mRNA_Ecto-sp13_S_contig7757.18989.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7757.18989.1 vs. uniprot
Match: D8LCR9_ECTSI (NF-X1 finger and helicase domain protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCR9_ECTSI) HSP 1 Score: 661 bits (1705), Expect = 2.160e-215 Identity = 333/368 (90.49%), Postives = 339/368 (92.12%), Query Frame = 1
Query: 1 RRCHPDDPHHLGVRCSEPCPRLLQPCEHPXQRLCGDECGPCYQRVDVVGLPCGHEAKNMLCP-TLLVRVRSIDRCGEPVELKVPGCGHEIKGRCTATRDIVRNPAKCTETCGKPLPCGHSCMATCGSCTQLTLSFVLAAAVATAAEQRTHHXXXXXXXXXXXXXXXXXXLPCHEGEPCPPCPEPCTLSCEHSSCAQACIXXXXLCAQSCTWHCPHQAGSCRLPCGAPCVRLPCDIRCERKLPCGHRCPSVCGEDCPGSEFCRECGRADTPAMTQVVDMLEFTTLKDHDPSIDPIIVLGCGHAYTLTTLDGLLGLKSAYAKDETSGRWVAPLPLESDCSKLKLCPDCRAPVSGVSRYNRVTNKAKARRW 1101
RRCHPDDPHHLGVRCSEPCPRLLQPCEH X LCGDECGPCYQRVDVVGLPCGHE MLCP TL+V VRSIDRCGEPVELKVPGCGHEIKGRCTATRDIVRNPA C+ETCGKPLPCGHSC ATCGSCTQLTLS QRTHH XXXXXXXXXXXXXXXXLPCHEGEPCPPCPEPCTLSCEHSSCAQACIXXXXLCAQSCTWHCPHQAGSCRLPCGAPC+RLPCDIRCERKL CGH+CPSVCGEDCPGSEFCREC DTPAMTQVVDMLEFTTLKDHDPSIDPIIVLGCGHAYTLTTLDGLLGL+SAYAKDE SG+WVAPLPLESDCSKLKLCPDCRAPVSGVSRYNRVTNKAKARRW
Sbjct: 1692 RRCHPDDPHHLGVRCSEPCPRLLQPCEHXXXXLCGDECGPCYQRVDVVGLPCGHE---MLCPPTLVVWVRSIDRCGEPVELKVPGCGHEIKGRCTATRDIVRNPAMCSETCGKPLPCGHSCAATCGSCTQLTLS-----------RQRTHHVKXXXXXXXXXXXXXXXXLPCHEGEPCPPCPEPCTLSCEHSSCAQACIXXXXLCAQSCTWHCPHQAGSCRLPCGAPCLRLPCDIRCERKLGCGHQCPSVCGEDCPGSEFCRECCSVDTPAMTQVVDMLEFTTLKDHDPSIDPIIVLGCGHAYTLTTLDGLLGLESAYAKDEKSGKWVAPLPLESDCSKLKLCPDCRAPVSGVSRYNRVTNKAKARRW 2045
BLAST of mRNA_Ecto-sp13_S_contig7757.18989.1 vs. uniprot
Match: A0A6H5JSP5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSP5_9PHAE) HSP 1 Score: 276 bits (705), Expect = 3.330e-87 Identity = 128/134 (95.52%), Postives = 129/134 (96.27%), Query Frame = 1
Query: 700 IRCERKLPCGHRCPSVCGEDCPGSEFCRECGRADTPAMTQVVDMLEFTTLKDHDPSIDPIIVLGCGHAYTLTTLDGLLGLKSAYAKDETSGRWVAPLPLESDCSKLKLCPDCRAPVSGVSRYNRVTNKAKARRW 1101
RCERKLPCGHRCPSVCGEDCPGSEFCREC R DTPAMTQVVDMLEFTTLKDHDPSIDPIIVLGCGHAYTLTTLDGLLGL+SA AKDE SGRWVAPLPLESDCSKLKLCPDCRAPVSGVSRYNRVTNKAKARRW
Sbjct: 29 FRCERKLPCGHRCPSVCGEDCPGSEFCRECARVDTPAMTQVVDMLEFTTLKDHDPSIDPIIVLGCGHAYTLTTLDGLLGLESACAKDEKSGRWVAPLPLESDCSKLKLCPDCRAPVSGVSRYNRVTNKAKARRW 162
BLAST of mRNA_Ecto-sp13_S_contig7757.18989.1 vs. uniprot
Match: A0A388L1F4_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388L1F4_CHABU) HSP 1 Score: 280 bits (717), Expect = 1.450e-78 Identity = 162/395 (41.01%), Postives = 214/395 (54.18%), Query Frame = 1
Query: 1 RRCHPDDPHHLGVRCSEPCPRLLQPCE----HPXQRLCGDECGPCYQRVDVVGLPCGHEAKNMLCPTLLVRVRSIDRCGEP--VELKVPGCGHEIKGRCTATRDIVRNPAKCTETCGKPLPCGHSCMATCGSCTQLTLSFVLAA------------------AVATAAE--QRTHHXXXXXXXXXXXXXXXXXXLPCH------EGE-PCPPCPEPCTLSCEHSSCAQACIXXXXLCAQSCTWHCPHQAGSCRLPCGAPCVRLPCDIRCERKLPCGHRCPSVCGEDCPGSEFCRECGRADTPAMTQVVDMLEFTTLKDHDPSIDPIIVLGCGHAYTLTTLDGLLGLKSAYAKDETSGRWVAPLPLESDCSKLKLCPDCRAPVSGVSRYNRVTNKA 1086
RRCHPD+ +H+G RC +PCPRL E HP +++CG+ CGPC V + LPCGH A+ + C L +D+ VE+ + CGH +K +C P C E C PLPCGH C A CG C LTL LAA V T E +RT + PC +G+ C PC + C + C HS C+ C XXXX G+C++PC APC RLPCD RC++ L CGHRCPS+CGE CP +C C A QVVD++ FTTL+DHDPS DP+IVL C HA+T+++LDG L ++AYA+ G+WV PL+ + ++LK CP+CRAP++ + RY R+TNKA
Sbjct: 1540 RRCHPDNRNHVGTRCLKPCPRLRPASECKHQHPCRKVCGEVCGPCEVPVGPLVLPCGHTAREVPCWKTL----KLDQVXXXXMVEVGMILCGHILKVQCWQREWTRARPLLCPEKCKMPLPCGHDCAAGCGKCLTLTLQQRLAAKGDSRDTNTLSEVDPRNVVVPTPYELPRRTDNDFRHCQCNSTCMRPLICGHPCESVCHATDGDRKCQPCSKTCAVRCVHSRCSLPCDXXXXXXXXXXXXXXXXGNGTCQMPCSAPCDRLPCDRRCDKPLSCGHRCPSICGESCPSKNYCSTCAPAHR--KQQVVDLIMFTTLEDHDPSDDPLIVLPCQHAFTISSLDGHLEFETAYARGP-DGKWVRARPLQQEFTRLKGCPECRAPITSIFRYGRLTNKA 1927
BLAST of mRNA_Ecto-sp13_S_contig7757.18989.1 vs. uniprot
Match: A0A2I1H2I4_9GLOM (Uncharacterized protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A2I1H2I4_9GLOM) HSP 1 Score: 275 bits (702), Expect = 1.220e-76 Identity = 165/440 (37.50%), Postives = 215/440 (48.86%), Query Frame = 1
Query: 4 RCHPDDPHHLGVRCSEPCPRLLQPCEHPXQRLCGDECGPCYQRVDVVGLP-CGHEAKNMLCPTLLVRVRSID--RCGEPVELKVPGCGHEIKGRCTATRDIVRNPAKCTETCGKPLPCGHSCMATCGSCTQLTLSFVLAAAVATAAE---------------QRTHHXXXXXXXXXXXXXXXXXXLPCHEGEPCPPCPEPCTLSCEHSSCAQACIXXXXLCAQSCTWHCPHQAGSCRLPCGAPCVRLPCDIRCERKLPCGHRCPSVCGEDCPGSEFCRECGRADTPAMTQVVDMLEFTTLKDHDPSIDPIIVLGCGHAYTLTTLDGLLGLKSAYAKDETSGRWVAPLPLESDCSKLKLCPDCRAPVSGVSRYNRVTNKAKARRWYMAEVKHSEWCRK------EIGLAHTDL---VVAAADGTKPKLRNNRMRQAEGTLK 1242
+CH DDP H+GVRC+EPC RL C HP +LC D CG C + + LP CGHE KN C + RS D RC V K+P C H C+ + D V KCTE CGK L CGH C+ C C L+ +RT H CHEG CPPC CT+ CEH+SC + C+ +CA+ C W C HQ G C L CGAPC RLPC+ RC++ L CGH+C VCGE CP +FC C A +QV DM+ +T + D ++ +IVL CGH YT+ T+D + +K Y + G W + L + +K CP CRAP+ V RY R+ NK Y ++++ ++ K EI + T L +V G K L + RQ E LK
Sbjct: 831 KCHSDDPEHIGVRCNEPCIRLHPECSHPCPKLCSDYCGKCEFLIGDIILPGCGHEIKNAKC----WQDRSKDSLRCTILVSKKLPYCEHYQDTYCSDSVDNV----KCTEKCGKQLECGHECLNECYKCQDLSKPHXXXXXXXXXXXXXXXXXXXXKIIVPIERTQHGKCKIVCDRLLFCGHACKRYCHEGRECPPCKNLCTVICEHTSCRKRCLDPCAVCAEKCLWECKHQ-GRCELSCGAPCYRLPCNERCDKVLKCGHKCAGVCGEICPSKDFCVNC--APEKVKSQVPDMIINSTFSEVDWEVERMIVLTCGHVYTMETMDMHMEMKDYY-EGSIEGGWTSIKILPTSPMNMKTCPTCRAPIKNVRRYGRIINK------YTLDIQNKKFLTKYYSQLKEISNSITFLKNKLVNKRKGLKNALPKHEFRQTEVVLK 1252
BLAST of mRNA_Ecto-sp13_S_contig7757.18989.1 vs. uniprot
Match: A0A2P4PK82_RHIID (Uncharacterized protein n=2 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) TaxID=747089 RepID=A0A2P4PK82_RHIID) HSP 1 Score: 265 bits (677), Expect = 2.480e-73 Identity = 163/436 (37.39%), Postives = 210/436 (48.17%), Query Frame = 1
Query: 4 RCHPDDPHHLGVRCSEPCPRLLQPCEHPXQRLCGDECGPCYQRVDVVGLP-CGHEAKNMLCPTLLVRVRSID--RCGEPVELKVPGCGHEIKGRCTATRDIVRNPAKCTETCGKPLPCGHSCMATCGSCTQLTLSFVLAAAVATAAE-----------QRTHHXXXXXXXXXXXXXXXXXXLPCHEGEPCPPCPEPCTLSCEHSSCAQACIXXXXLCAQSCTWHCPHQAGSCRLPCGAPCVRLPCDIRCERKLPCGHRCPSVCGEDCPGSEFCRECGRADTPAMTQVVDMLEFTTLKDHDPSIDPIIVLGCGHAYTLTTLDGLLGLKSAYAKDETSGRWVAPLPLESDCSKLKLCPDCRAPVSGVSRYNRVTNKAKARRWYMAEVKHSEWCRK------EIGLAHTDL---VVAAADGTKPKLRNNRMRQAEGTLK 1242
+CH DDP H+GVRC+EPC RL C HP +LC D CG C + + LP CGHE KN C + RS D RC V K+P C H C+ + D V KCTE C K L CGH C L+ +RT H L CHEG CPPC CT+ CEH+SC + C+ +CA+ C W C HQ G C L CGAPC RLPC+ RC + L CGH+C VCGE CP +FC C A QV DM+ +T + D + +IVL CGH YT+ T+D + +K Y + G W + L + +K CP CRAP+ GV RY R+ NK Y ++++ ++ K E+ + T L +V G K L + RQ E LK
Sbjct: 845 KCHSDDPEHIGVRCNEPCIRLHPECSHPCPKLCSDYCGKCEFLIGDIILPGCGHEIKNAKC----WQDRSKDSLRCTILVSKKLPYCEHYQDTYCSDSVDNV----KCTEKCRKQLECGHXXXXXXXKCQDLSKPHXXXXXXXXXXXXXXXXKIIVPIERTQHGKCKIVCDRLLFCGHACKLYCHEGRECPPCKNLCTVICEHTSCHKHCLDPCAVCAEKCLWECKHQ-GRCELSCGAPCYRLPCNERCNKVLECGHKCAGVCGEICPSKDFCVNC--APEKVKNQVSDMIINSTFSEVDWEQERMIVLTCGHVYTMETMDMHMEMKDYY-EGSIEGGWTSIKILPTSPMNMKTCPTCRAPIKGVRRYGRIINK------YTLDIQNKKFLSKYDRLLKEVANSITFLKNKLVNKRKGLKNALPKHEFRQTEVVLK 1262
BLAST of mRNA_Ecto-sp13_S_contig7757.18989.1 vs. uniprot
Match: A0A2H4SDB6_CORMI (NFX1-type zinc finger-containing n=1 Tax=Cordyceps militaris TaxID=73501 RepID=A0A2H4SDB6_CORMI) HSP 1 Score: 262 bits (669), Expect = 3.020e-72 Identity = 143/366 (39.07%), Postives = 185/366 (50.55%), Query Frame = 1
Query: 4 RCHPDDPHHLGVRCSEPCPRLLQPCEHPXQR-LCGDECGPCYQRVDVVGLPCGHEAKNMLCPTLLVRVRSIDRCGEPVELKVPGCGHEIKGRCTATRDIVRNPAKCTETCGKPLPCGHSCMATCGSCTQLTLSFVLAAAVATAAEQRTHHXXXXXXXXXXXXXXXXXXLPCHEGEPCPPCPEPCTLSCEHSSCAQACIXXXXLCAQSCTWHCPHQAGSCRLPCGAPCVRLPCDIRCERKLPCGHRCPSVCGEDCPGSEFCRECGRADTPAMTQVVDMLEFTTLKDHDPSIDPIIVLGCGHAYTLTTLDGLLGLKSAYAKDETSGRWVAPLPLESDCSKLKLCPDCRAPVS--GVSRYNRVTNKAKA 1092
RCH + H++ C +PC RL +PC H Q+ CG++CG C ++ V LPCGHE + C + SI RC VE C H + C + + +C C LPCGH C TCGSC E+ H CH G C C PC + C+HS+CA C C + C W C HQ GSC +PC A C RLPC+ RC LPCGHRCP +CGEDCP C++CG++ VD+LE T D D +DPI+VLGCGH +T TLDGL+G+ +AYA D GR+ + L + +K CPDC+ PV RYNR+ N+A A
Sbjct: 1270 RCHSESMHNI-FSCPQPCQRLHEPCGHGCQKPTCGEDCGECLVPLNDVKLPCGHEKDTVACHEAQ-NLESI-RCNVIVEKISLKCNHTVNVACFES--VTAEGYQCPVPCSTSLPCGHICPGTCGSCR---------VKADDETEKMVHQKCQTICERPFGTCNHHCRKKCHVGTECGLCVAPCEVRCQHSACAATCSEGCTPCVEKCEWSCEHQ-GSCAMPCSATCTRLPCNERCAELLPCGHRCPGICGEDCP-ENLCKDCGKS----QDSRVDLLEMKTYADIDVDVDPIVVLGCGHFFTAETLDGLVGMSTAYASDR-EGRFTGLVELSGEFAKTPRCPDCKRPVRQYATRRYNRIVNRAVA 1614
BLAST of mRNA_Ecto-sp13_S_contig7757.18989.1 vs. uniprot
Match: A0A162MBN1_CORFA (NF-X1 finger and helicase domain protein n=1 Tax=Cordyceps fumosorosea (strain ARSEF 2679) TaxID=1081104 RepID=A0A162MBN1_CORFA) HSP 1 Score: 258 bits (660), Expect = 4.540e-71 Identity = 149/401 (37.16%), Postives = 196/401 (48.88%), Query Frame = 1
Query: 4 RCHPDDPHHLGVRCSEPCPRLLQPCEHPXQR-LCGDECGPCYQRVDVVGLPCGHEAKNMLCPTLLVRVRSIDRCGEPVELKVPGCGHEIKGRCTATRDIVRNPAKCTETCGKPLPCGHSCMATCGSCTQLTLSFVLAAAVATAAEQRTHHXXXXXXXXXXXXXXXXXXLPCHEGEPCPPCPEPCTLSCEHSSCAQACIXXXXLCAQSCTWHCPHQAGSCRLPCGAPCVRLPCDIRCERKLPCGHRCPSVCGEDCPGSEFCRECGRADTPAMTQVVDMLEFTTLKDHDPSIDPIIVLGCGHAYTLTTLDGLLGLKSAYAKDETSGRWVAPLPLESDCSKLKLCPDCRAPVS--GVSRYNRVTNKA----KARRWYMAEVKHSEWCRKEIGLAHTDLVVAAAD 1185
RCH + H + C +PC RL +PC H Q+ CG++CG C ++ V LPCGH + C + + RC VE VPGC H ++ C A C C PLPCGH+C TCG C + AA + +H PCH+G C C PC + C HS CA C C + C W C HQ G+C +PC APC RLPCD RC LPCGHRCPS+CGE CP C++CG A VD+LE T + D + PI+VL CGH +T TLDGL+G+ +AY GR+ A + +++ CPDC+ PV RYNR+ N+A ARR+ +A E+ +L + AD
Sbjct: 1140 RCHSESMHSI-FPCPQPCQRLHEPCGHGCQKPTCGEDCGKCLVPLNGVELPCGHFKDAVACHA--AQKPATIRCPVVVEKTVPGCNHAVEVACFQPVTEAAGYA-CPVPCTAPLPCGHTCPGTCGGCREQDRD---------AAARSSHQSCRKICMRPFGTCNHHCRRPCHDGTDCGLCVAPCEVRCPHSKCAATCSEGCVPCVEKCEWACEHQ-GACAMPCAAPCSRLPCDERCAELLPCGHRCPSLCGEACPAG-LCKDCGIAPDAR----VDLLEMKTYAEIDVDLTPIVVLACGHFFTAETLDGLVGINAAYVTSR-EGRFTALADVSGAFARMPQCPDCKRPVRQYATRRYNRIINRAVADESARRFLVAGKSELMALDGELNKLQQELAASHAD 1520
BLAST of mRNA_Ecto-sp13_S_contig7757.18989.1 vs. uniprot
Match: A0A1Y1IJP1_KLENI (NF-X1 zinc finger and helicase domain protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IJP1_KLENI) HSP 1 Score: 256 bits (653), Expect = 3.940e-70 Identity = 163/376 (43.35%), Postives = 203/376 (53.99%), Query Frame = 1
Query: 1 RRCHPDDPHHLGVRCSEPCPRLLQ----PCEHPXQRLCGDECGPCYQRVDVVGLPCGHEAKNMLCPTLLVRVRSIDRCGEPVE-LKVPGCGHEIKG-RCTATRDIVRNPAKCTETCGKPLPCGHSCMATCGSCTQLTLSFVLAAAVATAA-EQRTHHXXXXXXXXXXXXXXXXXXLPCHEGEPCPPCPEPCTLSCEHSSCAQACIXXXXLCAQSCTWHCPHQAGSCRLPCGAPCVRLPCDIRCERKLPCGHRCPSVCGEDCP-GSEFCRECGRADTPAMTQVVDMLEFTTLKDHDPSIDPIIVLGCGHAYTLTTLDGLLGLKSAYAKDETSG------RWVAPLPLESDCSKLKLCPDCRAPVSGVSRYNRVTNKA 1086
RRCH DDP H+ V C +PC RL Q P +HP RLCGDECG C+ + V LPCGH A+ + C + +ID C E V KV CGH++ C + + +P+ C C TL A A QR++H XXXXXXXXXXX CH G C PCPE C + C HS+C Q C XXX + G+C PCGAPC RLPCD RCER L CGHRCP +CGEDCP G CR+C + VVD++ T+L +HDP +P+I L CGH YT++TLDG LGL++ Y + G W+ PL +K CPDCRAP+SGV RY R++ KA
Sbjct: 1324 RRCHVDDPQHVSVHCPKPCLRLRQVTECPHQHPCPRLCGDECGLCHVSLPEVPLPCGHVARGVRC-AVAQTPEAID-CRELVAGAKVGHCGHDLPPIACAEVQKLKTDPSLCPXXXXXXXXXXXXXXXXXXXCLNRTLRNPQTPRDADAPLPQRSNHGTCKKPXXXXXXXXXXXKRLCHAGTECGPCPETCIVKCAHSACGQKCATXXXXXXXXXXXXXXXR-GACTAPCGAPCDRLPCDARCERALDCGHRCPGLCGEDCPEGRVACRDC----SVKNDHVVDLVMMTSLGEHDPEEEPLITLSCGHPYTVSTLDGHLGLETVYERSSAGGAEAERGEWLGVKPLSDMFQNVKGCPDCRAPISGVKRYGRISKKA 1692
BLAST of mRNA_Ecto-sp13_S_contig7757.18989.1 vs. uniprot
Match: A0A0A2VK74_BEABA (NFX1-type zinc finger-containing protein 1 n=2 Tax=Cordycipitaceae TaxID=474943 RepID=A0A0A2VK74_BEABA) HSP 1 Score: 254 bits (650), Expect = 9.690e-70 Identity = 141/370 (38.11%), Postives = 185/370 (50.00%), Query Frame = 1
Query: 4 RCHPDDPHHLGVRCSEPCPRLLQPCEHPXQR-LCGDECGPCYQRVDVVGLPCGHEAKNMLCPTLLVRVRSIDRCGEPVELKVPGCGHEIKGRCTATRDIVRNPAKCTETCGKPLPCGHSCMATCGSCTQLTLSFVLAAAVATAAEQRT----HHXXXXXXXXXXXXXXXXXXLPCHEGEPCPPCPEPCTLSCEHSSCAQACIXXXXLCAQSCTWHCPHQAGSCRLPCGAPCVRLPCDIRCERKLPCGHRCPSVCGEDCPGSEFCRECGRADTPAMTQVVDMLEFTTLKDHDPSIDPIIVLGCGHAYTLTTLDGLLGLKSAYAKDETSGRWVAPLPLESDCSKLKLCPDCRAPVS--GVSRYNRVTNKAKA 1092
RCH + H++ C +PC RL +PC H QR CG++CG C + V LPCGH + C + SI RC VE VP C H + C + + +C C PL CGH C TCGSC A+ T H PCH G C C PC + C+HS+CA C + C W C HQ G+C +PC A C RLPC+ RC + L CGHRCP +CGE CP + C++CG + VD+LE T + D +DPI+VLGCGH +T TLDGL+G+ +AY D GR+ + L + +K+ CPDC+ PV RYNR+ N+A A
Sbjct: 1292 RCHSESMHNI-FSCPQPCQRLHEPCGHGCQRPTCGEDCGKCLVPLRDVELPCGHVKDTVACHSAQ-NPESI-RCDVIVEKVVPDCNHNVNMACF--KSVTAEGYRCPAPCSTPLSCGHICPGTCGSCR-------------VQADDTTGKILHRKCRKICERPFGTCNHHCRKPCHAGTECGLCVAPCEVRCQHSTCAXXXSEGCTPCVEKCEWSCEHQ-GTCAMPCSATCTRLPCNERCAKLLSCGHRCPGICGEVCP-EDLCKDCGES----QDSRVDLLEMKTYTEIDVDVDPIVVLGCGHFFTAETLDGLVGMHTAYVSD-VEGRFTGLVELSGEFAKMPQCPDCKRPVRQYATRRYNRIVNRAVA 1636
BLAST of mRNA_Ecto-sp13_S_contig7757.18989.1 vs. uniprot
Match: A0A2I1F6L2_9GLOM (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A2I1F6L2_9GLOM) HSP 1 Score: 253 bits (647), Expect = 1.210e-69 Identity = 147/374 (39.30%), Postives = 184/374 (49.20%), Query Frame = 1
Query: 4 RCHPDDPHHLGVRCSEPCPRLLQPCEHPXQRLCGDECGPCYQRVDVVGLP-CGHEAKNMLCPTLLVRVRSID--RCGEPVELKVPGCGHEIKGRCTATRDIVRNPAKCTETCGKPLPCGHSCMATCGSCTQLTLSFVLAAAVATAAE-----------QRTHHXXXXXXXXXXXXXXXXXXLPCHEGEPCPPCPEPCTLSCEHSSCAQACIXXXXLCAQSCTWHCPHQAGSCRLPCGAPCVRLPCDIRCERKLPCGHRCPSVCGEDCPGSEFCRECGRADTPAMTQVVDMLEFTTLKDHDPSIDPIIVLGCGHAYTLTTLDGLLGLKSAYAKDETSGRWVAPLPLESDCSKLKLCPDCRAPVSGVSRYNRVTNK 1083
+CH DDP H+GVRC+EPC RL X CG C + + LP CGHE KN C + RS D RC V K+P C H C+ + D V KCTE CGK L CGH C+ C C L+ +RT H L CHEG CPPC CT+ CEH+SC + C+ +CA+ C W C HQ G C L CGAPC RLPC+ RC + L CGH+C VCGE CP +FC C A QV DM+ +T + D + +IVL CGH YT+ T+D + +K Y + G W + L + +K CP CRAP+ GV RY R+ NK
Sbjct: 845 KCHSDDPEHIGVRCNEPCIRLHSEXXXXXXXXXXXYCGKCEFLIGDIILPGCGHEIKNAKC----WQDRSKDSLRCTILVSKKLPYCEHYQDTYCSDSVDNV----KCTEKCGKQLECGHECLNECYKCQDLSKPHXXXXXXXXXXXXXXXXKIIVPIERTQHGKCKIVCDRLLFCGHACKLYCHEGRECPPCKNLCTVICEHTSCHKHCLDPCAVCAEKCLWECKHQ-GRCELSCGAPCYRLPCNERCNKVLECGHKCAGVCGEICPSKDFCVNC--APEKVKNQVSDMIINSTFSEVDWEQERMIVLTCGHVYTMETMDMHMEMKDYY-EGSIEGGWTSIKILPTSPMNMKTCPTCRAPIKGVRRYGRIINK 1206 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7757.18989.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7757.18989.1 >prot_Ecto-sp13_S_contig7757.18989.1 ID=prot_Ecto-sp13_S_contig7757.18989.1|Name=mRNA_Ecto-sp13_S_contig7757.18989.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=561bp RRCHPDDPHHLGVRCSEPCPRLLQPCEHPCQRLCGDECGPCYQRVDVVGLback to top mRNA from alignment at Ecto-sp13_S_contig7757:338..7279- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7757.18989.1 ID=mRNA_Ecto-sp13_S_contig7757.18989.1|Name=mRNA_Ecto-sp13_S_contig7757.18989.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6942bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7757:338..7279- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7757:338..7279- >mRNA_Ecto-sp13_S_contig7757.18989.1 ID=mRNA_Ecto-sp13_S_contig7757.18989.1|Name=mRNA_Ecto-sp13_S_contig7757.18989.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1683bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7757:338..7279- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |