mRNA_Ecto-sp13_S_contig7478.18666.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7478.18666.1 vs. uniprot
Match: A0A6H5LAP0_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAP0_9PHAE) HSP 1 Score: 432 bits (1111), Expect = 2.620e-146 Identity = 226/301 (75.08%), Postives = 253/301 (84.05%), Query Frame = 1
Query: 1 MLKEEGKGRGTSSFQPMKWGIKDGQSGSAVYRRHEHGPTFGAGHDLHLCWNGAASTVKTNNSTYDVPAGSLFLQLNRRSLVDVETFRVCPTPTCTLPLAKQEHHAGESISAPTAPVRTSDDVPTFGHLIAGSLMEAEMTLQDAGIELSLANARTTACATALAAVYGPDVANGEEEDVVELSVRGTEMTTLRSTLRICLNSALAARFDEDKWPAGKKDIDSNGRRVIDCKPSVFSKVLDVLRMAKRARWAGGEDLQGMNETPRVTIKAGDRLAFEEFVDMYFEGCESFIMEHVSLLGDEAAT 903
+LK+EGKG +S+F PMKWG+K+G + AV GP FG DL + WNG STV T+NSTYDVPAGS FLQLN R L+D+E FRVC PT TLPLAKQEH AGE + PTAPVRTSDDVPTFG LIA SLMEAEM LQDAGIEL+LA ARTTACATALAAVYGPDVA+G++EDVVELSVRGT MTTLRSTLR+C +SALAARFDE KWPA KKD+DS+GRR+IDC+P+VFSKVLDVLR+AKRA WAGGE+LQGM ET RVTIK GDR+AFEEFVDMYF+GCESFIM HV L GDEA T
Sbjct: 285 ILKDEGKG--SSTFPPMKWGVKNGLAAKAV--NQGCGPCFGEC-DLKVNWNGNMSTVGTDNSTYDVPAGSHFLQLNGRHLLDIEAFRVCSKPTHTLPLAKQEHRAGEGTNTPTAPVRTSDDVPTFGQLIADSLMEAEMVLQDAGIELALAKARTTACATALAAVYGPDVASGQQEDVVELSVRGTAMTTLRSTLRVCPDSALAARFDEGKWPAAKKDLDSDGRRMIDCRPAVFSKVLDVLRIAKRAAWAGGENLQGMKET-RVTIKPGDRVAFEEFVDMYFKGCESFIMAHVCLPGDEADT 579
BLAST of mRNA_Ecto-sp13_S_contig7478.18666.1 vs. uniprot
Match: D7FIX7_ECTSI (BTB_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX7_ECTSI) HSP 1 Score: 365 bits (936), Expect = 1.280e-120 Identity = 192/301 (63.79%), Postives = 223/301 (74.09%), Query Frame = 1
Query: 1 MLKEEGKGRGTSSFQPMKWGIKDGQSGSAVYRRHEHGPTFGAGHDLHLCWNGAASTVKTNNSTYDVPAGSLFLQLNRRSLVDVETFRVCPTPTCTLPLAKQEHHAGESISAPTAPVRTSDDVPTFGHLIAGSLMEAEMTLQDAGIELSLANARTTACATALAAVYGPDVANGEEEDVVELSVRGTEMTTLRSTLRICLNSALAARFDEDKWPAGKKDIDSNGRRVIDCKPSVFSKVLDVLRMAKRARWAGGEDLQGMNET----PRVTIKAGDRLAFEEFVDMYFEGCESFIMEHVSLLGD 891
MLK+ G+GR + +Q KWG+KDG+S AVYR +GP FG G DLH+ WNG S V+T N TY P GS F +LN LVDVETFRV P P KQE HA E + P APV+T+DDV +FG L+A SLME E LQ+A ELSLA ART ACATA+AAVYGP+VA G E+DVVEL+VRGT MTTLRSTLRIC +SALAA F+E++WP +KD+DSNGRR+IDCKPSVFSKVLDVLR+AKRA WA E+ NE PRVTIKAGD AFEEFVDMYF CE+F+MEHV LL D
Sbjct: 224 MLKD-GEGRHSGVYQSTKWGVKDGRSAYAVYRGQGYGPCFGEGRDLHVVWNGTESAVRTGNQTYHAPTGSPFPELNGCRLVDVETFRVGPKPNTPTSSTKQEDHAVEDKTGPGAPVKTADDVRSFGDLVADSLMEEEKLLQEAANELSLAKARTMACATAVAAVYGPEVATGTEDDVVELNVRGTRMTTLRSTLRICPDSALAAWFNEEQWPVAEKDLDSNGRRIIDCKPSVFSKVLDVLRIAKRAAWARSEEGPVRNEKRRVKPRVTIKAGDCAAFEEFVDMYFPCCETFMMEHVDLLDD 523
BLAST of mRNA_Ecto-sp13_S_contig7478.18666.1 vs. uniprot
Match: D7FIX8_ECTSI (BTB_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX8_ECTSI) HSP 1 Score: 298 bits (764), Expect = 1.240e-99 Identity = 150/168 (89.29%), Postives = 156/168 (92.86%), Query Frame = 1
Query: 400 MEAEMTLQDAGIELSLANARTTACATALAAVYGPDVANGEEEDVVELSVRGTEMTTLRSTLRICLNSALAARFDEDKWPAGKKDIDSNGRRVIDCKPSVFSKVLDVLRMAKRARWAGGEDLQGMNETPRVTIKAGDRLAFEEFVDMYFEGCESFIMEHVSLLGDEAAT 903
MEAEM LQ+AGIELS A ARTTACATALAAVYGPDVANG+EEDVVELSVRGTEM TLRSTLRIC +SALAARFDEDKWPA KKD+DSNGRRVIDCKPSVFSKVLDVLRMAKR RWA E L+GMNETPRVTIKAGDR AFEEFVDMYF+GCESFIMEHVSLLGDE AT
Sbjct: 1 MEAEMVLQEAGIELSPAKARTTACATALAAVYGPDVANGQEEDVVELSVRGTEMMTLRSTLRICPSSALAARFDEDKWPAAKKDVDSNGRRVIDCKPSVFSKVLDVLRMAKRVRWADDEKLEGMNETPRVTIKAGDRFAFEEFVDMYFKGCESFIMEHVSLLGDETAT 168
BLAST of mRNA_Ecto-sp13_S_contig7478.18666.1 vs. uniprot
Match: A0A6H5JD55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD55_9PHAE) HSP 1 Score: 278 bits (711), Expect = 1.780e-87 Identity = 160/262 (61.07%), Postives = 187/262 (71.37%), Query Frame = 1
Query: 133 DLHLCWN-GAASTVKTNNSTYDVPAGSLFLQLNRRSLVDVETFRVCPT-PTCTLPLAKQEHHAGESISAPTAPVRTS---DDVPTFGHLIAGSLMEAEMTLQDAGIELSLANARTTACATALAAVYGPDVANG-EEEDVVELSVRGTEMTTLRSTLRICLNSALAARFDEDKWPAGKKDIDSNGRRVIDCKPSVFSKVLDVLRMAKRARWAGGEDLQGMNETPRVTIKAGDRLAFEEFVDMYFEGCESFIMEHVSLLGDEAA 900
DL + W GAASTV+T N T DV A S L LN R +VD+ETFR+C PT L AK +HH I+ PTAPVR+ P FG LIA +LME E+ LQ+A EL++A ARTTACATAL VYGPDVA G EEEDVVELSV GT +T + STLR+C S A +F ED+WPA KKD+D NGRRVIDC+PSVFSKV+D+LR A WA G+D Q N+TPRVTIK DR FEEFVD+YF+GCES IME+V LGDE A
Sbjct: 209 DLRVVWKVGAASTVQTKNLTQDVQAESRLLALNGRGVVDIETFRLCYCRPTDALSSAKPKHHFIGDIAVPTAPVRSRLLRMSFP-FGRLIADALME-EIVLQEANNELAVAEARTTACATALVVVYGPDVAKGREEEDVVELSVCGTRVTRMCSTLRVCPGSTFATQFLEDRWPATKKDLDDNGRRVIDCEPSVFSKVMDILR----ASWARGDDDQEANKTPRVTIKPCDRAEFEEFVDIYFKGCESLIMEYVESLGDEEA 464
BLAST of mRNA_Ecto-sp13_S_contig7478.18666.1 vs. uniprot
Match: A0A6H5JQU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQU4_9PHAE) HSP 1 Score: 269 bits (688), Expect = 2.680e-80 Identity = 154/271 (56.83%), Postives = 169/271 (62.36%), Query Frame = 1
Query: 88 VYRRHEHGPTFGAGHDLHLCWNGAASTVKTNNSTYDVPAGSLFLQLNRRSLVDVETFRVCPTPTCTLPLAKQEHHAGESISAPTAPVRTSDDVPTFGHLIAGSLMEAEMTLQDAGIELSLANARTTACATALAAVYGPDVANGEEEDVVELSVRGTEMTTLRSTLRICLNSALAARFDEDKWPAGKKDIDSNGRRVIDCKPSVFSKVLDVLRMAKRARWAGGEDLQGMNETPRVTIKAGDRLAFEEFVDMYFEGCESFIMEHVSLLGDEAA 900
V R GPTFG GHDL WN +T KT N TYDVP GS FLQLN +VD+ETFRVCP PT T AK G+L L TT ATALAAVY PD+A G E D +ELSVRGT MTTLRSTLR+C +SALA RFDEDKWPA KKD+DSNGRRVIDCKP+VFSKVLDVLRMA RA WAG E Q +NE PRVT+K GDR+AFEEFV M F GCES I++ V L DE A
Sbjct: 184 VDRGQAFGPTFGGGHDLKENWNRTKTTPKTGNYTYDVPVGSPFLQLNGCPIVDIETFRVCPKPTNTSSSAK-------------------------GNLTPYKTQWRRRHL-------------TTTYATALAAVYCPDMAMGLEVDFMELSVRGTRMTTLRSTLRVCPDSALATRFDEDKWPAAKKDLDSNGRRVIDCKPAVFSKVLDVLRMATRASWAGSEKSQQVNEKPRVTMKVGDRVAFEEFVGMNFPGCESCILDFVDLRHDEEA 416
BLAST of mRNA_Ecto-sp13_S_contig7478.18666.1 vs. uniprot
Match: D7G2H5_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H5_ECTSI) HSP 1 Score: 233 bits (594), Expect = 4.760e-69 Identity = 139/301 (46.18%), Postives = 179/301 (59.47%), Query Frame = 1
Query: 1 MLKEEGKGRGTSSFQPMKWGIKDGQSGSAVYRRHEHGPTFGAGHDLHLCWNGAAS-TVKTNNSTYDVPAGSLFLQLNRRSLVDVETFRVCPTPTCTLPLAKQ--------EHHAGESISAPTAPVRTSDDVPTFGHLIAGSLMEAEMTLQDAGIELSLANARTTACATALAAVYGPDVANGEEEDVVELSVRGTEMTTLRSTLRICLNSALAARFDEDKWPAGKKDIDSNGRRVIDCKPSVFSKVLDVLRMAKRARWAGGEDLQGMNETPRVTIKAGDRLAFEEFVDMYFEGCESFIMEHV 876
MLK+ G G +SFQP+KWG +D G V GP FG DL + +N T++ +YDVP+GS F LN +++ ++E F+V T +K+ H A + S TA + D TFG+ IAG+LME + L A EL A+++ A ALAAVYGP+VA G + VVELSVRGT MTTLRSTL+ C SALAA F+EDKWP KD+D GRR+I+C P+VF KVLDVLRM KRA WA + E V + A DR AF+ FV+MYF G E+FI + V
Sbjct: 253 MLKDSDMG-GPNSFQPVKWGKRDNNGGCDVVVGASRGPYFGRT-DLVVNFNNYFPVTLQAQPYSYDVPSGSTFPNLNGQTITEIEVFQVYSAAATTSSPSKRLKIQGPEDTHGAVSTSSTNTASREANSDAETFGNAIAGALMEERIALHQAEAELEQAHSKAAASGDALAAVYGPEVARGAIDTVVELSVRGTRMTTLRSTLQACRESALAALFNEDKWPPTDKDVDEQGRRLINCSPAVFQKVLDVLRMRKRAAWAASD-----RELAHVRVDAADRPAFDSFVNMYFPGFENFITDMV 546
BLAST of mRNA_Ecto-sp13_S_contig7478.18666.1 vs. uniprot
Match: D7FIV0_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV0_ECTSI) HSP 1 Score: 211 bits (536), Expect = 1.200e-60 Identity = 138/299 (46.15%), Postives = 166/299 (55.52%), Query Frame = 1
Query: 37 SFQPMKWGIK-DGQSGSAVYRRHEHGPTFGAGH--DLHLCWNGAASTVKTNNSTYDVPAGSLFLQLNRRSLVDVETFRVCPT--------PTCTLPLAKQEHHAGESISAPTAPVRTSDDVPTFGHLIAGSLMEAEMTLQDAGIELSLANARTTACATALAAVYGPDVANGEEEDVVELSVRGTE----MTTLRSTLRICLNSALAARFDEDKWPAGKKDIDSNGRRVI-DCKPSVFSKVLDVLRMAKRARWAGGEDLQGMNETPRVTIKAGDRLAFEEFVDMYFEGCESFIMEHVSLL 885
+FQP WG++ S Y + G FG G DL + W T+ N Y VP G F++L R++ DVE FRV T PT T + + ++SA +DV FG IAGSL + L A EL AN A ALAAVYGP A G ++ +VELSVRG+ MTTL STL+ C SALAARFDE KWP +KD D++GRRV+ DC PSVFSKVLDVLRM KR WAG + G V IK DR FEEFV+MYF GCESFIM+ V L
Sbjct: 243 NFQPAIWGLRIRNPKPSGAYDMEKFGLIFGRGRIFDLSVVWTN--QTLVAGNQVYAVPPGFQFIRLGGRAIADVEVFRVRQTMGTLPTTPPTVTGLIDCAAYFEASAMSAE----EHENDVYRFGTSIAGSLKDERAALHTAQRELVQANTMAAASLKALAAVYGPHTAAGVKDPIVELSVRGSRTTERMTTLLSTLQACPESALAARFDEAKWPVTEKDKDAHGRRVMKDCSPSVFSKVLDVLRMKKREAWAGDDGKMGA--AVLVAIKDADRAPFEEFVNMYFPGCESFIMDSVKFL 533
BLAST of mRNA_Ecto-sp13_S_contig7478.18666.1 vs. uniprot
Match: A0A6H5L232_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L232_9PHAE) HSP 1 Score: 203 bits (516), Expect = 9.920e-58 Identity = 124/292 (42.47%), Postives = 161/292 (55.14%), Query Frame = 1
Query: 1 MLKEEGKGRGTSSFQPMKWGIKDGQSGSAVYRRHEHGPTFGAGHDLHLCWNGAASTVKTNNSTYDVPAGSLFLQLNRRSLVDVETFRVCPTPTCTLPLAKQEHHAGESISAPTAPVRTSDDVPTFGHLIAGSLMEAEMTLQDAGIELSLANARTTACATALAAVYGPDVANGEEEDVVELSVRGTEMTTLRSTLRICLNSALAARFDEDKWPAGKKDIDSNGRRVIDCKPSVFSKVLDVLRMAKRARWAGGEDLQGMNETPRVTIKAGDRLAFEEFVDMYFEGCESFIMEHV 876
MLK+ G G +SFQP+KW +D G V GP FG DL + + T++ +YDVP+ F LN +++ ++E F+V + IAG+LME + L A EL A+++ ALAAVYGP+VA G + VVELSVRGT MTTLRSTLR C SALAA F+EDKWPA KD+D GRR+I+C P+VF KVLDVLRM KRA WA + E+ V + A DR AF+ FV+M+F G E+FI + V
Sbjct: 275 MLKDSDMG-GPNSFQPVKWSKRDNNGGYDVVVGASRGPFFGRT-DLVVNFTYVPVTLQAQPYSYDVPSVPAFPNLNGQTITEIEVFQV-----------------------------------NICNAIAGALMEERIALYQAEAELEHAHSKAAVSGRALAAVYGPEVARGAIDTVVELSVRGTRMTTLRSTLRACRESALAALFNEDKWPATDKDVDEQGRRLINCSPAVFQKVLDVLRMRKRAAWAASD-----RESAHVRVDAADRPAFDSFVNMFFPGFENFITDMV 524
BLAST of mRNA_Ecto-sp13_S_contig7478.18666.1 vs. uniprot
Match: A0A6H5JCR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCR8_9PHAE) HSP 1 Score: 197 bits (502), Expect = 9.330e-56 Identity = 140/301 (46.51%), Postives = 170/301 (56.48%), Query Frame = 1
Query: 1 MLKEEGKGRGTSSFQPMKWGIKDGQSGSAVYRRHEHGPTFGAGHDLHLCWNGAASTVKTNNSTYDVPAGSLFLQLNRRSLVDVETFRVCPTP-TCTLPLAKQEHHAGESISAPTAPVRTSDDVPTFGHLIAGSLMEAEMTLQDAGIELSLANARTTACATALAAVYGPDVANGEEEDVVELSVRG---TE-MTTLRSTLRICLNSALAARFDEDKWPAGKKDIDSNGRRVI-DCKPSVFSKVLDVLRMAKRARWAGGEDLQGMNETPRVTIKAGDRLAFEEFVDMYFEGCESFIMEHVSLL 885
MLK+ +G + + QP KWG K G +G V R E GP D +C + + YD+P FL R +VD+E FRV PT T T + + +SA +DV FG IAGSL + L A EL AN A ALAAVYGP++A G E+ VVELSVRG TE MTTL STL+ C SALAARFDE KWP K+ D++GRRVI DC P VF+KVLDVLRM KR WA +D + + V IKA DR FE+FV+MYF CESFIM+ V L
Sbjct: 242 MLKDGNEG--SDAVQPSKWGPKVGYTGQVVDGRTE-GPV-----DWVMCLH---RMFTVHCGIYDIPTEHPFLYHMGREVVDIEVFRVLPTSLTVTGLIDCAAYFKCSDMSAE----EHENDVYRFGMSIAGSLRDERAALHTAQRELVKANTIAAASVEALAAVYGPNIAAGVEDRVVELSVRGPRKTERMTTLLSTLQACPESALAARFDEAKWPVTDKEKDAHGRRVIKDCSPLVFAKVLDVLRMKKREAWA--DDDKKVRAAVLVAIKAADRAPFEKFVNMYFPACESFIMDSVKFL 525
BLAST of mRNA_Ecto-sp13_S_contig7478.18666.1 vs. uniprot
Match: D7FIX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX5_ECTSI) HSP 1 Score: 176 bits (447), Expect = 6.430e-49 Identity = 115/288 (39.93%), Postives = 153/288 (53.12%), Query Frame = 1
Query: 40 FQPMKWGIKDGQSGSAVYRRHEHG-----PTFGAGHDLHLCWNGAAS-TVKTNNSTYDVPAGSLFLQLNRRSLVDVETFRVCPTPTCTLPLAKQEHHAGESISAPTAPVRTSDDVPTFGHLIAGSLMEAEMTLQDAGIELSLANARTTACATALAAVYGPDVANGEEEDVVELSVRGTEMTTLRSTLRICLNSALAARFDEDKWPAGKKDIDSNGRRVIDCKPSVFSKVLDVLRMAKRARWAGGEDL---QGMNETPRVTIKAGDRLAFEEFVDMYFEGCESFIMEHV 876
F+P+KWG+K G G+A+ + P FG HD+ + ++ T+ T TYDV S FL LN ++DVE F V P A E + + P ++ FG IA LME M L A +EL A AR A AL +YGP VA GEE+ VVEL+VRG +TTL TL C +S AA E +W GK +D +GR ++C PS FSK+LDV+RM KRA WA +++ G +T RV + DR FE+ V MYF C F+M+ V
Sbjct: 107 FEPVKWGVKSGSQGNALSCCRDSSSQSFRPCFG-NHDMRVDFHPTTGCTLSTGRGTYDVDGESTFLALNGGLVLDVEVFEVRSVPEQVETPASSEIMSWDQ-HIPVDQSLAAEYTLEFGESIADLLMEELMALAYARVELDEAAARARTVARALCVIYGPHVARGEEDPVVELNVRGRSITTLYWTLHACTDSVFAAWLAE-RWSGGK-GVDEDGRYKVNCDPSCFSKILDVMRMRKRAGWAEDDEIVKNAGGGDTIRVRVSEADRENFEDAVKMYFPNCTRFVMDLV 390 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7478.18666.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7478.18666.1 >prot_Ecto-sp13_S_contig7478.18666.1 ID=prot_Ecto-sp13_S_contig7478.18666.1|Name=mRNA_Ecto-sp13_S_contig7478.18666.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=303bp MLKEEGKGRGTSSFQPMKWGIKDGQSGSAVYRRHEHGPTFGAGHDLHLCWback to top mRNA from alignment at Ecto-sp13_S_contig7478:636..1544- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7478.18666.1 ID=mRNA_Ecto-sp13_S_contig7478.18666.1|Name=mRNA_Ecto-sp13_S_contig7478.18666.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=909bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7478:636..1544- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7478:636..1544- >mRNA_Ecto-sp13_S_contig7478.18666.1 ID=mRNA_Ecto-sp13_S_contig7478.18666.1|Name=mRNA_Ecto-sp13_S_contig7478.18666.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=909bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7478:636..1544- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |