mRNA_Ecto-sp13_S_contig75507.18742.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig75507.18742.1 vs. uniprot
Match: A0A6H5LKM9_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LKM9_9PHAE) HSP 1 Score: 100 bits (249), Expect = 2.250e-23 Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 1
Query: 1 VAVAALYGNRAASYVMILGYEQAILDCDRAVELNPKFANAIFRKAMALKKLVR 159
VAVAALYGNRAASYVMILGYEQAILDCDRAVELNPKFANAIFRKAMALKKL R
Sbjct: 87 VAVAALYGNRAASYVMILGYEQAILDCDRAVELNPKFANAIFRKAMALKKLGR 139
BLAST of mRNA_Ecto-sp13_S_contig75507.18742.1 vs. uniprot
Match: A0A7I4YJY4_HAECO (RPAP3_C domain-containing protein n=1 Tax=Haemonchus contortus TaxID=6289 RepID=A0A7I4YJY4_HAECO) HSP 1 Score: 58.2 bits (139), Expect = 1.740e-8 Identity = 25/48 (52.08%), Postives = 40/48 (83.33%), Query Frame = 1
Query: 10 AALYGNRAASYVMILGYEQAILDCDRAVELNPKFANAIFRKAMALKKL 153
AA++GNRA SY+ + + +A++DC+RA+EL+PKFA A++R+A AL K+
Sbjct: 38 AAVFGNRAQSYLNLERWPEALMDCNRALELDPKFAKALYRRACALDKM 85
BLAST of mRNA_Ecto-sp13_S_contig75507.18742.1 vs. uniprot
Match: A0A3P7WU08_HELPZ (TPR_REGION domain-containing protein n=1 Tax=Heligmosomoides polygyrus TaxID=6339 RepID=A0A3P7WU08_HELPZ) HSP 1 Score: 56.2 bits (134), Expect = 7.060e-8 Identity = 24/49 (48.98%), Postives = 39/49 (79.59%), Query Frame = 1
Query: 7 VAALYGNRAASYVMILGYEQAILDCDRAVELNPKFANAIFRKAMALKKL 153
+AA+ GNRA Y+ + + +AI+DC++A+EL+PKF A++R+A ALKK+
Sbjct: 37 LAAVLGNRAQCYLNLERWSEAIMDCNKALELDPKFGKALYRRAQALKKI 85
BLAST of mRNA_Ecto-sp13_S_contig75507.18742.1 vs. uniprot
Match: A0A2G9U078_TELCI (Tetratricopeptide repeat protein n=1 Tax=Teladorsagia circumcincta TaxID=45464 RepID=A0A2G9U078_TELCI) HSP 1 Score: 51.2 bits (121), Expect = 4.900e-7 Identity = 21/40 (52.50%), Postives = 34/40 (85.00%), Query Frame = 1
Query: 10 AALYGNRAASYVMILGYEQAILDCDRAVELNPKFANAIFR 129
A ++GNRA SYV + +++A++DC+RA+EL+PKFA A++R
Sbjct: 38 APVFGNRAQSYVNLERWQEALMDCNRALELDPKFAKALYR 77
BLAST of mRNA_Ecto-sp13_S_contig75507.18742.1 vs. uniprot
Match: F1QQI6_DANRE (Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) n=282 Tax=Teleostei TaxID=32443 RepID=F1QQI6_DANRE) HSP 1 Score: 53.9 bits (128), Expect = 6.290e-7 Identity = 24/52 (46.15%), Postives = 35/52 (67.31%), Query Frame = 1
Query: 19 YGNRAASYVMILGYEQAILDCDRAVELNPKFANAIFRKAMALKKLVRMHACI 174
Y NRAA+Y + + + I DC +AVELNP++ A+FR+A AL+KL C+
Sbjct: 127 YQNRAAAYEQQMKWTEVIQDCSQAVELNPRYVKALFRRAKALEKLDNKKECL 178
BLAST of mRNA_Ecto-sp13_S_contig75507.18742.1 vs. uniprot
Match: A0A674MT34_TAKRU (Uncharacterized protein n=5 Tax=Euteleosteomorpha TaxID=1489388 RepID=A0A674MT34_TAKRU) HSP 1 Score: 53.5 bits (127), Expect = 8.610e-7 Identity = 24/52 (46.15%), Postives = 34/52 (65.38%), Query Frame = 1
Query: 19 YGNRAASYVMILGYEQAILDCDRAVELNPKFANAIFRKAMALKKLVRMHACI 174
Y NRAA+Y L + + + DC AVELNP++ A+FR+A AL+KL C+
Sbjct: 135 YQNRAAAYEQQLQWTEVVQDCSNAVELNPRYIKALFRRAKALEKLDNKKECL 186
BLAST of mRNA_Ecto-sp13_S_contig75507.18742.1 vs. uniprot
Match: UPI000854D295 (LOW QUALITY PROTEIN: mitochondrial import receptor subunit TOM70 n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI000854D295) HSP 1 Score: 53.5 bits (127), Expect = 8.610e-7 Identity = 23/52 (44.23%), Postives = 35/52 (67.31%), Query Frame = 1
Query: 19 YGNRAASYVMILGYEQAILDCDRAVELNPKFANAIFRKAMALKKLVRMHACI 174
Y NRAA+Y + +++ + DC +AVELNPK+ A+FR+A A +KL C+
Sbjct: 126 YQNRAAAYEQLQTWKEVVQDCTKAVELNPKYVKALFRRAKAQEKLDNKKECL 177
BLAST of mRNA_Ecto-sp13_S_contig75507.18742.1 vs. uniprot
Match: H2TWD4_TAKRU (Uncharacterized protein n=9 Tax=Percomorphaceae TaxID=1489872 RepID=H2TWD4_TAKRU) HSP 1 Score: 53.5 bits (127), Expect = 8.620e-7 Identity = 24/52 (46.15%), Postives = 34/52 (65.38%), Query Frame = 1
Query: 19 YGNRAASYVMILGYEQAILDCDRAVELNPKFANAIFRKAMALKKLVRMHACI 174
Y NRAA+Y L + + + DC AVELNP++ A+FR+A AL+KL C+
Sbjct: 160 YQNRAAAYEQQLQWTEVVQDCSNAVELNPRYIKALFRRAKALEKLDNKKECL 211
BLAST of mRNA_Ecto-sp13_S_contig75507.18742.1 vs. uniprot
Match: UPI0012EED92F (mitochondrial import receptor subunit TOM70-like n=1 Tax=Anarrhichthys ocellatus TaxID=433405 RepID=UPI0012EED92F) HSP 1 Score: 53.1 bits (126), Expect = 9.010e-7 Identity = 23/52 (44.23%), Postives = 35/52 (67.31%), Query Frame = 1
Query: 19 YGNRAASYVMILGYEQAILDCDRAVELNPKFANAIFRKAMALKKLVRMHACI 174
Y NRAA+Y + + + + DC RAVE+NP++ A+FR+A AL+KL C+
Sbjct: 125 YQNRAAAYEQQMKWTEVVQDCCRAVEMNPRYVKALFRRAKALEKLDNKKECL 176
BLAST of mRNA_Ecto-sp13_S_contig75507.18742.1 vs. uniprot
Match: UPI0003AF88E7 (mitochondrial import receptor subunit TOM70 n=1 Tax=Pundamilia nyererei TaxID=303518 RepID=UPI0003AF88E7) HSP 1 Score: 53.1 bits (126), Expect = 1.160e-6 Identity = 22/52 (42.31%), Postives = 35/52 (67.31%), Query Frame = 1
Query: 19 YGNRAASYVMILGYEQAILDCDRAVELNPKFANAIFRKAMALKKLVRMHACI 174
Y NRAA+Y + + + + DC +AVELNP++ A+FR+A AL++L C+
Sbjct: 126 YQNRAAAYEQQMKWTEVVQDCSKAVELNPRYVKALFRRAKALERLENRKECL 177 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig75507.18742.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig75507.18742.1 >prot_Ecto-sp13_S_contig75507.18742.1 ID=prot_Ecto-sp13_S_contig75507.18742.1|Name=mRNA_Ecto-sp13_S_contig75507.18742.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=58bp VAVAALYGNRAASYVMILGYEQAILDCDRAVELNPKFANAIFRKAMALKKback to top mRNA from alignment at Ecto-sp13_S_contig75507:59..232- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig75507.18742.1 ID=mRNA_Ecto-sp13_S_contig75507.18742.1|Name=mRNA_Ecto-sp13_S_contig75507.18742.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=174bp|location=Sequence derived from alignment at Ecto-sp13_S_contig75507:59..232- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig75507:59..232- >mRNA_Ecto-sp13_S_contig75507.18742.1 ID=mRNA_Ecto-sp13_S_contig75507.18742.1|Name=mRNA_Ecto-sp13_S_contig75507.18742.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=174bp|location=Sequence derived from alignment at Ecto-sp13_S_contig75507:59..232- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |