mRNA_Ecto-sp13_S_contig7761.19003.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7761.19003.1
Unique NamemRNA_Ecto-sp13_S_contig7761.19003.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7761.19003.1 vs. uniprot
Match: A0A6H5J671_9PHAE (Adenylosuccinate lyase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J671_9PHAE)

HSP 1 Score: 299 bits (766), Expect = 4.330e-97
Identity = 147/149 (98.66%), Postives = 148/149 (99.33%), Query Frame = 1
Query:    1 GLDITDEQLEEMRSQVDNIDWDYAAKKEAEFRHDVMGHVHAFGHVCPKAMPIIHLGATSCFVGDNTDIVQIRDALLLLRRKLVKFLGVMKTFAAEYRALPTLGFTHYQPAQLTTVGKRATLWMQDFVLDVAALERCIEDLPMRGVKGTT 447
            GLDITDEQLEEMRSQVDNIDWDYAAKKEAEFRHDVMGHVHAFGHVCPKAMPIIHLGATSCFVGDNTDIVQIRDALLLLRRKLVKFLGVMK FAAE+RALPTLGFTHYQPAQLTTVGKRATLWMQDFVLDVAALERCIEDLPMRGVKGTT
Sbjct:  136 GLDITDEQLEEMRSQVDNIDWDYAAKKEAEFRHDVMGHVHAFGHVCPKAMPIIHLGATSCFVGDNTDIVQIRDALLLLRRKLVKFLGVMKAFAAEHRALPTLGFTHYQPAQLTTVGKRATLWMQDFVLDVAALERCIEDLPMRGVKGTT 284          
BLAST of mRNA_Ecto-sp13_S_contig7761.19003.1 vs. uniprot
Match: A0A835YZX3_9STRA (Adenylosuccinate lyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZX3_9STRA)

HSP 1 Score: 261 bits (667), Expect = 4.280e-83
Identity = 125/149 (83.89%), Postives = 137/149 (91.95%), Query Frame = 1
Query:    1 GLDITDEQLEEMRSQVDNIDWDYAAKKEAEFRHDVMGHVHAFGHVCPKAMPIIHLGATSCFVGDNTDIVQIRDALLLLRRKLVKFLGVMKTFAAEYRALPTLGFTHYQPAQLTTVGKRATLWMQDFVLDVAALERCIEDLPMRGVKGTT 447
            GLD+T EQ+EEM++Q+DNIDW+YA +KEAEFRHDVMGHVHAFG VCPKAMPIIHLGATSC+VGDNTDIVQIRDALLL+RRKLVK L VM  FA +++ L TLGFTHYQPAQLTTVGKR TLWMQD VLDVAALERCIEDLPMRGVKGTT
Sbjct:   61 GLDVTTEQIEEMKAQIDNIDWEYAEQKEAEFRHDVMGHVHAFGKVCPKAMPIIHLGATSCYVGDNTDIVQIRDALLLVRRKLVKLLAVMAAFADKHKELATLGFTHYQPAQLTTVGKRCTLWMQDLVLDVAALERCIEDLPMRGVKGTT 209          
BLAST of mRNA_Ecto-sp13_S_contig7761.19003.1 vs. uniprot
Match: A0A7S0C5S7_9STRA (Adenylosuccinate lyase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C5S7_9STRA)

HSP 1 Score: 239 bits (610), Expect = 6.680e-75
Identity = 115/149 (77.18%), Postives = 129/149 (86.58%), Query Frame = 1
Query:    1 GLDITDEQLEEMRSQVDNIDWDYAAKKEAEFRHDVMGHVHAFGHVCPKAMPIIHLGATSCFVGDNTDIVQIRDALLLLRRKLVKFLGVMKTFAAEYRALPTLGFTHYQPAQLTTVGKRATLWMQDFVLDVAALERCIEDLPMRGVKGTT 447
            G+DITDEQLEE+R+ V NID+DYAA+KE EFRHDVMGHVHAFGH  P AMPIIHLGATSC+VGDNTD++QIRDAL LL+RKLV  L VMK FA +YR +PTLGFTHYQPAQLTTVGKR TLWMQD +LD   + R I+DLPMRGVKGTT
Sbjct:   29 GIDITDEQLEELRTNVYNIDFDYAAEKEREFRHDVMGHVHAFGHAAPAAMPIIHLGATSCYVGDNTDLIQIRDALELLKRKLVNVLNVMKNFAEKYRDMPTLGFTHYQPAQLTTVGKRCTLWMQDLILDYEKVSREIDDLPMRGVKGTT 177          
BLAST of mRNA_Ecto-sp13_S_contig7761.19003.1 vs. uniprot
Match: A0A1Z5K4Z2_FISSO (Adenylosuccinate lyase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K4Z2_FISSO)

HSP 1 Score: 230 bits (586), Expect = 6.460e-71
Identity = 110/149 (73.83%), Postives = 130/149 (87.25%), Query Frame = 1
Query:    1 GLDITDEQLEEMRSQVDNIDWDYAAKKEAEFRHDVMGHVHAFGHVCPKAMPIIHLGATSCFVGDNTDIVQIRDALLLLRRKLVKFLGVMKTFAAEYRALPTLGFTHYQPAQLTTVGKRATLWMQDFVLDVAALERCIEDLPMRGVKGTT 447
            GLDI+DEQLEEMR+ + ++D++ AAKKEAEFRHDVMGHVHAFG   PKAMP+IHLGATSCFVGDNTD+VQ+R+ L L++RKLVK L  +K FA +Y+ LPTLGFTHYQPAQLTTVGKR TLWMQD +LD+  +ER IE+LPMRGVKGTT
Sbjct:   65 GLDISDEQLEEMRNHIYDVDFEVAAKKEAEFRHDVMGHVHAFGSQAPKAMPVIHLGATSCFVGDNTDLVQLREGLHLIKRKLVKVLATLKEFALKYKDLPTLGFTHYQPAQLTTVGKRCTLWMQDLMLDLERVEREIENLPMRGVKGTT 213          
BLAST of mRNA_Ecto-sp13_S_contig7761.19003.1 vs. uniprot
Match: B7FS29_PHATC (Adenylosuccinate lyase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FS29_PHATC)

HSP 1 Score: 229 bits (584), Expect = 1.350e-70
Identity = 110/149 (73.83%), Postives = 129/149 (86.58%), Query Frame = 1
Query:    1 GLDITDEQLEEMRSQVDNIDWDYAAKKEAEFRHDVMGHVHAFGHVCPKAMPIIHLGATSCFVGDNTDIVQIRDALLLLRRKLVKFLGVMKTFAAEYRALPTLGFTHYQPAQLTTVGKRATLWMQDFVLDVAALERCIEDLPMRGVKGTT 447
            G+DITDEQLEEMR+ +  +D++ AA+KE+EFRHDVMGHVHAFG   PKAMP+IHLGATSC+VGDNTDIVQIRDAL L++RKLVK L  +KTFA +YR LPTLGFTHYQPAQLTTVGKR TLWMQD +LD+  ++  +E LPMRGVKGTT
Sbjct:   67 GIDITDEQLEEMRTNLFRVDFELAAQKESEFRHDVMGHVHAFGAAAPKAMPVIHLGATSCYVGDNTDIVQIRDALKLVQRKLVKVLATLKTFAEKYRDLPTLGFTHYQPAQLTTVGKRCTLWMQDLLLDMERIDTELEKLPMRGVKGTT 215          
BLAST of mRNA_Ecto-sp13_S_contig7761.19003.1 vs. uniprot
Match: A0A7S2UPT1_9STRA (Adenylosuccinate lyase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UPT1_9STRA)

HSP 1 Score: 228 bits (580), Expect = 4.200e-70
Identity = 107/149 (71.81%), Postives = 129/149 (86.58%), Query Frame = 1
Query:    1 GLDITDEQLEEMRSQVDNIDWDYAAKKEAEFRHDVMGHVHAFGHVCPKAMPIIHLGATSCFVGDNTDIVQIRDALLLLRRKLVKFLGVMKTFAAEYRALPTLGFTHYQPAQLTTVGKRATLWMQDFVLDVAALERCIEDLPMRGVKGTT 447
            G++I+DEQLE+MR+ + N+D+D+A  KE EFRHDVMGHVHAFG V P AMPIIHLGATSC+VGDNTD++QIRDAL L++RKLVK +G++K FA +YR LPTLGFTHYQPAQLTTVGKRATLWMQD +LD+  +   I+ LPMRGVKGTT
Sbjct:   57 GIEISDEQLEQMRANLYNVDFDFADAKEREFRHDVMGHVHAFGEVAPAAMPIIHLGATSCYVGDNTDLIQIRDALKLIQRKLVKAIGILKKFAVQYRDLPTLGFTHYQPAQLTTVGKRATLWMQDLLLDLERVNHEIDSLPMRGVKGTT 205          
BLAST of mRNA_Ecto-sp13_S_contig7761.19003.1 vs. uniprot
Match: A0A7S4R0K5_9STRA (Adenylosuccinate lyase n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R0K5_9STRA)

HSP 1 Score: 228 bits (580), Expect = 1.910e-69
Identity = 106/149 (71.14%), Postives = 133/149 (89.26%), Query Frame = 1
Query:    1 GLDITDEQLEEMRSQVDNIDWDYAAKKEAEFRHDVMGHVHAFGHVCPKAMPIIHLGATSCFVGDNTDIVQIRDALLLLRRKLVKFLGVMKTFAAEYRALPTLGFTHYQPAQLTTVGKRATLWMQDFVLDVAALERCIEDLPMRGVKGTT 447
            G+DI+D QLEEMR+++ +ID++YAAKKE+EFRHDVMGHVHAFG   P AMPIIHLGATSC+VGDNTD+VQ+R++L L++RKLVK + ++K FA ++R LPTLGFTHYQPAQLTTVGKR+TLWMQD +LD+  +ER I++LPMRGVKGTT
Sbjct:  123 GIDISDTQLEEMRAKLYDIDFEYAAKKESEFRHDVMGHVHAFGAAAPSAMPIIHLGATSCYVGDNTDLVQLRESLKLIKRKLVKTIAILKAFAVKHRDLPTLGFTHYQPAQLTTVGKRSTLWMQDLILDLERVEREIDELPMRGVKGTT 271          
BLAST of mRNA_Ecto-sp13_S_contig7761.19003.1 vs. uniprot
Match: A0A7S3LFQ6_9STRA (Adenylosuccinate lyase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LFQ6_9STRA)

HSP 1 Score: 225 bits (574), Expect = 4.100e-69
Identity = 108/149 (72.48%), Postives = 129/149 (86.58%), Query Frame = 1
Query:    1 GLDITDEQLEEMRSQVDNIDWDYAAKKEAEFRHDVMGHVHAFGHVCPKAMPIIHLGATSCFVGDNTDIVQIRDALLLLRRKLVKFLGVMKTFAAEYRALPTLGFTHYQPAQLTTVGKRATLWMQDFVLDVAALERCIEDLPMRGVKGTT 447
            GL+ITDEQLEEMR+ + N+D+  A +KE EFRHDVMGHVHAFG + PKAMP+IHLGATSC+VGDNTD+VQIR+AL L++RKLVK L  +K FA +YR LPTLGFTHYQPAQLTTVGKR+TLWMQD ++D+  +E+ IE LPMRGVKGTT
Sbjct:   66 GLNITDEQLEEMRANLFNVDFALANEKEKEFRHDVMGHVHAFGTIAPKAMPVIHLGATSCYVGDNTDLVQIREALKLIKRKLVKVLATLKEFAVKYRDLPTLGFTHYQPAQLTTVGKRSTLWMQDLMMDLERVEQEIETLPMRGVKGTT 214          
BLAST of mRNA_Ecto-sp13_S_contig7761.19003.1 vs. uniprot
Match: A0A7S3PWJ1_9STRA (Adenylosuccinate lyase (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PWJ1_9STRA)

HSP 1 Score: 224 bits (571), Expect = 6.000e-69
Identity = 105/149 (70.47%), Postives = 131/149 (87.92%), Query Frame = 1
Query:    1 GLDITDEQLEEMRSQVDNIDWDYAAKKEAEFRHDVMGHVHAFGHVCPKAMPIIHLGATSCFVGDNTDIVQIRDALLLLRRKLVKFLGVMKTFAAEYRALPTLGFTHYQPAQLTTVGKRATLWMQDFVLDVAALERCIEDLPMRGVKGTT 447
            G+DI+DEQL++MR  + +ID+DYAA+KE EFRHDVMGHVHA+G V PKAMPIIHLGATSC+V DNT+++QI+DALLL++RK++K + V+K FA E+R LPTLGFTHYQPAQLTTVGKR TLWMQD +LD+  +++ I DLPMRGVKGTT
Sbjct:   46 GIDISDEQLKQMRDSLYDIDFDYAAEKEREFRHDVMGHVHAYGKVAPKAMPIIHLGATSCYVTDNTELIQIKDALLLIKRKILKTIHVLKKFAVEHRDLPTLGFTHYQPAQLTTVGKRCTLWMQDLLLDLKRIDQEIRDLPMRGVKGTT 194          
BLAST of mRNA_Ecto-sp13_S_contig7761.19003.1 vs. uniprot
Match: A0A7S3PZH9_9STRA (Adenylosuccinate lyase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZH9_9STRA)

HSP 1 Score: 225 bits (573), Expect = 6.050e-69
Identity = 105/149 (70.47%), Postives = 133/149 (89.26%), Query Frame = 1
Query:    1 GLDITDEQLEEMRSQVDNIDWDYAAKKEAEFRHDVMGHVHAFGHVCPKAMPIIHLGATSCFVGDNTDIVQIRDALLLLRRKLVKFLGVMKTFAAEYRALPTLGFTHYQPAQLTTVGKRATLWMQDFVLDVAALERCIEDLPMRGVKGTT 447
            G++ITDEQL +MR ++ +ID+D+AAKKE EFRHDVMGHVHAFG V P+AMPIIHLGATSC+VGDNTDI+QI++ALLL++RKLV+ + ++K FA +++ LPTLGFTHYQPAQLTTVGKR TLWMQD +LD+  +++ I+DLPMRGVKGTT
Sbjct:   68 GIEITDEQLAQMRDKLYDIDFDFAAKKEREFRHDVMGHVHAFGEVAPQAMPIIHLGATSCYVGDNTDIIQIKEALLLIKRKLVQTIDILKQFAVKHKDLPTLGFTHYQPAQLTTVGKRCTLWMQDLLLDLYKVDQEIKDLPMRGVKGTT 216          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7761.19003.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J671_9PHAE4.330e-9798.66Adenylosuccinate lyase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A835YZX3_9STRA4.280e-8383.89Adenylosuccinate lyase n=1 Tax=Tribonema minus Tax... [more]
A0A7S0C5S7_9STRA6.680e-7577.18Adenylosuccinate lyase n=1 Tax=Proboscia inermis T... [more]
A0A1Z5K4Z2_FISSO6.460e-7173.83Adenylosuccinate lyase n=2 Tax=Fistulifera solaris... [more]
B7FS29_PHATC1.350e-7073.83Adenylosuccinate lyase n=2 Tax=Phaeodactylum trico... [more]
A0A7S2UPT1_9STRA4.200e-7071.81Adenylosuccinate lyase n=1 Tax=Attheya septentrion... [more]
A0A7S4R0K5_9STRA1.910e-6971.14Adenylosuccinate lyase n=4 Tax=Ditylum brightwelli... [more]
A0A7S3LFQ6_9STRA4.100e-6972.48Adenylosuccinate lyase n=1 Tax=Amphora coffeiformi... [more]
A0A7S3PWJ1_9STRA6.000e-6970.47Adenylosuccinate lyase (Fragment) n=1 Tax=Chaetoce... [more]
A0A7S3PZH9_9STRA6.050e-6970.47Adenylosuccinate lyase n=1 Tax=Chaetoceros debilis... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7761contigEcto-sp13_S_contig7761:5720..7288 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score298.9
Seed ortholog evalue1.3e-78
Seed eggNOG ortholog2880.D8LG38
Preferred nameADSL
Model size447
KEGG rclassRC00379,RC00444,RC00445
KEGG koko:K01756
KEGG ReactionR01083,R04559
KEGG Pathwayko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130
KEGG ModuleM00048,M00049
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004018,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006106,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007584,GO:0008150,GO:0008152,GO:0009058,GO:0009060,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009605,GO:0009987,GO:0009991,GO:0015980,GO:0016043,GO:0016829,GO:0016840,GO:0016842,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0022607,GO:0031667,GO:0034641,GO:0034654,GO:0042221,GO:0043436,GO:0043648,GO:0043933,GO:0044085,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0050896,GO:0051259,GO:0051262,GO:0055086,GO:0055114,GO:0065003,GO:0070626,GO:0071704,GO:0071840,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
Exons3
EggNOG free text desc.(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity
EggNOG OGsCOG0015@1,KOG2700@2759
EC4.3.2.2
Cds size447
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464046.488051-CDS-Ecto-sp13_S_contig7761:5719..58631681464046.488051-CDS-Ecto-sp13_S_contig7761:5719..5863Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7761 5720..5863 +
1681464046.5053847-CDS-Ecto-sp13_S_contig7761:6422..66501681464046.5053847-CDS-Ecto-sp13_S_contig7761:6422..6650Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7761 6423..6650 +
1681464046.514722-CDS-Ecto-sp13_S_contig7761:7213..72881681464046.514722-CDS-Ecto-sp13_S_contig7761:7213..7288Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7761 7214..7288 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7761.19003.1prot_Ecto-sp13_S_contig7761.19003.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7761 5720..7288 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7761.19003.1

>prot_Ecto-sp13_S_contig7761.19003.1 ID=prot_Ecto-sp13_S_contig7761.19003.1|Name=mRNA_Ecto-sp13_S_contig7761.19003.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=149bp
GLDITDEQLEEMRSQVDNIDWDYAAKKEAEFRHDVMGHVHAFGHVCPKAM
PIIHLGATSCFVGDNTDIVQIRDALLLLRRKLVKFLGVMKTFAAEYRALP
TLGFTHYQPAQLTTVGKRATLWMQDFVLDVAALERCIEDLPMRGVKGTT
back to top

mRNA from alignment at Ecto-sp13_S_contig7761:5720..7288+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7761.19003.1 ID=mRNA_Ecto-sp13_S_contig7761.19003.1|Name=mRNA_Ecto-sp13_S_contig7761.19003.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1569bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7761:5720..7288+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGGCTGGACATCACGGACGAGCAGCTCGAGGAGATGCGTTCCCAGGTCGA CAACATTGACTGGGACTACGCCGCTAAGAAGGAAGCCGAGTTCAGGCACG ACGTCATGGGCCACGTCCACGCCTTCGGCCACGTTTGCCCCAAGGTTGGC CCGCTTGTTTTCCACACCTGTCCGACCCAGCCGACGTCTCTGGTATCCCT AGCCCTCATGATACACCTTCATCCAGTCCAAGCCTTCCTTTGTTTATTCC TCTAGTGGACGCTGGGCCTTTTTTGTGGAAGGCCTCGTGTGTGTCTTGTA AAATACAAATTCCGCGTTCCCACTCGAGGGTCACATTCATGATATGTCCA TGCGTTTCACGTACACTCCCCGGCTTTAGTGGAACCCAGTCAGCCAAGAC CATCCCCGTTTCGGTGAGGCGGTGTCTCTCTGGCAAGAATTGAGCAGCGC AATCCATGCCCGGCGTCTATTTTTTCTTGTGGGGAAGATTCAACTCACTT CTGTCCCGTGCTGTTCGTCAGTGGACTCAATTGGTCGCAGTTTACTTTTA AAATATGTGGTCGAGATGGCGTCTGGCACTTGAGCAAACCTGGCGCACAA ACACGTTGAACCAACACGCGCGATTACTGTGCTTCCCTCACTCCTGTTAA TGTTGTCGGGTCTTTCGTCTATGCTCGTCCTCTCCCTCTTGTTGTTCTGT CAGGCCATGCCGATCATCCACCTGGGAGCGACGTCGTGCTTCGTCGGAGA CAACACTGACATTGTTCAGATCCGCGACGCCCTCCTCCTGCTCCGGCGCA AGCTCGTGAAGTTTTTGGGCGTGATGAAGACCTTCGCCGCCGAGTACCGC GCTCTGCCCACCCTCGGGTTCACTCACTACCAGCCGGCACAGCTCACCAC CGTGGGGAAGCGCGCCACGCTTTGGATGCAGGTACTCGTAACCGCACCCC AACAATGTATGTTTCCCAATGCCACGATTTTGCTGTGAACAGTGTTTTCG GTGTGGACACCCATGCTTTCAACGTGGGCGAGTTGGGCGAGCGTTGATGT TCTGCTTTGAAGGAGAGGTCGGAGAATCAAGTGGAGCTTTTTGAAAGTGG TCGCGGGGGTCGAATTTTCATGGGCACGATGCGGACAAGAAACGAAGAAT GTGTCGGTGTACATCGGCAAGGGGGTCCAGCCAAGGTACAGGTAGACGTG GTCCCTGCAACAGTCTTCTGTCTGGGATCTCGCCCACGACGTACCTGTGG TTGTGGCTCGCTCGTCTTGTCGCCGATGAGCGACGTCGCGGCTTCCCCCC CTCGCTAGGTCCCCCTCGCTAGGCCTCGCTGCCCCTTGGGATCCTCATAC TGAAGCAGGTCGCGCTCTGCGTGTACCGCCGTGTCGTCCGTCGCTCGTGA GTAAGAATCGCTAACCGCACGTGCACTGCTGCAATTTGCTGTTCTCCCGC ACTTCCTTGTTCTTGTTTTCTCTTCCCGCCTTCTTCTCGTTTAGGACTTT GTCCTGGATGTGGCCGCCTTGGAACGGTGCATCGAGGATCTGCCGATGAG GGGTGTCAAGGGGACCACA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7761:5720..7288+

>mRNA_Ecto-sp13_S_contig7761.19003.1 ID=mRNA_Ecto-sp13_S_contig7761.19003.1|Name=mRNA_Ecto-sp13_S_contig7761.19003.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=447bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7761:5720..7288+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGGCTGGACATCACGGACGAGCAGCTCGAGGAGATGCGTTCCCAGGTCGA
CAACATTGACTGGGACTACGCCGCTAAGAAGGAAGCCGAGTTCAGGCACG
ACGTCATGGGCCACGTCCACGCCTTCGGCCACGTTTGCCCCAAGGCCATG
CCGATCATCCACCTGGGAGCGACGTCGTGCTTCGTCGGAGACAACACTGA
CATTGTTCAGATCCGCGACGCCCTCCTCCTGCTCCGGCGCAAGCTCGTGA
AGTTTTTGGGCGTGATGAAGACCTTCGCCGCCGAGTACCGCGCTCTGCCC
ACCCTCGGGTTCACTCACTACCAGCCGGCACAGCTCACCACCGTGGGGAA
GCGCGCCACGCTTTGGATGCAGGACTTTGTCCTGGATGTGGCCGCCTTGG
AACGGTGCATCGAGGATCTGCCGATGAGGGGTGTCAAGGGGACCACA
back to top