mRNA_Ecto-sp13_S_contig7570.18770.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7570.18770.1 vs. uniprot
Match: A0A6H5KHX0_9PHAE (FAPb protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHX0_9PHAE) HSP 1 Score: 512 bits (1319), Expect = 7.920e-174 Identity = 335/358 (93.58%), Postives = 339/358 (94.69%), Query Frame = 1
Query: 1 MPSREVGNLAVAAAFALFSAFLFFGRDEAGAWRENFLYLPIGGSTAPIASNSEPYVPAVHLAGVTGDGNSKEPPVASEPXXXXXXXXXXXXXXXESXXXXXXXX-AEAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAKTPLSPDVRDPATGLVLPRTKQFASSKTGLICLGVGVRVKSVAFVTVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSIDREESVTLGWEGKDRLVVLVRDKEIGSVVDETLPASVFSLFLGSDPVSPVAKTAFAEGVPPFLAS 1071
MPSREVGNLAVAAAFALFSAFLFF RDEAGAWRENFL LPIGGSTAPIASNS+PYVPAVHLAGVTGDGNSK PPVASE XXXXXXXXXXXXXXX XXXXXXXX AEAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GLAKTPLSPDVRDPATGLVLPRTKQFASSKTGL+CLGVGVRVKSVAFVTVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSIDREESVTLGWEGKDRLVVLVRDKEIGS++DE LPASVFSLFLGSDPVSPVAKTAFAEGVPPFLAS
Sbjct: 1 MPSREVGNLAVAAAFALFSAFLFFARDEAGAWRENFLNLPIGGSTAPIASNSDPYVPAVHLAGVTGDGNSKGPPVASESXXXXXXXXXXXXXXXXXXXXXXXXXXAEAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------GLAKTPLSPDVRDPATGLVLPRTKQFASSKTGLVCLGVGVRVKSVAFVTVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSIDREESVTLGWEGKDRLVVLVRDKEIGSIIDEALPASVFSLFLGSDPVSPVAKTAFAEGVPPFLAS 347
BLAST of mRNA_Ecto-sp13_S_contig7570.18770.1 vs. uniprot
Match: D7G2G9_ECTSI (Similar to Chalcone Isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2G9_ECTSI) HSP 1 Score: 389 bits (999), Expect = 1.420e-127 Identity = 200/207 (96.62%), Postives = 205/207 (99.03%), Query Frame = 1
Query: 451 GLAKTPLSPDVRDPATGLVLPRTKQFASSKTGLICLGVGVRVKSVAFVTVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSIDREESVTLGWEGKDRLVVLVRDKEIGSVVDETLPASVFSLFLGSDPVSPVAKTAFAEGVPPFLAS 1071
GLAKTPLSPDVRDPATGLVLPRTKQFASSKTGL+CLGVGVRVKSVAFV VNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSI+REESVTLGWEGKDRLVVLVRDKEIGSV+DE+LPASVF+LFLGSDPVSPVAKTAFAEGVP FLAS
Sbjct: 23 GLAKTPLSPDVRDPATGLVLPRTKQFASSKTGLVCLGVGVRVKSVAFVNVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSINREESVTLGWEGKDRLVVLVRDKEIGSVIDESLPASVFNLFLGSDPVSPVAKTAFAEGVPAFLAS 229
BLAST of mRNA_Ecto-sp13_S_contig7570.18770.1 vs. uniprot
Match: A0A835ZC45_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC45_9STRA) HSP 1 Score: 157 bits (398), Expect = 2.650e-37 Identity = 95/215 (44.19%), Postives = 122/215 (56.74%), Query Frame = 1
Query: 457 AKTPLSPD-VRDPATGLVLPRTKQFASSKTGLICLGVGVRVKSVAFVTVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFT-AVKGVNQDVLDKFSSLTMEGVGKSIDREESVTLGWEGKDRLVVLVRDKEIGSVVDETLPASVFS--------------LFLGSDPVSPVAKTAFAEGV 1053
A+T PD + +P TG+ L T F S L C+G G RVKSVA +V VY + LYVEP GA +AL Y G P E ++D Y L F YL + FAR+VG KVV+A T AV+GV DVL F+ + +G S+ + + V +GWEG+ RL V+VR +G V D LP ++F L+LGSDPVSP AK AFA GV
Sbjct: 314 ARTSTMPDTIVEPVTGIALAATASFGGSAQ-LRCVGAGARVKSVALASVKVYALALYVEPGGAARALARYEGVAPAERARDVGFYEELMKPAAFPSYLVMSFARNVGTPKVVEALTSAVQGVAPDVLKNFAGMLGAAMGPSMRKGDVVAMGWEGEGRLAVVVRGVRVGEVADAVLPGAIFKVNFDTSTVHFLAVRLYLGSDPVSPPAKAAFASGV 527
BLAST of mRNA_Ecto-sp13_S_contig7570.18770.1 vs. uniprot
Match: A0A0G4GUV1_VITBC (Chalcone_isomerase domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GUV1_VITBC) HSP 1 Score: 147 bits (372), Expect = 6.430e-37 Identity = 86/196 (43.88%), Postives = 116/196 (59.18%), Query Frame = 1
Query: 466 PLSPDVRDPATGLVLPRTKQFASSKTGLICLGVGVRVKSVAFVTVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSIDREESVTLGWEGKDRLVVLVRDKEIGSVVDETLPASVFSLFLGSDPVSPVAKTAFAEGV 1053
P++ ++D TG+ P F + + LG G R K++ VNVY+VGLYVEPK A KAL S+ G E L D Y L G + K + L FAR+VGA KV DA +AVKGV +V+ +F SL +G+G SI + E++ +GW RL VL+R + G+VVD LP + F L+LG PVS AK AF + V
Sbjct: 4 PVAAVLKDKVTGIEFPCEATFPGTPK-MTLLGAGPRRKNLGIAKVNVYSVGLYVEPKEAAKALSSFKGESEESLMNDDRFYDTLLGK-EVPKLVLLKFARTVGAHKVADALSAVKGVEPEVVSEFCSLLEKGMGASIKKAETIAMGWTEDQRLDVLIRGQPAGTVVDAKLPKAFFELYLGKTPVSMEAKHAFVKRV 197
BLAST of mRNA_Ecto-sp13_S_contig7570.18770.1 vs. uniprot
Match: A0A0G4GWT2_9ALVE (Chalcone_isomerase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GWT2_9ALVE) HSP 1 Score: 146 bits (369), Expect = 3.000e-36 Identity = 91/201 (45.27%), Postives = 120/201 (59.70%), Query Frame = 1
Query: 454 LAKTPLSPDVRDPATGLVLPRTKQFASSKTGLICLGVGVRVKSVAF-VTVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSIDREESVTLGWEGKDRLVVLVRDKEIGSVVDETLPASVFSLFLGSDPVSPVAKTAFAEGV 1053
LA PL+ + D ATGL F SS + LG GVR K++ + VNVY+VGLYVEP AR+ L + + EL+K + Y+ L D K +HL FARSVGA K+V+A T++ GV ++ L KFS L ++ +G SI +E+VTL D L V+VR K GSV D LP + F L+LG +PVS AK AFA V
Sbjct: 27 LAGFPLAAILTDAATGLDFETDVSFPSSPK-MTLLGAGVRAKALLGPIAVNVYSVGLYVEPSKARQTLSGFKTIEEAELAKKEDFYKALMKE-DLPKAMHLKFARSVGASKIVEALTSLNGVPEESLSKFSKLLLDSIGSSIGYKETVTLSSSKPDTLDVIVRGKHAGSVRDSKLPKAFFDLYLGKNPVSSEAKKAFASRV 225
BLAST of mRNA_Ecto-sp13_S_contig7570.18770.1 vs. uniprot
Match: A0A835Z7E7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7E7_9STRA) HSP 1 Score: 145 bits (366), Expect = 2.040e-34 Identity = 87/202 (43.07%), Postives = 122/202 (60.40%), Query Frame = 1
Query: 454 LAKTPLSPDVRDPATGLVLPRTKQFASSKTGLICLGVGVRVKSVA-FVTVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSIDRE-ESVTLGWEGKDRLVVLVRDKEIGSVVDETLPASVFSLFLGSDPVSPVAKTAFAEGV 1053
+A P D+ +PATG+VL T F S L C+G+GVR V F +V+VY +GLY++ GARKALK++ E+L++ Y L G F++Y+ L F R V KV DA TAV+GV ++D + L +G+ R +++ LG+EGKDRLVV+ K G+V LPA+VF L+LG DP+ P AK A A+GV
Sbjct: 145 VATPPRKTDLVEPATGIVLWPTDSFNGSPP-LTCVGLGVRTVPVLYFSSVHVYVMGLYIDAVGARKALKAFLPLPAEDLAQKPEFYSALLKPGVFTRYIVLAFNRKVSTLKVADALTAVEGVPPPIVDAYRRLLEGALGEKGARPGDTLALGFEGKDRLVVVANGKTHGAVRSTVLPAAVFKLYLGDDPIIPAAKRAVADGV 345
BLAST of mRNA_Ecto-sp13_S_contig7570.18770.1 vs. uniprot
Match: A0A7S2UYK7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYK7_9STRA) HSP 1 Score: 136 bits (343), Expect = 4.850e-33 Identity = 77/173 (44.51%), Postives = 108/173 (62.43%), Query Frame = 1
Query: 481 VRDPATGLVLPRTKQFASSKTG--LICLGVGVRVKS-VAFVTVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSIDREESVTLGWEGKDRLVVLVRDKEIGSVVDETLPASVF 990
V +P TG+ P TK F+ + T L GVGVRVK+ V + VNVY +GLYV+P A +A Y G+D +E++KD +++L G F+K +++ +AR+VG KVVDA V + LD F L + G G +I E++TLGWEGKD+LVV VRDK +G+V L +VF
Sbjct: 31 VTEPVTGIDFPVTKSFSLNSTSPTLTLTGVGVRVKALVGPLKVNVYGMGLYVDPSRAARAFSKYKGKDAKEVAKDDDFFKILHSPG-FAKAIYIDYARAVGVDKVVDALRLVPTEDTAALDYFCDLLVIGTGSTIGNRETMTLGWEGKDKLVVQVRDKTVGTVTSAKLVEAVF 202
BLAST of mRNA_Ecto-sp13_S_contig7570.18770.1 vs. uniprot
Match: A0A7S1JL13_9ALVE (Hypothetical protein n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1JL13_9ALVE) HSP 1 Score: 119 bits (298), Expect = 1.290e-27 Identity = 67/143 (46.85%), Postives = 87/143 (60.84%), Query Frame = 1
Query: 625 VEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSIDREESVTLGWEGKDRLVVLVRDKEIGSVVDETLPASVFSLFLGSDPVSPVAKTAFAEGV 1053
VEPK A KAL S+ G E L D Y L G + K + L FAR+VGA KV DA +AVKGV +V+ +F SL +G+G SI + E++ +GW RL VL+R + G+VVD LP + F L+LG PVS AK AF + V
Sbjct: 1 VEPKEASKALSSFKGESEESLMNDDRFYDTLLGK-EVPKLVLLKFARTVGAHKVADALSAVKGVEPEVVSEFCSLLEKGMGASIKKAETIAMGWTEDQRLDVLIRGQPAGTVVDAKLPKAFFELYLGKTPVSMEAKHAFVKRV 142
BLAST of mRNA_Ecto-sp13_S_contig7570.18770.1 vs. uniprot
Match: A0A835ZLC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLC9_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.180e-26 Identity = 100/312 (32.05%), Postives = 123/312 (39.42%), Query Frame = 1
Query: 481 VRDPATGLVLPRTKQFASSKTGLICLGVGVRVKSVAFVTVNVYTVGL----YVEPKGARKALKSYAGRDPEELSKDKSVYRVL---------------------------------------------------------------------------------------------GGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSIDREESVTLGWEGKDRLVVLVRDKEIGSVVDETLPASVFS------------------------LFLGSDPVSPVAKTAFAEGV 1053
V +PATG+ L T F S L C+G GVR KS+A V+VNVY +GL YVE + A KAL YAG P E +KD Y L + +YL L FAR V A KV DA TAV+GV DVL F+ L +G ++ +++ LGWEGKDRLVV+VR K+ G V D LP ++F L+LGSDPVSP AK AFA GV
Sbjct: 116 VVEPATGISLRATDTFGGSAP-LRCVGAGVRAKSLAVVSVNVYALGLCVALYVETRAAAKALAKYAGVAPAERAKDAGFYEELMKPHPYLMPNPNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKRAXXXXXXXXXTKVSVLVSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTAAYPRYLLLSFARDVSAAKVTDALTAVQGVAPDVLKAFAHLLGSAIGGAVHAGDTIALGWEGKDRLVVVVRGKKAGEVKDAALPGAIFKRSVMPISDARPFCRCALLPPLRAQLYLGSDPVSPPAKAAFASGV 426
BLAST of mRNA_Ecto-sp13_S_contig7570.18770.1 vs. uniprot
Match: A0A7S2S0W0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S0W0_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 7.530e-17 Identity = 69/203 (33.99%), Postives = 101/203 (49.75%), Query Frame = 1
Query: 475 PDVRDPATGLVLPRTKQF--ASSKTGLIC-LGVGVRVKSVAFVTVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKY----LHLVFARSVGAQKVVDAFTAVKGVNQD--VLDKFSSLTMEGVGKSIDREESVTLGWEGKDRLVVLVRDKEIGSVVDETLPASVFSLFLGSDPVSPVAKTAFAEGVP 1056
P + + TG+ LP F A K L+C LG G R+K + + V VY +GLYVE GA KAL E D S + D K+ + L FAR V +++V DA + D +L+KF + G+GKS+D+ ES+ W + LV+ VR K G + LP +F FLG + P +++ A+G+P
Sbjct: 78 PPLEEATTGITLPGQLDFPGADGKPLLMCGLGCGPRLKKIGPLNVKVYAIGLYVEA-GAAKAL--------EPFKSDSSSPALFEALFDQEKFFVRKVLLTFARGVSSKQVTDAIAENLKAHLDEKILEKFGTTLASGIGKSLDKGESIFFAWTAPESLVIGVRGKATGELSHPKLPYILFRGFLGPNTPIPPLRSSTAQGLP 271 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7570.18770.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7570.18770.1 >prot_Ecto-sp13_S_contig7570.18770.1 ID=prot_Ecto-sp13_S_contig7570.18770.1|Name=mRNA_Ecto-sp13_S_contig7570.18770.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=358bp MPSREVGNLAVAAAFALFSAFLFFGRDEAGAWRENFLYLPIGGSTAPIASback to top mRNA from alignment at Ecto-sp13_S_contig7570:1751..5269+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7570.18770.1 ID=mRNA_Ecto-sp13_S_contig7570.18770.1|Name=mRNA_Ecto-sp13_S_contig7570.18770.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3519bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7570:1751..5269+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7570:1751..5269+ >mRNA_Ecto-sp13_S_contig7570.18770.1 ID=mRNA_Ecto-sp13_S_contig7570.18770.1|Name=mRNA_Ecto-sp13_S_contig7570.18770.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1074bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7570:1751..5269+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |