mRNA_Ecto-sp13_S_contig767.18900.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig767.18900.1
Unique NamemRNA_Ecto-sp13_S_contig767.18900.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig767.18900.1 vs. uniprot
Match: D8LLF6_ECTSI (ABC1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLF6_ECTSI)

HSP 1 Score: 649 bits (1674), Expect = 1.190e-230
Identity = 316/319 (99.06%), Postives = 318/319 (99.69%), Query Frame = 1
Query:    1 MSDLHRRSAERLRDLCSVNGGVYVKLGQHLSQLDFVLPPEFIDVLRCMLDQAPQTPIEDVREVIREELGEYPETLWRTFDPKAIASASLAQVHRAEGWNGEQLAVKVQHRGLRETSKGDVDAVCLVVAAVDRLFPKFSYKWLADEVERNLPRELDFLHEASNSRRCAAMFEGRSDICVPPVVSEQTAERVLTMKFEPGLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPDARRGSGRPQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGDMYHLLAAILCGRS 957
            MSDLHRRSAERLRDLCSVNGGVYVKLGQHLSQLDFVLPPEFIDVLRCMLDQAPQTPIEDVREVIREELGEYPETLWRTFDPKAIASASLAQVHRAEGWNGEQLAVKVQHRGLRETSKGDVDAVCLVVAAVDRLFPKFSYKWLADEVERNLPRELDFLHEASNSRRCAAMFEGRSDICVPPVV EQTAERVLTMKFEPGLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHP+ARRGSGRPQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPGVK+YCQRLNSGDMYHLLAAILCGRS
Sbjct:  169 MSDLHRRSAERLRDLCSVNGGVYVKLGQHLSQLDFVLPPEFIDVLRCMLDQAPQTPIEDVREVIREELGEYPETLWRTFDPKAIASASLAQVHRAEGWNGEQLAVKVQHRGLRETSKGDVDAVCLVVAAVDRLFPKFSYKWLADEVERNLPRELDFLHEASNSRRCAAMFEGRSDICVPPVVREQTAERVLTMKFEPGLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPEARRGSGRPQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPGVKKYCQRLNSGDMYHLLAAILCGRS 487          
BLAST of mRNA_Ecto-sp13_S_contig767.18900.1 vs. uniprot
Match: A0A6H5KV11_9PHAE (ABC1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV11_9PHAE)

HSP 1 Score: 338 bits (867), Expect = 3.620e-114
Identity = 166/167 (99.40%), Postives = 167/167 (100.00%), Query Frame = 1
Query:    1 MSDLHRRSAERLRDLCSVNGGVYVKLGQHLSQLDFVLPPEFIDVLRCMLDQAPQTPIEDVREVIREELGEYPETLWRTFDPKAIASASLAQVHRAEGWNGEQLAVKVQHRGLRETSKGDVDAVCLVVAAVDRLFPKFSYKWLADEVERNLPRELDFLHEASNSRRCA 501
            MSDLHRRSAERLRDLCSVNGGVYVKLGQHLSQLDFVLPPEFIDVLRCMLDQAPQTPIEDVREVIREELGEYPETLWRTFDPKAIASASLAQVHRAEGWNGEQLAVKVQHRGLRETSKGDVDAVCLVVAAVDRLFPKFSYKWLADEVERNLPRELDFLHEASNSRRC+
Sbjct:   57 MSDLHRRSAERLRDLCSVNGGVYVKLGQHLSQLDFVLPPEFIDVLRCMLDQAPQTPIEDVREVIREELGEYPETLWRTFDPKAIASASLAQVHRAEGWNGEQLAVKVQHRGLRETSKGDVDAVCLVVAAVDRLFPKFSYKWLADEVERNLPRELDFLHEASNSRRCS 223          
BLAST of mRNA_Ecto-sp13_S_contig767.18900.1 vs. uniprot
Match: W7TCN3_9STRA (Abc1 protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCN3_9STRA)

HSP 1 Score: 353 bits (906), Expect = 1.250e-112
Identity = 181/318 (56.92%), Postives = 229/318 (72.01%), Query Frame = 1
Query:   10 LHRRSAERLRDLCSVNGGVYVKLGQHLSQLDFVLPPEFIDVLRCMLDQAPQTPIEDVREVIREELGEYPETLWRTFDPKAIASASLAQVHRAEGWNGEQLAVKVQHRGLRETSKGDVDAVCLVVAAVDRLFPKFSYKWLADEVERNLPRELDFLHEASNSRRCAAMFEG-RSDICVPPVVSEQTAERVLTMKFEPGLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPDARRGSGR-PQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGDMYHLLAAILCGRS 957
            +++R A+RL +LC +N G Y+K+GQHLS LD++LP E  D L+ +L++AP +   DVR VI+EELG  PE LW +FDP  IASASLAQVH A   +G +LAVKVQHRGLRE S+GDV AV   V AV   FP+FSYKW++DE+   LP+ELDF++EA N+ R  A F+  R+D+ VP +V  QT  RVLTM FE G+ ATDV  +R  G+ L +VA LIS  FCEQ+F  G  HCDPH ANVL+R      +G  R P LVLLDHGLY+EL ++ R+D+  LWKA+V KD+PGVK YCQ+LN+G MY LLAAIL  RS
Sbjct:  340 VYQRMADRLLELCQLNLGCYIKIGQHLSNLDYLLPREITDTLKVLLNRAPVSSYPDVRAVIKEELGAPPEELWASFDPTPIASASLAQVHLATDASGRKLAVKVQHRGLRELSRGDVAAVSFFVNAVAAAFPEFSYKWISDELAPQLPKELDFVNEALNAERADAFFQRHRTDVVVPEIVWAQTRPRVLTMAFEEGVCATDVPALRERGLPLDKVAHLISSVFCEQVFSSGFAHCDPHPANVLIR---GGHKGDPRAPVLVLLDHGLYKELPDQLRLDYASLWKALVLKDLPGVKYYCQKLNAGRMYSLLAAILTSRS 654          
BLAST of mRNA_Ecto-sp13_S_contig767.18900.1 vs. uniprot
Match: A0A7S1DP73_HEMAN (Hypothetical protein (Fragment) n=3 Tax=Hemiselmis TaxID=77924 RepID=A0A7S1DP73_HEMAN)

HSP 1 Score: 330 bits (845), Expect = 3.110e-108
Identity = 171/316 (54.11%), Postives = 214/316 (67.72%), Query Frame = 1
Query:   10 LHRRSAERLRDLCSVNGGVYVKLGQHLSQLDFVLPPEFIDVLRCMLDQAPQTPIEDVREVIREELGEYPETLWRTFDPKAIASASLAQVHRAE-GWNGEQLAVKVQHRGLRETSKGDVDAVCLVVAAVDRLFPKFSYKWLADEVERNLPRELDFLHEASNSRRCAAMFEGRSDICVPPVVSEQTAERVLTMKFEPGLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPDARRGSGRPQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGDMYHLLAAILCGR 954
            +H+RSAERL DL   NGGVYVK+GQHLSQ+D+VLP EF  VLR  LD AP+T  E V EV++EELG  PE ++  F+   IASASLAQVH A     GE++AVKVQHRGLRET+ GDV+AV  VV  +  +FP     W+ADE+   LP EL+F +E  N  RC  MF+    + +P      + +RVLTM FE GL + D EG+  +GVS  R A+LISE FC QMF H  VHCDPH +N+LVR HP    G G PQLVLLDHGLYREL   F +++ RLWKA+VF D+  ++  CQ   +GDMY LLA+++  R
Sbjct:    7 VHKRSAERLLDLARANGGVYVKIGQHLSQMDYVLPEEFTTVLRACLDDAPRTEWEGVCEVVQEELGGAPEEVFEQFERVPIASASLAQVHVATLKGTGERVAVKVQHRGLRETAVGDVEAVSFVVRVLSTIFPSMPMWWVADELAPMLPIELNFDNERRNGDRCREMFQEDDRVVIPKFYPNLSTKRVLTMTFEEGLSSADAEGITGLGVSPERTAALISEVFCSQMFLHRFVHCDPHPSNLLVRRHPS---GGGSPQLVLLDHGLYRELDPDFVLEYSRLWKALVFGDVQAIRRQCQVFGAGDMYPLLASMIMAR 319          
BLAST of mRNA_Ecto-sp13_S_contig767.18900.1 vs. uniprot
Match: A9V7H6_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V7H6_MONBE)

HSP 1 Score: 319 bits (818), Expect = 3.960e-103
Identity = 152/315 (48.25%), Postives = 220/315 (69.84%), Query Frame = 1
Query:    1 MSDLHRRSAERLRDLCSVNGGVYVKLGQHLSQLDFVLPPEFIDVLRCMLDQAPQTPIEDVREVIREELGEYPETLWRTFDPKAIASASLAQVHRAEGWNGEQLAVKVQHRGLRETSKGDVDAVCLVVAAVDRLFPKFSYKWLADEVERNLPRELDFLHEASNSRRCAAMFEGRSDICVPPVVSEQTAERVLTMKFEPGLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPDARRGSGRPQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGDMYHLLAAIL 945
            M++ H ++A  LR L   NGG+Y+KLGQHL  LD+++P +++  ++   D+AP +  EDVR V++E+LG   ETL+ +FD   +ASASLAQVHRA   +G ++AVKVQH GLRE S GD+  V ++V    R+FP F+Y WL +E+++NLPREL+F+ EA+N+RRCAAM   R D+ +P +V + T+ RVLTM+F  G+  TDV  +RA  V +  ++  ++E F EQ+F HG VHCDPH  NVLV+       G GR ++VLLDHGLYREL E FR+++CRLW+A++  D  G++ +   +N+G+ Y L AA+L
Sbjct:   73 MANCHEQAAAILRQLFETNGGIYIKLGQHLGLLDYIIPEQYVKAMQVFFDRAPTSSYEDVRRVVQEDLGADIETLFSSFDFAPLASASLAQVHRAVLRDGREVAVKVQHWGLREDSVGDIYTVAVLVELTKRIFPDFNYTWLVEEIQKNLPRELNFVEEAANARRCAAMHADRHDVHIPEIVEDMTSSRVLTMEFCHGIPLTDVASIRAAKVDIAAISRTVTEMFSEQIFVHGRVHCDPHPGNVLVQAD-----GHGRARIVLLDHGLYRELPETFRLEYCRLWRAIIEGDAAGIERHATTMNAGEYYPLFAAML 382          
BLAST of mRNA_Ecto-sp13_S_contig767.18900.1 vs. uniprot
Match: A0A7S1YTP5_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YTP5_TRICV)

HSP 1 Score: 317 bits (813), Expect = 5.770e-103
Identity = 169/328 (51.52%), Postives = 221/328 (67.38%), Query Frame = 1
Query:    4 SDLHRRSAERLRDLCSVNGGVYVKLGQHLSQLDFVLPPEFIDVLRCMLDQAPQTPIEDVREVIREELGEYPETLWRTFDPKAIASASLAQVHRAEGWN--GEQLAVKVQHRGLRETSKGDVDAVCLVVAAVDRLFP-KFSYKWLADEVERNLPRELDFLHEASNSRRCAAMFEG-------RSD-ICVPPVVSEQTAERVLTMKFEPGLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPDARRGSGRPQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGDMYHLLAAILCGR 954
            S  HRR+A +L  LC  NGGVYVK+GQHL+ LD+++P E+I+ L  + D AP T  EDVREVIREELG YPE L+ +FDP  IASASLAQVH A      G +LAVKVQHRGLRETS+GD+ A+ L V  ++RLFP +F + W+ DE+  NLP EL+F +E +NS   A            R D + VP V  ++T+ERVLTM FE G +ATD+  +R  G+    V+ L+S AF  Q+FR G VHCDPH ANVL+R    A    G PQ+VL+DHGLYR + ++FRV + RLWK+++  D+ G+K+ C+ L   +MY LLAA+L  R
Sbjct:   15 SRTHRRAAHKLLTLCRANGGVYVKVGQHLANLDYLIPEEYIEALSKLFDDAPVTAYEDVREVIREELGSYPEALFSSFDPIPIASASLAQVHVATSKKDAGRKLAVKVQHRGLRETSRGDIVALTLAVRILERLFPDEFGWGWICDEIAPNLPVELNFRNEGTNSEIAAGHMRDHLRESGMREDAVVVPKVHWDETSERVLTMDFEEGFKATDLNSLRKSGLDTGDVSRLVSTAFHSQVFRSGFVHCDPHPANVLLR----ANAEDGTPQMVLVDHGLYRRIDDEFRVRYARLWKSLLVADVGGIKDSCRDLGVDEMYPLLAAMLTSR 338          
BLAST of mRNA_Ecto-sp13_S_contig767.18900.1 vs. uniprot
Match: A0A7S2YP80_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YP80_9STRA)

HSP 1 Score: 306 bits (785), Expect = 1.200e-99
Identity = 160/321 (49.84%), Postives = 209/321 (65.11%), Query Frame = 1
Query:    4 SDLHRRSAERLRDLCSVNGGVYVKLGQHLSQLDFVLPPEFIDVLRCMLDQAPQTPIEDVREVIREELGEYPETLWRTFDPKAIASASLAQVHRAEGWN-GEQLAVKVQHRGLRETSKGDVDAVCLVVAAVDRLFPKFSYKWLADEVERNLPRELDFLHEASNSRRCAAMFEGRSDICVPPVVS-EQTAERVLTMKFEPGLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRH--GSVHCDPHGANVLVRPHPDARRGSGRPQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGDMYHLLAAILCGR 954
            S +H+ +A RL  LC  NGGVY+K+GQHL+ LD++LP E+I  L  + D  PQT  EDV  VI E+LG  P  L+ +F+ + IASASLAQVH A     G +LA+KVQHRGLRETSKGD+ A+  VV   +R+FP FSY WLADE+  +LPRELDF++E  N+ R A   +     CV P +  + T  RVLTM+FE G +ATD + M    +    VA+L+S  F  Q+F    G VHCDPH ANV VR +      +G+PQLVLLDHGLYREL   FR+ + RLWK+++  D+ G+K  CQ L  G+ Y L AA++  R
Sbjct:   27 SAIHKAAASRLLKLCRQNGGVYIKIGQHLANLDYILPGEYISALSSLFDDTPQTSYEDVVAVIEEDLGGKPNELFASFEKEPIASASLAQVHVAYDLKTGRKLAIKVQHRGLRETSKGDIFALVSVVRMAERIFPDFSYGWLADEIAPHLPRELDFMNEGRNAERAAEYLQLTGLDCVVPKIDWKNTTARVLTMEFEKGFKATDTDAMDKANIKRRDVANLVSSVFSSQVFSGPTGFVHCDPHPANVSVRKNEK----TGKPQLVLLDHGLYRELDNDFRLSYARLWKSLMLADLKGIKNACQELGVGEAYPLFAAVILAR 343          
BLAST of mRNA_Ecto-sp13_S_contig767.18900.1 vs. uniprot
Match: A0A8J2S8Y1_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S8Y1_9STRA)

HSP 1 Score: 312 bits (799), Expect = 5.300e-99
Identity = 161/315 (51.11%), Postives = 208/315 (66.03%), Query Frame = 1
Query:   13 HRRSAERLRDLCSVNGGVYVKLGQHLSQLDFVLPPEFIDVLRCMLDQAPQTPIEDVREVIREELGEYPETLWRTFDPKAIASASLAQVHRAEGWNGEQLAVKVQHRGLRETSKGDVDAVCLVVAAVDRLFPKFSYKWLADEVERNLPRELDFLHEASNSRRCAAMFEGRSDICVPPVVSEQTAERVLTMKFEPGLRATDVEGMR-AMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPDARRGSGRPQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGDMYHLLAAILCGR 954
            H R+A RL  L   NGGVYVK+ QH +QLD++LPPE+       LD A ++  +DVR V++EELG  P+  +  F+ + IASASLAQVHRA  W G  +AVKVQHRGLRETS GD+      V    +LFP F  +W+ DE+  +LPRELDF+ EA+N RRCA  FE   D+ VP V  E T+ RVLTM +EPG+  T  + +R  +G+    VA+L+S AF    F  G VHCDPH ANVLVR  P     +GRPQLVLLDHGLYREL ++FR++  RLW+A+   D+PG++E  + L  GD+Y L AA+L  R
Sbjct:  141 HERNAARLLHLARANGGVYVKIAQHCAQLDYLLPPEYTTAFASCLDDAARSSWDDVRAVVKEELGAEPDEAFDAFEREPIASASLAQVHRAV-WKGRDVAVKVQHRGLRETSVGDLALCGAAVGVFGKLFPAFRMQWVVDEIAPHLPRELDFVAEAANCRRCAKTFERWPDVVVPEVFDEATSARVLTMSWEPGVNGTRKDEIRDELGLDPTAVAALVSTAFAFLTFHDGHVHCDPHAANVLVRASP-----AGRPQLVLLDHGLYRELDDEFRLEWARLWRALALADVPGIRESAEALGVGDLYPLFAAMLTQR 449          
BLAST of mRNA_Ecto-sp13_S_contig767.18900.1 vs. uniprot
Match: A0A7S1FRT5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FRT5_9STRA)

HSP 1 Score: 304 bits (779), Expect = 2.190e-97
Identity = 159/320 (49.69%), Postives = 206/320 (64.38%), Query Frame = 1
Query:   13 HRRSAERLRDLCSVNGGVYVKLGQHLSQLDFVLPPEFIDVLRCMLDQAPQTPIEDVREVIREELGEYPETLWRTFDPKAIASASLAQVHRAEGWN--GEQLAVKVQHRGLRETSKGDVDAVCLVVAAVDRLFPKFSYKWLADEVERNLPRELDFLHEASNSRRCAA-MFEG---RSDICVPPVVSEQTAERVLTMKFEPGLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHPDARRGSGRPQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPGVKEYCQRLNSGDMYHLLAAILCGR 954
            H R+A RLRDLC+ NGG YVK+GQHL+ LD++LP E+  VLR + D  P++   DVREV+REELG YPE L+  FD   IASASLAQVH A          AVKVQHRGLRE S GDV  V   V  V+R+F  F + WLA E+   L  ELDF  E  N+ R    M E      D  VP +  E TA RVL M +EPG ++TD+E ++  G+    ++ +IS  F +Q+F  G VHCDPH ANVL+RPHP  +   G+PQ+VL+DHGLY+E+ ++FR+ + RLW+AMV  DI  ++  C+ +   DMY LLAA+L  R
Sbjct:   66 HLRAARRLRDLCAANGGAYVKVGQHLAALDYLLPAEYNHVLRALFDDVPRSEYADVREVVREELGAYPEELFSRFDETPIASASLAQVHVAADKKDPARLYAVKVQHRGLRERSYGDVRVVRAAVGMVERMFQNFKFGWLASEIAPQLLYELDFTREGKNAERAERHMREAGIKEDDCIVPKIYWEYTAPRVLCMSYEPGFKSTDMEAIQKAGLRPRDISKIISSVFNKQIFHSGFVHCDPHPANVLLRPHPHKK---GKPQMVLVDHGLYKEIDDRFRLAYARLWQAMVLADIDAIRSICETMGVRDMYPLLAAMLTAR 382          
BLAST of mRNA_Ecto-sp13_S_contig767.18900.1 vs. uniprot
Match: A0A3B6HWI5_WHEAT (ABC1 domain-containing protein n=14 Tax=Triticeae TaxID=147389 RepID=A0A3B6HWI5_WHEAT)

HSP 1 Score: 305 bits (782), Expect = 4.670e-97
Identity = 157/328 (47.87%), Postives = 222/328 (67.68%), Query Frame = 1
Query:    7 DLHRRSAERLRDLCSVNGGVYVKLGQHLSQLDFVLPPEFIDVLR-CMLDQAPQTPIEDVREVIREELGEYPETLWRTFDPKAIASASLAQVHRAEGWNGEQLAVKVQHRGLRETSKGDVDAVCLVVAAVDRLFPKFSYKWLADEVERNLPRELDFLHEASNSRRCAAMFEGRS-----DICVPPVVSEQTAERVLTMKFEPGLRATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHP-DARR----GSGRPQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPGVKEYCQRLNSG-DMYHLLAAILCGR 954
            D H RSA RL++LC  NGG+Y+KLGQH++QL++VLP E++  +R  ML + P +  EDVR V ++E+GE PET++  FDP  IASASLAQVH A   +G+++AVKVQH  L +TS  D+  V LVV A++ +FP F Y+WL DE+  + P+ELDFL EA NS RC   F   S      IC P V    +  R+LTM++      TDV+G++ +G+    V++L+++AF E +F+HG VHCDPH AN+++RP P D+++    GS RPQLVLLDHGLY+EL    R+++  LWKA++  D  G+KEY  +L +G D++ L A +L  R
Sbjct:   75 DAHLRSANRLQELCFRNGGIYIKLGQHIAQLEYVLPQEYVQTMRESMLKRCPVSSYEDVRGVFKKEIGELPETVFAEFDPVPIASASLAQVHAATTHDGKKVAVKVQHDHLLDTSVIDIATVDLVVNALNYIFPTFDYRWLVDEIRESAPKELDFLCEAQNSERCLVNFRKLSPHIANSICTPKVYWNLSTSRILTMEYIDAKEVTDVKGIKDLGIRPVDVSNLVNKAFAEMIFKHGFVHCDPHAANMMIRPLPQDSKKWFVLGSKRPQLVLLDHGLYKELDHATRINYASLWKALLRADQNGIKEYSIKLGAGEDLHALFAGVLTMR 402          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig767.18900.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLF6_ECTSI1.190e-23099.06ABC1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KV11_9PHAE3.620e-11499.40ABC1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
W7TCN3_9STRA1.250e-11256.92Abc1 protein n=2 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A7S1DP73_HEMAN3.110e-10854.11Hypothetical protein (Fragment) n=3 Tax=Hemiselmis... [more]
A9V7H6_MONBE3.960e-10348.25Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A7S1YTP5_TRICV5.770e-10351.52Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S2YP80_9STRA1.200e-9949.84Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A8J2S8Y1_9STRA5.300e-9951.11Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]
A0A7S1FRT5_9STRA2.190e-9749.69Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A3B6HWI5_WHEAT4.670e-9747.87ABC1 domain-containing protein n=14 Tax=Triticeae ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig767contigEcto-sp13_S_contig767:17610..21775 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score652.9
Seed ortholog evalue7.7e-185
Seed eggNOG ortholog2880.D8LLF6
Model size957
KEGG koko:K08869
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005215
Exons7
EggNOG free text desc.regulation of tocopherol cyclase activity
EggNOG OGsCOG0661@1,KOG1235@2759
Cds size957
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig767.18900.1prot_Ecto-sp13_S_contig767.18900.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig767 17610..21775 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464037.3034785-CDS-Ecto-sp13_S_contig767:17609..177621681464037.3034785-CDS-Ecto-sp13_S_contig767:17609..17762Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig767 17610..17762 +
1681464037.3148813-CDS-Ecto-sp13_S_contig767:18321..184861681464037.3148813-CDS-Ecto-sp13_S_contig767:18321..18486Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig767 18322..18486 +
1681464037.3239346-CDS-Ecto-sp13_S_contig767:19318..194941681464037.3239346-CDS-Ecto-sp13_S_contig767:19318..19494Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig767 19319..19494 +
1681464037.3331125-CDS-Ecto-sp13_S_contig767:19948..200451681464037.3331125-CDS-Ecto-sp13_S_contig767:19948..20045Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig767 19949..20045 +
1681464037.3443034-CDS-Ecto-sp13_S_contig767:20460..205531681464037.3443034-CDS-Ecto-sp13_S_contig767:20460..20553Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig767 20461..20553 +
1681464037.3578653-CDS-Ecto-sp13_S_contig767:20911..211071681464037.3578653-CDS-Ecto-sp13_S_contig767:20911..21107Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig767 20912..21107 +
1681464037.3715901-CDS-Ecto-sp13_S_contig767:21698..217751681464037.3715901-CDS-Ecto-sp13_S_contig767:21698..21775Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig767 21699..21775 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig767.18900.1

>prot_Ecto-sp13_S_contig767.18900.1 ID=prot_Ecto-sp13_S_contig767.18900.1|Name=mRNA_Ecto-sp13_S_contig767.18900.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=319bp
MSDLHRRSAERLRDLCSVNGGVYVKLGQHLSQLDFVLPPEFIDVLRCMLD
QAPQTPIEDVREVIREELGEYPETLWRTFDPKAIASASLAQVHRAEGWNG
EQLAVKVQHRGLRETSKGDVDAVCLVVAAVDRLFPKFSYKWLADEVERNL
PRELDFLHEASNSRRCAAMFEGRSDICVPPVVSEQTAERVLTMKFEPGLR
ATDVEGMRAMGVSLPRVASLISEAFCEQMFRHGSVHCDPHGANVLVRPHP
DARRGSGRPQLVLLDHGLYRELTEKFRVDHCRLWKAMVFKDIPGVKEYCQ
RLNSGDMYHLLAAILCGRS
back to top

mRNA from alignment at Ecto-sp13_S_contig767:17610..21775+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig767.18900.1 ID=mRNA_Ecto-sp13_S_contig767.18900.1|Name=mRNA_Ecto-sp13_S_contig767.18900.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4166bp|location=Sequence derived from alignment at Ecto-sp13_S_contig767:17610..21775+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCGGACCTGCACCGGCGGTCGGCGGAGCGCCTCCGCGACCTGTGCAG CGTCAACGGAGGCGTGTACGTGAAGCTGGGGCAGCACCTGAGCCAGCTCG ACTTCGTCCTGCCGCCCGAGTTCATAGACGTTTTGAGGTGTATGTTGGAC CAGGTGAGCTCCGGGGGGTGGAGGAGGGGCTCCGTGGGTGCTTGCGTTCA TCGTTCGACCACTAACCTCGCACAGTCACTGCGGGAGAGATTATCGTTCC CACACACCTACCTGCCAGAGACACACCTAGCATGCCGGTGCTCTTATCCG GGGAAGGGGTGAGGTTGCGTTCGTCTTCCGCCAGGGAAAGGTACATGTTG GGAGCACGGGGGCAGTAGCAGCTGGTCATGGACTTTGTGCGTTTCGGTAG TGTGGTCATTCGGGAAGCAAAGCATTGATGGTAGCGGCGGTGTTGGTTCG CCCTCGTTTTCCTGGTTCGTTGGGTAGACGGTTCGGTATCACGTTTGTTT TTGTTCCTTGGATTGGACTCCGCCGACATGCGTGTGCGCATCGAATTACT GCGCACACACATGTGATTTCGATGAAGATGGTTGATCCACACCATCAGCA CCATCATCATGATCTTGCTAATTGCTTTTAAATTTTCGTTGGCCTTTGTC CTGGCGCCCTCAACCGTCCCCTACTTCCTGTTCCTTCCCGCCCCCCTTTC TCGCGGAGGCAGGCGCCTCAAACCCCCATAGAAGACGTGCGAGAGGTTAT TCGAGAGGAGCTGGGCGAGTACCCCGAGACTCTCTGGCGGACCTTCGACC CGAAGGCGATAGCGTCGGCATCGTTGGCGCAGGTGCACCGCGCGGAGGGC TGGAACGGAGAGCAGTTAGCTGTGAAGGTGCGCGGTGAACGGGGGGGGGA AGGGTACTCACGCCCTAGCGATTAACCATTGATCACGCATCTCATACGAG ACGGACAACCGTTCCCACTCGTAGTAGAGACACCTACCTCCACGTGCCTG GTTCTCTGTAGCGGTGCGCTGCGCGGGAGGGTGAAAAAGTCTCCGTTTGA GGCGCGAGAAAGAAGGGTTGGAAGGTTGGGGGTACCGCTTTCGCGTGCTT GGTCTAGCCAAATCGGAGGAGAGAGAGCGGGGCAAAGGGGATGGGACCGG GGGGCAGGGAGGAGGGATGGGGGTTGATTTTCCCAAGGAGGCTGAAGATG TAGTGGTCTCCAAGACTAATGTTTGTGTTGACAAGCGTTTTCTTAGTAGA CACGATGCCGCCTTTTGTCGTCTACACCGATGGAATTATGAAGCAAAGAC AAGAAGAATTATCGGCTGCATACACCAGGGCTGGGCCCGATATAGCACCG GCATGTGCCCAAAGGTATGACCGGCACTGTACCGGACACCGATACTGTTC AGAACAGGATTTTATCGGGTTTAGTATTTTAGATAAAACACTTACCCACT ATGCTACTCAGTCAGCGCTGATAAAGAAGCATGGTGGATAAGTCTTAGTC TAACATAGTTTAGGAATGTATACTCGTGCCCAGAGACTACTTGACGGGTA TTATACCGGGCACCGGCACTATTGAACTGGCGCTATATCGGGCCCATCAT TGTACAGTAGTACACCCGGAAGACCCCGCCGCCGCCGCCCCCGCGCGCGC GCTGTACCGCTTGGGGGGGGGGGGATTTGTACCTGCTCATCCGCAACAAA CAAACGCAGGTTCAGCACCGAGGCCTCCGGGAGACGTCGAAGGGCGACGT CGACGCCGTGTGCCTGGTGGTCGCGGCCGTGGACAGGCTGTTCCCCAAGT TCTCGTACAAGTGGCTCGCGGACGAGGTGGAGAGGAACCTTCCCCGAGAA CTCGACTTCCTTCACGAGGCCAGCAACAGCCGCAGGTGCAGTCGGGTCGG GTAGAGGGGACAGACAAGCAAGAACCGGGGGGAGAGGGGGGTACTCGTGT TTTGCATGCCTTAGCTGTCAGACCATTGACGCGGGGGAGGGGGAGGTCTC AAGTGTTTTGCTCTCCTCCTCCTTGATTGGCTGTCGACTATGCGTCGTCG TGCCCGTTGGGATTGAATGGGGGGGCAGGAGGCAGGTCTGGGGGCAGTGG GACGGCGAGGGGGGCAGGTTTACGGGAGGAAAGTGTAGCAAATGTACAAG ACAATCCGGTGGAAATACTGTCGCGAGGTTATATTAGTATGAAAGATTTG AGAGGGAAAGGGACGGTGGAAATTTCCCCGCGTCGCACGGCCTTTGGTGT TCAATGTGACTTCGTAGTATTTCTTTTTCTCGGCGTTTTTCGACCATCCG ACCAAATGTGTTTTGTGGCTCCTGGGCTCTTCATCATAGGTGCGCGGCGA TGTTTGAAGGGCGGAGTGACATCTGCGTGCCCCCCGTCGTGAGCGAGCAG ACGGCTGAGAGGGTGCTCACCATGAAGTTCGAGCCGGTGAGCAGCGCCAA AATGAAGTTTCAGCTGATCGTACAGCGCTGATCATTTTGTCTGTGGATAG ATACTGCTCTTCCGCGAGCGCGACTACCGCCGCCGACGCATGTTTGCGCT GGTCCCGCTGAGACGGCTACAAACACGGACAAGGGCGTGGCGAGAGAGTG GGGGGGGGGGGCATGAGGGGAGAACCAAGTGAGGGATGTGCGCTTCGACA TGTGTATGTAGGGACTAAGTGATTGTTGGAGGTACACCGAGAAACACAGG GCAGTAACCTCTATCTGACCAGAGGATCACAGCGAGTGCCAATATTCCGA ATTAAATTAGCAGAGCATTGATCGTTTCTGGTCGACCCCCCCCCCCTTCC CCCCCGCCGCACTGCGCGCGCAAATGGTACGGTGCTGCAAAACCCGGACA GGGGTTGCGAGCGACGGACGTGGAAGGCATGCGCGCGATGGGGGTCAGCC TTCCGAGGGTGGCATCCCTCATCAGCGAGGCCTTCTGCGAGCAGGTTAGG CCTTCTGCCAAACAACCGTCTCATCAGAAAGTTGATCAGAAGGCGCGGGG GACACACGACGCCAAGGGAGCGTCAGATTTTTCACCTCAGCCGTGGGAAC GAAGACTGGTGCTCTTGCTTTTTTGTTGGTCTCCGTGGAGGCGTTACTGT TCCCAGCGCAAGTTTTTACCCTCCCTTGGCACAGCAAACCCAAGAATAGT GCCTGCTTGGTTCATCCTTGTGAAACGTAGCCTGGGCCAGCGAAAACCCG GCATGCCGCTCCGTCCCGGCACTGTAGGGGTGCGAGGTCAATGGTCTAAC GACTACAGCACTGCTCGACTATGAGTACGCCCACCCCCCACGTCCTCATC AGATGTTTCGCCATGGCTCGGTCCACTGCGACCCTCACGGCGCGAACGTT CTGGTGAGACCGCACCCGGACGCAAGGCGGGGGTCAGGGCGCCCGCAGCT GGTCCTGCTCGATCACGGGCTGTACAGGGAGCTGACGGAGAAGTTCAGGG TGGACCACTGCAGGCTGTGGAAGGCGATGGTGTTCAAGGATATTCCAGGT GGGACAACGCGAAGGGGAGAGGGAAGGGGGGTGGGGGGGCAGGCTGTTTT TCGCTTGCCTCAGCCTCGTGGGACCCTGTATCTGATTTTTCGTCTTCAAA CGATTGGACGAAGCAATACCGAACGTTTCTGTCCGGGTGGGGTCGAGTCA CTCTCCTGAAGCCCTTCGCGCGTCGAGCGGTAAGTTTATCGTGCGCGAGT TTTCGCCTGTGTGCTTGCTCAGCTGCACTCTTCATGGTTCCGGGATTTTT TTCCCCTTTCGATCGGTTGTGCCGGCAGCACCATCGAGAGTCGACATGGC ACGGTGCCGCGCAGCAGTGGTAGTCGTCCTTAACAAACCAAAACTTCTCG TGGCACTCGGTTAAACTGCCGCAGCTACACGCGTAGGTGCCATGGTAGGT GCCTGCTACGGAAAAACGTCGAGGAAAGGCAAGCGACTCCAATTTAACAC AACCTCCATCTACGTACGGGGCGAACGAAAGTATCCATACACCGGTTGGA TGATGCGCATCCGTGTGTGTGTGGCACTTCTGTAGCATCCATAAATAATT CGCATGCGTCTACGTGTCAAACATGTTTTGATACTGCAGGGGTGAAGGAA TACTGCCAGCGGCTCAACTCCGGCGACATGTATCACCTGCTGGCGGCCAT CTTGTGCGGAAGGTCG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig767:17610..21775+

>mRNA_Ecto-sp13_S_contig767.18900.1 ID=mRNA_Ecto-sp13_S_contig767.18900.1|Name=mRNA_Ecto-sp13_S_contig767.18900.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=957bp|location=Sequence derived from alignment at Ecto-sp13_S_contig767:17610..21775+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCGGACCTGCACCGGCGGTCGGCGGAGCGCCTCCGCGACCTGTGCAG
CGTCAACGGAGGCGTGTACGTGAAGCTGGGGCAGCACCTGAGCCAGCTCG
ACTTCGTCCTGCCGCCCGAGTTCATAGACGTTTTGAGGTGTATGTTGGAC
CAGGCGCCTCAAACCCCCATAGAAGACGTGCGAGAGGTTATTCGAGAGGA
GCTGGGCGAGTACCCCGAGACTCTCTGGCGGACCTTCGACCCGAAGGCGA
TAGCGTCGGCATCGTTGGCGCAGGTGCACCGCGCGGAGGGCTGGAACGGA
GAGCAGTTAGCTGTGAAGGTTCAGCACCGAGGCCTCCGGGAGACGTCGAA
GGGCGACGTCGACGCCGTGTGCCTGGTGGTCGCGGCCGTGGACAGGCTGT
TCCCCAAGTTCTCGTACAAGTGGCTCGCGGACGAGGTGGAGAGGAACCTT
CCCCGAGAACTCGACTTCCTTCACGAGGCCAGCAACAGCCGCAGGTGCGC
GGCGATGTTTGAAGGGCGGAGTGACATCTGCGTGCCCCCCGTCGTGAGCG
AGCAGACGGCTGAGAGGGTGCTCACCATGAAGTTCGAGCCGGGGTTGCGA
GCGACGGACGTGGAAGGCATGCGCGCGATGGGGGTCAGCCTTCCGAGGGT
GGCATCCCTCATCAGCGAGGCCTTCTGCGAGCAGATGTTTCGCCATGGCT
CGGTCCACTGCGACCCTCACGGCGCGAACGTTCTGGTGAGACCGCACCCG
GACGCAAGGCGGGGGTCAGGGCGCCCGCAGCTGGTCCTGCTCGATCACGG
GCTGTACAGGGAGCTGACGGAGAAGTTCAGGGTGGACCACTGCAGGCTGT
GGAAGGCGATGGTGTTCAAGGATATTCCAGGGGTGAAGGAATACTGCCAG
CGGCTCAACTCCGGCGACATGTATCACCTGCTGGCGGCCATCTTGTGCGG
AAGGTCG
back to top