mRNA_Ecto-sp13_S_contig7566.18766.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7566.18766.1 vs. uniprot
Match: D7G6H5_ECTSI (Cyclic nucleotide-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6H5_ECTSI) HSP 1 Score: 369 bits (948), Expect = 1.030e-118 Identity = 174/183 (95.08%), Postives = 177/183 (96.72%), Query Frame = 1
Query: 280 MQKQELLLKEDPFLCDANWNLVWRYLPLFTAESYFTRLSKGHITLSADELEDIRDANDRARKLGDHHRSFFEVLKAWFRESKGGFSYSGIPHRLRSPWYTYHTKFLFADAGGEAVWGDLESFLANHTAAGDDSVESWTGHLKHSRFDGGITGTIDKFSRTHDHAREKTHRPAGGRGEEKHEGE 828
MQKQE LLKEDPFLCDANWNLVWRYLPLFTAES+FTRLSKGHITLSADELEDIRD NDRARKLGDHHRSFFEVLKAWFRE KGGFSYSGIPHRLRSPWY YHTKFLFADAGGEAVWG+LESFLANHTAAGDDSVESWTGHLKHSRFDGGITGTIDKFSRTHDHAREKTH+PAG RGEEKHE E
Sbjct: 1 MQKQEQLLKEDPFLCDANWNLVWRYLPLFTAESFFTRLSKGHITLSADELEDIRDTNDRARKLGDHHRSFFEVLKAWFRERKGGFSYSGIPHRLRSPWYEYHTKFLFADAGGEAVWGNLESFLANHTAAGDDSVESWTGHLKHSRFDGGITGTIDKFSRTHDHAREKTHKPAGARGEEKHEAE 183
BLAST of mRNA_Ecto-sp13_S_contig7566.18766.1 vs. uniprot
Match: A0A6H5LPB6_9PHAE (Na_H_Exchanger domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LPB6_9PHAE) HSP 1 Score: 356 bits (913), Expect = 5.230e-117 Identity = 178/186 (95.70%), Postives = 181/186 (97.31%), Query Frame = 1
Query: 1 GEYKISVPQMIVLTHSGLRGAVALILALVVDGVHEIDQEDRDKIVFLTAGIAVLSLLVNGTTTGPLVRFLKLDRASEASQGVFGQACFALELSMQKQELLLKEDPFLCDANWNLVWRYLPLFTAESYFTRLSKGHITLSADELEDIRDANDRARKLGDHHRSFFEVLKAWFRESKGGFSYSGIPHR 558
GEYKISVPQMIVLTHSGLRGAVALILALVVDGVHEIDQEDRDKIVFLTAGIAVLSLLVNGTTTGPLVRFLKLDRASEASQGVFGQACFALELSMQKQE LLKEDPFLCDA+WNLVWRYLPLFTAESYFTRLS GHITLSADELEDI+D NDRARKLGDHHRSF EVLKAW+RE KGGFSYSGIPHR
Sbjct: 379 GEYKISVPQMIVLTHSGLRGAVALILALVVDGVHEIDQEDRDKIVFLTAGIAVLSLLVNGTTTGPLVRFLKLDRASEASQGVFGQACFALELSMQKQEQLLKEDPFLCDADWNLVWRYLPLFTAESYFTRLSMGHITLSADELEDIQDTNDRARKLGDHHRSFSEVLKAWYRERKGGFSYSGIPHR 564
BLAST of mRNA_Ecto-sp13_S_contig7566.18766.1 vs. uniprot
Match: D8LKR2_ECTSI (Sodium/hydrogen exchanger family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKR2_ECTSI) HSP 1 Score: 153 bits (387), Expect = 9.610e-39 Identity = 89/211 (42.18%), Postives = 124/211 (58.77%), Query Frame = 1
Query: 7 YKISVPQMIVLTHSGLRGAVALILALVVDGVHEIDQEDRDKIVFLTAGIAVLSLLVNGTTTGPLVRFLKLDRASEASQGVFGQACFALELSMQKQELLLKEDPFLCDANWNLVWRYLPLFTAESYFTRLSKGHITLSADELEDIRDANDR-ARKLGDHHRSFFEV--LKAWFRES----KGGFSYSGIPHRLRSPWYTYHTKFLFADAGGE 618
Y ++ Q+IVL +GLRGAV L LAL+V ++ RD ++F AGIA L+L++NG+ G LV L LDR++ A VF +AC A+E ++ + LLK D FL DA+W +VWRYLP+ T+++Y+ R+ G+I LS +E EDI D + G H F + WF GG Y +P RLR WYTYH KF + A G+
Sbjct: 293 YGMTHRQLIVLAFAGLRGAVGLTLALIVVEDDRFSEDVRDLVLFYVAGIAALTLIINGSLCGYLVSALGLDRSTTAETEVFTKACSAIEARLEHKLDLLKGDRFLGDADWEMVWRYLPVSTSKTYWHRIRHGNINLSVEEEEDIHMIRDGIVNEAGLHGDVAFRAHQVHKWFTRRILRLPGGVGYCELPSRLRVTWYTYHKKFHHSSATGD 503
BLAST of mRNA_Ecto-sp13_S_contig7566.18766.1 vs. uniprot
Match: A0A6H5L0H9_9PHAE (Na_H_Exchanger domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H9_9PHAE) HSP 1 Score: 142 bits (357), Expect = 1.760e-34 Identity = 75/194 (38.66%), Postives = 118/194 (60.82%), Query Frame = 1
Query: 25 QMIVLTHSGLRGAVALILALVVDGVHEIDQEDRDKIVFLTAGIAVLSLLVNGTTTGPLVRFLKLDRASEASQGVFGQACFALELSMQKQELLLKEDPFLCDANWNLVWRYLPLFTAESYFTRLSKGHITLSADELEDIRDANDRARKLGDHHRSFFEVLKAWFRESKGGFSYSGIPHRLRSPWYTYHTKFLFAD 606
QM+VLT++GLRGAV L LALVV ID + D ++F+ AG+A+++LL+NGTT G L+ + ++DRA++A +F +AC A+E ++ LK+D FL DA W +VWRY+P+ T+ Y+ R+ G + L+ E E+I +++ G + +L G ++ +P RLR+ W +YH KF D
Sbjct: 403 QMLVLTYAGLRGAVGLTLALVVQENEAIDDDVGDMVMFMMAGLAIMTLLINGTTCGKLLSYFRMDRATKAQTEIFIRACSAVESKLEHVVEELKKDRFLGDAEWPIVWRYVPIMTSRVYWHRIRYGSVVLANGEDEEI----SQSKPSGLSSATASAILSLPGNGGGGAGRFAHLPPRLRATWQSYHRKFHVTD 592
BLAST of mRNA_Ecto-sp13_S_contig7566.18766.1 vs. uniprot
Match: A0A6H5L6F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6F4_9PHAE) HSP 1 Score: 132 bits (333), Expect = 2.860e-31 Identity = 82/202 (40.59%), Postives = 113/202 (55.94%), Query Frame = 1
Query: 52 LRGAVALILALVVDGVHEIDQEDRDKIVFLTAGIAVLSLLVNGTTTGPLVRFLKLDR---ASEASQGVFGQACFALELSMQKQELLLKEDPFLCDANWNLVWRYLPLFTAESYFTRLSKGHITLSADELEDIRDANDR-ARKLGDHHRSFFEV--LKAWFRES----KGGFSYSGIPHRLRSPWYTYH---TKFLFADAGGE 618
+RGAV L LAL+V + RD ++F AGIA L+L++NG+ G LV L LDR ++ A VF +AC A+E ++ + LLK D FL DA+W +VWRYLP+ T++ Y+ R+ G+I LS +E EDI D + G H F + WF +GG Y +P RLR WYTYH KF + A G+
Sbjct: 1 MRGAVGLTLALIVVEDDRFSEHVRDLVLFYVAGIAALTLIINGSLCGYLVSALGLDRHVLSTTAETEVFTKACSAIEARLEHKLDLLKGDRFLGDADWEMVWRYLPVSTSKMYWHRIRHGNINLSVEEEEDIHMIRDGIVNEAGLHGVLAFRAHQVHKWFTRRILRLRGGVGYCDLPSRLRVTWYTYHKASVKFHHSSATGD 202
BLAST of mRNA_Ecto-sp13_S_contig7566.18766.1 vs. uniprot
Match: A0A4D9CXX3_9STRA (Na_H_Exchanger domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXX3_9STRA) HSP 1 Score: 130 bits (327), Expect = 2.100e-30 Identity = 91/264 (34.47%), Postives = 131/264 (49.62%), Query Frame = 1
Query: 1 GEYKISVPQMIVLTHSGLRGAVALILALVVDGVHEIDQEDRDKIVFLTAGIAVLSLLVNGTTTGPLVRFLKLDRASEASQGVFGQACFALELSMQKQELLLKEDPFLCDANWNLVWRYLPLFTAESYFTRLSKGHITLS--------------ADELEDIRDANDRARKLGDHHRSFFEVLKAWFRESKGGFS--------YSGIPHRLRSPWYTYHTKFLFADAGGEAVWGDLESFLA----NHTAAGDDSVESWTGHLKHSR 714
G Y I Q +VL +SGLRGAV L LA+ + +I RD+I+F AG ++LSLLVNGTT PL+ L LDR S A V+ + ALE ++ + +LLK +PFL DA+W +VWRYLP+ T + Y+ R +GH L+ +ELE+ +AR+ R ++ A ++ S G+P+RLR W Y + D + L + L NH +VE GH+KH +
Sbjct: 358 GSYGIDTRQGVVLAYSGLRGAVGLTLAIAIHQDSQIPIATRDRILFHVAGASLLSLLVNGTTLKPLITVLGLDRESPAEVEVYQRTSIALEQRIEDRVMLLKREPFLGDADWGVVWRYLPVLTKDVYWHRFRQGHTLLTDWEAEYMSLRSRGDEEELEETVLKGQQARRQPLRRRRKAQLKAASVAAAQASASNPLSAPSKLKGVPNRLRRTWRYYAQLYNDLDGPEREGFRQLRAGLLDAWRNHL-----TVE---GHMKHEQ 613
BLAST of mRNA_Ecto-sp13_S_contig7566.18766.1 vs. uniprot
Match: D7G372_ECTSI (Sodium/hydrogen exchanger family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G372_ECTSI) HSP 1 Score: 130 bits (326), Expect = 2.860e-30 Identity = 70/195 (35.90%), Postives = 115/195 (58.97%), Query Frame = 1
Query: 25 QMIVLTHSGLRGAVALILALVVDGVHEIDQEDRDKIVFLTAGIAVLSLLVNGTTTGPLVRFLKLDRASEASQGVFGQACFALELSMQKQELLLKEDPFLCDANWNLVWRYLPLFTAESYFTRLSKGHITLSADELEDIRDANDRARKLGDHHRSFFEVLKAWFRESKGGFS-YSGIPHRLRSPWYTYHTKFLFAD 606
Q +VLT++G+RG L L L+V ID + D ++F+ AG+A+++LL+NGTT G L+ + ++DRA++A +F +AC A+E ++ LK+D FL DA W +VWRY+P+ T+ Y+ R+ G + L+ E E+I +++ G + +L GG ++ +P RLR+ W +YH KF D
Sbjct: 309 QKLVLTYAGVRGGGGLTLGLIVQENEAIDDDVGDMVMFMIAGLAIMTLLINGTTCGKLLSYFRMDRATKAQTEIFIRACSAVESKLEHVVEELKKDRFLGDAEWPVVWRYVPIMTSRVYWHRIRYGSVVLAKGEDEEI----SQSQPSGLSSATASAMLSLLPGNGGGGAGRFTHLPPRLRATWQSYHRKFHVTD 499
BLAST of mRNA_Ecto-sp13_S_contig7566.18766.1 vs. uniprot
Match: A0A835YJP6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJP6_9STRA) HSP 1 Score: 114 bits (285), Expect = 2.560e-27 Identity = 62/154 (40.26%), Postives = 93/154 (60.39%), Query Frame = 1
Query: 1 GEYKISVPQMIVLTHSGLRGAVALILALVVDGVHE----IDQEDRDKIVFLTAGIAVLSLLVNGTTTGPLVRFLKLDRASEASQGVFGQACFALELSMQKQELLLKE-DPFLCDANWNLVWRYLPLFTAESYFTRLSKGHITLSADELEDIRDA 447
GEY ++ Q +VL HSGLRGA++LILAL+VD I RD IV AG +VL+L+V G + PL+ L++DR + + F C LE + L+E +PFL +A+W+LVWR++P A +Y+ R+ G +TL+ E++D+ A
Sbjct: 31 GEYGLTPKQGVVLVHSGLRGALSLILALIVDSTESVRITIPAHHRDIIVLFVAGTSVLTLVVQGCSARPLIALLRMDRVTATQERAFAATCNVLETRAESAARHLRESEPFLKNADWSLVWRFVPAPNAYAYWGRVMSGRVTLAPCEVKDLEGA 184
BLAST of mRNA_Ecto-sp13_S_contig7566.18766.1 vs. uniprot
Match: A0A836CH43_9STRA (Sodium/hydrogen exchanger family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH43_9STRA) HSP 1 Score: 118 bits (296), Expect = 2.700e-26 Identity = 62/147 (42.18%), Postives = 92/147 (62.59%), Query Frame = 1
Query: 13 ISVPQMIVLTHSGLRGAVALILALVVDGVHEIDQEDRDKIVFLTAGIAVLSLLVNGTTTGPLVRFLKLDRASEASQGVFGQACFALELSMQKQELLLKEDPFLCDANWNLVWRYLPLFTAESYFTRLSKGHITLSADELEDIRDAND 453
+ + Q VL GLRGA+ L LAL++ +DQ+ RD F T G+ L+L+++G PL+ L LDR+ + VF +AC+A+E +Q L+K D FL DA+W LVWRYLP+ TA++Y+ R+ +G+I LS E +D+R D
Sbjct: 324 VDLRQAAVLAFGGLRGAIGLTLALILYRQQSLDQDTRDLAFFFTWGVTALTLIIDGALAKPLLSRLGLDRSVGSETEVFTRACWAMEARLQHAVDLIKGDRFLGDAHWELVWRYLPVLTAKTYWHRIRQGNIVLSDVEEQDLRRMAD 470
BLAST of mRNA_Ecto-sp13_S_contig7566.18766.1 vs. uniprot
Match: A0A7S3JZM7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZM7_9STRA) HSP 1 Score: 117 bits (293), Expect = 6.620e-26 Identity = 58/147 (39.46%), Postives = 92/147 (62.59%), Query Frame = 1
Query: 7 YKISVPQMIVLTHSGLRGAVALILALVVDGVHEIDQEDRDKIVFLTAGIAVLSLLVNGTTTGPLVRFLKLDRASEASQGVFGQACFALELSMQKQ-ELLLKEDPFLCDANWNLVWRYLPLFTAESYFTRLSKGHITLSADELEDIRD 444
Y S+ Q +++ + GLRGA+AL LAL +DG I + +++F +GI L+L +NGTTT L+R LKL+ ASEA +F EL + ++ LK + F D++W++VWRY+P +A++Y+ R+ + LSA E +D+RD
Sbjct: 390 YGFSIKQALIVLYGGLRGAIALALALGIDGTDHIPDRLKQRLLFQVSGIVFLTLAINGTTTSYLLRLLKLNTASEAESTIFAHVTVDAELKLNQEINSNLKREQFFGDSDWSMVWRYVPCLSADAYWHRIRDHRLELSAAEFDDLRD 536 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7566.18766.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7566.18766.1 >prot_Ecto-sp13_S_contig7566.18766.1 ID=prot_Ecto-sp13_S_contig7566.18766.1|Name=mRNA_Ecto-sp13_S_contig7566.18766.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=269bp MIVLTHSGLRGAVALILALVVDGVHEIDQEDRDKIVFLTAGIAVLSLLVNback to top mRNA from alignment at Ecto-sp13_S_contig7566:1440..6857- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7566.18766.1 ID=mRNA_Ecto-sp13_S_contig7566.18766.1|Name=mRNA_Ecto-sp13_S_contig7566.18766.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5418bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7566:1440..6857- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7566:1440..6857- >mRNA_Ecto-sp13_S_contig7566.18766.1 ID=mRNA_Ecto-sp13_S_contig7566.18766.1|Name=mRNA_Ecto-sp13_S_contig7566.18766.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=807bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7566:1440..6857- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |