mRNA_Ecto-sp13_S_contig7647.18865.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7647.18865.1 vs. uniprot
Match: D7FQD4_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQD4_ECTSI) HSP 1 Score: 390 bits (1001), Expect = 6.510e-136 Identity = 204/221 (92.31%), Postives = 207/221 (93.67%), Query Frame = 1
Query: 73 MASRITESKLQEISDCFNEFSDNKNYLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDVFVESMGRRLALIDPAEELRQIFKAFDRGCRGFITRDDLRQVLSEVFSESEMPPVKVAEMFSEADWDGSGRVGTRSYWIPTIREHDDQPASYGAGTAKGTQPQASLLKWAQRTVSQPETKKHGALVGEEVDEASTLLYSAFFPLSSSSSTSA 735
MASRITESKLQEISDCFNEFSDNK+YLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRD+FVESMGRRLAL+DPAEELRQIFKAFDRGCRGFITRDDLRQVLSEVFSESEMPPVKVAEMFSEADWDGSGRV WIPTIREHDDQPAS GAGTAKGT PQASLL AQRTVSQPETKKHGALVGEEVDEASTLL SAFFPL S S SA
Sbjct: 1 MASRITESKLQEISDCFNEFSDNKSYLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDMFVESMGRRLALVDPAEELRQIFKAFDRGCRGFITRDDLRQVLSEVFSESEMPPVKVAEMFSEADWDGSGRVD----WIPTIREHDDQPASNGAGTAKGTPPQASLLNRAQRTVSQPETKKHGALVGEEVDEASTLLCSAFFPLFSWCSPSA 217
BLAST of mRNA_Ecto-sp13_S_contig7647.18865.1 vs. uniprot
Match: A0A6H5JF19_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF19_9PHAE) HSP 1 Score: 149 bits (376), Expect = 7.090e-43 Identity = 72/75 (96.00%), Postives = 75/75 (100.00%), Query Frame = 1
Query: 268 MSRDVFVESMGRRLALIDPAEELRQIFKAFDRGCRGFITRDDLRQVLSEVFSESEMPPVKVAEMFSEADWDGSGR 492
MSRD+FVESMGRRLAL+DPAE+LRQIFKAFDRGCRGFITRDDLRQVLSEVFSESEMPPVKVAEMFSEADWDGSGR
Sbjct: 1 MSRDMFVESMGRRLALVDPAEDLRQIFKAFDRGCRGFITRDDLRQVLSEVFSESEMPPVKVAEMFSEADWDGSGR 75
BLAST of mRNA_Ecto-sp13_S_contig7647.18865.1 vs. uniprot
Match: A0A7M7HGX1_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7HGX1_STRPU) HSP 1 Score: 103 bits (256), Expect = 4.040e-24 Identity = 55/135 (40.74%), Postives = 84/135 (62.22%), Query Frame = 1
Query: 109 ISDCFNEFS-DNKNYLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDVFVESMGRRLALIDPAEELRQIFKAFDRGCRGFITRDDLRQVLSEVFSESEMPPVKVAEMFSEADWDGSGRVGTRSY 510
+ FNE D K +L ++DLKVAV L+G++PSKF+V +++ ++ PGM+ + F+ +M +LA +DP E +RQIF AFD CRGF+T +D+ + V + + P +V + FSE D DG GRV R +
Sbjct: 2 LESTFNECDEDEKGFLSREDLKVAVVRLIGYKPSKFEVDELM-----KNIDGPGMTSNEFISAMKPKLAALDPDEHIRQIFVAFDSKCRGFLTMEDVEKACKLVAPK--IQPHRVQKAFSELDGDGDGRVSYRDF 129
BLAST of mRNA_Ecto-sp13_S_contig7647.18865.1 vs. uniprot
Match: UPI001402C7B1 (EF-hand calcium-binding domain-containing protein 11 n=1 Tax=Amblyraja radiata TaxID=386614 RepID=UPI001402C7B1) HSP 1 Score: 101 bits (252), Expect = 2.440e-23 Identity = 59/153 (38.56%), Postives = 85/153 (55.56%), Query Frame = 1
Query: 55 YPIPEEMASRITESKLQEISDCFNEFSDNKN-YLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDVFVESMGRRLALIDPAEELRQIFKAFDRGCRGFITRDDLRQVLSEVFSESEMPPVKVAEMFSEADWDGSGRVGTRSY 510
YP P E R+T+S+ + F E +++ YL ++DLKVAV ++ G++PSK + ML + ED PG+ D F M +LA +DP EE RQIF AFD CR F+T +D ++ ++V + V E F E D D GRV R +
Sbjct: 2 YPQPREQR-RVTDSEKSRCAAVFRECDSSRSGYLSREDLKVAVVSMFGYKPSKMETD-MLMTSVPEDNHLPGLPLDQFTSLMCSKLAAMDPYEESRQIFSAFDVHCRSFLTVEDFKRAFAKVAPH--LSEQTVLEAFREVDRDSDGRVSFRDF 150
BLAST of mRNA_Ecto-sp13_S_contig7647.18865.1 vs. uniprot
Match: A0A8C9RT06_SCLFO (EF-hand calcium binding domain 11 n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9RT06_SCLFO) HSP 1 Score: 101 bits (251), Expect = 4.130e-23 Identity = 54/144 (37.50%), Postives = 82/144 (56.94%), Query Frame = 1
Query: 82 RITESKLQEISDCFNEFSDN-KNYLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDVFVESMGRRLALIDPAEELRQIFKAFDRGCRGFITRDDLRQVLSEVFSESEMPPVKVAEMFSEADWDGSGRVGTRSY 510
+IT+S ++ + F + + K YL ++DLKVAV L G++PSK + ++ D PG+ D+FV MGR+L+++DP E+ R IF AFD CRGF+T +D R+ S V +P + E F E D D G + R +
Sbjct: 14 KITDSDKKKFAMVFQQCDEGRKGYLSREDLKVAVVQLFGYKPSKMETNSLMEPVLKAD--LPGVPLDLFVSLMGRKLSVLDPYEKTRHIFNAFDAHCRGFLTLEDFRRAFSRVAPR--LPDRTIQEAFREVDRDSDGHISFRDF 153
BLAST of mRNA_Ecto-sp13_S_contig7647.18865.1 vs. uniprot
Match: UPI001EEC951A (EF-hand calcium-binding domain-containing protein 11 isoform X6 n=4 Tax=Silurus meridionalis TaxID=175797 RepID=UPI001EEC951A) HSP 1 Score: 99.0 bits (245), Expect = 3.350e-22 Identity = 56/145 (38.62%), Postives = 83/145 (57.24%), Query Frame = 1
Query: 82 RITESKLQEISDCFNEFS-DNKNYLDKDDLKVAVTALLGFRPSKFDVQQML-ALATAEDPQCPGMSRDVFVESMGRRLALIDPAEELRQIFKAFDRGCRGFITRDDLRQVLSEVFSESEMPPVKVAEMFSEADWDGSGRVGTRSY 510
RIT + ++ F++ + K+YL ++DLK+AV L G++PSK + ML A AT P CPG+S + FV MGR+L+ DP E+ R+IF+AFD CRGF+ +D R + V +P V E F D D G + + +
Sbjct: 16 RITAADRRKFVSVFDQCDVEKKSYLSREDLKIAVVMLFGYKPSKSETSMMLEACAT---PNCPGVSLEQFVSLMGRKLSAGDPYEKTRRIFRAFDLHCRGFLKVEDFRSAFARVVPR--LPERTVLEAFRHVDHDSDGHISFKDF 155
BLAST of mRNA_Ecto-sp13_S_contig7647.18865.1 vs. uniprot
Match: UPI001BB1A9ED (EF-hand calcium-binding domain-containing protein 11-like isoform X1 n=3 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB1A9ED) HSP 1 Score: 97.1 bits (240), Expect = 1.370e-21 Identity = 57/148 (38.51%), Postives = 87/148 (58.78%), Query Frame = 1
Query: 70 EMASRITESKLQEISDCFNEFS-DNKNYLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDVFVESMGRRLALIDPAEELRQIFKAFDRGCRGFITRDDLRQVLSEVFSESEMPPVKVAEMFSEADWDGSGRVGTRSY 510
E SR E Q+ F++ DNK +L ++D+KVAV L G++PSKF+V +++ ++ PGM+ + F +M +LA DP E++RQIF AFD CRGF+T +D+ + V + + P + + FSE D DG GRV R +
Sbjct: 3 EAVSRDPEFPGQDHVTIFHDVDEDNKGFLSREDVKVAVVRLFGYKPSKFEVDELM-----KNIDGPGMTLNEFKSAMKPKLAAQDPDEKIRQIFVAFDSKCRGFLTLEDVEKACKLVAPK--IQPHHIQKAFSELDGDGDGRVSYRDF 143
BLAST of mRNA_Ecto-sp13_S_contig7647.18865.1 vs. uniprot
Match: W5MRE1_LEPOC (EF-hand calcium binding domain 11 n=1 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5MRE1_LEPOC) HSP 1 Score: 95.9 bits (237), Expect = 4.680e-21 Identity = 54/155 (34.84%), Postives = 85/155 (54.84%), Query Frame = 1
Query: 82 RITESKLQEISDCFNEFSDNKN-YLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDVFVESMGRRLALIDPAEELRQIFKAFDRGCRGFITRDDLRQVLSEVFSESEMPPVKVAEMFSEADWDGSGRVGTRSYWIPTIREHDDQ 543
+I+E+ +++ + F + ++K YLD++DLK+A+ L G++PSK + L L PG+ D F+ MGR+L++ DP E+ RQIF AFD CRGF+T +D R+ S V + + V E F E D D G + + DD+
Sbjct: 14 KISETDIKKFTSVFQQCDESKKGYLDREDLKIAIVMLFGYKPSKSETD--LLLHPVLQANLPGVPLDHFINLMGRKLSVQDPFEKTRQIFTAFDVHCRGFLTLEDFRKAFSSV---AHLQDQTVQEAFREVDRDSDGHISFKDLESVLTYGQDDR 163
BLAST of mRNA_Ecto-sp13_S_contig7647.18865.1 vs. uniprot
Match: UPI0014553593 (EF-hand calcium-binding domain-containing protein 11-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014553593) HSP 1 Score: 95.9 bits (237), Expect = 5.180e-21 Identity = 50/125 (40.00%), Postives = 77/125 (61.60%), Query Frame = 1
Query: 136 DNKNYLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDVFVESMGRRLALIDPAEELRQIFKAFDRGCRGFITRDDLRQVLSEVFSESEMPPVKVAEMFSEADWDGSGRVGTRSY 510
D K Y+ + DLKVA+ L G++PSK++V QM++ +T+ + G+ +D F+ +M ++A D EE+RQ F FD CRGFIT +DL + +EV + P ++ +F E D DG GRV R +
Sbjct: 37 DKKGYMSRQDLKVAMVILFGYKPSKYEVDQMMSGSTSSE----GVMQDHFMSAMESKMAAQDLDEEIRQTFMTFDTHCRGFITLEDLYKAFNEVAPHT--PRHRIDSLFREIDRDGDGRVSYRDF 155
BLAST of mRNA_Ecto-sp13_S_contig7647.18865.1 vs. uniprot
Match: A0A7J6ANS1_AMEME (Uncharacterized protein n=1 Tax=Ameiurus melas TaxID=219545 RepID=A0A7J6ANS1_AMEME) HSP 1 Score: 95.5 bits (236), Expect = 6.230e-21 Identity = 49/125 (39.20%), Postives = 69/125 (55.20%), Query Frame = 1
Query: 136 DNKNYLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDVFVESMGRRLALIDPAEELRQIFKAFDRGCRGFITRDDLRQVLSEVFSESEMPPVKVAEMFSEADWDGSGRVGTRSY 510
D K YL ++D+KVAV L G++PSK + ++ P CPG+ + FV MGR+L+ DP E+ RQIF AFD CRGF+ +D R V + V +P V E F D D G + + +
Sbjct: 30 DKKGYLSREDVKVAVVMLFGYKPSKSETSMLMEAGAV--PTCPGVPLEQFVSLMGRKLSAGDPYEKTRQIFSAFDLHCRGFLKLEDFRSVFARVAPR--LPERTVLEAFRHVDHDSDGHISFKDF 150 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7647.18865.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7647.18865.1 >prot_Ecto-sp13_S_contig7647.18865.1 ID=prot_Ecto-sp13_S_contig7647.18865.1|Name=mRNA_Ecto-sp13_S_contig7647.18865.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=222bp MASRITESKLQEISDCFNEFSDNKNYLDKDDLKVAVTALLGFRPSKFDVQback to top mRNA from alignment at Ecto-sp13_S_contig7647:1499..7063- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7647.18865.1 ID=mRNA_Ecto-sp13_S_contig7647.18865.1|Name=mRNA_Ecto-sp13_S_contig7647.18865.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5565bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7647:1499..7063- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7647:1499..7063- >mRNA_Ecto-sp13_S_contig7647.18865.1 ID=mRNA_Ecto-sp13_S_contig7647.18865.1|Name=mRNA_Ecto-sp13_S_contig7647.18865.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=666bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7647:1499..7063- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |