mRNA_Ecto-sp13_S_contig77357.18970.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig77357.18970.1
Unique NamemRNA_Ecto-sp13_S_contig77357.18970.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig77357.18970.1 vs. uniprot
Match: D7FZ77_ECTSI (Inosine triphosphate pyrophosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ77_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 3.710e-39
Identity = 66/68 (97.06%), Postives = 68/68 (100.00%), Query Frame = 1 
Query:    4 KVQGPVMVEDTGLCFNALGGLPGPYIKWFLDGTGHDGLNGILEGFQDKTAYAQCVFAFSAGPGKEVKV 207
            +VQGPVMVEDTGLCFNALGGLPGPYIKWFLDGTGHDGLNGILEGFQDKTAYAQCVFAFSAGPGKEVK+
Sbjct:  468 QVQGPVMVEDTGLCFNALGGLPGPYIKWFLDGTGHDGLNGILEGFQDKTAYAQCVFAFSAGPGKEVKI 535
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BLAST of mRNA_Ecto-sp13_S_contig77357.18970.1 vs. uniprot
Match: A0A7R9WJQ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WJQ7_9STRA)

HSP 1 Score: 113 bits (282), Expect = 9.850e-31
Identity = 51/66 (77.27%), Postives = 56/66 (84.85%), Query Frame = 1 
Query:    4 KVQGPVMVEDTGLCFNALGGLPGPYIKWFLDGTGHDGLNGILEGFQDKTAYAQCVFAFSAGPGKEV 201
            +  GPV+VEDT LCFNAL GLPGPYIKWFLD TGHDGLN +L GF DK+AYA+ V AFSAGPGKEV
Sbjct:   62 EADGPVLVEDTSLCFNALNGLPGPYIKWFLDKTGHDGLNDMLVGFDDKSAYAETVVAFSAGPGKEV 127
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BLAST of mRNA_Ecto-sp13_S_contig77357.18970.1 vs. uniprot
Match: A0A815TPX2_9BILA (Inosine triphosphate pyrophosphatase n=3 Tax=Rotaria TaxID=231623 RepID=A0A815TPX2_9BILA)

HSP 1 Score: 113 bits (282), Expect = 5.960e-30
Identity = 49/65 (75.38%), Postives = 55/65 (84.62%), Query Frame = 1 
Query:    4 KVQGPVMVEDTGLCFNALGGLPGPYIKWFLDGTGHDGLNGILEGFQDKTAYAQCVFAFSAGPGKE 198
            K+ GPV++EDT LCFNAL GLPGPYIKWFLD  GHDGLN +L G++DKTAYAQCVFAF AGP  E
Sbjct:   55 KINGPVLIEDTSLCFNALHGLPGPYIKWFLDKLGHDGLNKLLAGYEDKTAYAQCVFAFCAGPTSE 119
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BLAST of mRNA_Ecto-sp13_S_contig77357.18970.1 vs. uniprot
Match: A0A813WZV9_9BILA (Inosine triphosphate pyrophosphatase n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A813WZV9_9BILA)

HSP 1 Score: 113 bits (282), Expect = 6.110e-30
Identity = 49/66 (74.24%), Postives = 54/66 (81.82%), Query Frame = 1 
Query:    1 MKVQGPVMVEDTGLCFNALGGLPGPYIKWFLDGTGHDGLNGILEGFQDKTAYAQCVFAFSAGPGKE 198
            +K+ GPV+VEDT LCFNAL GLPGPYIKWFLD  GHDGLN +L  + DKTAYAQCVFAF AGP  E
Sbjct:   58 IKINGPVLVEDTSLCFNALNGLPGPYIKWFLDKIGHDGLNNLLSAYTDKTAYAQCVFAFCAGPNSE 123
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BLAST of mRNA_Ecto-sp13_S_contig77357.18970.1 vs. uniprot
Match: A0A816E7G0_ADIRI (Inosine triphosphate pyrophosphatase n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A816E7G0_ADIRI)

HSP 1 Score: 112 bits (280), Expect = 1.190e-29
Identity = 48/65 (73.85%), Postives = 55/65 (84.62%), Query Frame = 1 
Query:    4 KVQGPVMVEDTGLCFNALGGLPGPYIKWFLDGTGHDGLNGILEGFQDKTAYAQCVFAFSAGPGKE 198
            ++ GPV++EDT LCFNAL GLPGPYIKWFLD  GHDGLN +L G++DKTAYAQCVFAF AGP  E
Sbjct:   55 RINGPVLIEDTSLCFNALHGLPGPYIKWFLDKLGHDGLNKLLAGYEDKTAYAQCVFAFCAGPDSE 119
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BLAST of mRNA_Ecto-sp13_S_contig77357.18970.1 vs. uniprot
Match: A0A7S3AYV9_9EUKA (Inosine triphosphate pyrophosphatase n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AYV9_9EUKA)

HSP 1 Score: 113 bits (282), Expect = 1.470e-29
Identity = 49/66 (74.24%), Postives = 56/66 (84.85%), Query Frame = 1 
Query:    4 KVQGPVMVEDTGLCFNALGGLPGPYIKWFLDGTGHDGLNGILEGFQDKTAYAQCVFAFSAGPGKEV 201
            +V GPVMVEDT LCFNALGGLPGPYIKWFL+ TGH+GLN +L  + DKTAYAQC+F FS GPG+ V
Sbjct:   87 QVGGPVMVEDTSLCFNALGGLPGPYIKWFLEKTGHEGLNNLLAAYPDKTAYAQCIFGFSPGPGQPV 152
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BLAST of mRNA_Ecto-sp13_S_contig77357.18970.1 vs. uniprot
Match: A0A7S4RKQ8_9DINO (Inosine triphosphate pyrophosphatase n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4RKQ8_9DINO)

HSP 1 Score: 112 bits (281), Expect = 1.550e-29
Identity = 50/68 (73.53%), Postives = 59/68 (86.76%), Query Frame = 1 
Query:    4 KVQGPVMVEDTGLCFNALGGLPGPYIKWFLDGTGHDGLNGILEGFQDKTAYAQCVFAFSAGPGKEVKV 207
            +VQGPVMVEDT LC++AL GLPGPYIKWFLD  GH+GLN +L G++DK+AYAQC FA SAGPG EV+V
Sbjct:   68 QVQGPVMVEDTCLCYHALKGLPGPYIKWFLDKLGHEGLNNLLAGYEDKSAYAQCTFALSAGPGCEVRV 135
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BLAST of mRNA_Ecto-sp13_S_contig77357.18970.1 vs. uniprot
Match: A0A816CXM4_9BILA (Inosine triphosphate pyrophosphatase n=2 Tax=Adineta steineri TaxID=433720 RepID=A0A816CXM4_9BILA)

HSP 1 Score: 112 bits (279), Expect = 1.690e-29
Identity = 49/65 (75.38%), Postives = 54/65 (83.08%), Query Frame = 1 
Query:    4 KVQGPVMVEDTGLCFNALGGLPGPYIKWFLDGTGHDGLNGILEGFQDKTAYAQCVFAFSAGPGKE 198
            +V GPV+VEDT LCFNAL GLPGPYIKWFLD  GHDGLN +L  ++DKTAYAQCVFAF AGP  E
Sbjct:   55 RVNGPVLVEDTSLCFNALNGLPGPYIKWFLDKLGHDGLNKLLTAYEDKTAYAQCVFAFCAGPSNE 119
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BLAST of mRNA_Ecto-sp13_S_contig77357.18970.1 vs. uniprot
Match: A0A815G9S2_9BILA (Inosine triphosphate pyrophosphatase n=2 Tax=Adineta steineri TaxID=433720 RepID=A0A815G9S2_9BILA)

HSP 1 Score: 111 bits (278), Expect = 2.460e-29
Identity = 50/65 (76.92%), Postives = 53/65 (81.54%), Query Frame = 1 
Query:    4 KVQGPVMVEDTGLCFNALGGLPGPYIKWFLDGTGHDGLNGILEGFQDKTAYAQCVFAFSAGPGKE 198
             V GPV++EDT LCFNAL GLPGPYIKWFLD  GHDGLN +L GF DKTAYAQCVFAF AGP  E
Sbjct:   55 SVNGPVLIEDTSLCFNALHGLPGPYIKWFLDKIGHDGLNKLLVGFDDKTAYAQCVFAFCAGPTSE 119
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BLAST of mRNA_Ecto-sp13_S_contig77357.18970.1 vs. uniprot
Match: ITPA_MONBE (Inosine triphosphate pyrophosphatase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=ITPA_MONBE)

HSP 1 Score: 111 bits (278), Expect = 2.790e-29
Identity = 48/67 (71.64%), Postives = 57/67 (85.07%), Query Frame = 1 
Query:    4 KVQGPVMVEDTGLCFNALGGLPGPYIKWFLDGTGHDGLNGILEGFQDKTAYAQCVFAFSAGPGKEVK 204
            +V+GPVMVEDT LCFNAL GLPGPYIKWFLD TGH GLN +L  + DK+AYAQC+FAF+ GPG E++
Sbjct:   61 EVKGPVMVEDTSLCFNALHGLPGPYIKWFLDKTGHVGLNNLLAAYPDKSAYAQCIFAFTTGPGAEIQ 127
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig77357.18970.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ77_ECTSI3.710e-3997.06Inosine triphosphate pyrophosphatase n=2 Tax=Ectoc... [more]
A0A7R9WJQ7_9STRA9.850e-3177.27Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A815TPX2_9BILA5.960e-3075.38Inosine triphosphate pyrophosphatase n=3 Tax=Rotar... [more]
A0A813WZV9_9BILA6.110e-3074.24Inosine triphosphate pyrophosphatase n=1 Tax=Didym... [more]
A0A816E7G0_ADIRI1.190e-2973.85Inosine triphosphate pyrophosphatase n=2 Tax=Adine... [more]
A0A7S3AYV9_9EUKA1.470e-2974.24Inosine triphosphate pyrophosphatase n=1 Tax=Hapto... [more]
A0A7S4RKQ8_9DINO1.550e-2973.53Inosine triphosphate pyrophosphatase n=1 Tax=Alexa... [more]
A0A816CXM4_9BILA1.690e-2975.38Inosine triphosphate pyrophosphatase n=2 Tax=Adine... [more]
A0A815G9S2_9BILA2.460e-2976.92Inosine triphosphate pyrophosphatase n=2 Tax=Adine... [more]
ITPA_MONBE2.790e-2971.64Inosine triphosphate pyrophosphatase n=1 Tax=Monos... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig77357contigEcto-sp13_S_contig77357:351..566 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score146.7
Seed ortholog evalue4e-33
Seed eggNOG ortholog2880.D7FZ77
Model size216
KEGG rclassRC00002
KEGG koko:K01519
KEGG ReactionR00426,R00720,R01855,R02100,R02720,R03531,R08243
KEGG Pathwayko00230,ko00983,ko01100,map00230,map00983,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576
Exons1
EggNOG free text desc.NADH pyrophosphatase activity
EggNOG OGsCOG0127@1,KOG3222@2759
Cds size216
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464043.7562044-CDS-Ecto-sp13_S_contig77357:350..5661681464043.7562044-CDS-Ecto-sp13_S_contig77357:350..566Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig77357 351..566 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig77357.18970.1prot_Ecto-sp13_S_contig77357.18970.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig77357 351..566 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig77357.18970.1

>prot_Ecto-sp13_S_contig77357.18970.1 ID=prot_Ecto-sp13_S_contig77357.18970.1|Name=mRNA_Ecto-sp13_S_contig77357.18970.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=72bp
MKVQGPVMVEDTGLCFNALGGLPGPYIKWFLDGTGHDGLNGILEGFQDKT
AYAQCVFAFSAGPGKEVKVCA*
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mRNA from alignment at Ecto-sp13_S_contig77357:351..566-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig77357.18970.1 ID=mRNA_Ecto-sp13_S_contig77357.18970.1|Name=mRNA_Ecto-sp13_S_contig77357.18970.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=216bp|location=Sequence derived from alignment at Ecto-sp13_S_contig77357:351..566- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGGTGCAAGGCCCGGTCATGGTGGAGGACACGGGGCTGTGCTTCAA
CGCTCTCGGCGGTCTGCCGGGACCGTACATTAAGTGGTTCCTCGACGGCA
CCGGCCACGACGGACTTAACGGCATCCTCGAGGGCTTCCAGGACAAGACG
GCGTACGCCCAGTGCGTCTTCGCCTTCAGCGCCGGCCCTGGCAAGGAAGT
CAAGGTTTGTGCATAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig77357:351..566-

>mRNA_Ecto-sp13_S_contig77357.18970.1 ID=mRNA_Ecto-sp13_S_contig77357.18970.1|Name=mRNA_Ecto-sp13_S_contig77357.18970.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=216bp|location=Sequence derived from alignment at Ecto-sp13_S_contig77357:351..566- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGGTGCAAGGCCCGGTCATGGTGGAGGACACGGGGCTGTGCTTCAA
CGCTCTCGGCGGTCTGCCGGGACCGTACATTAAGTGGTTCCTCGACGGCA
CCGGCCACGACGGACTTAACGGCATCCTCGAGGGCTTCCAGGACAAGACG
GCGTACGCCCAGTGCGTCTTCGCCTTCAGCGCCGGCCCTGGCAAGGAAGT
CAAGGTTTGTGCATAA
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