mRNA_Ecto-sp13_S_contig7694.18926.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7694.18926.1
Unique NamemRNA_Ecto-sp13_S_contig7694.18926.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7694.18926.1 vs. uniprot
Match: D7FWK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK4_ECTSI)

HSP 1 Score: 484 bits (1246), Expect = 1.330e-169
Identity = 228/251 (90.84%), Postives = 238/251 (94.82%), Query Frame = 1 
Query:    1 VFMMAQEWGPNYYHFTVEHLPRITLALDILLENPDIMIVMHHHGHDKWHDTSAELEAHMELFELIGISRERIVYTSHEVHANLAIVPTTTNCGDPDPNMVNMLRNRFLQGLFPATDGVPPVPPRPVIVLIVRSNIRGLENNDEVKEALKINFPSFDVVEFFGTDPVRDQLKTFATAAMIIAPHGAGLANMIVAPLHTPVLEIAPLECPPCFLRLAFKLHHIYARHTAGDDWTIRCNTWYNPGVDGIIDLAR 753
            VF+MAQEWGPNYYHFTVEHLPRITLALDIL++NPDIMIVM HHG DKWHDTS E E HMELFELIGISRER+V TSHEVHANLAIVPTTT CGDPDP+MVNMLRNRFLQ LFP T GVPPVPPRPVIVLIVRSNIRGLENN+EV+EAL++NF SFDVVEFFGTDPVRDQLK FATAAMIIAPHGAGLANMIVAPLHTPVLEIAPLECPPCFLRLAFKLHHIYARHTAGD+WTI CNTWYNPGVDGIIDLAR
Sbjct:  169 VFVMAQEWGPNYYHFTVEHLPRITLALDILIDNPDIMIVMRHHGQDKWHDTSTEFETHMELFELIGISRERVVDTSHEVHANLAIVPTTTICGDPDPHMVNMLRNRFLQSLFPDTGGVPPVPPRPVIVLIVRSNIRGLENNNEVREALEMNFTSFDVVEFFGTDPVRDQLKIFATAAMIIAPHGAGLANMIVAPLHTPVLEIAPLECPPCFLRLAFKLHHIYARHTAGDEWTISCNTWYNPGVDGIIDLAR 419
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BLAST of mRNA_Ecto-sp13_S_contig7694.18926.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 437 bits (1125), Expect = 2.330e-146
Identity = 209/217 (96.31%), Postives = 213/217 (98.16%), Query Frame = 1 
Query:    1 VFMMAQEWGPNYYHFTVEHLPRITLALDILLENPDIMIVMHHHGHDKWHDTSAELEAHMELFELIGISRERIVYTSHEVHANLAIVPTTTNCGDPDPNMVNMLRNRFLQGLFPATDGVPPVPPRPVIVLIVRSNIRGLENNDEVKEALKINFPSFDVVEFFGTDPVRDQLKTFATAAMIIAPHGAGLANMIVAPLHTPVLEIAPLECPPCFLRLAFK 651
            VFMMAQEWGPNYYHFTVEHLPRITLALDILLENPDIMIVMHHHGHDKWHDTS ELEAHMELFELIGISRERIVYTSHEVHANLAIVPTTTNCGDPDP+M+NMLRNRFLQGLFP TDGVPPVPPRPVIVLIVRSNIRGLENNDEVKEAL+ NFPSFDVVEFFGTDPVRDQLKTFATA+MIIAPHGAGLANMIVAPLHTPVLEIAPLECPPCFLRLA K
Sbjct:  586 VFMMAQEWGPNYYHFTVEHLPRITLALDILLENPDIMIVMHHHGHDKWHDTSVELEAHMELFELIGISRERIVYTSHEVHANLAIVPTTTNCGDPDPSMINMLRNRFLQGLFPGTDGVPPVPPRPVIVLIVRSNIRGLENNDEVKEALERNFPSFDVVEFFGTDPVRDQLKTFATASMIIAPHGAGLANMIVAPLHTPVLEIAPLECPPCFLRLALK 802
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BLAST of mRNA_Ecto-sp13_S_contig7694.18926.1 vs. uniprot
Match: D8LIQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIQ4_ECTSI)

HSP 1 Score: 422 bits (1086), Expect = 2.160e-144
Identity = 195/251 (77.69%), Postives = 218/251 (86.85%), Query Frame = 1 
Query:    1 VFMMAQEWGPNYYHFTVEHLPRITLALDILLENPDIMIVMHHHGHDKWHDTSAELEAHMELFELIGISRERIVYTSHEVHANLAIVPTTTNCGDPDPNMVNMLRNRFLQGLFPATDGVPPVPPRPVIVLIVRSNIRGLENNDEVKEALKINFPSFDVVEFFGTDPVRDQLKTFATAAMIIAPHGAGLANMIVAPLHTPVLEIAPLECPPCFLRLAFKLHHIYARHTAGDDWTIRCNTWYNPGVDGIIDLAR 753
            VF+M Q+WGPNYYHFTVEHLPRITLALDILL NPDIMI +H H  D WHDTS ELEAHM +FE++GISRERI+     +HA+L IVPTTT CGDPD +MVNMLRNRFLQGLFP TDGVPP PPRPVIVL+VR+ +RGL+NN+EV+EAL++NFPSFDVVEFFGTDPVRDQLKTFA+AAMIIAPHGAGLANM+VAPLHTPVLEIAP+ CPPCFLRLA KLHH+YARH  G  WT RC TWY   VD I+ LAR
Sbjct:  229 VFVMTQDWGPNYYHFTVEHLPRITLALDILLRNPDIMIAVHFHDTDHWHDTSTELEAHMGMFEILGISRERIILVKTRIHADLVIVPTTTVCGDPDAHMVNMLRNRFLQGLFPTTDGVPPAPPRPVIVLVVRTTLRGLKNNEEVREALEMNFPSFDVVEFFGTDPVRDQLKTFASAAMIIAPHGAGLANMVVAPLHTPVLEIAPIRCPPCFLRLALKLHHVYARHPGGK-WTKRCQTWYKTDVDEIVTLAR 478
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BLAST of mRNA_Ecto-sp13_S_contig7694.18926.1 vs. uniprot
Match: A0A6H5JZT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZT9_9PHAE)

HSP 1 Score: 421 bits (1083), Expect = 1.080e-141
Identity = 194/251 (77.29%), Postives = 220/251 (87.65%), Query Frame = 1 
Query:    1 VFMMAQEWGPNYYHFTVEHLPRITLALDILLENPDIMIVMHHHGHDKWHDTSAELEAHMELFELIGISRERIVYTSHEVHANLAIVPTTTNCGDPDPNMVNMLRNRFLQGLFPATDGVPPVPPRPVIVLIVRSNIRGLENNDEVKEALKINFPSFDVVEFFGTDPVRDQLKTFATAAMIIAPHGAGLANMIVAPLHTPVLEIAPLECPPCFLRLAFKLHHIYARHTAGDDWTIRCNTWYNPGVDGIIDLAR 753
            VF+M Q+WGPNYYHFTVEHLPRITLALDILLEN +IMI +H+H  DKWHDTS ELEAHM +FE++GISRERI+     ++A+L IVPTTT CGDPD +MVNMLRNRFLQGLFP T+GVPP PPRPVIVL+VR+ +RGL+NNDEV+EAL+INFPSFDVVEFFGTDPVRDQLKTFATAAMIIAPHGAGLAN++VAPLHTPVLEIAP+ CPPCFLRL+ KLHH+YARH  G  W  RC TWY P VD I+ LAR
Sbjct:  401 VFVMTQDWGPNYYHFTVEHLPRITLALDILLENSEIMIAVHYHDTDKWHDTSTELEAHMGMFEILGISRERIILVKTRIYADLVIVPTTTVCGDPDAHMVNMLRNRFLQGLFPTTNGVPPAPPRPVIVLVVRTTLRGLKNNDEVREALQINFPSFDVVEFFGTDPVRDQLKTFATAAMIIAPHGAGLANVVVAPLHTPVLEIAPIRCPPCFLRLSLKLHHVYARHPGGK-WKKRCQTWYKPDVDEIVTLAR 650
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BLAST of mRNA_Ecto-sp13_S_contig7694.18926.1 vs. uniprot
Match: A0A6H5L2R1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R1_9PHAE)

HSP 1 Score: 395 bits (1016), Expect = 3.380e-137
Identity = 185/250 (74.00%), Postives = 211/250 (84.40%), Query Frame = 1 
Query:   10 MAQEWGPNYYHFTVEHLPRITLALDILLENPDIMIVMHHHGHDKWHD--TSAELEAHMELFELIGISRERIVYTSHEVHANLAIVPTTTNCGDPDPNMVNMLRNRFLQGLFPATDGVPPVPPRPVIVLIVRSNIRGLENNDEVKEALKINFPSFDVVEFFGTDPVRDQLKTFATAAMIIAPHGAGLANMIVAPLHTPVLEIAPLECPPCFLRLAFKLHHIYARHTAGDDWTIRCNTWYNPGVDGIIDLAR 753
            M QEW PNYYHFTVEHLPRIT+ALDILLENP+I I MH+  HDK H    S E+E HME+FE++GISR+R+V    ++HA LAIVPT+T CGDPD +MVNMLRNR LQGLFP T+GVPP P RPVIVL+VR+ +RGL+NNDEVKEALKINFPSFDVVEFFGTDPVRDQL TFA A+M+IAPHGAGLANMIVAPLHTPVLEIAPL CP CFLRLA KLHHIYARH  G+ W+  C+TWY P +D ++DL R
Sbjct:    1 MTQEWNPNYYHFTVEHLPRITVALDILLENPEIKIAMHYSQHDKLHKGGLSNEIETHMEMFEILGISRDRVVLAMKQMHAELAIVPTSTMCGDPDAHMVNMLRNRLLQGLFPTTNGVPPAPARPVIVLVVRTTLRGLKNNDEVKEALKINFPSFDVVEFFGTDPVRDQLLTFAKASMVIAPHGAGLANMIVAPLHTPVLEIAPLSCPSCFLRLALKLHHIYARHPGGE-WSQECHTWYEPDIDEVVDLVR 249
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BLAST of mRNA_Ecto-sp13_S_contig7694.18926.1 vs. uniprot
Match: D7FWK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK6_ECTSI)

HSP 1 Score: 395 bits (1016), Expect = 1.100e-131
Identity = 186/253 (73.52%), Postives = 213/253 (84.19%), Query Frame = 1 
Query:    1 VFMMAQEWGPNYYHFTVEHLPRITLALDILLENPDIMIVMHHHGHDKWHDT--SAELEAHMELFELIGISRERIVYTSHEVHANLAIVPTTTNCGDPDPNMVNMLRNRFLQGLFPATDGVPPVPPRPVIVLIVRSNIRGLENNDEVKEALKINFPSFDVVEFFGTDPVRDQLKTFATAAMIIAPHGAGLANMIVAPLHTPVLEIAPLECPPCFLRLAFKLHHIYARHTAGDDWTIRCNTWYNPGVDGIIDLAR 753
            VF+M QEW PNYYHFTVEHLPRITL LD+LLENPDIMI MH+  HDK H    S E+E HME+FE++GISR+R+V    ++HA LAIVPT+T CGDPD +MVNMLRNRFLQ LFP T+GVPP   RPVIVL+VR+ +RGL+NNDEVKEAL+INFPSFDVVEFFGTDPV+DQL TFA A+M+IAPHGAGLAN+IVAPLHTPVLEIAPL CP CFLRLA KLHHIYARH  G+ W+  C+TWY P +D IIDL R
Sbjct:  392 VFVMTQEWNPNYYHFTVEHLPRITLMLDVLLENPDIMIAMHYSQHDKLHQGGFSNEIETHMEMFEILGISRDRVVLAMKQMHAELAIVPTSTICGDPDAHMVNMLRNRFLQSLFPTTNGVPPAQARPVIVLVVRTTLRGLKNNDEVKEALEINFPSFDVVEFFGTDPVQDQLLTFANASMVIAPHGAGLANIIVAPLHTPVLEIAPLSCPSCFLRLALKLHHIYARHPGGE-WSQECHTWYEPDIDEIIDLVR 643
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BLAST of mRNA_Ecto-sp13_S_contig7694.18926.1 vs. uniprot
Match: A0A6H5L311_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L311_9PHAE)

HSP 1 Score: 393 bits (1009), Expect = 1.470e-130
Identity = 185/252 (73.41%), Postives = 213/252 (84.52%), Query Frame = 1 
Query:    1 VFMMAQEWGPNYYHFTVEHLPRITLALDILLENPDIMIVMHHHGHDKWHDT-SAELEAHMELFELIGISRERIVYTSHEVHANLAIVPTTTNCGDPDPNMVNMLRNRFLQGLFPATDGVPPVPPRPVIVLIVRSNIRGLENNDEVKEALKINFPSFDVVEFFGTDPVRDQLKTFATAAMIIAPHGAGLANMIVAPLHTPVLEIAPLECPPCFLRLAFKLHHIYARHTAGDDWTIRCNTWYNPGVDGIIDLAR 753
            VF+MAQEW PNYYHFT EHLPRITL LD+LL+NPDI+I MH +  D  H+  SA  E  ME+ E++GISRER+V    ++HANLAI+PT+T CGDPDP+MVNMLRNRFLQGLFP T+GVPP PPRP IVL+VR+ +RGL+NN+EVKEALKI+FPSFDVVEFFGTDPV  Q KTFATAAMI+APHGAGLAN+IVAPLHTPVLEIAP+ CPPCFLRLA KLHHIYARH  GD W+  C +WY P VD II+LAR
Sbjct:  408 VFVMAQEWSPNYYHFTAEHLPRITLMLDVLLDNPDIIISMHFYEKDIIHENISAVHEVQMEMLEILGISRERVVLVDQQMHANLAIIPTSTVCGDPDPHMVNMLRNRFLQGLFPTTNGVPPAPPRPTIVLVVRTTLRGLQNNEEVKEALKISFPSFDVVEFFGTDPVGHQFKTFATAAMIVAPHGAGLANIIVAPLHTPVLEIAPISCPPCFLRLALKLHHIYARHP-GDHWSQECMSWYEPPVDEIIELAR 658
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7694.18926.1 vs. uniprot
Match: D8LIQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIQ6_ECTSI)

HSP 1 Score: 382 bits (982), Expect = 1.100e-129
Identity = 184/251 (73.31%), Postives = 209/251 (83.27%), Query Frame = 1 
Query:    1 VFMMAQEWGPNYYHFTVEHLPRITLALDILLENPDIMIVMHHHGHDKWHDT-SAELEAHMELFELIGISRERIVYTSHEVHANLAIVPTTTNCGDPDPNMVNMLRNRFLQGLFPATDGVPPVPPRPVIVLIVRSNIRGLENNDEVKEALKINFPSFDVVEFFGTDPVRDQLKTFATAAMIIAPHGAGLANMIVAPLHTPVLEIAPLECPPCFLRLAFKLHHIYARHTAGDDWTIRCNTWYNPGVDGIIDLA 750
            VF+M QEW PNYYHFTVEHLPRITL LDILLENP+IMI MH +  D  HD  SA  E  ME+ E++GI+R+R+V+ + E+HA LAIVPT+TNCGDPD  MVNMLRNRFLQGLFP T+GVPP PPRPVIVLIVR+ +RGL NN+EVKEAL+ NFPSFDVVEFFG   VRDQL+TFATAAMIIAPHGAGLANMIVAPLHTPVLEI  L CPPCFLRLA KLHHIYARH  G+ W+  C+ W+ P VD I++LA
Sbjct:  161 VFVMTQEWTPNYYHFTVEHLPRITLGLDILLENPEIMISMHFYQPDPLHDDISAVQEVQMEMLEILGINRKRVVFVNKEMHAELAIVPTSTNCGDPDLQMVNMLRNRFLQGLFPTTNGVPPAPPRPVIVLIVRNELRGLMNNEEVKEALERNFPSFDVVEFFGAGSVRDQLETFATAAMIIAPHGAGLANMIVAPLHTPVLEIGTLACPPCFLRLALKLHHIYARHPGGE-WSQTCHAWFRPDVDEIVELA 410
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7694.18926.1 vs. uniprot
Match: A0A6H5JTU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTU1_9PHAE)

HSP 1 Score: 386 bits (992), Expect = 4.130e-128
Identity = 182/252 (72.22%), Postives = 214/252 (84.92%), Query Frame = 1 
Query:    1 VFMMAQEWGPNYYHFTVEHLPRITLALDILLENPDIMIVMHHHGHDKWH-DTSAELEAHMELFELIGISRERIVYTSHEVHANLAIVPTTTNCGDPDPNMVNMLRNRFLQGLFPATDGVPPVPPRPVIVLIVRSNIRGLENNDEVKEALKINFPSFDVVEFFGTDPVRDQLKTFATAAMIIAPHGAGLANMIVAPLHTPVLEIAPLECPPCFLRLAFKLHHIYARHTAGDDWTIRCNTWYNPGVDGIIDLAR 753
            VF+M QEW PNYYHFTVEHLPRITLALDILLENP+I I MH++  D  H D SA  E  ME+ E++GI+R+R+V+ + E+HA LAIVPT+TNCGDPD  MVNMLRNRFLQGLFP T+G+PP PPRPVIVL+VR+ +RGL NN+EVKEAL+ NFPSF VVEFFGT  VRDQL+TFATAAMIIAPHGAGLANM+VAPLHTPVLEI  L CPPCFLRLA KLHHIYARH  G+ W+ +C+TW++P VD +++LAR
Sbjct:  401 VFVMTQEWTPNYYHFTVEHLPRITLALDILLENPEIAISMHYYQRDPLHQDISAVQEVQMEMLEILGINRKRVVFVNREMHAELAIVPTSTNCGDPDLQMVNMLRNRFLQGLFPTTNGLPPAPPRPVIVLVVRNKLRGLMNNEEVKEALERNFPSFSVVEFFGTGSVRDQLETFATAAMIIAPHGAGLANMMVAPLHTPVLEIGTLACPPCFLRLALKLHHIYARHPGGE-WSQKCHTWFHPDVDEVVELAR 651
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7694.18926.1 vs. uniprot
Match: D8LIQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIQ5_ECTSI)

HSP 1 Score: 367 bits (942), Expect = 1.220e-121
Identity = 184/286 (64.34%), Postives = 210/286 (73.43%), Query Frame = 1 
Query:    1 VFMMAQEWGPNYYHFTVEHLPRITLALDILLENPDIMIVMHHHGHDKWH-DTSAELEAHMELFELIGISRERIVYTSHEVHANLAIVPTTTNCGDPDPNMVNMLRNRFLQ-----------------------------------GLFPATDGVPPVPPRPVIVLIVRSNIRGLENNDEVKEALKINFPSFDVVEFFGTDPVRDQLKTFATAAMIIAPHGAGLANMIVAPLHTPVLEIAPLECPPCFLRLAFKLHHIYARHTAGDDWTIRCNTWYNPGVDGIIDLA 750
            VF+M QEW PNYYHFTVEHLPRITL LDILLENP+IMI MH +  D  H D SA  E  ME+ E++GI+R+R+V+ + E+HA LAIVPT+TNCGDPD  MVNMLRNRFLQ                                   GLFP T+GVPP PPRPVIVL+VR+ +RGL NN+EVKEAL+ NFPSFDVVEFFGT  VRDQL+TFATAAMIIAPHGAGLANM+VAPLHTPVLEI  L CPPCFLRLA KLHHIYARH  G+ W+  C+ WY P VD I++LA
Sbjct:  285 VFVMTQEWTPNYYHFTVEHLPRITLGLDILLENPEIMISMHFYQRDPLHHDISAVQEVQMEMLEILGINRKRVVFVNTEMHAELAIVPTSTNCGDPDLQMVNMLRNRFLQISMHVGVVLVGMGWHCPLTKQNLSTSSATAALSSQGLFPTTNGVPPAPPRPVIVLVVRNKLRGLMNNEEVKEALERNFPSFDVVEFFGTGSVRDQLETFATAAMIIAPHGAGLANMMVAPLHTPVLEIGTLACPPCFLRLALKLHHIYARHPGGE-WSQTCHAWYQPDVDEIVELA 569
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7694.18926.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWK4_ECTSI1.330e-16990.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7Y8_9PHAE2.330e-14696.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIQ4_ECTSI2.160e-14477.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZT9_9PHAE1.080e-14177.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L2R1_9PHAE3.380e-13774.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWK6_ECTSI1.100e-13173.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L311_9PHAE1.470e-13073.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIQ6_ECTSI1.100e-12973.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTU1_9PHAE4.130e-12872.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIQ5_ECTSI1.220e-12164.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7694contigEcto-sp13_S_contig7694:563..6457 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score485.7
Seed ortholog evalue1.3e-134
Seed eggNOG ortholog2880.D7FWK4
Model size756
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.Protein of unknown function (DUF563)
EggNOG OGs2E14A@1,2S8GN@2759
Cds size750
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7694.18926.1prot_Ecto-sp13_S_contig7694.18926.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7694 563..6451 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464039.843464-CDS-Ecto-sp13_S_contig7694:562..6671681464039.843464-CDS-Ecto-sp13_S_contig7694:562..667Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7694 563..667 -
1681464039.8609424-CDS-Ecto-sp13_S_contig7694:1221..14431681464039.8609424-CDS-Ecto-sp13_S_contig7694:1221..1443Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7694 1222..1443 -
1681464039.8806567-CDS-Ecto-sp13_S_contig7694:4003..41051681464039.8806567-CDS-Ecto-sp13_S_contig7694:4003..4105Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7694 4004..4105 -
1681464039.8917203-CDS-Ecto-sp13_S_contig7694:4361..44541681464039.8917203-CDS-Ecto-sp13_S_contig7694:4361..4454Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7694 4362..4454 -
1681464039.9218616-CDS-Ecto-sp13_S_contig7694:5328..54511681464039.9218616-CDS-Ecto-sp13_S_contig7694:5328..5451Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7694 5329..5451 -
1681464039.9328969-CDS-Ecto-sp13_S_contig7694:6346..64511681464039.9328969-CDS-Ecto-sp13_S_contig7694:6346..6451Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7694 6347..6451 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464039.944453-UTR-Ecto-sp13_S_contig7694:6451..64571681464039.944453-UTR-Ecto-sp13_S_contig7694:6451..6457Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7694 6452..6457 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7694.18926.1

>prot_Ecto-sp13_S_contig7694.18926.1 ID=prot_Ecto-sp13_S_contig7694.18926.1|Name=mRNA_Ecto-sp13_S_contig7694.18926.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=250bp
MMAQEWGPNYYHFTVEHLPRITLALDILLENPDIMIVMHHHGHDKWHDTS
AELEAHMELFELIGISRERIVYTSHEVHANLAIVPTTTNCGDPDPNMVNM
LRNRFLQGLFPATDGVPPVPPRPVIVLIVRSNIRGLENNDEVKEALKINF
PSFDVVEFFGTDPVRDQLKTFATAAMIIAPHGAGLANMIVAPLHTPVLEI
APLECPPCFLRLAFKLHHIYARHTAGDDWTIRCNTWYNPGVDGIIDLAR*
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mRNA from alignment at Ecto-sp13_S_contig7694:563..6457-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7694.18926.1 ID=mRNA_Ecto-sp13_S_contig7694.18926.1|Name=mRNA_Ecto-sp13_S_contig7694.18926.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5895bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7694:563..6457- (Ectocarpus species13 EcNAP12_S_4_19m)
GTTTTCATGATGGCCCAAGAGTGGGGACCGAACTACTACCACTTTACGGT
GGAGCATCTCCCGCGGATCACTTTGGCGTTAGACATCCTTCTCGAAAACC
CAGACATCATGGTGAGTGCGACGGCGTCATTCCCCTTTTTCGTTCATCAT
CTCATTTTTGCGAAGTCGCTCGCAGTTTGTGTCAGATGGAGCTGCAGCAC
GTGTAGGATCGTATGCGGCATAGTTACAATTGACCTCTACGGCGTGGGCT
CATGAAGGGAAAGAGTCATCTATGGGTGATGCAACATGACATTAAAAGCA
GGCAGCAAGACCGGCACACAGCTGGCGGAAGAAGACCTTGCCCGTGATTC
AATCTATGTGTCTTCTTTCTCAGCGCGCACACGACCTTTTATTTGTCTAC
AAGCGTTGCGTTGTATTCTTTTTGGTGCTTGTGCTCGAGTGAACGCTGCG
CGAAGTAGGCCACGTTCTTGTTGGATGGAAATTTTTGTGACAAGCGTCTC
TTTTGCTTTGCGCCTAAATGTGCATGCGTAGCTGTCAGTTGGTGTCGACG
ATGGTCCTCTTCAGCAGTGGCGACCAGCGTGCTGCATGCGTTGATCGGTG
CGTTGCATTAGGGTTGCAGACCGGGCGAAAACGCAAGGAACGTGTGCGCG
ACCGAGACAACGACGAACTGCGATTTGGCACACCGGCGCCGGTTCTCCCA
CACACGCACTCCACTTCCATGGCTCCAATATCTGAGGGCAAACCTCGATG
ACGATGACATCTTCCTGCCACAGCATTTCACGGTGCCTGGTGGCGGTACA
TTGAGGAGCGTTGTTGCTTTTTCTTGTAAGCGTTGGTCCGTGGTATCACC
CGTCACATATGGTGCTGCTCCGGAATGTCCAATTTACTGTCGCTCGTTTT
CGGACTGTAAATGACAAAGTGGGTTGCATGTAGGACAAAAAAAAATTGTC
GATGTAATCATGCTCTTGTTGACGTCCCCCGTGTGTATTTGTACAACCGC
ATTCAGATCGTTATGCACCACCACGGGCACGACAAGTGGCATGACACTTC
CGCAGAGCTCGAGGCTCATATGGAGCTGTTCGAGCTTATTGGAATCAGCA
GAGAGCGCATCGTTTATACCTCGCACGAGGTGGGAAAATGTTTTCGGTGA
TGAAGCTTGCTGCTTGTTGCTATCGTTGTTTACTGCGATAACAGTGGTCA
CGAAATTCAAGTCTACACGCGGAATCCAGCAACACGACCATGTTGGAAGG
CTCGACTAGTCATGATTTTGAGTACCACCGACGAGGTCGTACCCCGACAG
GGTCCATCAAATAAATTGTCAAGATGACAAACGCCAGCTGGGCAAAAAAG
AGCTTCGCGATGGCTGTCTCGTATTGTAGGTCGGGAATTCGAAAATGTAC
GCCCTATCGAGGTACCTTTCCCTTGACGCTTCCGCAGTTGCCGCCAGGCG
TTGGTGATCGTGTGATGACACGTTGAGCGAAATTTCCTCAAGATTTGCAG
GAATAGGGCAGCAGCTATTATCGGAGAATCTCATCTGTGTTCGTCCTGCT
GAGTGGCTAGGTTGGGCGTGGTGGATGAAATATAGCATCCATCGAAACTA
GATTGCACAAGTAGTACCACCACCTGGACTGGGGTGGCACCATAGGAGGA
GTCCTTCGTTTTAGCTCGTGTACAAGTGCTTTGAACGTACAGCAGGCTCT
TCCATCGCACACACTTTCCACCGCGTCCCCCGCCCAGGGACATGCGCGGA
ACTTTTCCCGTTTCTTTGTTGTTCCGCTTAAGGCGGCGTATGTCGCATTT
CAGCCGGAGCGCAGGTAGTTTGATGGTATATCTCAACGAGCCAACACACA
CGCCCCGCGGATGTGATGGCTCTGAGGCTTGCACCAGTCCACGGCCTAGC
GCGGCTTGACGCTCACCCATGCACAGCCAGGGGCGCATCGCCTACAGGCC
GATGTCTCACCCTCTTCAACGCTCAAGCCGCAAGCCCTCCCTTACTGTCC
CAGGTCCATGCAAATCTAGCGATTGTGCCGACTACTACTAATTGCGGCGA
CCCGGACCCTAACATGGTCAACATGCTCAGGAACAGATTCCTGCAGGTGC
GCAGCGAGCGAAAAACCGAATGGTGTTCTTTTTTGGCAGGGGGTAAAGAA
TCTTGTCATTGGTTCGGTTTCTTGTATCTTTTCGACACCCTTCGTTCTAC
TACTTATTGCTGTTTTCTTCTCTTGCTCGTTTCCGCCTTCCGCAAGCCTG
CCGATACATGTGTGTGTCATCCAGGTTCGAAAGGATCGACATGGTGAAGT
GATGATCTAAAACAGATACGAACCACGGCATCCTCGCTCACTGCCGTTGC
AGGGTCTGTTTCCGGCAACGGACGGCGTTCCTCCTGTTCCGCCCCGCCCG
GTGATCGTGCTCATTGTGCGCAGCAATATACGGGGCCTGGAAAACAACGA
CGAGGTATGTGTCCATGGGCAACAAAAATGTCCTTCACAATGATTTTGAC
TGCCGATCCTTTCGTGGTGCCGACGCTCCATGGAAACCTTGCGCTACAGT
AGCGCGAAGCGCCAAAAACCTTGCAGACATGTCGATCTTTGTAGACGGCG
AAAGACCCATGGGTGGACGTACACAGCGCAGTAAATATGGGGATATGGGG
ATATGCCCGTGCGTACGCAGCCCGATCAAAGCCGATCCGTGATCGATACC
TTCCACAAAGGTAAGTTTTCAGGGGTCTCGAAGGACGATTTTGCCGCATG
GTAGCTTGAGTGGATGCTGCACGTCCAGGAGGTTCATTCTCAACCTGGTG
AATTTGCCATCACGACTTTCCTTCGAGTTAATGGAAGCTTCCACAACTTG
AAAAGCTTCTAGCTTCAATGAGGTCACCGGCGAAAGTGCCGCCATACTTC
CACCGAAATATGGCATCTGCCATGGAAGTGTTGATGGTCAATGGATACTC
GTTTCTTGTAGGATGTTGATGGGTTTTTTTTTGCGTCCCCAACTCCAGCT
TCAAGAAATAAAGATGTCTGCTTCCCCGATTTTTTGAAATATTCCAATCG
AAGTTGTACGAGCTTCCACGATGTTGTCACATCCACAATAGAAAGTGTGA
TGGTGTTGCTTTCTCTTCCATCACTCAATCTCCACGGTATTCCCTGAATG
CGAGTATTTGCAGCTTTGCGGATATACCTACACGAGATGATACGAGAGGA
AGGGCACACGTCCGATTCATCACAAACTGCAAAGAAGTCGATACCAGGGA
GGAATCTAAAGCAGCAGCAAATACGTTGGGACGCTGAGCGTTTAGTCTTG
CTATTGTTGTGCCTGGTTCTTCGGATCGTCGTGAGTGTACGTGTTTCGTT
CCACCATGAAACTCGACGCACCACAAACATTAAACCCCCCTTGGCATTTT
CCCTTGGTATGCAGCTGACTATGAAAGCACCGACGAATGCCTCCTAAGTT
TTCTACCTCCCCTGTTCTGAGGACGAGCGCGCCGTCCAACGGCCGAATCT
AGCGGACTTGTCGGGTATATCGAAACCCGACCGCACGAAATTTGTGTACG
TTTTTTTTCTGTTTGCTGTTTGATGCATGAGTGCTTCGCGCCCCCCCCTA
CCGGGGGGGGCGAGCTCACGCATATACCCGTAGGTGAAGGAAAGGAAGGG
TTTGAAGTTGTAAAGAATGTTGGCAAGTGGTGAAGACTCAATTTTGTCGT
TTATGTCCACGACGTTACCATAACCAACTCGGACTACTTGAGTGATTCCG
AGGGTTTCTCACACGCATGATACACATGTATACATGCCTGCGGCGGGCTA
TGCGACGGAAATTTGCAACCCCACCTTCTCTGGCAGGCCCATGGAATGGC
ACCTCAACATTGCGAATATTTTTAAGTCTCATTCCGCGAGGAAAACTGGT
ATCCTAAATCGCAATATGTGCTGTATAACGTGCACAGGCGCACGACTTTT
GAACTGTATGTACTGCAGGATTGGATGTGGGCAGGCTGCAAACCTCCCGT
CGTATTGTACCTTCCATATACATGGGCAGGCTTTGCGAAGTTGCTTGGCA
ACGCTTTGCAGAGCTGCGACTATTTCACGCTTGCACAGCACCTGCCTACA
GAACATGGAGGATCGGGTAGGCACTGCGCTATGCTGTGCGTACGCGTCTG
TCTACTGTGGTACAGCAAAATAAATATCGATAGATCCAGGTTCGGAGGGT
CACTGATATTAAAATACGTGCGTCATCACACCGCTTGGTTACACAGCGCC
GATCCCGGGGACACATTCACATGAAACGGCGATTCTGTTTTGTTTCCGCC
AAAGGTTTGTGTTGTGTGTGTAGTTCTGGTTGATGCTAAAGCTGTGTAGG
CAGCGGGCGCGCTACGCGCGGGGCGCGCTGTGCGTACACAATTCCCGTCC
GGGAGCTGCAGGAAAAACGCAAAGAAAGACTGAGCGTCGCGGGAGGTAGA
AACTGCTGCCGCTGCCAGATGCAATGTTGTGACGTAACTTATGACCACAG
CTGGTTAGACTATGACGTAGACGAACGAAAAAACAGAACAGAACCGACCG
GAACCACCGAGTGGCGCGAGACTCTCGGGTCTTGCCGGCTACATGCTCCC
CGTGCCGGAGCCGAAAGAATAACAGGAATCGTTGGTGTGTATGCCGAAGC
AAATCGGGCTTACGAAAGAACGCGGGCTGCGAAAAGGCACGGCATAGTGC
TAGCGAAAGATACAACATACTTCATACTCTATAATGTAGTGTCTGGCTAA
TTATGTCCACTGGGTATGATCCAATGCTATGAAAGTGCAGTCTTCTCGAC
GGTCCGATGCTGTTCGAGAGCGATGCAACACCAACAACGATACAACGCCA
ACAACGATGCAACACCAACAACGGTACAACACCAACAACGGTACAACGCC
AACAACGGTACAACACCAACAACAGTACAACACCAACAACGATGCAACAC
CAACAACGGTGCAACACCAACCACGGTACAATACCAACAACGGTACAACA
CTGATCTCTTCTAGGTGAAGGAGGCTCTGAAGATCAATTTTCCGAGCTTC
GACGTGGTGGAGTTCTTCGGCACAGATCCCGTCCGAGACCAGCTCAAGAC
ATTCGCAACCGCAGCCATGATCATAGCTCCCCACGGAGCCGGCCTTGCCA
ACATGATCGTGGCACCCCTGCACACTCCAGTGCTGGAGATTGCCCCGTTG
GAGTGCCCCCCCTGCTTCTTGAGGCTCGCCTTTAAGGTACGGATTGACCG
TAGGTGGGGATATGGTGTGCAGTAATAGGAATACGAAGCTCGGTTTCAGG
ACGAGTGGTGCTTTCCCGCGCCGAGACGTTGAGCGTGCTTGCAGCAGGAC
ACACGTTCACACCGCACAAAAGAGAGCTACAGCATGACGCCCAGGCCCTC
TGTCACATGCAGCAGTAGGTACAGCGTCATTGATTGTACGTTGCATAAAT
GGTGATTTTGATGCCGGCGTGTGTGCTCGTGTTGAGTGCCCCGGACGGCA
GAGCACCTGTGTGTCTAATGGGGTTTACTTGAGGACGGCAAGGCACCTGT
TTGTTTTACGACGTTTGCTGAAGGTGGCAGGAAGCACGTGGCCTACCGGA
AACTTGAACGATTTGACTTTCCAGTAGTCGGTCACTTGTTAGGTCTTCCT
CGCATTGAAGAACGAAGCTGCGTCTCTGTTCGCAGCAAACAAGGGAAAAG
TCGCACTTTGAAATACTCTCCAATCGCTGCTTGCTGCCGTGTCGCCCGAC
CAAACATTGTTTTCTGCAACCAACATTGACCGAACTAAAGCTTCACCACA
TCTACGCGAGACACACCGCCGGCGATGATTGGACGATACGCTGCAATACA
TGGTACAACCCAGGCGTCGATGGAATTATCGACCTCGCAAGGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7694:563..6457-

>mRNA_Ecto-sp13_S_contig7694.18926.1 ID=mRNA_Ecto-sp13_S_contig7694.18926.1|Name=mRNA_Ecto-sp13_S_contig7694.18926.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=750bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7694:563..6457- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATGGCCCAAGAGTGGGGACCGAACTACTACCACTTTACGGTGGAGCA
TCTCCCGCGGATCACTTTGGCGTTAGACATCCTTCTCGAAAACCCAGACA
TCATGATCGTTATGCACCACCACGGGCACGACAAGTGGCATGACACTTCC
GCAGAGCTCGAGGCTCATATGGAGCTGTTCGAGCTTATTGGAATCAGCAG
AGAGCGCATCGTTTATACCTCGCACGAGGTCCATGCAAATCTAGCGATTG
TGCCGACTACTACTAATTGCGGCGACCCGGACCCTAACATGGTCAACATG
CTCAGGAACAGATTCCTGCAGGGTCTGTTTCCGGCAACGGACGGCGTTCC
TCCTGTTCCGCCCCGCCCGGTGATCGTGCTCATTGTGCGCAGCAATATAC
GGGGCCTGGAAAACAACGACGAGGTGAAGGAGGCTCTGAAGATCAATTTT
CCGAGCTTCGACGTGGTGGAGTTCTTCGGCACAGATCCCGTCCGAGACCA
GCTCAAGACATTCGCAACCGCAGCCATGATCATAGCTCCCCACGGAGCCG
GCCTTGCCAACATGATCGTGGCACCCCTGCACACTCCAGTGCTGGAGATT
GCCCCGTTGGAGTGCCCCCCCTGCTTCTTGAGGCTCGCCTTTAAGCTTCA
CCACATCTACGCGAGACACACCGCCGGCGATGATTGGACGATACGCTGCA
ATACATGGTACAACCCAGGCGTCGATGGAATTATCGACCTCGCAAGGTGA
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