mRNA_Ecto-sp13_S_contig784.19100.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig784.19100.1
Unique NamemRNA_Ecto-sp13_S_contig784.19100.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig784.19100.1 vs. uniprot
Match: A0A6H5KXM6_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXM6_9PHAE)

HSP 1 Score: 667 bits (1722), Expect = 3.180e-232
Identity = 333/355 (93.80%), Postives = 338/355 (95.21%), Query Frame = 1
Query:    1 LLPPEGDHDIPVFEEVPDGQFVDATPLKPPYRCDAVTQYFWGRAVDVQKVVKHMVSGVPCVTITGQKGIGKTQVLLKACAYTRERNVFGEIFFCRLDRAVGGNDACNWLEQGFQLPAGSLVAHNMDGVVAKISQHVRDQLQALREQGSHPSRRALLVLDGCSQPVVMVGEERFFLSRLLSRLVDVLRTEGVTLTTAVTMRAKGPMAPGRVGVPGEKTVVVEPLDARSTAELFVMCCSRNLSVCEMGPSKPEPFTGTEGKADSYESFAKSDIVLALRGHPGCVQDLCRCPRVHEEKGLIVHREKLLREDIPKLQ------------EQYAYPDEPISRTISIDTPPLVPKEVVQET 1029
            LLP EGDHDIPVFEEVPDGQFVDATPLKPPYRCDAVTQYFWGRAVDVQKVVKHMVSGVPCVTITGQKGIGKTQVLLKACAYTRERNVFGEIFFCRLDRAVGGNDACNWLEQGFQLPAGSLVAHNMDGVVAKISQHVRD LQAL+EQGSHPSRRALLVLDGCSQPVVMVGEERFFLSRLLSRLVDVLRTEGVTLTTAVTMRAKGPMAPGRVGVPGEKTVVV+PLDARSTAELFVMCCSRNLSVCEMGPSKPEPFTGTEGKADSYESFAKSDIVLALRGHPGCVQDLCRCPRVHEEKGLIVHREKLLREDIPK +            EQYAYPDEP+ R ISIDTPPLVP+EVVQET
Sbjct:  390 LLPLEGDHDIPVFEEVPDGQFVDATPLKPPYRCDAVTQYFWGRAVDVQKVVKHMVSGVPCVTITGQKGIGKTQVLLKACAYTRERNVFGEIFFCRLDRAVGGNDACNWLEQGFQLPAGSLVAHNMDGVVAKISQHVRDLLQALKEQGSHPSRRALLVLDGCSQPVVMVGEERFFLSRLLSRLVDVLRTEGVTLTTAVTMRAKGPMAPGRVGVPGEKTVVVKPLDARSTAELFVMCCSRNLSVCEMGPSKPEPFTGTEGKADSYESFAKSDIVLALRGHPGCVQDLCRCPRVHEEKGLIVHREKLLREDIPKARKRKKGCYGIASGEQYAYPDEPVRRPISIDTPPLVPEEVVQET 744          
BLAST of mRNA_Ecto-sp13_S_contig784.19100.1 vs. uniprot
Match: D8LEZ2_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEZ2_ECTSI)

HSP 1 Score: 630 bits (1625), Expect = 1.760e-221
Identity = 308/311 (99.04%), Postives = 310/311 (99.68%), Query Frame = 1
Query:    1 LLPPEGDHDIPVFEEVPDGQFVDATPLKPPYRCDAVTQYFWGRAVDVQKVVKHMVSGVPCVTITGQKGIGKTQVLLKACAYTRERNVFGEIFFCRLDRAVGGNDACNWLEQGFQLPAGSLVAHNMDGVVAKISQHVRDQLQALREQGSHPSRRALLVLDGCSQPVVMVGEERFFLSRLLSRLVDVLRTEGVTLTTAVTMRAKGPMAPGRVGVPGEKTVVVEPLDARSTAELFVMCCSRNLSVCEMGPSKPEPFTGTEGKADSYESFAKSDIVLALRGHPGCVQDLCRCPRVHEEKGLIVHREKLLREDIPK 933
            LLPPEGDHDIPVFEEVPDGQFVDATPLKPPYRCDAVTQYFWGRAVDVQKVVKHMVSGVPCVTITGQKGIGKTQVLLKACAYTRERNVFGEIFFCRLDRAVGGNDACNWLEQGFQLPAGSLVAHNMDGVVAKISQHVRDQLQALREQGSHPSRRALLVLDGCSQPVVMVGEERFFLSRLLSRLVDVLRTEGVTLTTAVTMRAKGPMAPGR+G+ GEKTVVVEPLDARSTAELFVMCCSRNLSVCEMGPSKPEPFTGTEGKADSYESFAKSDIVLALRGHPGCVQDLCRCPRVHEEKGLIVHREKLLREDIPK
Sbjct:  162 LLPPEGDHDIPVFEEVPDGQFVDATPLKPPYRCDAVTQYFWGRAVDVQKVVKHMVSGVPCVTITGQKGIGKTQVLLKACAYTRERNVFGEIFFCRLDRAVGGNDACNWLEQGFQLPAGSLVAHNMDGVVAKISQHVRDQLQALREQGSHPSRRALLVLDGCSQPVVMVGEERFFLSRLLSRLVDVLRTEGVTLTTAVTMRAKGPMAPGRIGIHGEKTVVVEPLDARSTAELFVMCCSRNLSVCEMGPSKPEPFTGTEGKADSYESFAKSDIVLALRGHPGCVQDLCRCPRVHEEKGLIVHREKLLREDIPK 472          
BLAST of mRNA_Ecto-sp13_S_contig784.19100.1 vs. uniprot
Match: A0A8K1C3G6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3G6_PYTOL)

HSP 1 Score: 114 bits (284), Expect = 3.880e-24
Identity = 97/309 (31.39%), Postives = 142/309 (45.95%), Query Frame = 1
Query:   16 GDHDIPVFEEVPDGQFVDATPLKPPYRCDAVTQYFWGRAVDVQKVVKHMVSGVPCVTITGQKGIGKTQVLLKACAYTRERNVFGEIFFCRLDRAVGGNDACNWLEQGFQLPAGSLVAHNMDGVVAKIS--QHVRDQLQALREQGSHPSRRALLVLDGCSQPVVMVGEERFFLSRLLSRLVDVLRTEGVTLTTAVTMRAKGPMAPGRVGVPGEKTVVVEPLDARSTAELFVMCCSRNLSVCEMGPSKPEPFTGTEGKADSYESFAKSDIVLALRGHPGCVQDLCRCPRVHEEKGLIVHREKLLREDIPKL 936
            G+H   +F +VP G FV+ +   P   CDAV + F GR++++ +V K +V G   VT+TG +GIGKT+V L+   Y  ER VF  IFF RL+ +   ++    L Q     A SL      GV   +S  + + + ++ L   G       LL+LDGC +        R  L  LL R+         TL   +T  +K     G +    EK V VE L     A LF +   R L   EMG           G  D   +FA++ I+ +L GHP C+   C   +  E K + + + + L   IP +
Sbjct:  299 GNHHETLFRDVPLGSFVENSLPPPLNECDAVAEVFVGRSLEIHQVYKSLVEGARLVTVTGDRGIGKTEVALQCAQYATERRVFKHIFFLRLELSEPSSEPTTPLIQRL---AKSL------GVPTAVSNEEELANAVRQLCVDGPF-----LLILDGCQRLTRRDTSFRIILHHLLRRVS--------TLAILITSDSKI----GAMDGVSEKIVAVEHLPPADAALLFTLRAPRRLKAHEMG-----------GSTD-LAAFAENPIIKSLMGHPRCI---CAVAQFLETKDMELDKHEFLNYIIPSV 566          
BLAST of mRNA_Ecto-sp13_S_contig784.19100.1 vs. uniprot
Match: A0A6A3NIE2_9STRA (SH2 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NIE2_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.970e-23
Identity = 92/316 (29.11%), Postives = 147/316 (46.52%), Query Frame = 1
Query:   13 EGDHDIPVFEEVPDGQFVDAT------PLKPPYRCDAVTQYFWGRAVDVQKVVKHMVSGVPCVTITGQKGIGKTQVLLKACAYTRERNVFGEIFFCRLD-RAVGGNDACNWLEQGFQLPAGSLVAHNMDGVVAKISQHVRDQLQALREQGSHPSRRA-LLVLDGCSQPVVMVGEERFFLSRLLSRLVDVLRTEGVTLTTAVTMRAKGPMAPGRVGVPGEKTVVVEPLDARSTAELFVMCCSRNLSVCEMGPSKPEPFTGTEGKADSYESFAKSDIVLALRGHPGCVQDLCRCPRVHEEKGLIVHREKLLREDIPKL 936
            +GDH+   F +VP G +V+               CDAV + F GR+++V +V K +V G   V+ITG++GIGKT+V L+   Y  ER VF  +F+ RL  R  GG  + N  +Q   L      +  + G+ A+    + +Q +   E  +H    + LL+LDGC++   +    R  ++ LL R+  +          A+ +   G    G +   GEK + V PL     A LF +   R +   EMG           G  D  E+F +  I+ +LRGHP   + +C   +  E K + + + + L   IP +
Sbjct:  290 DGDHNDAPFRDVPVGDWVETDIGGRRGGKLTVNECDAVAEVFVGRSLEVHQVFKSLVEGARLVSITGERGIGKTEVALQCAQYATERRVFSHVFYLRLSTRDEGGGSSDNACKQHVDLALVGKFSKCL-GLQARSLDELAEQARQRCETETHGDGSSFLLILDGCNRAQRLNSRFRAIVATLLRRVNSL----------ALLLTGDGKF--GAMDGVGEKIIPVGPLPPADAALLFTLRAPRKIKAHEMG-----------GSTD-LEAFGEHPIIKSLRGHP---RTICAVSQFLENKDMELDQHEFLSYIIPSV 577          
BLAST of mRNA_Ecto-sp13_S_contig784.19100.1 vs. uniprot
Match: K3XA55_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XA55_GLOUD)

HSP 1 Score: 110 bits (274), Expect = 8.490e-23
Identity = 90/321 (28.04%), Postives = 146/321 (45.48%), Query Frame = 1
Query:   13 EGDHDIPVFEEVPDGQFVDATPLKPPYRCDAVTQYFWGRAVDVQKVVKHMVSGVPCVTITGQKGIGKTQVLLKACAYTRERNVFGEIFFCRLDRAVGGNDACNWLEQGFQLPAGSL--VAHNMD----------GVVAKI-SQHVRDQLQALREQGSHPSRRALLVLDGCSQPVVMVGEERFFLSRLLSRLVDVLRTEGVTLTTAVTMRAKGPMAPGRVGVPGEKTVVVEPLDARSTAELFVMCCSRNLSVCEMGPSKPEPFTGTEGKADSYESFAKSDIVLALRGHPGCVQDLCRCPRVHEEKGLIVHREKLLREDIPKL 936
            +GDH   +F +VP+G+F++ +   P   CDAV + F GR+++V  V K +V G   V+ITG++GIGKT++ L+   Y  ER++F  IFF RL             E   + P+      AH++D          GV A + +  +  Q++    +G+      LL+LDGC++        R  +S LL R+ D            +++   G    G +   GEK V V+ L     A LF +   R +   EMG           G  D    F +  ++ +L GHP   + +C   +  E K + + + + L   IP +
Sbjct:  278 DGDHSEKLFRDVPEGKFIENSIPPPVNECDAVAEVFVGRSLEVHHVYKSLVEGARLVSITGERGIGKTEIALQCAQYAAERHLFKHIFFLRL-------------ETDDESPSDDYHKCAHDVDILLTRFSKSLGVTATVDADELAKQVRLKCSEGNF-----LLILDGCNRKTRRDPRFRSIISLLLRRVSD------------LSLLLTGDGKVGAMDGVGEKIVTVDRLPPADAALLFTLRAPRKIKTHEMG-----------GNPD-LAVFGEHPVIRSLMGHP---RTICAVSQFLENKDMELDQHEFLNYIIPSV 553          
BLAST of mRNA_Ecto-sp13_S_contig784.19100.1 vs. uniprot
Match: A0A662WH33_9STRA (SH2 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WH33_9STRA)

HSP 1 Score: 108 bits (271), Expect = 2.180e-22
Identity = 93/328 (28.35%), Postives = 146/328 (44.51%), Query Frame = 1
Query:   16 GDHDIPVFEEVPDGQFVDATP------LKPPYRCDAVTQYFWGRAVDVQKVVKHMVSGVPCVTITGQKGIGKTQVLLKACAYTRERNVFGEIFFCRLDRAVGGNDACNWLEQGFQLPAGSLVAHNMD----GVVAKISQHVRDQLQALREQGSHPSRRA-----------LLVLDGCSQPVVMVGEERFFLSRLLSRLVDVLRTEGVTLTTAVTMRAKGPMAPGRVGVPGEKTVVVEPLDARSTAELFVMCCSRNLSVCEMGPSKPEPFTGTEGKADSYESFAKSDIVLALRGHPGCVQDLCRCPRVHEEKGLIVHREKLLREDIPKL 936
            GDH+   F +V  G  V+               CDAV + F GR+++V +V K +V G   V++TG++G+GKT+V L+   Y  ER +F  IF+ RLD  VGG D     E G      +   H+ +     +V K ++ +  Q  +L E      +R            LL+LDGC++P       R  +  LL R+  +          A+ +   G +  G +   GEK + V PL     A LF +   R +   EMG           G  D  E+F +  I+ +LRGHP   + +C   +  E+K + + + + L   IP +
Sbjct:  295 GDHNDAPFRDVSIGSCVETAMGGRRGGKATVNECDAVAEVFVGRSLEVHQVYKALVEGARLVSVTGERGVGKTEVALQCAQYATERRLFSHIFYLRLD--VGGED-----EDGASSIEATACHHHSEPESSALVGKFAKCLGLQAASLEELADRARQRCDSEAEGEGGSFLLILDGCNRPQRHNARFRATVGTLLRRVSSL----------ALLLTGDGKL--GAMDGVGEKIIAVGPLPPADAALLFTLRAPRKIRAHEMG-----------GSTD-LEAFGEHPIIKSLRGHP---RTICAVSQFLEKKDMELDQHEFLNYIIPSV 588          
BLAST of mRNA_Ecto-sp13_S_contig784.19100.1 vs. uniprot
Match: A0A485LBF9_9STRA (Aste57867_18877 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LBF9_9STRA)

HSP 1 Score: 107 bits (267), Expect = 6.790e-22
Identity = 85/292 (29.11%), Postives = 136/292 (46.58%), Query Frame = 1
Query:   16 GDHDIP-VFEEVPDGQFVDATPLKPPYRCDAVTQYFWGRAVDVQKVVKHMVSGVPCVTITGQKGIGKTQVLLKACAYTRERNVFGEIFFCRLDRAVGGNDACNWLEQGFQLPAGSLVAHNMDGVVAKISQHVRDQLQALREQGSHPSRRALLVLDGCS---QPVVMVGEERFFLSRLLSRLVDVLRTEGVTLTTAVTMRAKGPMAPGRVGVPGEKTVVVEPLDARSTAELFVMCCSRNLSVCEMGPSKPEPFTGTEGKADSYESFAKSDIVLALRGHPGCVQDLCRCPRVHE 879
            GDH    +F ++P G++ D TP  P   CDAV + F GR+++V  V   +  G    +ITG  G+GKT++ L++C Y  +R++F  IFF R+          ++L        G   + ++D +  +I    RD+L  L+      S   LLVLDGC+    P  M  +   F   +LS+L+  +R+  + LT+   +     +  G     GE+ + +E L     A LF +   R L V EMG                 ESF++  I+ AL GHP  +  + +    H+
Sbjct:  208 GDHATSHLFSDIPPGRYDDLTPPLPINECDAVAEVFVGRSIEVHAVYTALAEGARMASITGDAGMGKTEIALQSCQYATDRHLFEHIFFLRVRARPPAASLASYLLAQLAKTFGVDASDDVDSLCERI----RDKLDGLKIADKRLS--FLLVLDGCNLLFTPHTMRAQLPQF-QAILSQLLRRVRSLSLLLTSTTRLGGGHGLDCGV----GERVIPIERLPPWDAALLFTVRAPRRLQVHEMG--------------GGLESFSRGKIMDALGGHPKIICAVAQLLESHD 474          
BLAST of mRNA_Ecto-sp13_S_contig784.19100.1 vs. uniprot
Match: A0A2P4WYM4_9STRA (CHAT domain-containing protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WYM4_9STRA)

HSP 1 Score: 105 bits (261), Expect = 3.200e-21
Identity = 92/319 (28.84%), Postives = 145/319 (45.45%), Query Frame = 1
Query:   13 EGDHDIPVFEEVPDGQFVDATP-----LKPPYRCDAVTQYFWGRAVDVQKVVKHMVSGVPCVTITGQKGIGKTQVLLKACAYTRERNVFGEIFFCRLDRAVGGNDACNWLEQGFQLPAGSLVAHNMD--GVVAKISQHVRDQLQALREQGSHPSRRA-LLVLDGCSQPVVMVGEERFFLSRLLSRLVDVLRTEGVTLTTAVTMRAKGPMAPGRVGV---PGEKTVVVEPLDARSTAELFVMCCSRNLSVCEMGPSKPEPFTGTEGKADSYESFAKSDIVLALRGHPGCVQDLCRCPRVHEEKGLIVHREKLLREDIPKL 936
            +GDH+   F +VP G  V+              CDAV + F GR+++V +V K +V G   V+ITG++GIGKT+V L+   Y  ER  F  IF+ RL+    G D    + +  +L   +LV+      G+ A     + +Q +   E   H    + LL+LDGC++      + R  ++ LL R+  +     + LT             G+ GV    GEK + V PL     A LF +   R +   EMG           G  D  E+F +  I+ +L+GHP   + +C   +  E K + + + + L   IP +
Sbjct:  278 DGDHNDAPFRDVPMGDCVETDMGGRRGKVTVNECDAVAEVFVGRSLEVHQVYKSLVEGARLVSITGERGIGKTEVALQCAQYATERRAFSHIFYLRLNTNGEGEDINGDMCKHVELEPSALVSRFAKCLGLQATSLDELAEQARQRCETEHHGDGSSFLLILDGCNRAQRQNPKFRGIVAMLLRRVNSL----ALLLT-----------GDGKFGVLDGVGEKIISVGPLPPSDAALLFTLRAPRKIKAHEMG-----------GSTD-LEAFGEHPIIKSLQGHP---RTICAVSQFLENKDMELDQREFLSYIIPSV 566          
BLAST of mRNA_Ecto-sp13_S_contig784.19100.1 vs. uniprot
Match: G4ZYP8_PHYSP (SH2 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZYP8_PHYSP)

HSP 1 Score: 104 bits (260), Expect = 5.850e-21
Identity = 96/324 (29.63%), Postives = 143/324 (44.14%), Query Frame = 1
Query:   13 EGDHDIPVFEEVPDGQFVDAT------PLKPPYRCDAVTQYFWGRAVDVQKVVKHMVSGVPCVTITGQKGIGKTQVLLKACAYTRERNVFGEIFFCRL---DRAVGGND-ACNWLEQGFQLPAGSLV---AHNMDGVVAKISQHVRDQLQALREQGSHPSRRALLVLDGCSQPVVMVGEERFFLSRLLSRLVDVLRTEGVTLTTAVTMRAKGPMAPGRVGVP---GEKTVVVEPLDARSTAELFVMCCSRNLSVCEMGPSKPEPFTGTEGKADSYESFAKSDIVLALRGHPGCVQDLCRCPRVHEEKGLIVHREKLLREDIPKL 936
            +GDH+   F +VP G  V+               CDAV + F GR+++V +V K +V G   V+ITG++GIGKT+V L+   Y  ER VF  IF+ RL   D   G +D AC   +Q   L    LV   A  +    A + +      Q    +        LL+LDGC++   +    R  ++ LL R+  +     + LT             G+ GV    GEK + V PL     A LF +   R +   EMG           G  D  E+F +  I+ +LRGHP   + +C   +  E K + + + + L   IP +
Sbjct:  284 DGDHNDAPFRDVPVGDCVETDIGGRRGGKVTVNECDAVAEVFVGRSLEVHQVFKSLVEGARLVSITGERGIGKTEVALQCAQYATERRVFSHIFYLRLSTDDEGEGPSDKAC---KQHADLEPAVLVGKFAKCLGLQAASLDELAEQARQCCETETQGDGSSFLLILDGCNRAHRLNSRFRAIVAMLLRRVNSL----ALLLT-----------GDGKFGVMDGVGEKIIPVGPLPPADAALLFTLRAPRKIKAHEMG-----------GSTD-LEAFGEHPIIKSLRGHP---RTICGVSQFLENKDMELDQHEFLSYIIPSV 574          
BLAST of mRNA_Ecto-sp13_S_contig784.19100.1 vs. uniprot
Match: A0A225WTC8_9STRA (SH2 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WTC8_9STRA)

HSP 1 Score: 103 bits (258), Expect = 9.400e-21
Identity = 91/326 (27.91%), Postives = 142/326 (43.56%), Query Frame = 1
Query:   13 EGDHDIPVFEEVPDGQFVDATP-----LKPPYRCDAVTQYFWGRAVDVQKVVKHMVSGVPCVTITGQKGIGKTQVLLKACAYTRERNVFGEIFFCRLDRAVGGNDACNWLEQGFQLPAGSLVAHNMDG--VVAKISQHVRDQLQALREQGSHPSRRA-----------LLVLDGCSQPVVMVGEERFFLSRLLSRLVDVLRTEGVTLTTAVTMRAKGPMAPGRVGVPGEKTVVVEPLDARSTAELFVMCCSRNLSVCEMGPSKPEPFTGTEGKADSYESFAKSDIVLALRGHPGCVQDLCRCPRVHEEKGLIVHREKLLREDIPKL 936
            EGDH    F +VP G  V+              CDAV + F GR+++V +V K +V G   V++TG  GIGKT+V L+   Y  ER VF  IF+ RL+ + G  D            +G +  H+++   +VA+ ++ +  Q   L E      +R            LL+LDGC++        R  ++ LL R+  +          A+ +   G    G +   GEK + V PL     A LF +   R +   EMG S               E+F +  I+ +LRGHP   + +C   +  E K + + + + L   IP +
Sbjct:   46 EGDHHDAPFRDVPVGDCVETDMGGRRGKVTVNECDAVAEVFVGRSLEVHQVFKSLVEGARLVSVTGDHGIGKTEVALQCAQYATERRVFSHIFYLRLNTS-GEEDI-----------SGDVCKHDLESATLVARFAKCLSLQATTLDELAEQARQRCTTENQGDGSSFLLILDGCNRAQRQNPRFRAIVAMLLRRVNSL----------ALLLTGDGKF--GAMDGVGEKIIAVGPLPPGDAALLFTLRAPRKIKAHEMGSST------------DLEAFGEHPIIKSLRGHP---RTICAVSQFLENKDMELDQREFLSYIIPSV 332          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig784.19100.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A6H5KXM6_9PHAE3.180e-23293.80SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LEZ2_ECTSI1.760e-22199.04SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
A0A8K1C3G6_PYTOL3.880e-2431.39Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A3NIE2_9STRA1.970e-2329.11SH2 domain-containing protein n=4 Tax=Phytophthora... [more]
K3XA55_GLOUD8.490e-2328.04Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A662WH33_9STRA2.180e-2228.35SH2 domain-containing protein n=2 Tax=Nothophytoph... [more]
A0A485LBF9_9STRA6.790e-2229.11Aste57867_18877 protein n=1 Tax=Aphanomyces stella... [more]
A0A2P4WYM4_9STRA3.200e-2128.84CHAT domain-containing protein (Fragment) n=1 Tax=... [more]
G4ZYP8_PHYSP5.850e-2129.63SH2 domain-containing protein n=1 Tax=Phytophthora... [more]
A0A225WTC8_9STRA9.400e-2127.91SH2 domain-containing protein n=1 Tax=Phytophthora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig784contigEcto-sp13_S_contig784:18473..21536 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score632.1
Seed ortholog evalue1.5e-178
Seed eggNOG ortholog2880.D8LEZ2
Model size1029
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.Src homology 2 domains
EggNOG OGs2CNGK@1,2QW5N@2759
Ec32 ortholog descriptionSH2 domain containing protein
Ec32 orthologEc-21_006100.1
Cds size1029
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464054.7932656-CDS-Ecto-sp13_S_contig784:18472..185681681464054.7932656-CDS-Ecto-sp13_S_contig784:18472..18568Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig784 18473..18568 -
1681464054.8060427-CDS-Ecto-sp13_S_contig784:18938..191911681464054.8060427-CDS-Ecto-sp13_S_contig784:18938..19191Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig784 18939..19191 -
1681464054.8159685-CDS-Ecto-sp13_S_contig784:19599..199491681464054.8159685-CDS-Ecto-sp13_S_contig784:19599..19949Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig784 19600..19949 -
1681464054.824862-CDS-Ecto-sp13_S_contig784:20530..207131681464054.824862-CDS-Ecto-sp13_S_contig784:20530..20713Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig784 20531..20713 -
1681464054.8352916-CDS-Ecto-sp13_S_contig784:21389..215361681464054.8352916-CDS-Ecto-sp13_S_contig784:21389..21536Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig784 21390..21536 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig784.19100.1prot_Ecto-sp13_S_contig784.19100.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig784 18473..21536 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig784.19100.1

>prot_Ecto-sp13_S_contig784.19100.1 ID=prot_Ecto-sp13_S_contig784.19100.1|Name=mRNA_Ecto-sp13_S_contig784.19100.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=343bp
LLPPEGDHDIPVFEEVPDGQFVDATPLKPPYRCDAVTQYFWGRAVDVQKV
VKHMVSGVPCVTITGQKGIGKTQVLLKACAYTRERNVFGEIFFCRLDRAV
GGNDACNWLEQGFQLPAGSLVAHNMDGVVAKISQHVRDQLQALREQGSHP
SRRALLVLDGCSQPVVMVGEERFFLSRLLSRLVDVLRTEGVTLTTAVTMR
AKGPMAPGRVGVPGEKTVVVEPLDARSTAELFVMCCSRNLSVCEMGPSKP
EPFTGTEGKADSYESFAKSDIVLALRGHPGCVQDLCRCPRVHEEKGLIVH
REKLLREDIPKLQEQYAYPDEPISRTISIDTPPLVPKEVVQET
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mRNA from alignment at Ecto-sp13_S_contig784:18473..21536-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig784.19100.1 ID=mRNA_Ecto-sp13_S_contig784.19100.1|Name=mRNA_Ecto-sp13_S_contig784.19100.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3064bp|location=Sequence derived from alignment at Ecto-sp13_S_contig784:18473..21536- (Ectocarpus species13 EcNAP12_S_4_19m)
CTCCTCCCCCCGGAGGGTGATCACGACATTCCTGTGTTCGAAGAGGTCCC TGACGGGCAGTTCGTCGATGCCACGCCGCTCAAGCCACCGTACCGCTGCG ACGCCGTCACCCAGTACTTCTGGGGCCGAGCAGTGGATGTCCAGAAGGTG TGGTGTGCGGTATCACGTGTGTGTGTCTCGACACCTCGCGTGTTGTTTTT GTGTTTCTTCTTTGTGCTGTCATCCACGATTGTGGTATTACAGTTGGTTG GGAGACATGCGTGTGGTAAAATGTTGGCAGCTGTCGTTTGCGGTGGTGGT TGTGTTTCTTGTTTTTGGATTCCATGTATGGATAAAACAGCAGTGATGAT GAACATATCATACGGTATAGCTGTATTGTGTCTTTTTGACGTCGATTTTT CATGTTTCGCACTTCCCCTCGATCGTTCGATACATGCAGACGTGAGTACC GTTTTTCGGGTTCGGGTTGGCTTTGGGCGATCATTCTTTTTTAGCTGTGG CCTGAAAAGAAAGCCGGTTGCTTCTTATTTTCGCCGCATAAAGCTGGCGC TGGGTCCAGAACCCGCAAAGTTCACACTTGTTGGAAACAGAAGACAGACC TCTGCAGCTCTCGTGGTCATGGACTCGTGTTGCTTCACTTAAGCAACTGA ACAAGCACGTACACCCAAACCAACGAAACAGCAGTGGCACGTTTCCGAGG AACTGGCGCTCGTTCTATGTCACCACTTGCTAGTGGCCTGCCTGGATGGA CGTTTAAAATAATCGTGGTATTTAAGCATGGTTTCCCGTGGGGTTTGTCC GCAAATGCACCCCAATCTTGCAGGTGGTGAAGCACATGGTAAGCGGGGTC CCATGCGTGACGATCACCGGCCAAAAGGGCATCGGGAAGACGCAGGTGCT GCTGAAGGCGTGCGCGTACACACGGGAGCGGAACGTGTTCGGGGAGATAT TTTTCTGCCGTTTGGACAGGGCGGTCGGCGGCAACGATGCCTGCAACTGG CTCGAGGTCAGTGGTATAGCCTTTGCAAGGTTCTTCTACTAGGTAGACGG GTTGATGTGATAAAGCATGCAGTCGGGGAAGGAGGGTTAAGGATAGGGTC TTCATACCCCCCTGTTCTTTTTTCCTCAATCTTATCTCTCGCGAAGGTGG TAAGTTCGAGGTGGGTACTTACGCAGCAAGTCGATTCAAGTGAAGGCAGC CTCAATCACGACGAGGGAAGGAATTTTTCGTTCTGTTGTGTAAGCGTGCG TTGGGACTCTGACAACGCATGATCAAGGTCTATTCGGTCCGGACGAGACG ATCGCCTGCGGCGACCTTTGAAATGGTTTGACTGTCCGGCTCCGCGGCGA ATTAGCACCAACCTTGTGAATTCCGACGACAGACCTGTAACGCTGTGCCA ATTAGAAGCGGAGTTTGCACCAGCATCGGGTGATGAGGTGAAGCAAACTG CCGGCGCGTACTGCCGGAGCGTTACCACTATTATACTCCGTGTTGCGTAG TACATATATTGCACTCCCTCGGCACTGACAAGACAACATGCCCCACGCAC GCACGACAACCCCTTCTTCTCTTGACAACCCCCACAGCAAGGATTCCAGC TCCCGGCCGGCTCCCTCGTGGCGCACAACATGGACGGGGTCGTGGCCAAG ATCTCCCAGCACGTCAGGGACCAGCTGCAAGCGCTCAGGGAGCAGGGCTC CCACCCTTCCCGGCGCGCTCTCCTCGTTCTCGACGGGTGCAGCCAGCCCG TGGTTATGGTCGGCGAGGAACGCTTCTTCCTGAGCCGCCTGCTCTCGCGG CTAGTAGACGTGCTGAGGACGGAGGGGGTGACCCTCACAACCGCAGTGAC AATGCGGGCTAAGGGCCCCATGGCGCCCGGCCGCGTCGGAGTCCCCGGAG AGAAGACGGTCGTGGTAGAGCCGCTGGACGCTAGGAGGTGCGTTTTGAGA CACCTTTTTTGCTTTCTTTCGTAGCCCGCGGGGTTGTTGTGTCTTGTGGG TCGTTGCTTGCTTGCTTCCGTGTGGGGTGTCGGGGAGAGAGGTGTTTCGA GGTGTGTGCTCAGAAGGGCAAAAGCCGTGGTTGTCGTGTGTTCCAGTGTT GGGGGGGGTGTAACCACGTTTGGTGCGGATGGCGGTGTTTCCCTGAGTCG TATAGGGTCGAATAGTTGTCTCGTGTCATCTCTCGCTCCTTCTCTCCTGT CCAACAACGTCCACGTGTTCCTCACCTTCCCTCCTGCTCGCGGTCCTCCT ACTTTCTCTCTCTCTCGGTCGATCGATCCATTACCCCTCCCCGCATCGTG ACGGCTCTACCCCCCCCCCCCCGTCACCTTCCTTCCGTACCGCAGCACGG CAGAGCTGTTCGTGATGTGCTGCTCGCGTAACCTCTCGGTCTGTGAGATG GGCCCCAGCAAACCCGAGCCCTTTACGGGGACGGAAGGGAAGGCAGACTC GTACGAAAGCTTCGCCAAGAGTGACATCGTGCTCGCGCTGCGCGGACACC CGGGGTGCGTGCAGGACCTGTGCCGCTGCCCCCGCGTGCACGAGGAGAAA GGGCTCATCGTCCACAGAGAGAAGCTCCTCAGAGAGGACATACCAAAGGT GAAGAAGAGGAAGAAGGGTTGTCGTTGTATTGCGAGCGGGGTGTTTTTTC GGCGATGACCCCAACCCACCGTCCGCATTGTTGTCTTGCTTGGCGAGCAA CCACGGGGAAGAATTAGACGGCGAAGAGAGGCTTGAGGATTGCAGTCGGT GTGATCAAACAAATCTGTCTGTTTCTAGTCCGACGGTTGCGTGCGTCCAG GTCTGTCCTATGCATGAGAGGACGAGAAAAATTTGTTCACCTACCTGCCT AACGGCTGACGGTAATCTGACACACGGCGTTTAAAGGTGGCCGATTCATG ACAACGTGTCTTGCCATCTCGGCGTATGTACGTCTCTCGCTCCGCTCTGG TTTCTGTTTCTGGAGCAGCTACAGGAGCAGTACGCCTACCCGGACGAACC AATTAGCCGTACAATCAGCATCGACACGCCTCCTCTCGTCCCCAAAGAGG TCGTGCAAGAGACC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig784:18473..21536-

>mRNA_Ecto-sp13_S_contig784.19100.1 ID=mRNA_Ecto-sp13_S_contig784.19100.1|Name=mRNA_Ecto-sp13_S_contig784.19100.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1029bp|location=Sequence derived from alignment at Ecto-sp13_S_contig784:18473..21536- (Ectocarpus species13 EcNAP12_S_4_19m)
CTCCTCCCCCCGGAGGGTGATCACGACATTCCTGTGTTCGAAGAGGTCCC
TGACGGGCAGTTCGTCGATGCCACGCCGCTCAAGCCACCGTACCGCTGCG
ACGCCGTCACCCAGTACTTCTGGGGCCGAGCAGTGGATGTCCAGAAGGTG
GTGAAGCACATGGTAAGCGGGGTCCCATGCGTGACGATCACCGGCCAAAA
GGGCATCGGGAAGACGCAGGTGCTGCTGAAGGCGTGCGCGTACACACGGG
AGCGGAACGTGTTCGGGGAGATATTTTTCTGCCGTTTGGACAGGGCGGTC
GGCGGCAACGATGCCTGCAACTGGCTCGAGCAAGGATTCCAGCTCCCGGC
CGGCTCCCTCGTGGCGCACAACATGGACGGGGTCGTGGCCAAGATCTCCC
AGCACGTCAGGGACCAGCTGCAAGCGCTCAGGGAGCAGGGCTCCCACCCT
TCCCGGCGCGCTCTCCTCGTTCTCGACGGGTGCAGCCAGCCCGTGGTTAT
GGTCGGCGAGGAACGCTTCTTCCTGAGCCGCCTGCTCTCGCGGCTAGTAG
ACGTGCTGAGGACGGAGGGGGTGACCCTCACAACCGCAGTGACAATGCGG
GCTAAGGGCCCCATGGCGCCCGGCCGCGTCGGAGTCCCCGGAGAGAAGAC
GGTCGTGGTAGAGCCGCTGGACGCTAGGAGCACGGCAGAGCTGTTCGTGA
TGTGCTGCTCGCGTAACCTCTCGGTCTGTGAGATGGGCCCCAGCAAACCC
GAGCCCTTTACGGGGACGGAAGGGAAGGCAGACTCGTACGAAAGCTTCGC
CAAGAGTGACATCGTGCTCGCGCTGCGCGGACACCCGGGGTGCGTGCAGG
ACCTGTGCCGCTGCCCCCGCGTGCACGAGGAGAAAGGGCTCATCGTCCAC
AGAGAGAAGCTCCTCAGAGAGGACATACCAAAGCTACAGGAGCAGTACGC
CTACCCGGACGAACCAATTAGCCGTACAATCAGCATCGACACGCCTCCTC
TCGTCCCCAAAGAGGTCGTGCAAGAGACC
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