mRNA_Ecto-sp13_S_contig7759.18993.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7759.18993.1
Unique NamemRNA_Ecto-sp13_S_contig7759.18993.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7759.18993.1 vs. uniprot
Match: A0A6H5L6D9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D9_9PHAE)

HSP 1 Score: 855 bits (2209), Expect = 1.790e-289
Identity = 440/533 (82.55%), Postives = 467/533 (87.62%), Query Frame = 1
Query:    1 MDDWCLVRSRGSLTVEDVIL--ERDQEDGARRYNELSAKLCRGVFTEARNNSDRSAADTCAESELRKAITPEGKTPQQLRYAFIQKGSTKRLSDMKVAIQRIQGIWRGAPAGKAGAPFILGGDEETYKHMYHVMAQEPREYRQARRYPGDWHLLLHMAKAMLRRNWGAGVEFVAKDLGIDGSKSGEGSKYRRAHHHITAFWAAFMALCREEYLKGFPTPGDRPVEDYKVVDGVVRWIVAREDFRSVEAVPPPRL----PCVIAFGTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDMRVASQLFSVSLGPDTFARIGLDERQEVSNRPYRTLTKRILSSTIEKLAPIAQLRKVAIFDFESLFIEKPRTERDPCRELAVKRAPAVRAAMKCLRDSTAFKGDDGKDKVVALDGSVLPPVEWQEILDAAAKGRAKMRECILYYIFKKKTL-----EGATKKKAFFILATNSTTTATKIQGRSSALKDSVGNAYAGSQEWKGLTLNMFDAAKEGGGVVTQ 1566
            MDDW +V+SRGSLTVEDV++  ERD+EDGARRYNE S++L RGVF EARNNSDR+AADTC ESELR AITPEGK+PQQLRYAFIQKGSTKR SDMK AIQRIQGIW G+PAGKAGAPFILGGDEETYKHMYHVMAQEPREYRQ RRYPGDWHLLLHMAKAMLRR WGAGVEFVAKDLG DGSKSGEGS YRRAHHHITAFWAAFMALCREEYLK   TPGDRPVE+ +VVDGVVRWIVAR +     AV    L    P  IAF TALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDMRV S+LFSVSLGPDTFARIGLDERQEVSNR Y+TLTKRILSSTIEKLAPIAQLR+VAIFDFES FIEKPRTERD CRELAVKRAPAVRAAM CLR+S  F+G+DGKDKVVALDG V PPV+ QEI+D+ A  RAK+REC+LYY+FKKK L     +GATKKK F I A NS   ATK QGRSSALKDSVGNAYAG QEWK LTLNM DAA+EGGGVVTQ
Sbjct:  796 MDDWWMVKSRGSLTVEDVLMGPERDREDGARRYNEFSSELYRGVFAEARNNSDRAAADTCFESELRTAITPEGKSPQQLRYAFIQKGSTKRFSDMKAAIQRIQGIWCGSPAGKAGAPFILGGDEETYKHMYHVMAQEPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYLKSLSTPGDRPVEEDEVVDGVVRWIVARTESHKTFAVWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDMRVVSELFSVSLGPDTFARIGLDERQEVSNRLYKTLTKRILSSTIEKLAPIAQLREVAIFDFESHFIEKPRTERDRCRELAVKRAPAVRAAMDCLRESPVFEGNDGKDKVVALDGRVFPPVKSQEIIDSPANARAKLRECVLYYVFKKKKLNGTKLKGATKKKVFSIPARNSINKATKSQGRSSALKDSVGNAYAGGQEWKALTLNMIDAAREGGGVVTQ 1328          
BLAST of mRNA_Ecto-sp13_S_contig7759.18993.1 vs. uniprot
Match: D7FIA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIA9_ECTSI)

HSP 1 Score: 791 bits (2042), Expect = 1.370e-281
Identity = 406/490 (82.86%), Postives = 428/490 (87.35%), Query Frame = 1
Query:  124 VFTEARNNSDRSAADTCAESELRKAITPEGKTPQQLRYAFIQKGSTKRLSDMKVAIQRIQGIWRGAPAGKAGAPFILGGDEETYKHMYHVMAQEPREYRQARRYPGDWHLLLHMAKAMLRRNWGAGVEFVAKDLGIDGSKSGEGSKYRRAHHHITAFWAAFMALCREEYLKGFPTPGDRPVEDYKVVDGVVRWIVAREDFRSVEAVPPPRL----PCVIAFGTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDMRVASQLFSVSLGPDTFARIGLDERQEVSNRPYRTLTKRILSSTIEKLAPIAQLRKVAIFDFESLFIEKPRTERDPCRELAVKRAPAVRAAMKCLRDSTAFKGDDGKDKVVALDGSVLPPVEWQEILDAAAKGRAKMRECILYYIFKKKTL-----EGATKKKAFFILATNSTTTATKIQGRSSALKDSVGNAYAGSQEWKGLTLNMFDAAKEGGGVVTQ 1566
             ++  R  +DR+AADTC ESELRKAITPEGK+PQQLRYAFIQKGSTKR SDMK AIQR+QGIW G+PAGKAGAPFILGGDEETYKHMYHVMAQ+PREYRQ RRYPGDWHLLLHMAKAMLRR WGAGVEFVAKDLG DGSKSGEGS YRRAHHHITAFWAAFMALCREEYLK  PTP DRPVE+ KVVDGVVRWIVAR + R   AV    L    P  IAF TALRTGNF LRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRY RNDMRV S+LFSVSLGPDTFARIGLDERQEVSNR Y+TLTKRILSSTIEKLAPIAQLR+VAIFDFES FIEKPRTERD CRELAVKRAPAVRAAM CLR+S AF+G DGKDKVVALDG V PPV+WQEILD++AK RAK+RECILYY+FKKK L     +GATKKK F I A NS   ATK QGRSSAL DSVGNAYAG QEWK LTLNMFDAA+EGGGVVTQ
Sbjct:   80 AYSLRRGTTDRAAADTCFESELRKAITPEGKSPQQLRYAFIQKGSTKRFSDMKGAIQRVQGIWCGSPAGKAGAPFILGGDEETYKHMYHVMAQDPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYLKSLPTPSDRPVEEDKVVDGVVRWIVARAESRKTFAVWKQFLLHDYPAYIAFRTALRTGNFGLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYLRNDMRVVSELFSVSLGPDTFARIGLDERQEVSNRLYKTLTKRILSSTIEKLAPIAQLREVAIFDFESHFIEKPRTERDRCRELAVKRAPAVRAAMDCLRESPAFEGGDGKDKVVALDGRVFPPVKWQEILDSSAKARAKLRECILYYVFKKKKLNGAKLKGATKKKVFSIPARNSINKATKSQGRSSALNDSVGNAYAGGQEWKALTLNMFDAAREGGGVVTQ 569          
BLAST of mRNA_Ecto-sp13_S_contig7759.18993.1 vs. uniprot
Match: A0A6H5JYE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYE1_9PHAE)

HSP 1 Score: 670 bits (1729), Expect = 3.220e-233
Identity = 346/439 (78.82%), Postives = 366/439 (83.37%), Query Frame = 1
Query:  277 MKVAIQRIQGIWRGAPAGKAGAPFILGGDEETYKHMYHVMAQEPREYRQARRYPGDWHLLLHMAKAMLRRNWGAGVEFVAKDLGIDGSKSGEGSKYRRAHHHITAFWAAFMALCREEYLKGFPTPGDRPVEDYKVVDGVVRWIVAREDFRSVEAVPPPRLPC----VIAFGTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDMRVASQLFSVSLGPDTFARIGLDERQEVSNRPYRTLTKRILSSTIEKLAPIAQLRKVAIFDFESLFIEKPRTERDPCRELAVKRAPAVRAAMKCLRDSTAFKGDDGKDKVVALDGSVLPPVEWQEILDAAAKGRAKMRECILYYIFKKKTLEGA-----TKKKAFFILATNSTTTATKIQGRSSALKDSVGNAYAGSQEWKGLTLNMFDAAKEGGGVVTQ 1566
            MK AIQR+QGIW G+ AGKAGAPFILGGDEETYKHMYHVMAQ+PREYRQ RRYPGDWHLLLHMAK MLRR WGAGVEFVAKDLG DGSKSGEGS YRRAHHH  AFWAAF+ALCR+EYL+  PTPGDRPVE+  VVDGVVRWIVAR +     AV    L       IAF TALRTGNFRLRLEGLRRIAPI F+TGKDKYQFLV DHLTEVS YSRNDMRV S+LFSVS GPDTFARIGLDER+EVSNR Y+TL KRILSSTIEKL PIAQLR+VAIFDFES FIEK RTERD CRE  VKRAPAV AAM CLR+S A +GDDGKDKV ALDG V PPV+WQE LD+ AK RAKMREC+LYY+FKKK L GA     TKKK F I A NS   ATK QGRSSALKDSV NAYAG QEWK LTLNMFDAA+EGGGVVTQ
Sbjct:    1 MKGAIQRVQGIWCGSLAGKAGAPFILGGDEETYKHMYHVMAQKPREYRQVRRYPGDWHLLLHMAKVMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHAMAFWAAFIALCRQEYLESLPTPGDRPVEEDNVVDGVVRWIVARAESHKTFAVWKQFLLHDYHEYIAFRTALRTGNFRLRLEGLRRIAPILFVTGKDKYQFLVADHLTEVSGYSRNDMRVVSELFSVSHGPDTFARIGLDERKEVSNRLYKTLAKRILSSTIEKLTPIAQLREVAIFDFESHFIEKTRTERDRCREFVVKRAPAVMAAMDCLRESPALEGDDGKDKVAALDGRVFPPVKWQEFLDSPAKARAKMRECVLYYVFKKKKLNGAKLNGATKKKIFSIPARNSINKATKRQGRSSALKDSVRNAYAGGQEWKALTLNMFDAAREGGGVVTQ 439          
BLAST of mRNA_Ecto-sp13_S_contig7759.18993.1 vs. uniprot
Match: A0A6H5JND3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JND3_9PHAE)

HSP 1 Score: 544 bits (1401), Expect = 1.690e-178
Identity = 314/504 (62.30%), Postives = 338/504 (67.06%), Query Frame = 1
Query:  193 KAITPEGKTPQQLRYAFIQKGSTKRLSDMKVAIQRIQGIWRGAPAGKAGAPFILGGDEETYKHMYHVMAQEPREYRQARRYPGDWHL----LLHMAKAMLRRNWGAGVEFVAKDLGIDGSKSGEGSKYRRAHHHITAFWAAFMALCREEYLKGFPTPGDRPVEDYKVVDGVVRWIVAREDFRSVEAVPPPRL----PCVIAFGTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDMRVASQLFSVSLGPDTFARIGLDERQEVSNRPYRTLTKRILSSTIEKLAPIAQLRKVAIFDFESLFIEKPRTERDPCRELAVK--------------------------------------RAPAVRAAMKCLRDSTAFKGDDGKDKVVALDGSVLPPVEWQEILDAAAKGRAKMRECILYYIFKKKTLEGATKKKAFFILATNSTTTATKIQGRSSALKDSVGNAYAGSQEWKGLTLNMFDAAKEGGGVVTQ 1566
            KAITP+   PQQLRYAFIQKGSTKR  DMK AIQ +QGIW G  AGKAGAPFILGGDE+   H         R      +      +    LL +AKAM  R WGAGVEFVAKDLG DGSKSGEGS YRRAHHH TAFWA FMALCR+EYLK  PTPGDRPVE+ KVVDGVVRWIVAR +     +V    L    P  IAF T LRTGN RLRLEGLR                    HLTEVSRYSRNDMRV S+LFSVSLGPDTFARIGLDERQEVSNR Y+TLTKR+LSSTIEKLAPI QLR+V IFDFES  IEKPR ERD CRELAVK                                      RAPAVRAA+ CLR+S AF+GDDGKDKVVALDG V PPV+WQ+ILD++AK RAKMREC            GATK+K   I A NS   ATK QGRSSALKDSVGN YA  Q+WK LTLNMFDAA+EG GVV Q
Sbjct:   18 KAITPDCILPQQLRYAFIQKGSTKRFIDMKGAIQPVQGIWCGTLAGKAGAPFILGGDEDR-NHTSPCTTSWHRSRASTDKSVASPAIGMCCLLQVAKAMHWRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHKTAFWAVFMALCRQEYLKSLPTPGDRPVEEGKVVDGVVRWIVARAESYKTFSVWKQFLLLDYPAYIAFRTTLRTGNLRLRLEGLRH-------------------HLTEVSRYSRNDMRVISELFSVSLGPDTFARIGLDERQEVSNRLYKTLTKRVLSSTIEKLAPITQLREVVIFDFESHLIEKPRMERDRCRELAVKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPAVRAAIDCLRESPAFEGDDGKDKVVALDGRVFPPVKWQDILDSSAKARAKMREC------------GATKEKILSIPARNSINKATKSQGRSSALKDSVGNPYAAEQQWKALTLNMFDAAREGRGVVAQ 489          
BLAST of mRNA_Ecto-sp13_S_contig7759.18993.1 vs. uniprot
Match: A0A6H5JA33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA33_9PHAE)

HSP 1 Score: 507 bits (1306), Expect = 1.420e-175
Identity = 262/324 (80.86%), Postives = 275/324 (84.88%), Query Frame = 1
Query:  382 MYHVMAQEPREYRQARRYPGDWHLLLHMAKAMLRRNWGAGVEFVAKDLGIDGSKSGEGSKYRRAHHHITAFWAAFMALCREEYLKGFPTPGDRPVEDYKVVDGVVRWIVAREDFRSVEAVPPPRL----PCVIAFGTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDMRVASQLFSVSLGPDTFARIGLDERQEVSNRPYRTLTKRILSSTIEKLAPIAQLRKVAIFDFESLFIEKPRTERDPCRELAVKRAPAVRAAMKCLRDSTAFKGDDGKDKVVALDGSVLPPVEWQEILDAAAKGRAKMREC 1341
            MYHVMAQEPREYRQ RRYPGDWH LLHMAKAMLRR WGAGVEFVAKDLG DGSKSGEGS YRRAHHHITAFWAAFMALCREEYL   P PGDRPVE+  VVDGVV W+VAR   R    V    L    P  IAF TALRTGNFRLRLEGL RIAPIFFITGKDKYQFLVV HLTEVSRYSRN MRV S+LFSVSL PDTFARIGLDERQEVSNR Y+TLTKRILSSTIEKLAPIAQLR+VAIFDFES FIEKPRTERD CR+LAVKRAPAVRAAM CLR+S AF+GDDG DKVVAL   V PPV+WQEILD+ AK R + ++C
Sbjct:    1 MYHVMAQEPREYRQVRRYPGDWHFLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYLS-LPMPGDRPVEEDTVVDGVVLWLVARTGSRKTFVVWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLHRIAPIFFITGKDKYQFLVVHHLTEVSRYSRNGMRVVSELFSVSLAPDTFARIGLDERQEVSNRLYKTLTKRILSSTIEKLAPIAQLREVAIFDFESHFIEKPRTERDRCRKLAVKRAPAVRAAMDCLRESPAFEGDDGNDKVVALGARVFPPVKWQEILDSPAKYRTQ-KQC 322          
BLAST of mRNA_Ecto-sp13_S_contig7759.18993.1 vs. uniprot
Match: A0A6H5JT11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT11_9PHAE)

HSP 1 Score: 492 bits (1266), Expect = 6.250e-160
Identity = 294/529 (55.58%), Postives = 311/529 (58.79%), Query Frame = 1
Query:  277 MKVAIQRIQGIWRGAPAGKAGAPFILGGDEETYKHMYHVMAQEPREYRQARRYPGDWHLLLHMAKAMLRRNWGAGVEFVAKDLGIDGSKSGEGSKYRRAHHHITAF----WAAFMALCREEYLKGFPTPGDRPVEDYKVVDGVVRWIVAREDFRSVEAVPPPRLPCVIAFGTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDMRV--ASQLFSV-----------SLGPDTFAR-------------------------------------------------------IGLD-----------------------------------ERQEVSNRPYRTLTKRILSSTIEKLAPIAQLRKVAIFDFESLFIEKPRTERDPCRELAVKRAPAVRAAMKCLRDSTAFKGDDGKDKVVALDGSVLPPVEWQEILDAAAKGRAKMRECILYYIFKKKTLEGATKKKAFFILATNSTTTATKIQGRSSALKDSVGNAYAGSQEWKGLTLNMFDAAK 1542
            MK A QRIQGIWRG PAGKAGAPFIL GDEET+KHMYHVMAQEPREYRQ  RYPGDWHLLLHMAKAMLRR WGAGVEFVAK+LG DGSKSGEGS YRRAHHHITAF    W  F+                  + DY                           P  IAF TALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHL EVSRYSRNDMRV  + +L++             L P    R                                                       + LD                                   ERQEVS+R Y TLTKRILSS IEKLAPIAQLR+VA+FDFES  IEKPRTERD CRELAVKRAPAVRAAM CLR+S AFKGDDGKDKVVALDG V PPV+WQEILDAAAK RAKMREC+L                         T  ATK QGRSSA+KDSVGNAYAGSQEWK LTLNM DAA+
Sbjct:    1 MKAATQRIQGIWRGTPAGKAGAPFILDGDEETFKHMYHVMAQEPREYRQVHRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKELGTDGSKSGEGSNYRRAHHHITAFGRRLWLCFL------------------LHDY---------------------------PAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLMEVSRYSRNDMRVEVSDRLYNTLTKRILSSMIEKLAPIAQLREVAVFDFESHLIEKPRTERDRCRELAVKRAPAVRAAMDCLRESPAFKGDDGKDKVVALDGRVFPPVKWQEILDAAAKARAKMRECVLLTRPWEAERQEVSDRLYNTLTKRILSSMIEKLAPIAQLREVAVFDFESHLIEKPRTERDRCRELAVKRAPAVRAAMDCLRESPAFKGDDGKDKVVALDGRVFPPVKWQEILDAAAKARAKMRECVL-------------------------TNKATKSQGRSSAMKDSVGNAYAGSQEWKALTLNMTDAAR 459          
BLAST of mRNA_Ecto-sp13_S_contig7759.18993.1 vs. uniprot
Match: A0A6H5JXE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXE3_9PHAE)

HSP 1 Score: 457 bits (1177), Expect = 1.870e-156
Identity = 239/293 (81.57%), Postives = 250/293 (85.32%), Query Frame = 1
Query:  382 MYHVMAQEPREYRQARRYPGDWHLLLHMAKAMLRRNWGAGVEFVAKDLGIDGSKSGEGSKYRRAHHHITAFWAAFMALCREEYLKGFPTPGDRPVEDYKVVDGVVRWIVAREDFRSVEAVPPPRL----PCVIAFGTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDMRVASQLFSVSLGPDTFARIGLDERQEVSNRPYRTLTKRILSSTIEKLAPIAQLRKVAIFDFESLFIEKPRTERDPCRELAVKRAPAVRAAMKCLRDSTAFKGDDGKDK 1248
            MYHVMAQE  EYRQ RRYPGDWHLLLHMAKAML R WGAGVEFVAKDLGID SKSGEGS YRRA HHIT F AAFMALCR+EYLK   TPGDRPVE+ KVVDGVVRWIVAR +     AV    L    P  IAF TALRTGNFRLRLEGLRRIAP+F ITGKDKY FLVVDHLTEVSRYSRNDMRV S+LFSVSLGPDTFARIGLDERQ VSNR Y+TLTKRILSSTIEKLAPIAQLR+V IFDFES FIEKPRT+RD CRELAVKRAPAVRAAM CLR+S A +GDDGK +
Sbjct:    1 MYHVMAQESSEYRQVRRYPGDWHLLLHMAKAMLTRYWGAGVEFVAKDLGIDESKSGEGSNYRRAFHHITWFLAAFMALCRQEYLKSLQTPGDRPVEEDKVVDGVVRWIVARAESHKTFAVWKQFLLHDYPAYIAFPTALRTGNFRLRLEGLRRIAPVFSITGKDKYHFLVVDHLTEVSRYSRNDMRVVSELFSVSLGPDTFARIGLDERQ-VSNRLYKTLTKRILSSTIEKLAPIAQLREVDIFDFESYFIEKPRTDRDRCRELAVKRAPAVRAAMDCLRESPACEGDDGKTR 292          
BLAST of mRNA_Ecto-sp13_S_contig7759.18993.1 vs. uniprot
Match: A0A6H5L1K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1K3_9PHAE)

HSP 1 Score: 465 bits (1196), Expect = 1.490e-149
Identity = 246/303 (81.19%), Postives = 253/303 (83.50%), Query Frame = 1
Query:  277 MKVAIQRIQGIWRGAPAGKAGAPFILGGDEETYKHMYHVMAQEPREYRQARRYPGDWHLLLHMAKAMLRRNWGAGVEFVAKDLGIDGSKSGEGSKYRRAHHHITAFWAAFMALCREEYLKGFPTPGDRPVEDYKVVDGVVRWIVAREDFRSVEAVPPPRL----PCVIAFGTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLV---VDHLTEVSRYSRNDMRVASQLFSVSLGPDTFARIGLDERQEVSNRPYRTLTKRILSSTIEKLAPIAQLRKVAIFDFESLFIEKPRTERDPCRELA 1164
            MK A QR+Q IW G+ AGKA APFILGGDEETYKHMYHVMAQEPREYRQ RRYPGDWHLLLHMAKAMLRR WGAGVEFVAKDLG DGSKSGEGS YRRAHHHITAFWAAFMAL               PVE+ KVVDGVVRWIVAR +     AV    L    P  IAF TALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLV   VDHLTEVSRYSRNDMRV S+LFSVSLGPDTFARIGLDERQEVSNR Y+TLTKRILSSTIEKLAPIAQLR+VAIFDFES FIEKPRTERD CRELA
Sbjct:    1 MKGATQRVQVIWCGSLAGKAAAPFILGGDEETYKHMYHVMAQEPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMAL---------------PVEEDKVVDGVVRWIVARAESHKAFAVWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVFLVVDHLTEVSRYSRNDMRVVSELFSVSLGPDTFARIGLDERQEVSNRLYKTLTKRILSSTIEKLAPIAQLREVAIFDFESHFIEKPRTERDRCRELA 288          
BLAST of mRNA_Ecto-sp13_S_contig7759.18993.1 vs. uniprot
Match: A0A6H5JK56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK56_9PHAE)

HSP 1 Score: 463 bits (1192), Expect = 5.440e-149
Identity = 243/329 (73.86%), Postives = 271/329 (82.37%), Query Frame = 1
Query:  523 LGIDGSKSGEGSKYRRAHHHITAFWAAFMALCREEYLKGFPTPGDRPVEDYKVVDGVVRWIVAREDFRSVEAVPPPRL----PCVIAFGTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDMRVASQLFSVSLGPDTFARIGLDERQEVSNRPYRTLTKRILSSTIEKLAPIAQLRKVAIFDFESLFIEKPRTERDPCRELAVKRAPAVRAAMKCLRDSTAFKGDDGKDKVVALDGSVLPPVEWQEILDAAAKGRAKMRECILYYIFKKKTLEGATKKKAFFILATNSTTTATKIQGRSSALKDSVGNAYAGS 1497
            LG D SKSG+GS YRRAHHHITAFW+AFMALCREE LKG PT GDRPVED +VVDGV+ WI AR +     AV    L    P  IA  TALRTGNFRLRL+ LRRIAP F ITGKDKYQFLV+DHLTEVSRYSRNDMRV S+L SVSLGPDT ARIG DERQEV+NR Y+TLTKR+LSSTIEKLAPIAQLR+VA+ DFES F+EKPRTERD CREL+VKRAPAVRAA+ C R+S+AFKGDDG  KVVALDG V PPV+WQEIL++  K  A++REC+LYY+FKKK L+GATKKK F I A NST  ATK  GRSSA KD+VGNA+AGS
Sbjct:   35 LGKDDSKSGKGSNYRRAHHHITAFWSAFMALCREECLKGSPTRGDRPVEDDEVVDGVIWWIAARVEAHKTFAVWKQFLLHDYPAYIASRTALRTGNFRLRLDALRRIAPNFCITGKDKYQFLVIDHLTEVSRYSRNDMRVVSELSSVSLGPDTIARIGSDERQEVANRLYKTLTKRVLSSTIEKLAPIAQLRQVAMLDFESHFVEKPRTERDRCRELSVKRAPAVRAAIDCSRESSAFKGDDGIIKVVALDGRVFPPVKWQEILNSGDKAAAQLRECVLYYVFKKKDLKGATKKKIFSIPARNSTNKATKNHGRSSARKDTVGNAHAGS 363          
BLAST of mRNA_Ecto-sp13_S_contig7759.18993.1 vs. uniprot
Match: A0A6H5K3J0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J0_9PHAE)

HSP 1 Score: 440 bits (1131), Expect = 1.650e-145
Identity = 263/517 (50.87%), Postives = 321/517 (62.09%), Query Frame = 1
Query:    1 MDDWCLVRSRGSLTVEDVILERDQEDGARRY----NELSAKLCRGVFTEARNNSDRSAADTCAESELRKAITPEGKTPQQLRYAFIQKGSTKRLSDMKVAIQRIQGIWRGAPAGKAGAPFILGGDEETYKHMYHVMAQEPREYRQARRYPGDWHLLLHMAKAMLRRNWGAGVEFVAKDLGIDGSKSGEGSKYRRAHHHITAFWAAFMALCREEYLKGFPTPGDRPVEDYKVVDGVVRWIVAREDFRSVEAVPPPRL----PCVIAFGTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDMRVASQLFSVSLGPDTFARIGLDERQEVSNRPYRTLTKRILSSTIEKLAPIAQLRKVAIFDFESLFIEKPRTERDPCRELAVKRAPAVRAAMKCLRDSTAFKGDDGKDKVVALDGSVLPPVEWQEILDAAAKGRAKMRECILYYIFKKKTLEGATKKKAFFILATNSTTTATKIQGRSSALKDSVGNAYAGSQEWKGLTLNM 1527
            ++D   ++    LT++DV+   + + G RR+    ++L+A  CR      R ++ R AA  C  S      TP G       Y           S    A+ RI  IWRG  AGK GAP I+ GDEETY+ +YH+  QE   YRQ RRYPGDWHLLLHMAKA+L+R WGAGVEFVAKDLG D SKS EGS YRRAHHH+   W A M+LC +  L   P   D   ED   +  VV WI  R       A+    L    P  +AF TALRTG+F LRL+ LRRIAPIF+ITGKD+YQFLVVD L E+SR S +D++V  +LFSVSL  D  AR+GLDERQ ++NR Y+TLTKRIL S I KLAP A LR++A F+F   F+E PRTERD CRELA+ RAPA               GD GK KVVALDG V P   WQE+L A A    KMRE ILY++ K KT +GATKKK F I A N+   +T+ +GRSS LKD+VGNAYAG +  K + LN+
Sbjct:  100 LEDASRLKRYSLLTLDDVMKGPNAQGGERRFEAFQSQLTAPTCRLRERVVRFDTGR-AAVVCGGS------TPNGSNAGGESY-----------SRRPAAVDRILRIWRGTVAGKNGAPCIIAGDEETYRVLYHIQKQERMAYRQLRRYPGDWHLLLHMAKALLKRYWGAGVEFVAKDLGTDNSKSSEGSNYRRAHHHLVVMWEARMSLCPKMCL---PPGEDMTAEDADSM--VVAWIKKRAAEHKTFALWQQFLLHDFPAYMAFRTALRTGDFMLRLDALRRIAPIFYITGKDRYQFLVVD-LAEMSRMSESDLKVIVKLFSVSLSKDACARLGLDERQGLTNRMYKTLTKRILPSFIHKLAPTAVLREIAEFEFRREFLEGPRTERDRCRELALLRAPA---------------GDLGKGKVVALDGRVFPEARWQEVLGAPATASEKMREFILYFVKKDKTKKGATKKKFFSIPALNTENKSTRSKGRSSKLKDTVGNAYAGGRAMKAMVLNI 577          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7759.18993.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6D9_9PHAE1.790e-28982.55Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7FIA9_ECTSI1.370e-28182.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYE1_9PHAE3.220e-23378.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JND3_9PHAE1.690e-17862.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JA33_9PHAE1.420e-17580.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT11_9PHAE6.250e-16055.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXE3_9PHAE1.870e-15681.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L1K3_9PHAE1.490e-14981.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JK56_9PHAE5.440e-14973.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3J0_9PHAE1.650e-14550.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7759contigEcto-sp13_S_contig7759:4830..6611 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score794.7
Seed ortholog evalue2.8e-227
Seed eggNOG ortholog2880.D7FIA9
Model size1641
Hectar predicted targeting categoryother localisation
Exons2
EggNOG OGs2D5KK@1,2SYVY@2759
Cds size1641
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464045.8127964-CDS-Ecto-sp13_S_contig7759:4829..50241681464045.8127964-CDS-Ecto-sp13_S_contig7759:4829..5024Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7759 4830..5024 +
1681464045.8257887-CDS-Ecto-sp13_S_contig7759:5165..66111681464045.8257887-CDS-Ecto-sp13_S_contig7759:5165..6611Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7759 5166..6611 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7759.18993.1prot_Ecto-sp13_S_contig7759.18993.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7759 4830..6611 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7759.18993.1

>prot_Ecto-sp13_S_contig7759.18993.1 ID=prot_Ecto-sp13_S_contig7759.18993.1|Name=mRNA_Ecto-sp13_S_contig7759.18993.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=547bp
MDDWCLVRSRGSLTVEDVILERDQEDGARRYNELSAKLCRGVFTEARNNS
DRSAADTCAESELRKAITPEGKTPQQLRYAFIQKGSTKRLSDMKVAIQRI
QGIWRGAPAGKAGAPFILGGDEETYKHMYHVMAQEPREYRQARRYPGDWH
LLLHMAKAMLRRNWGAGVEFVAKDLGIDGSKSGEGSKYRRAHHHITAFWA
AFMALCREEYLKGFPTPGDRPVEDYKVVDGVVRWIVAREDFRSVEAVPPP
RLPCVIAFGTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEV
SRYSRNDMRVASQLFSVSLGPDTFARIGLDERQEVSNRPYRTLTKRILSS
TIEKLAPIAQLRKVAIFDFESLFIEKPRTERDPCRELAVKRAPAVRAAMK
CLRDSTAFKGDDGKDKVVALDGSVLPPVEWQEILDAAAKGRAKMRECILY
YIFKKKTLEGATKKKAFFILATNSTTTATKIQGRSSALKDSVGNAYAGSQ
EWKGLTLNMFDAAKEGGGVVTQGPDAGNGGVHRSGHAVQHGERDGR*
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mRNA from alignment at Ecto-sp13_S_contig7759:4830..6611+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7759.18993.1 ID=mRNA_Ecto-sp13_S_contig7759.18993.1|Name=mRNA_Ecto-sp13_S_contig7759.18993.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1782bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7759:4830..6611+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGACGACTGGTGCTTGGTAAGGAGCCGGGGATCTCTTACTGTGGAGGA CGTCATTCTGGAGCGGGACCAGGAGGACGGAGCACGGCGGTACAACGAGT TGTCGGCGAAACTCTGCCGCGGCGTATTCACTGAGGCGCGGAACAACTCC GACAGGTCTGCGGCAGACACATGCGCCGAGTCTGAACTCCGCAAGGTAAG AGGCATTTTTTTTTACTTCCCTCGCTTTCCAGTTTTTCCACGACCTGGCC AACCCGACTGAACGTATATTGCCAAATGATATATGGCGTTCGTCGATTCT GAGTCGCGCCGTCCGCACTATTCCTCGAACGCGTAGGCCATCACACCCGA GGGGAAAACGCCGCAGCAATTGCGATACGCGTTCATCCAGAAGGGTTCCA CCAAGCGTCTCAGCGATATGAAGGTAGCCATCCAGCGCATACAAGGTATC TGGCGTGGGGCCCCAGCCGGAAAGGCTGGTGCACCGTTCATCCTCGGTGG GGACGAGGAGACATACAAGCACATGTACCACGTCATGGCACAGGAGCCGC GCGAGTACCGACAAGCCCGTCGCTACCCCGGCGATTGGCATTTGCTGTTG CATATGGCCAAGGCGATGCTTAGGCGGAACTGGGGTGCTGGAGTGGAGTT CGTGGCGAAGGATTTGGGCATAGATGGGTCGAAGTCGGGGGAGGGGAGCA AATATCGTCGGGCACACCACCACATAACGGCGTTTTGGGCGGCGTTTATG GCTCTGTGTCGCGAGGAATACTTGAAGGGTTTCCCGACGCCAGGTGACAG ACCGGTGGAAGATTACAAGGTGGTCGACGGGGTGGTTCGGTGGATAGTGG CACGGGAAGACTTTCGCAGTGTGGAAGCAGTTCCTCCTCCACGACTACCC TGCGTTATCGCCTTTGGAACTGCCCTGCGTACGGGGAACTTCAGGCTGAG GCTTGAAGGCCTTCGCCGTATCGCCCCCATTTTTTTCATCACCGGCAAAG ATAAGTACCAGTTCCTCGTCGTAGATCATCTGACGGAGGTGTCGCGTTAT TCGCGCAATGATATGAGGGTCGCATCCCAGCTATTCTCCGTCTCACTCGG CCCTGACACTTTTGCGCGAATCGGCTTGGACGAGCGGCAGGAGGTGTCCA ATCGTCCCTACAGGACGTTGACGAAAAGGATCCTTTCGAGCACGATAGAA AAGCTGGCACCGATTGCCCAGCTACGTAAAGTCGCCATCTTCGACTTCGA ATCGCTTTTCATCGAGAAACCACGCACGGAAAGGGACCCTTGCAGAGAGT TGGCGGTGAAGCGTGCGCCAGCAGTCAGGGCAGCGATGAAGTGCTTGAGA GATAGCACGGCATTTAAAGGCGACGATGGCAAAGACAAGGTCGTGGCGTT GGACGGAAGCGTGCTTCCGCCGGTCGAATGGCAAGAGATTCTCGACGCGG CCGCCAAGGGTCGTGCGAAAATGCGCGAGTGTATCCTGTACTACATCTTC AAGAAGAAAACACTAGAGGGCGCGACCAAGAAGAAAGCGTTCTTCATCCT GGCTACGAACAGCACCACCACGGCCACGAAGATTCAAGGGAGATCGTCTG CACTGAAGGATTCCGTTGGCAATGCCTACGCTGGGAGCCAAGAGTGGAAG GGCCTCACGCTGAACATGTTTGATGCGGCCAAAGAAGGTGGGGGTGTGGT GACACAAGGACCAGATGCTGGAAATGGTGGCGTCCATAGGAGCGGCCACG CCGTACAGCATGGCGAACGCGACGGGAGGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7759:4830..6611+

>mRNA_Ecto-sp13_S_contig7759.18993.1 ID=mRNA_Ecto-sp13_S_contig7759.18993.1|Name=mRNA_Ecto-sp13_S_contig7759.18993.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1641bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7759:4830..6611+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGACGACTGGTGCTTGGTAAGGAGCCGGGGATCTCTTACTGTGGAGGA
CGTCATTCTGGAGCGGGACCAGGAGGACGGAGCACGGCGGTACAACGAGT
TGTCGGCGAAACTCTGCCGCGGCGTATTCACTGAGGCGCGGAACAACTCC
GACAGGTCTGCGGCAGACACATGCGCCGAGTCTGAACTCCGCAAGGCCAT
CACACCCGAGGGGAAAACGCCGCAGCAATTGCGATACGCGTTCATCCAGA
AGGGTTCCACCAAGCGTCTCAGCGATATGAAGGTAGCCATCCAGCGCATA
CAAGGTATCTGGCGTGGGGCCCCAGCCGGAAAGGCTGGTGCACCGTTCAT
CCTCGGTGGGGACGAGGAGACATACAAGCACATGTACCACGTCATGGCAC
AGGAGCCGCGCGAGTACCGACAAGCCCGTCGCTACCCCGGCGATTGGCAT
TTGCTGTTGCATATGGCCAAGGCGATGCTTAGGCGGAACTGGGGTGCTGG
AGTGGAGTTCGTGGCGAAGGATTTGGGCATAGATGGGTCGAAGTCGGGGG
AGGGGAGCAAATATCGTCGGGCACACCACCACATAACGGCGTTTTGGGCG
GCGTTTATGGCTCTGTGTCGCGAGGAATACTTGAAGGGTTTCCCGACGCC
AGGTGACAGACCGGTGGAAGATTACAAGGTGGTCGACGGGGTGGTTCGGT
GGATAGTGGCACGGGAAGACTTTCGCAGTGTGGAAGCAGTTCCTCCTCCA
CGACTACCCTGCGTTATCGCCTTTGGAACTGCCCTGCGTACGGGGAACTT
CAGGCTGAGGCTTGAAGGCCTTCGCCGTATCGCCCCCATTTTTTTCATCA
CCGGCAAAGATAAGTACCAGTTCCTCGTCGTAGATCATCTGACGGAGGTG
TCGCGTTATTCGCGCAATGATATGAGGGTCGCATCCCAGCTATTCTCCGT
CTCACTCGGCCCTGACACTTTTGCGCGAATCGGCTTGGACGAGCGGCAGG
AGGTGTCCAATCGTCCCTACAGGACGTTGACGAAAAGGATCCTTTCGAGC
ACGATAGAAAAGCTGGCACCGATTGCCCAGCTACGTAAAGTCGCCATCTT
CGACTTCGAATCGCTTTTCATCGAGAAACCACGCACGGAAAGGGACCCTT
GCAGAGAGTTGGCGGTGAAGCGTGCGCCAGCAGTCAGGGCAGCGATGAAG
TGCTTGAGAGATAGCACGGCATTTAAAGGCGACGATGGCAAAGACAAGGT
CGTGGCGTTGGACGGAAGCGTGCTTCCGCCGGTCGAATGGCAAGAGATTC
TCGACGCGGCCGCCAAGGGTCGTGCGAAAATGCGCGAGTGTATCCTGTAC
TACATCTTCAAGAAGAAAACACTAGAGGGCGCGACCAAGAAGAAAGCGTT
CTTCATCCTGGCTACGAACAGCACCACCACGGCCACGAAGATTCAAGGGA
GATCGTCTGCACTGAAGGATTCCGTTGGCAATGCCTACGCTGGGAGCCAA
GAGTGGAAGGGCCTCACGCTGAACATGTTTGATGCGGCCAAAGAAGGTGG
GGGTGTGGTGACACAAGGACCAGATGCTGGAAATGGTGGCGTCCATAGGA
GCGGCCACGCCGTACAGCATGGCGAACGCGACGGGAGGTGA
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