT-----GLTIFHPKYGQ-QKRHREGYDDSLGLTLTRILTV 256
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7881.19156.1 vs. uniprot
Match: W7TSJ8_9STRA (Putative rRNA methyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSJ8_9STRA)

HSP 1 Score: 333 bits (853), Expect = 1.040e-103
Identity = 173/261 (66.28%), Postives = 200/261 (76.63%), Query Frame = 1 
Query:    7 KRTKGQDRDKYYRLAKDQGFRARSAFKLIEINKKYDFLSSAKVCIDLCAAPGGWCQVAAKHMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWK-ADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQAVKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAFRQDYDVEGGQ--KGLSIFHKKYDQHNKRHRQGYADDLGMSLSRVAKV 780
            KR K  D+DKYY LAK+QG+R+R+AFKLI+IN+KYDFLS AKVC+DLCAAPGGWCQVAAKHMP  SIILGVDLLPIRPI  VKTLVHDITT ECR A+KREM+     DVVLCDGAPNVG  Y KDA+ QNEIAL ALR AT HL  GGTF+TKVYRSQDYN+LMWV  Q F   QA+KP+SSR QSAEIFV+   YKAP  ID ++L+P + F +   +EGG   K +SIF  +Y +  KRHR GY  + G+ L R A V
Sbjct:    6 KRKKRHDKDKYYHLAKEQGYRSRAAFKLIQINRKYDFLSKAKVCLDLCAAPGGWCQVAAKHMPSDSIILGVDLLPIRPIAKVKTLVHDITTPECRAAVKREMRAHPHVDVVLCDGAPNVGATYDKDAFVQNEIALAALRAATCHLGPGGTFLTKVYRSQDYNALMWVFNQLFASVQAIKPSSSRQQSAEIFVLCLRYKAPHSIDPKLLDPAYVFAE---MEGGSGDKAISIFSAQYAR-QKRHRSGYDGEAGVLLHRKASV 262
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7881.19156.1 vs. uniprot
Match: A0A067C154_SAPPC (Putative rRNA methyltransferase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C154_SAPPC)

HSP 1 Score: 328 bits (842), Expect = 2.290e-103
Identity = 167/261 (63.98%), Postives = 202/261 (77.39%), Query Frame = 1 
Query:    1 MGKRTKGQDRDKYYRLAKDQGFRARSAFKLIEINKKYDFLSSAKVCIDLCAAPGGWCQVAAKHMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQAVKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAFRQ-DYDVEGGQKGLSIFHKKYDQHNKRHRQGYADDLGMSLSRVAKV 780
            M KR K  D+DKYY LA+ QG+RARSAFKLI++NKKYDFLS AKVCIDLCAAPGGWCQVAAK+MP  SIILG+DLLPIRPI  VKT   DITT  CR  +++EMQ+W ADVVLCDGAPNVG  Y KDAY QNE+AL AL++A   + KG TFV+KV+RSQDYN+L+WV +Q F++  A KP SSR++SAEIFVV  +Y AP  ID ++L+P+H F   + D EGG   L+IFH KY    KRHR+GY DDLG +L+RV  +
Sbjct:    1 MVKRKK-HDKDKYYNLARQQGYRARSAFKLIQLNKKYDFLSKAKVCIDLCAAPGGWCQVAAKYMPASSIILGIDLLPIRPIRGVKTYQCDITTARCRQIIRQEMQSWNADVVLCDGAPNVGAEYSKDAYVQNELALIALKLAVDVMGKGATFVSKVFRSQDYNALVWVFKQLFKKVSATKPLSSRNESAEIFVVCEDYLAPHSIDPKLLDPEHVFSALEKDAEGG---LTIFHPKYGT-QKRHREGYDDDLGQTLTRVKTI 256
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7881.19156.1 vs. uniprot
Match: A0A5D6Y2J9_9STRA (Putative rRNA methyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2J9_9STRA)

HSP 1 Score: 328 bits (842), Expect = 2.580e-103
Identity = 164/260 (63.08%), Postives = 205/260 (78.85%), Query Frame = 1 
Query:    1 MGKRTKGQDRDKYYRLAKDQGFRARSAFKLIEINKKYDFLSSAKVCIDLCAAPGGWCQVAAKHMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQAVKPASSRSQSAEIFVVGRNYKAPDFIDSRMLEPKHAFRQDYDVEGGQKGLSIFHKKYDQHNKRHRQGYADDLGMSLSRVAKV 780
            M KR K  D+DKYY LA+ QG+RARSAFKLI++NKKYDFLS+AKVCIDLCAAPGGWCQVAAK+MP  SII+G+DLLPIRPI  VKT   DITT +CR  +K+EMQ+W+ADVVLCDGAPNVG  Y KDAY QNE+AL AL++A   + +GGTFV+KV+RSQDYN+L+WV +Q F++  A KP SSR++SAEIFVV  +Y AP  IDS++ +PK+ F Q   VE  +K ++IFH K+    KRHR+GY D LGM+L+  + V
Sbjct:    1 MVKRKK-HDKDKYYNLARQQGYRARSAFKLIQLNKKYDFLSTAKVCIDLCAAPGGWCQVAAKYMPASSIIIGIDLLPIRPIRGVKTFQCDITTAKCRQIIKQEMQSWQADVVLCDGAPNVGAEYTKDAYVQNELALVALKLAVDVMGRGGTFVSKVFRSQDYNALLWVFKQLFKKVSATKPLSSRNESAEIFVVCEDYLAPHSIDSKLFDPKYVFDQ---VESQEKSITIFHPKFGD-RKRHREGYDDALGMTLTNESSV 255
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7881.19156.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNF0_9PHAE1.590e-18999.62FtsJ domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FSF8_ECTSI1.130e-179100.00Putative rRNA methyltransferase n=1 Tax=Ectocarpus... [more]
A0A835Z2H0_9STRA2.170e-13676.92Putative rRNA methyltransferase n=1 Tax=Tribonema ... [more]
K8YV02_NANGC1.070e-10866.28Et-dependent rrna methyltransferase spb1 (Fragment... [more]
A0A1V9YJQ3_9STRA1.130e-10763.60rRNA methyltransferase (Fragment) n=1 Tax=Thrausto... [more]
A0A3R7WEH2_9STRA7.360e-10562.84FtsJ domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A6G0X934_9STRA1.650e-10464.64Putative rRNA methyltransferase n=1 Tax=Aphanomyce... [more]
W7TSJ8_9STRA1.040e-10366.28Putative rRNA methyltransferase n=2 Tax=Monodopsid... [more]
A0A067C154_SAPPC2.290e-10363.98Putative rRNA methyltransferase n=3 Tax=Saprolegni... [more]
A0A5D6Y2J9_9STRA2.580e-10363.08Putative rRNA methyltransferase n=1 Tax=Pythium br... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7881contigEcto-sp13_S_contig7881:794..4968 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score533.9
Seed ortholog evalue4.2e-149
Seed eggNOG ortholog2880.D7FSF8
Preferred nameSPB1
Model size780
KEGG koko:K14857
Hectar predicted targeting categoryother localisation
GOsGO:0000154,GO:0000460,GO:0000463,GO:0000466,GO:0000470,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008650,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0030684,GO:0030687,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042273,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360,GO:1990904
Exons5
EggNOG free text desc.Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily
EggNOG OGsCOG0293@1,KOG1098@2759
Cds size780
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464059.0159204-CDS-Ecto-sp13_S_contig7881:793..9061681464059.0159204-CDS-Ecto-sp13_S_contig7881:793..906Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7881 794..906 -
1681464059.0268571-CDS-Ecto-sp13_S_contig7881:1393..15291681464059.0268571-CDS-Ecto-sp13_S_contig7881:1393..1529Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7881 1394..1529 -
1681464059.0375972-CDS-Ecto-sp13_S_contig7881:2769..29761681464059.0375972-CDS-Ecto-sp13_S_contig7881:2769..2976Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7881 2770..2976 -
1681464059.047151-CDS-Ecto-sp13_S_contig7881:4378..46061681464059.047151-CDS-Ecto-sp13_S_contig7881:4378..4606Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7881 4379..4606 -
1681464059.0573893-CDS-Ecto-sp13_S_contig7881:4872..49681681464059.0573893-CDS-Ecto-sp13_S_contig7881:4872..4968Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7881 4873..4968 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7881.19156.1prot_Ecto-sp13_S_contig7881.19156.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7881 794..4968 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7881.19156.1

>prot_Ecto-sp13_S_contig7881.19156.1 ID=prot_Ecto-sp13_S_contig7881.19156.1|Name=mRNA_Ecto-sp13_S_contig7881.19156.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=260bp
MGKRTKGQDRDKYYRLAKDQGFRARSAFKLIEINKKYDFLSSAKVCIDLC
AAPGGWCQVAAKHMPRGSIILGVDLLPIRPIPNVKTLVHDITTDECRTAL
KREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLKKGG
TFVTKVYRSQDYNSLMWVIQQFFEEHQAVKPASSRSQSAEIFVVGRNYKA
PDFIDSRMLEPKHAFRQDYDVEGGQKGLSIFHKKYDQHNKRHRQGYADDL
GMSLSRVAKV
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mRNA from alignment at Ecto-sp13_S_contig7881:794..4968-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7881.19156.1 ID=mRNA_Ecto-sp13_S_contig7881.19156.1|Name=mRNA_Ecto-sp13_S_contig7881.19156.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4175bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7881:794..4968- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGGAAGCGGACCAAGGGACAAGATCGCGATAAGTACTACCGCTTAGC
CAAGGACCAGGGCTTTCGTGCGCGTTCGGCGTTTAAGCTCATCGAGGTGG
GTGTGGCAGAGTGGCAGAGAGTTGTGCCCTCCAACAACACGCGGCCCAAT
CGCGCCACTTTTTGTGTGGCCGGCACACGCTGCTCTTTCTGCTGCTATGT
GCCTGGACAGGATAAGCCACCTTCGCGTGCTCGGCCACGCAAGGGTCCAG
GGTTGCTGCCCCCTCGTCGTACCATCCTACACATAGTGTGTTTCTCGTCG
TCTTACCATTTACGTGTACCACTGCCCTCTCTCTCTCTCGCTGATGGTGC
TGCTGCGCGCAGATCAACAAGAAGTATGACTTCCTCAGTTCGGCCAAGGT
TTGCATCGACCTGTGCGCTGCCCCCGGCGGGTGGTGCCAGGTGGCCGCAA
AGCACATGCCTCGCGGGAGCATCATCCTCGGCGTGGACCTGCTGCCCATC
CGCCCCATCCCGAACGTGAAGACGCTGGTTCACGACATCACCACGGACGA
GTGCCGCACGGCCCTCAAGCGCGAGATGCAGACTTGGAAGGTGAGAGCCA
TAGCCTGAAGGGTGCTCGCTGTGTTGTACACAGAGGTTGCAGCAAATGGG
AAGGGCATCATCGCATACGCTGCCGGCAGAATGCCTGGCGATCCAGCGCC
CGTGTGTACTGCTGTGTTCCCATCTCGGGCATAAAGTACTTTGCTCTATC
TCCCCTCTTCGAGTTGTATGTCGTATCATGTTTTTCTTTGAGTGGCTGTC
AACAATCTTTTGTGCCATAGATTGCAGGAGATATCACACCCTGTGGACCG
GCTTGAAAGCTCAATCACAAGTACGCAGGTGCGATGAAGGAAACGATTCG
GTGCCAAAAATATCTCCACGAAAAGGTTCTTATGCCGCCGCTGTCGGCAC
TGCCAACTCTGCTGTGGAGAAAATCGAGCTTTGAAAACCGGTCCAGGTGG
TGGGTGGTATTTGGCGTCACCTCCCGTGACAACACCGCTGCTGGTTGTGC
TCTCAACTAATATGCAGACGACAGAGTTCTCTGTCTCTCGACTGCACTGT
GGGAAACAATCAATGTACGCCGACAATCGGAGGTGGCCGTGCCCCTTGCA
GTAGGCGCTGCCAACTCTTCAGAGTACCGAAACAATACTTCCGAGACACG
GGTGTTTGGGTACCCTTTGGCCCTCAGTTGCGGTGTTGTGCATTAGCACT
CTCTCAAGAGCCGAAAAAACACGCCCTGATATTATGCAAGGAAGTAGATA
ATTAGAGCCCGGTACTACTGTTCGTTTTTAATGATCCAGGTGCATGCGTT
GTTTCGTGATGGCGAGTTCCGGTGAAGATTTTGTTGCTTTTTTATTCATG
GTATTGTTCTCCACGAAAGTAGGCGCGTGTGGTGGTTTGCCGCGGCGCGA
CCCGGCGCGCAAACACCATTTTCGCTTGTTTTTGGAAGCATCGTCGTCAC
CAACTCAGGTGGTCGTTGTGCGTGTTCATCAATGGGGCACCCCCATGAAG
TCTAGATACTTCGCATGAAAAGGCGGCAAGTGATGTCGAATAGATGAGCA
GACTAGAGGCGACATTTTTGAGCCACCTTTGGCAAAGTCGCAAAGAACGA
GTGGCAATCGGTGACCGGTCCTGTTGGAACAGTGCCCCGTCTTCTCGAAA
TCGCGTGGTCAATGGCCCTAAGATTAAAGGCATGCAAAACGTTAGCGTAC
GCCCATCAAGCCTACATGGTTCGCACGAAAAATGTTCATGTGTTATTTGT
CTTGGGGAAACCAGGAGGATGTGGTGCTCCGTAACCGCGCGCCCCCGCAC
GCAAGCACTACTGCTTCGTTTTTTGAAGCATCGTCGTCGCCAAATCTGGT
TGACATTTCACCAACCGCGCTCCCCCACCAAACCTCAATACTGCTCATGA
CAACACGTACCTTTCTTGTTTTTTTTTTCCTTGGCAAACCAGGCGGATGT
GGTGCTCTGTGACGGCGCCCCGAACGTGGGTACCGCCTATAAGAAGGATG
CATACGAGCAGAACGAAATCGCTCTCCACGCGCTTCGGGTGGCCACTCAG
CACCTCAAGAAAGGTGGTACCTTCGTGACCAAGGTGTACCGGTCCCAGGA
CTACAACTCGCTCATGTGGGTCATCCAGCAGTTCTTCGAAGAACACCAGG
TGAGCATATCGTATCGTGGCAGCAGCAGCGGCACGATGTCCTTCTTTTGG
ATGAAGCAGTGGTTGTTGGTTGTTGGTCGCCCTGTATCAGGCAGGGACAT
GAGTCCTTTATGTTGTTGTCTTTTTGCTGTCTTCTTGGATGTAGCACTGC
TTGGAGCCCTGTATCAGGCAGGATAAACGGTAAGAAGTCTTTTGTGTAAT
GATGTTGTCTGGAACATTGAAAAGTTCCGGTCTCCTCTTGGTAAATTCGA
ATACCCGCACTGGTCCAACTGACGCCAATGCCTTCCGTGGTCACAAGCCA
ACTACCCACCAAAGGGGCGCACCTTCCAAAAAAGTAAAAATGTATGAGGA
CCAGGTATTTACCACCAAACGCGGTAATAGGAATTGTAAAGGGTGTACCA
CACGTGCTTACAGGAAGAGCCCGTTCACGGTGATTCTACAAGGAATCACT
GAAAGAGCGCAGGTCCGACAGAACCCGATGGTAGGATGTGCAGCGTTGAT
GTACGCGTCACTGTTGAGTCGGTCTCAATTTGGTGGCACTTCTTTTACGC
GCGTACGTTTCTGCTTTGGGTGGTTGTTTTACCGGCCGCATGCTGTGAAT
CCGGCCTCGAGTCCCATTCAGATCGCAGAGATGTACGCCGCGTGTGCAGT
CAGTCTCCGGTGGGTGGCACGTTCTCCATATACCGACGCTTGTATTTTTT
TTTTGTTGTTTTTTACCGGTTACAGGCTGTGACGCCGGCCCCAAGTCGTA
GTCAGATGACGGAGAATGTACCCATTTAACCTTCGTGTGCAGTCAGTCTC
CTTTGGGTGGCCCGCTTTCAATTTGTACATGAACCGAAAACACAACTCAG
TGATGACATGTCCCAGATCCCTTGCATATCAGGTCTGTTGATGCGGAACA
CTGCACCTTTTGATGTAGTCGAATCCATGAATGAAAAGCCGGACAAGATC
GAATCTACCAGGAGGTGAAACGTTCTGCATGAACAGGCCCGTTTTGCAAG
GGATCTGTAACATGTTCGTCACTGTGGGGATTTCTTATCATTTATTGACA
TACCTATGTATACCTGCTGCTTGTCTCACATACCCACGCTGCTGTTATTT
ATTTGTTACCGCCCGCAGGCTGTGAAGCCCCCCTCGAGACGAAGTCCTAC
AGCACAGATTTACCACTGATCGCGTGCAGTCAGTCTTTTGTGTCTTGCTC
TTAACTCACCGATGTTACTGTTTTTTTTACCGCCTGCAGGCGGTGAAGCC
CGCCTCTAGTCGAAGTCAGTCGGCAGAAATCTTCGTGGTGGGCCGCAACT
ATAAGGCCCCCGACTTCATCGACTCCCGCATGCTCGAGCCGAAGCATGCC
TTCCGACAGGACTACGACGTCGAAGGTGAGTCCGAAGGGCCTTGCGTTGT
CGTAGCGGTGACTCAACCATCGGCGCATGGGCGGTTCGATATTGATGGAT
GTACGTATACGTGCAAGAGAGAGTCAACATGGATTGCCACGGCCGTAGTG
TAGAAGCTACGGTTGGAGATTTACCGGTACTTGATCAGGAAGTACGGGAA
CATGACGTGGAACGTCAGTCCAAGCGACCTCTTGTTATGGTTTTACATAG
AGTTGGCATAATGTAGTGACGGTTGAGATCTCGTGACAGACGAATATTCG
AGTTGTTTTACACGTTCAACGATGTGGGTTAGTATGGCTGGCACCTGCCG
TCATCATAGCTGAAACACTGCTGTATTCCTACTAAGGAGAAGGGTTCCTC
ACCGTCGCCGTTGTTCACGTCCTGCGGTGCTTGCTCTCTAAAGAAGAATC
ATTGAGCATCATGCCGCGTACGTTTTGAAACATGGCCGCTGCAACTTGCG
ATTCCGCCGCAGGAGGTCAGAAGGGTCTGTCAATCTTCCACAAGAAGTAC
GATCAGCACAACAAGCGTCACCGTCAGGGGTACGCGGACGACCTAGGCAT
GAGCCTCAGCAGGGTTGCGAAGGTC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7881:794..4968-

>mRNA_Ecto-sp13_S_contig7881.19156.1 ID=mRNA_Ecto-sp13_S_contig7881.19156.1|Name=mRNA_Ecto-sp13_S_contig7881.19156.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=780bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7881:794..4968- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGGAAGCGGACCAAGGGACAAGATCGCGATAAGTACTACCGCTTAGC
CAAGGACCAGGGCTTTCGTGCGCGTTCGGCGTTTAAGCTCATCGAGATCA
ACAAGAAGTATGACTTCCTCAGTTCGGCCAAGGTTTGCATCGACCTGTGC
GCTGCCCCCGGCGGGTGGTGCCAGGTGGCCGCAAAGCACATGCCTCGCGG
GAGCATCATCCTCGGCGTGGACCTGCTGCCCATCCGCCCCATCCCGAACG
TGAAGACGCTGGTTCACGACATCACCACGGACGAGTGCCGCACGGCCCTC
AAGCGCGAGATGCAGACTTGGAAGGCGGATGTGGTGCTCTGTGACGGCGC
CCCGAACGTGGGTACCGCCTATAAGAAGGATGCATACGAGCAGAACGAAA
TCGCTCTCCACGCGCTTCGGGTGGCCACTCAGCACCTCAAGAAAGGTGGT
ACCTTCGTGACCAAGGTGTACCGGTCCCAGGACTACAACTCGCTCATGTG
GGTCATCCAGCAGTTCTTCGAAGAACACCAGGCGGTGAAGCCCGCCTCTA
GTCGAAGTCAGTCGGCAGAAATCTTCGTGGTGGGCCGCAACTATAAGGCC
CCCGACTTCATCGACTCCCGCATGCTCGAGCCGAAGCATGCCTTCCGACA
GGACTACGACGTCGAAGGAGGTCAGAAGGGTCTGTCAATCTTCCACAAGA
AGTACGATCAGCACAACAAGCGTCACCGTCAGGGGTACGCGGACGACCTA
GGCATGAGCCTCAGCAGGGTTGCGAAGGTC
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