mRNA_Ecto-sp13_S_contig7784.19031.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7784.19031.1
Unique NamemRNA_Ecto-sp13_S_contig7784.19031.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7784.19031.1 vs. uniprot
Match: D7FHY6_ECTSI (Phosphatidylinositol 3-kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY6_ECTSI)

HSP 1 Score: 434 bits (1116), Expect = 3.300e-138
Identity = 216/222 (97.30%), Postives = 218/222 (98.20%), Query Frame = 2
Query:    2 LKPYGILATGPRHGLVEFVSGSQPVSAVLSAHNGSILEYLRHHNPDPSAPNGVRPAAVQTFVKSTAGYCVITYLLGIGDRHLDNIMMLPTGNLFHIDFGYIFGREAKPGATPIRFTQQMADAMGGVNSEDYRMFKTYCCQAYNWLRKSANLILNLLSLMSDAGISDLSDDPVAALAKVEDNFRLDLTDEMAENLFLRLIDTSLQALAPRVIELLHQIRVAGR 667
            LKPYGILATGPRHGLVEFVSGSQPVSAVLSAHNGSILEYLRHHNPDPSAP GVR A VQ FVK+TAGYCVITYLLGIGDRHLDNIMMLPTGNLFHIDFGYIFGR+AKPGATPIRFTQQMADAMGGVNSEDYRMFKTYCCQAYNWLRKSANLILNLLSLMSDAGISDLSDDPVAALAKVEDNFRLDLTDEMAENLFLRLIDTSLQALAPRVIELLHQIRVAGR
Sbjct:  818 LKPYGILATGPRHGLVEFVSGSQPVSAVLSAHNGSILEYLRHHNPDPSAPKGVRAAGVQNFVKNTAGYCVITYLLGIGDRHLDNIMMLPTGNLFHIDFGYIFGRDAKPGATPIRFTQQMADAMGGVNSEDYRMFKTYCCQAYNWLRKSANLILNLLSLMSDAGISDLSDDPVAALAKVEDNFRLDLTDEMAENLFLRLIDTSLQALAPRVIELLHQIRVAGR 1039          
BLAST of mRNA_Ecto-sp13_S_contig7784.19031.1 vs. uniprot
Match: A0A6H5K341_9PHAE (Phosphatidylinositol 3-kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K341_9PHAE)

HSP 1 Score: 351 bits (900), Expect = 7.770e-108
Identity = 202/306 (66.01%), Postives = 206/306 (67.32%), Query Frame = 2
Query:    2 LKPYGILATGPRHGLVEFVSGSQPVSAVLSAHNGSILE--------------------------------------YLRHHNPDPSAPNGVRPAAVQTFVKSTAGYCVITYL-----------------------------------LGIGDRHLDNIMM-----------LPTGNLFHIDFGYIFGREAKPGATPIRFTQQMADAMGGVNSEDYRMFKTYCCQAYNWLRKSANLILNLLSLMSDAGISDLSDDPVAALAKVEDNFRLDLTDEMAENLFLRLIDTSLQALAPRVIELLHQIRVAGR 667
            LKPYGILATGPRHGLVEFVSGSQPVSAVLSAHNGSILE                                      YLRHHNPDPSAPNGVRPAAVQTFVKSTAGYCVITYL                                    G+ +  L    +           L  GNLFHIDFGYIFGR+AKPGATPIRFTQQMADAMGGVNSEDYRMFKTYCCQAYNWLRKSANLILNLLSLMSDAGISDLSDDPVAALAKVEDNFRLDLTDEM   L   LIDTSLQALAPRVIELLHQIRVAGR
Sbjct:  587 LKPYGILATGPRHGLVEFVSGSQPVSAVLSAHNGSILEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLRHHNPDPSAPNGVRPAAVQTFVKSTAGYCVITYLGYLAEPSFRGPASTAPSTRMLQPLTITIFVTQPPGSGLLELALKKFSLNQRLRPPLKERLAIGNLFHIDFGYIFGRDAKPGATPIRFTQQMADAMGGVNSEDYRMFKTYCCQAYNWLRKSANLILNLLSLMSDAGISDLSDDPVAALAKVEDNFRLDLTDEMVGKL---LIDTSLQALAPRVIELLHQIRVAGR 889          
BLAST of mRNA_Ecto-sp13_S_contig7784.19031.1 vs. uniprot
Match: A0A7R9UE18_9STRA (Phosphatidylinositol 3-kinase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE18_9STRA)

HSP 1 Score: 303 bits (775), Expect = 7.580e-90
Identity = 146/222 (65.77%), Postives = 176/222 (79.28%), Query Frame = 2
Query:    2 LKPYGILATGPRHGLVEFVSGSQPVSAVLSAHNGSILEYLRHHNPDPSAPNGVRPAAVQTFVKSTAGYCVITYLLGIGDRHLDNIMMLPTGNLFHIDFGYIFGREAKPGATPIRFTQQMADAMGGVNSEDYRMFKTYCCQAYNWLRKSANLILNLLSLMSDAGISDLSDDPVAALAKVEDNFRLDLTDEMAENLFLRLIDTSLQALAPRVIELLHQIRVAGR 667
            L+PY  LATG   G++EFV+ S PVS VL+  NGSIL YL+HHNPDP  P GV P  + TFVKS AGYCVITY+LG+GDRHLDNIM+   GNLFH+DFG+IFGR+ KP   P RFT++MA+AMGG  SE Y  FKTY CQAYNWLRKSANLILN+LSLM+DAGI DL +DP A LAKV++ FRLDLTDE AE+  L+L++ SL +LAP+V+E+ H+I VA R
Sbjct:  639 LRPYVTLATGADDGIIEFVTNSTPVSGVLAKFNGSILAYLKHHNPDPEGPYGVTPECMSTFVKSCAGYCVITYILGVGDRHLDNIMLQTAGNLFHLDFGFIFGRDPKPLPPPFRFTREMAEAMGGEQSEHYARFKTYMCQAYNWLRKSANLILNMLSLMADAGIEDLRNDPDATLAKVQERFRLDLTDEQAEHFMLQLLNESLTSLAPQVMEIFHKISVARR 860          
BLAST of mRNA_Ecto-sp13_S_contig7784.19031.1 vs. uniprot
Match: A0A7S0FRS7_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FRS7_9STRA)

HSP 1 Score: 262 bits (670), Expect = 1.940e-81
Identity = 134/226 (59.29%), Postives = 167/226 (73.89%), Query Frame = 2
Query:    2 LKPYGILATGPRHGLVEFVSGSQPVSAVLSAHNGSILEYLRHHNPDPSAPNGVRPAAVQTFVKSTAGYCVITYLLGIGDRHLDNIMMLPTGNLFHIDFGYIFGREAKPGATPIRFTQQMADAMGGVNSEDYRMFKTYCCQAYNWLRKSANLILNLLSLMSDAGISDLSDDPVA----ALAKVEDNFRLDLTDEMAENLFLRLIDTSLQALAPRVIELLHQIRVAGR 667
            LKPY ILAT    GLVEFV GS P+S VL+ +N SIL++L+   P   A  G+    +QT+++S AGYCVITYLLG+GDRHLDNIM+LP+G+ FHIDFG+IFGR+ KP     R T++M D MGGV+S DY  F++  CQA+N LRKSA L+LNLL LM +AGI DLS++P A     +AKVE+ FRL+LTDE AE  FL LID SL ALAPRV+E+ HQ+ VA R
Sbjct:    9 LKPYAILATSASTGLVEFVDGSIPISQVLANNNNSILQFLKKSAPRQGAKYGIDSDVMQTYLRSCAGYCVITYLLGVGDRHLDNIMLLPSGHFFHIDFGFIFGRDPKPLPPAFRLTREMVDGMGGVDSADYARFRSLSCQAFNTLRKSAGLVLNLLHLMGEAGIEDLSNNPAADAEGVIAKVEERFRLELTDEQAEAYFLGLIDDSLNALAPRVMEVFHQLSVARR 234          
BLAST of mRNA_Ecto-sp13_S_contig7784.19031.1 vs. uniprot
Match: A0A812YR71_SYMMI (PikE protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YR71_SYMMI)

HSP 1 Score: 256 bits (655), Expect = 1.580e-79
Identity = 126/189 (66.67%), Postives = 146/189 (77.25%), Query Frame = 2
Query:    2 LKPYGILATGPRHGLVEFVSGSQPVSAVLSAHNGSILEYLRHHNPDPSAPNGVRPAAVQTFVKSTAGYCVITYLLGIGDRHLDNIMMLPTGNLFHIDFGYIFGREAKPGATPIRFTQQMADAMGGVNSEDYRMFKTYCCQAYNWLRKSANLILNLLSLMSDAGISDLS--DDPVAALAKVEDNFRLDLT 562
            L  YGILATGP  G++EFV GS P+SAVLS++  SIL YL+HHNPD   P G++  A+  FV+S A  CV+TY+LGIGDRHLDN+M+   G LFHIDFG+IFGR+ KP   P RFT+QMADAMGG +SE Y+ FK YCCQAYNWLRKSANLILNLLSLM DAGI DLS   +P A L KVE  FRLDLT
Sbjct:   20 LLTYGILATGPTDGVMEFVRGSMPISAVLSSYGNSILTYLKHHNPDSKGPLGMKAEAMDMFVRSCASSCVVTYILGIGDRHLDNVMIRTNGQLFHIDFGFIFGRDPKPLPPPFRFTRQMADAMGGEDSEHYKRFKAYCCQAYNWLRKSANLILNLLSLMVDAGIPDLSVHQEPQAVLKKVEQKFRLDLT 208          
BLAST of mRNA_Ecto-sp13_S_contig7784.19031.1 vs. uniprot
Match: A0A836CGT8_9STRA (Phosphatidylinositol 3-kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGT8_9STRA)

HSP 1 Score: 269 bits (688), Expect = 2.820e-79
Identity = 139/222 (62.61%), Postives = 165/222 (74.32%), Query Frame = 2
Query:    2 LKPYGILATGPRHGLVEFVSGSQPVSAVLSAHNGSILEYLRHHNPDPSAPNGVRPAAVQTFVKSTAGYCVITYLLGIGDRHLDNIMMLPTGNLFHIDFGYIFGREAKPGATPIRFTQQMADAMGGVNSEDYRMFKTYCCQAYNWLRKSANLILNLLSLMSDAGISDLSDDPVAALAKVEDNFRLDLTDEMAENLFLRLIDTSLQALAPRVIELLHQIRVAGR 667
            L+PY ILATGP+ GLVEFV+GS P+S VL+    SIL+YLRHHNPD + P GV   AV TFVKS AGYCVITY+LGIGDRHLDN+M+LP GNLFHIDFGYIFGR+ KP A P R T++MAD      +            AY WLRKSA+LILNLL+LM DAGI  LS DPVA L +V + FRLDL+DE A++ FL LID SL A APRV+E++H+I V+ R
Sbjct:  409 LRPYRILATGPKDGLVEFVAGSLPISQVLATFGNSILDYLRHHNPDAAGPMGVARDAVLTFVKSCAGYCVITYILGIGDRHLDNLMLLPEGNLFHIDFGYIFGRDPKPMAPPFRLTREMADG-----TRCXXXXXXXXXXAYTWLRKSAHLILNLLNLMVDAGIESLSTDPVAVLGRVAERFRLDLSDEQADHFFLSLIDESLFAFAPRVMEVMHKIGVSRR 625          
BLAST of mRNA_Ecto-sp13_S_contig7784.19031.1 vs. uniprot
Match: A0A7S3XVP8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVP8_HETAK)

HSP 1 Score: 258 bits (660), Expect = 2.840e-79
Identity = 131/220 (59.55%), Postives = 156/220 (70.91%), Query Frame = 2
Query:    2 LKPYGILATGPRHGLVEFVSGSQPVSAVLSAHNGSILEYLRHHNPDPSAPNGVRPAAVQTFVKSTAGYCVITYLLGIGDRHLDNIMMLPTGNLFHIDFGYIFGREAKPGATPIRFTQQMADAMGGVNSEDYRMFKTYCCQAYNWLRKSANLILNLLSLMSDAGISDLSDDPVAALAKVEDNFRLDLTDEMAENLFLRLIDTSLQALAPRVIELLHQIRVA 661
            L PY ILATG + G++EFV GS PVSA+   + GSILE+LR   PD   P GV    + TFVKSTAGYCV+TYLLGIGDRHLDN+MMLP G LFHIDFG+I GR+ KP   P R T +MA AMGG     YR F++YCCQAYN LR  A L+L+LL LM+DAGI  L +DP   LAK E+ FRL+L+D  AE  FL L+  SL A+A R+ E LHQ+ VA
Sbjct:   60 LTPYRILATGAKDGMMEFVEGSLPVSAINKKYPGSILEFLRASAPDAGGPMGVAAEVMDTFVKSTAGYCVVTYLLGIGDRHLDNLMMLPDGRLFHIDFGWILGRDPKPLPPPFRLTAEMAAAMGGAAGAPYRAFQSYCCQAYNCLRARAPLLLSLLGLMADAGIEALQEDPQGVLAKTEEKFRLELSDAQAERFFLGLVRESLTAVAARINEYLHQVAVA 279          
BLAST of mRNA_Ecto-sp13_S_contig7784.19031.1 vs. uniprot
Match: A0A7S3HBK6_9STRA (Phosphatidylinositol 3-kinase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBK6_9STRA)

HSP 1 Score: 271 bits (692), Expect = 3.400e-77
Identity = 135/224 (60.27%), Postives = 164/224 (73.21%), Query Frame = 2
Query:    2 LKPYGILATGPRHGLVEFVSGSQPVSAVLSAHNGSILEYLRHHNPDPSAPNGVRPAAVQTFVKSTAGYCVITYLLGIGDRHLDNIMMLPTGNLFHIDFGYIFGREAKPGATPIRFTQQMADAMGGVNSEDYRMFKTYCCQAYNWLRKSANLILNLLSLMSDAGISDLS--DDPVAALAKVEDNFRLDLTDEMAENLFLRLIDTSLQALAPRVIELLHQIRVAGR 667
            L  YGILA   + G++EF   S P+SAVL   N SI +YLRHHN +  AP  + P A+ TF+KS AGYCVITY+LGIGDRHLDNIM+  +G +FHIDFG+IFG++ KP   P RF + MADAMGG   E+Y  FKT+CCQ+YNWLRKSANLILNLLSLM DAGI D+S   D    L KVE+ FRLDLTDE AE  FL LI+ +L +LAPR++E+ H+  VA R
Sbjct:  749 LLTYGILAVSQKDGIMEFCRNSMPISAVLKNFNNSISDYLRHHNHEKGAPGEIAPVALDTFIKSCAGYCVITYILGIGDRHLDNIMINTSGQMFHIDFGFIFGQDPKPMPPPFRFIRAMADAMGGEEGENYARFKTFCCQSYNWLRKSANLILNLLSLMGDAGIQDISKRSDLPKVLMKVEEKFRLDLTDEQAEQYFLGLINEALYSLAPRLMEVAHKFAVAMR 972          
BLAST of mRNA_Ecto-sp13_S_contig7784.19031.1 vs. uniprot
Match: A0A6H5KKU1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKU1_9PHAE)

HSP 1 Score: 273 bits (698), Expect = 1.150e-76
Identity = 132/222 (59.46%), Postives = 166/222 (74.77%), Query Frame = 2
Query:    2 LKPYGILATGPRHGLVEFVSGSQPVSAVLSAHNGSILEYLRHHNPDPSAPNGVRPAAVQTFVKSTAGYCVITYLLGIGDRHLDNIMMLPTGNLFHIDFGYIFGREAKPGATPIRFTQQMADAMGGVNSEDYRMFKTYCCQAYNWLRKSANLILNLLSLMSDAGISDLSDDPVAALAKVEDNFRLDLTDEMAENLFLRLIDTSLQALAPRVIELLHQIRVAGR 667
            LK Y +LAT    G++EFV GS P+SAVL+ HN S+L++LRHHN DP  P G++  A+  F +S AG CV+TYLLG+GDRHLDN+M+LP G LFHIDFGY+FG++ K    P R T++M +AMGG  +  Y +FK+ CCQAY  LRKSA+  LNLLSLMS AGI DLSDDP A L  V+D F+LDLTDE A+  FL L+  S+ ALAPRV+E++HQIRVA R
Sbjct: 1240 LKSYRVLATSLTTGMIEFVPGSVPMSAVLATHNNSVLDFLRHHNADPGGPLGMKREALDNFTRSCAGSCVVTYLLGVGDRHLDNLMLLPEGVLFHIDFGYLFGKDPKLMPPPFRLTKEMVEAMGGTEAPHYTVFKSLCCQAYRHLRKSAHQYLNLLSLMSGAGIKDLSDDPAAVLQLVQDRFKLDLTDEQADAHFLSLVSQSMTALAPRVLEVMHQIRVAAR 1461          
BLAST of mRNA_Ecto-sp13_S_contig7784.19031.1 vs. uniprot
Match: A0A1E7F450_9STRA (Kinase-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F450_9STRA)

HSP 1 Score: 252 bits (644), Expect = 4.380e-76
Identity = 127/226 (56.19%), Postives = 159/226 (70.35%), Query Frame = 2
Query:    2 LKPYGILATGPRHGLVEFVSGSQPVSAVLSAHNGSILEYLRHHNPDPSAPNGVRPAAVQTFVKSTAGYCVITYLLGIGDRHLDNIMMLPTGNLFHIDFGYIFGREAKPGATPIRFTQQMADAMGGVNSEDYRMFKTYCCQAYNWLRKSANLILNLLSLMSDAGISDLSDDPVA----ALAKVEDNFRLDLTDEMAENLFLRLIDTSLQALAPRVIELLHQIRVAGR 667
            + PY I+AT P  G+VEFV  S P+SAVL+ HN SIL++ + + P   A   VRP  +  FV+S AG CV+TYL+G+GDRHLDN+M+  TG  FHIDFG++FGR+ KP     R TQQM D MGG  S +YR F +  CQA+N LRKSA L+LNLL LMSDAGI DLS++P A     +AKVE+ FRLDLTDE AE  FL LI+ SL A APR ++++H I VA R
Sbjct:  115 ITPYSIIATSPSSGIVEFVEQSMPLSAVLANHNNSILQFFQSYAPQKGAKYDVRPDVISNFVRSVAGGCVLTYLMGVGDRHLDNLMITKTGRFFHIDFGFMFGRDPKPLPPAFRLTQQMVDGMGGSESAEYRQFCSLACQAFNALRKSAGLVLNLLHLMSDAGIEDLSNNPSADADGVIAKVEERFRLDLTDEQAERFFLTLINDSLSAYAPRFMDIMHSIAVARR 340          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7784.19031.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHY6_ECTSI3.300e-13897.30Phosphatidylinositol 3-kinase n=1 Tax=Ectocarpus s... [more]
A0A6H5K341_9PHAE7.770e-10866.01Phosphatidylinositol 3-kinase n=1 Tax=Ectocarpus s... [more]
A0A7R9UE18_9STRA7.580e-9065.77Phosphatidylinositol 3-kinase n=1 Tax=Pinguiococcu... [more]
A0A7S0FRS7_9STRA1.940e-8159.29Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A812YR71_SYMMI1.580e-7966.67PikE protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A836CGT8_9STRA2.820e-7962.61Phosphatidylinositol 3-kinase n=1 Tax=Tribonema mi... [more]
A0A7S3XVP8_HETAK2.840e-7959.55Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3HBK6_9STRA3.400e-7760.27Phosphatidylinositol 3-kinase n=1 Tax=Spumella elo... [more]
A0A6H5KKU1_9PHAE1.150e-7659.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1E7F450_9STRA4.380e-7656.19Kinase-like protein n=1 Tax=Fragilariopsis cylindr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7784contigEcto-sp13_S_contig7784:233..4848 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score274.6
Seed ortholog evalue2.5e-71
Seed eggNOG ortholog2880.D7FHY6
Model size1566
KEGG rclassRC00002,RC00078
KEGG koko:K00914
KEGG ReactionR03362
KEGG Pathwayko00562,ko01100,ko04070,ko04136,ko04138,ko04140,ko04145,ko04371,ko05152,ko05167,map00562,map01100,map04070,map04136,map04138,map04140,map04145,map04371,map05152,map05167
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.phosphatidylinositol kinase activity
EggNOG OGsCOG5032@1,KOG0906@2759
EC2.7.1.137
Cds size414
COG Functional cat.BDLTU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7784.19031.1prot_Ecto-sp13_S_contig7784.19031.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7784 2362..3952 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464048.905411-UTR-Ecto-sp13_S_contig7784:232..3461681464048.905411-UTR-Ecto-sp13_S_contig7784:232..346Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7784 233..346 +
1681464048.9168918-UTR-Ecto-sp13_S_contig7784:1186..12951681464048.9168918-UTR-Ecto-sp13_S_contig7784:1186..1295Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7784 1187..1295 +
1681464048.9263391-UTR-Ecto-sp13_S_contig7784:2328..23611681464048.9263391-UTR-Ecto-sp13_S_contig7784:2328..2361Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7784 2329..2361 +
1681464048.9676414-UTR-Ecto-sp13_S_contig7784:3952..48481681464048.9676414-UTR-Ecto-sp13_S_contig7784:3952..4848Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7784 3953..4848 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464048.9361937-CDS-Ecto-sp13_S_contig7784:2361..25261681464048.9361937-CDS-Ecto-sp13_S_contig7784:2361..2526Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7784 2362..2526 +
1681464048.9463913-CDS-Ecto-sp13_S_contig7784:3101..32511681464048.9463913-CDS-Ecto-sp13_S_contig7784:3101..3251Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7784 3102..3251 +
1681464048.9569309-CDS-Ecto-sp13_S_contig7784:3853..39521681464048.9569309-CDS-Ecto-sp13_S_contig7784:3853..3952Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7784 3854..3952 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7784.19031.1

>prot_Ecto-sp13_S_contig7784.19031.1 ID=prot_Ecto-sp13_S_contig7784.19031.1|Name=mRNA_Ecto-sp13_S_contig7784.19031.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=138bp
MMLPTGNLFHIDFGYIFGREAKPGATPIRFTQQMADAMGGVNSEDYRMFK
TYCCQAYNWLRKSANLILNLLSLMSDAGISDLSDDPVAALAKVEDNFRLD
LTDEMAENLFLRLIDTSLQALAPRVIELLHQIRVAGR*
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mRNA from alignment at Ecto-sp13_S_contig7784:233..4848+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7784.19031.1 ID=mRNA_Ecto-sp13_S_contig7784.19031.1|Name=mRNA_Ecto-sp13_S_contig7784.19031.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4616bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7784:233..4848+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCTAAAGCCCTACGGCATCCTAGCCACGGGGCCCCGGCACGGCTTGGTGG AATTCGTGTCCGGGTCCCAGCCAGTATCGGCGGTGCTCTCGGCGCACAAC GGGAGCATCTTAGAGTGAGTCTCCCAACGGAGAGCTGCCACGCTAACGCC CAAGGATTTCGGAAGCAGCAGTAGTATTTAGTGTCGGGATTGTAACCAAC GGTGTTGTAGTATGGTTGTTGTGGTTTTCCGTATTGGGTACCGTATGCAA CACAGGATAGCACACCCCCTGGACCGATTTTCAAAAGGTCGATTGATTAA CAGCAGAAGGAGCCGGACCGCCGGAAACGGCGACGTTGAAACCGTCTGGT GGAGAGCTTTCCGAGAACGTATCGTTTCGTTTACGCATCCTCTTCATGGT GGAGTAATCGAGCTTGGAGAATCGGTTCAGGGGGTGTGTTATCTTGTGTC GAACACGGTACGCACCCTATCGGCGGCGGCGGCGGCCTTGTCTCCGGCTG TGCGTTTTTTTAACTCTCTATTGTTCCGATTTTGTAGGGAAGACTCTGAC TTGTTGTGATTGGGGTTGCTGGCCAAAGACTTTTCGATCGGAGCTGCAGC CATTGCTGTCGTACGCCAAGGCCCTTTCGGAGGGGCGGAGAATAACGCAT GCGTAGGTACTGCTTCCCGTTGCGACAATCAAACCTTCGCGTCTGGTTGA TCACATTCATCATCCAAGGATATCTACAGATTTCCTTTGCCCTCCCCCCC ACAAACACACACTTCAACCTCGCGTGTACCCCCTCAAATCCTCGACCCAA GCAAAACTCCATACTCTCTCAAATTTATGCATAGGTCGTATGCAGGTCTC TCTCCGTGCGTTCAACAACACGCGGCGTGTCCCATCATTTTCAGATATTC GATCGCGCGCTCCTGCTCTCTCCATTTCTTTTTTGTCGTGTTGTGGGCGA GCAGGTACCTTCGCCACCACAATCCGGACCCCTCCGCCCCCAACGGCGTC AGGCCTGCGGCGGTCCAGACCTTCGTAAAGAGCACCGCCGGGTACTGCGT CATCACCTACCTGGTGAGAAGAAGAAGAGGGTTGGAGCGTGTCGCTGTCG GTTTTTTTTCTGGTGTGATTCTCCGACTGAGAAATAAATCGTGGTGGTTT GATTTAGTCCGTGGGTCTGCGAGTGGTCGGGGGGGGCGGGGGGGGAAAGA GCGCAGGCGTTTGTGTTTCGAGTGGGATTTTCTCGTATGATTGCGGGAGG AAAGGAAGGATATTACAGAAGAGTCCCCCCACGCTTTCAAGGCACGCGAT CGTTTTTTTTATTATGTGACCGTAAAGCGGGGAACTGCCCAAAAGTCCCG TTGATTTTTTTTTTTTTCCTTTTGCGGGGCACCATGCTGCTGAACATGGT GTCCTTCAAGGTTGGAGGATGGTACCCTTAAGGTGGGGACGAGTGAATGT ACAGAAGTGGTGGCGGGTCATGAGGTAGCCCAGGTAGCCCGCTGCCCCTA GAGTGTCGCGTTGGTTGGTTGGTTGGTCGGTCGGTCGGTTGGTTGTTTGG GTGGTTAGTTGCTGCGGTGGTTGTTTGTTGGTTGGGTGTTTGGTCGATAG GTTGGTCGTTGATTGGGTCGTTGGTTGGTCGGTTGGGGTTGTGGTTGCTT GTTTGGTTAGTTGGTTGTTTGGTTTGTTATTCCCGGTGCTGCTTTGTGTC CCGCTTGGGTATTTTGTGTTCTCTCCGCTTGTCTGGTCAGCAGAATCAAC CTGTAAGTGTGTACAACATACGGTTGAGCGATACCCGGCCGAGCCCTCCT TCCGTGGCCCTGCCTCCCCCGTGCTCACTCGTTTGCTTCAACCGCTAACA ATCACCATCTTCGTTACCCAACCGCCAGGCTCTGGCCCCTCGACCTTGCG CTGAAAAAACACTCATTGAACCAATGCCTCCCCCCGCCCCTGAAGGAACG ATTGGCCATCGGTGATCGGTCCTGTAGGAACAAAACTCCGTCCTCTCGAG GACGTGTGGACAATGATCCAACCGCGAAGGCATGCAAAACATAAGAGCAC GCTCCCCCCCCCCCCTCCTGTACCGTTTGTATGCCCCCCGCTTCAGCTGG GCATCGGAGACCGTCACCTGGACAACATCATGATGCTCCCTACAGGCAAC CTGTTCCACATCGACTTTGGGTACATCTTCGGGAGGGAGGCCAAGCCCGG CGCCACCCCTATCCGGTTCACGCAACAGATGGCTGATGCCATGGGCGGGG TGAACTCCGAGGACTACAGGATGTTCAAGACCTACTGTTGCCAGGTCAGT TTTTGATTTTTGGACAGCATCCATACAAACACAGAGAAAATACGTTGTTG TTGTTACTGTTGTTGATGTCTTCACATTAAATACTCTACCCGTTGAAATA TCACCACTGTATCCGACGGGGATGTGTTGAAGTATTTACCGGGAGTGTCT TTTTTGTTCTCTGCTGCTGCTGTTGTGCTTTCATTGCCGAAGCTCTGGTT TTGCTCTTTCGTCGAAATGAAATGGAGCGGTTGGTTCGTCTGTTGTTTGA GCTCGCGTGGTTGCACGGTTGTGTCTTGCCCGGTCCACTCGATTGCTTCA TGGTTTTTCGTTGTTGGAATGCTGTTCTATGCCATGCACCTTTTCCTTCG GACTTGGCGCCCGTCGTCCCGCTCCCTGCCGTGCGTATGTATGTATGCAT GTAAGTATTCCGGATTGATTTACGACGCCACCCCTCCCCGCTTGCATGTG TCCTGTTTTTCTGCACCTCATACCCTCTTCTCCTGCTCCTCCCCCTGCTC CTCCTCCTGCTCCTCCTCCTTGTGCTGCTCCTCCTCCTCCTCCTCCTCCT CCTCCTCCTCCTCCTCCAGGCGTACAACTGGCTTCGCAAGAGCGCGAACC TGATCCTGAACCTCCTCTCCCTCATGTCCGACGCCGGCATCTCCGACCTG TCAGACGACCCTGTCGCCGCCCTCGCGAAGGTGGAGGACAACTTCCGCCT CGACCTCACGGACGAAATGGTGGGTAAACTGTATAATACAACACATTGTG GTATTTTTCGTTTTTCTGTTCTGAAATATTTTTGTCAAATTCCACGTGGT TTGGTAATTTTTTCCCACGTGTCCTGTGCTATCCACCCACGCGATTCGAT TGTACCCACTGGTGTTGGTTGTTTCCTGGAGATTCAGTTCTTCTGGCGTG CAAACTAAGCTCAGGCTAAGTGCCCCACCTATCGGGCGTAGCTGAGTGTT GCGCCTGAGGGAGAAACCGAGAAACATGAAGGAGACTCGTGGGGGAAAAA AGGGAGAGAGCGTCAGGCGTGTCAAGGAGTGTGTGTCAGGCTTTCCAAGG ACCGCGTCGGTTAAAGACAGCAGGCACGCGCGAAGGTTTTGTTTTTTCGT TGCCAAGCGTATTGCCAGTTCACATACCTTTTTGCTAGGCATTGTAGGCT TACATGTGGTTTTACGGACGATCTTCAACTATGACGCATCTGACGACGTG CTGACATCGGCCTTGCGATGACGCCATCCTCCCTGTGTGCTTCCTGCTGC GACTGATACTACTACTGCTAATGGTACTGCTGCTGCTCTTGTTGCTGATG CTGCTGGTGCTGCTATTGCAGGCGGAAAACCTGTTCCTCAGGCTGATCGA CACGAGCCTCCAGGCTCTGGCGCCGAGGGTGATCGAGTTGTTACACCAGA TTCGCGTCGCCGGACGATAGAGCGCTCTGTGTTTCAATCTCCTCGCCGAA GATGCGCCGGCCGGTCAACACGTGTTCGTATGCCGATCACTACCGCTGCT ACCGCTGCTAGCGCTGTTACCTCTGCGGTCACTGCTAACGCTGGTGCGGA GTAGGCGGGGTCTTTTCTCGCAGAGGCGATCGGCTTCAGCCGGGTAGCCT GGGCGGCCCCGATCGAGGGGCATGTACGGGGGGGCGCGGCCATGTGGATG ACGCGGCGGCGACATGGTAGAAGAGAAAAGGAGAGACGATTATCGACGGC GATATGAGACCGAACAGGGGCGAGAAAATAATCAAACTGAGTCCACCTTC CAACGGCCGCGTGGGTGACATACACGTCGAGCCAGTCATCACCCCCCCCC CCGGTTTAAGTTGCCTTCTCTTGTCATTTGTGTTGATTATGTGGGTGGTC GTACGGCTGTTGTTGTGTGCGGTCAACTCATTCAGACTCCGCGAAACCCC CCTGCACCAGTGTGCGGCCGTGGCGTCTTCGTGTGGTGGTAACTCCGTCG CGCTGCACCGTGCAGGCGTGCGAACTGTGTGAAATGCACGAAGAGCCGAT CGAAATCGCTGCGATGCTCGTTGGGGGATTGGAGGTGGTAGTAGTTGCCA CCGTCGAGGACGTTTTGCTTCCTCTTGAGCTGAGGGTTGCTCGCACCGCC CAAAGCGGCAGTAGTCGCCCGAATGGTCGGGCCACTCTTTTTGTGCGACG GGCTCAGTCTATATGCGTGAAGCTGGGCGTGTTGATTGATACGATTGGGG GTTGACACGATGTACTTTGTATATACATTTTTTCTTGACAGGGAAGCAGC GGTGTGTGCGCGCGTCATGTGAGAATAGAGTGTTGGCAAATGATCCGTAT TGCGCCAACCGTGCTT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7784:233..4848+

>mRNA_Ecto-sp13_S_contig7784.19031.1 ID=mRNA_Ecto-sp13_S_contig7784.19031.1|Name=mRNA_Ecto-sp13_S_contig7784.19031.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=414bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7784:233..4848+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATGCTCCCTACAGGCAACCTGTTCCACATCGACTTTGGGTACATCTT
CGGGAGGGAGGCCAAGCCCGGCGCCACCCCTATCCGGTTCACGCAACAGA
TGGCTGATGCCATGGGCGGGGTGAACTCCGAGGACTACAGGATGTTCAAG
ACCTACTGTTGCCAGGCGTACAACTGGCTTCGCAAGAGCGCGAACCTGAT
CCTGAACCTCCTCTCCCTCATGTCCGACGCCGGCATCTCCGACCTGTCAG
ACGACCCTGTCGCCGCCCTCGCGAAGGTGGAGGACAACTTCCGCCTCGAC
CTCACGGACGAAATGGCGGAAAACCTGTTCCTCAGGCTGATCGACACGAG
CCTCCAGGCTCTGGCGCCGAGGGTGATCGAGTTGTTACACCAGATTCGCG
TCGCCGGACGATAG
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