mRNA_Ecto-sp13_S_contig7447.18630.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7447.18630.1
Unique NamemRNA_Ecto-sp13_S_contig7447.18630.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7447.18630.1 vs. uniprot
Match: D8LK21_ECTSI (Possible Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK21_ECTSI)

HSP 1 Score: 577 bits (1487), Expect = 8.420e-206
Identity = 296/314 (94.27%), Postives = 303/314 (96.50%), Query Frame = 1 
Query:   43 MDAPDAYDPNNPNTSSS-TARGAGRGGGGVVQRNDSAAGSNFGSSXXXXXXSGNAVATLSVGDGKHSFREFYSKRFSRSFDLGKKLGEGAFAEVFEATVKGDRPGGKSYAVKRTVRRGLAKEDEKGLLEEVRILRLLQHSNVVTIYQFFKDDPDYYYMVMENMAGGELFDRIVQKSYYNEEEARDLCRVLLDSIKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAK 981
            MDAPDA+DPNNPNT  S TAR    GGGGVVQRNDSAAGSNFGSS XXXX SGNAVATLS GDGKHSFREF+SKRFSRSF+LGKKLGEGAFAEVFEATVKGDRPGGKSYAVKRTVRRGLAKEDEKGLLEEVRILRLLQHSNVV IYQFF+DDPDYYYMV+ENMAGGELFDRIVQKSYYNEEEARDLCRVLLDS++YCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAK
Sbjct:    1 MDAPDAFDPNNPNTWWSWTARDVRGGGGGVVQRNDSAAGSNFGSSAXXXXGSGNAVATLSGGDGKHSFREFHSKRFSRSFNLGKKLGEGAFAEVFEATVKGDRPGGKSYAVKRTVRRGLAKEDEKGLLEEVRILRLLQHSNVVAIYQFFQDDPDYYYMVLENMAGGELFDRIVQKSYYNEEEARDLCRVLLDSVRYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAK 314
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BLAST of mRNA_Ecto-sp13_S_contig7447.18630.1 vs. uniprot
Match: A0A6H5K8A8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8A8_9PHAE)

HSP 1 Score: 358 bits (920), Expect = 5.350e-120
Identity = 174/246 (70.73%), Postives = 204/246 (82.93%), Query Frame = 1 
Query:  247 EFYSKRFSRSFDLGKKLGEGAFAEVFEATVKGDRPG-GKSYAVKRTVRRGLAKEDEKGLLEEVRILRLLQHSNVVTIYQFFKDDPDYYYMVMENMAGGELFDRIVQKSYYNEEEARDLCRVLLDSIKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAK 981
            EF  K F  ++ LG  +GEGAF++V+ ATVK   P  G   AVK   R  L KEDE+ LLEEVRILR L+H NV+ IYQFFKDDPD YY+ +E M GGELFDRIV+K++YNE+EARDLCR+LLD+++YCH+LGIVHRDLKPENLLLTS+HDDA +KLADFGFA S++ G VS QCG+PGYVAPEILRA  YGTSVDMWS+GVI+Y LLGGYPPFHDENQTRLFR+IKAG+FKFH EYW +TS EAK
Sbjct:   45 EFDGKDFYDTYHLGNVIGEGAFSKVYSATVKKPGPNQGLQVAVKCIERNNLPKEDEEDLLEEVRILRSLKHPNVIDIYQFFKDDPDNYYVSIEYMRGGELFDRIVKKAFYNEKEARDLCRILLDAVRYCHDLGIVHRDLKPENLLLTSQHDDANVKLADFGFARSIMGGFVSTQCGTPGYVAPEILRAESYGTSVDMWSIGVIVYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWQSTSSEAK 290
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BLAST of mRNA_Ecto-sp13_S_contig7447.18630.1 vs. uniprot
Match: A0A6H5KCN7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN7_9PHAE)

HSP 1 Score: 327 bits (838), Expect = 1.630e-109
Identity = 154/157 (98.09%), Postives = 157/157 (100.00%), Query Frame = 1 
Query:  511 MVMENMAGGELFDRIVQKSYYNEEEARDLCRVLLDSIKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAK 981
            MV+ENMAGGELFDRIVQK+YYNEEEARDLCRVLLDS+KYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAK
Sbjct:    1 MVLENMAGGELFDRIVQKTYYNEEEARDLCRVLLDSVKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAK 157
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BLAST of mRNA_Ecto-sp13_S_contig7447.18630.1 vs. uniprot
Match: A0A835YZ60_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ60_9STRA)

HSP 1 Score: 323 bits (829), Expect = 1.740e-106
Identity = 156/247 (63.16%), Postives = 191/247 (77.33%), Query Frame = 1 
Query:  241 FREFYSKRFSRSFDLGKKLGEGAFAEVFEATVKGDRPGGKSYAVKRTVRRGLAKEDEKGLLEEVRILRLLQHSNVVTIYQFFKDDPDYYYMVMENMAGGELFDRIVQKSYYNEEEARDLCRVLLDSIKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAK 981
            F +F  +    +F LGK LGEGA+A+V E T       G++YAVK   +  LA EDE  LLEEV+ILR L H N++ IYQF++ + D YY+++E M GGELFDRIV+K +Y E+EARDLC++LLD+IKYCH+  IVHRDLKPENLLLTS  DDA IKLADFGFA ++    V+ QCG+P YVAPEILR  PYGTSVDMWS+GVIIY LLGGYPPFHDENQTRLFR+I+AG F+FH+EYW + S +AK
Sbjct:   29 FPDFDGRNLKANFKLGKDLGEGAYAKVVEGTYSVT---GRTYAVKMVRKANLAPEDEADLLEEVKILRQLNHPNIIDIYQFYRQERDNYYVIIEYMRGGELFDRIVKKQFYTEKEARDLCKILLDAIKYCHDRDIVHRDLKPENLLLTSNDDDASIKLADFGFAKALNGSMVTTQCGTPAYVAPEILRHRPYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIRAGKFEFHNEYWGSISSDAK 272
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BLAST of mRNA_Ecto-sp13_S_contig7447.18630.1 vs. uniprot
Match: D8LEF0_ECTSI (Myosin light chain kinase (MLCK) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF0_ECTSI)

HSP 1 Score: 309 bits (792), Expect = 1.030e-96
Identity = 148/253 (58.50%), Postives = 189/253 (74.70%), Query Frame = 1 
Query:  265 FSRSFDLGKKLGEGAFAEVFEATVK--------------GDRPGGKSYAVKRTVRRGLAKEDEKGLLEEVRILRLLQHSNVVTIYQFFKDDPDYYYMVMENMAGGELFDRIVQKSYYNEEEARDLCRVLLDSIKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAK 981
            FS+++ LG  LGEGA+  VF+AT                G     + YAVKR  R GL+ ++E+ ++ E  I+R L H N+V+IY F++DDP ++YMV+E M GGELFDRIVQK YYNE EARD+C   L+++KY H  G+VHRDLKPENLLL SK DD+ I+LADFGFA SVL+G V++QCG+PGYVAPEILR+ PYGTSVDMWS+GVIIY +L GYPPFHDE+Q RL+R+IKAG ++F  EYW++ S EAK
Sbjct:  358 FSKAYQLGNMLGEGAYGMVFKATPALPASLSEEEDGADDGSAAAPREYAVKRIKREGLSDQEEQEVIAEANIMRELDHPNLVSIYDFYQDDPKFFYMVLELMEGGELFDRIVQKQYYNEAEARDVCLTFLEAMKYTHGQGVVHRDLKPENLLLASKSDDSSIRLADFGFAVSVLDGYVTDQCGTPGYVAPEILRSRPYGTSVDMWSIGVIIYIILAGYPPFHDEDQNRLYRKIKAGHYRFDPEYWNDVSSEAK 610
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BLAST of mRNA_Ecto-sp13_S_contig7447.18630.1 vs. uniprot
Match: A0A067CU08_SAPPC (CAMK/CAMK1 protein kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CU08_SAPPC)

HSP 1 Score: 286 bits (733), Expect = 1.550e-91
Identity = 142/242 (58.68%), Postives = 175/242 (72.31%), Query Frame = 1 
Query:  256 SKRFSRSFDLGKKLGEGAFAEVFEATVKGDRPGGKSYAVKRTVRRGLAKEDEKGLLEEVRILRLLQHSNVVTIYQFFKDDPDYYYMVMENMAGGELFDRIVQKSYYNEEEARDLCRVLLDSIKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAK 981
            +K F   + LGKKLGEG F+ V E T K     GK YA+K   ++GL +ED   L EE+ IL+ + H N++T+Y+ F + P YYY+V E M GGELFDRIV+K+YY E+EARDL  +LL++IKYCH+ G+VHRDLKPENLLLTSK DDA IK+ADFGFA    N  ++  CG+PGYVAPEIL+   YG +VD+WS+GVI + LL GYPPFHDENQ RLF  IK GSFKF   YW   S EAK
Sbjct:   33 TKHFDEVYTLGKKLGEGTFSVVKEGTHKAS---GKKYAIKCIKKQGLTQEDLDALHEEISILKKMDHPNIMTLYEVFSE-PAYYYLVTEIMEGGELFDRIVEKTYYTEKEARDLVLILLNAIKYCHDRGVVHRDLKPENLLLTSKSDDAFIKIADFGFAKQDFNASLTTACGTPGYVAPEILKGDSYGKTVDIWSIGVITFILLCGYPPFHDENQKRLFNAIKIGSFKFESPYWDAVSAEAK 270
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7447.18630.1 vs. uniprot
Match: A0A7S2XV40_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV40_9STRA)

HSP 1 Score: 282 bits (722), Expect = 4.310e-90
Identity = 140/240 (58.33%), Postives = 179/240 (74.58%), Query Frame = 1 
Query:  265 FSRSFDLGKKLGEGAFAEVFEATVKGDRPGGKSYAVKRTVRRGLAKEDEKGLLEEVRILRLLQHSNVVTIYQFFKDDPDYYYMVMENMAGGELFDRIVQKSYYNEEEARDLCRVLLDSIKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVL-NGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAK 981
            F +S+ L K+LG G+F+ V E   K +   G+ +AVK   R  L  +DE+ L+EEV IL+ + H N++ +Y+FF ++  +YY+V+E M GGELFDRIVQK+YYNE+EARDL  +LL +IK+CH+ GIVHRDLKPENLLLTS  DDA IK+ADFGFA  V  +  ++ QCG+PGYVAPEIL  +PYG +VDMWS+GVI Y LLGGYPPFHDE Q+ LF +I+AG F FH EYW   S EAK
Sbjct:   24 FDKSYKLLKELGSGSFSTVREGVSKLN---GERFAVKIVKRMDLPPDDEEALIEEVTILKHVDHPNIIKLYEFF-EEKHFYYLVIELMEGGELFDRIVQKTYYNEKEARDLVHILLSAIKFCHDNGIVHRDLKPENLLLTSSKDDASIKIADFGFARQVKESNNLTTQCGTPGYVAPEILNGVPYGLAVDMWSIGVITYILLGGYPPFHDEKQSNLFAKIRAGDFVFHPEYWDPVSEEAK 259
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7447.18630.1 vs. uniprot
Match: A0A1V9Z7C8_9STRA (Calcium/calmodulin-dependent protein kinase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z7C8_9STRA)

HSP 1 Score: 283 bits (723), Expect = 5.320e-90
Identity = 140/242 (57.85%), Postives = 176/242 (72.73%), Query Frame = 1 
Query:  256 SKRFSRSFDLGKKLGEGAFAEVFEATVKGDRPGGKSYAVKRTVRRGLAKEDEKGLLEEVRILRLLQHSNVVTIYQFFKDDPDYYYMVMENMAGGELFDRIVQKSYYNEEEARDLCRVLLDSIKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAK 981
            +KRF+  + LGKKLGEG F+ V E T K     GK YA+K   ++GL +ED   L EE+ IL+ + H N++T+Y  F +  DYY +V E M GGELFDRIV+K+YY E+EARDL  +LL++IKYCH+ G+VHRDLKPENLLLTSK DDA IK+ADFGFA    +  ++  CG+PGYVAPEIL+   YG +VD+WS+GVI + LL GYPPFHDENQ RLF  IK G+FKF   YW + S EAK
Sbjct:   36 TKRFNAVYTLGKKLGEGTFSVVKEGTHKET---GKKYAIKCIKKQGLTQEDLDALHEEISILKKMDHPNIMTLYDVFSEQSDYY-LVTEIMEGGELFDRIVEKTYYTEKEARDLVLILLNAIKYCHDRGVVHRDLKPENLLLTSKSDDAFIKIADFGFAKQDFSASLTTACGTPGYVAPEILKGESYGKTVDIWSIGVITFILLCGYPPFHDENQKRLFNAIKIGAFKFESPYWDSVSAEAK 273
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7447.18630.1 vs. uniprot
Match: A0A1V9ZM88_9STRA (Calcium/calmodulin-dependent protein kinase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZM88_9STRA)

HSP 1 Score: 282 bits (721), Expect = 9.410e-90
Identity = 143/260 (55.00%), Postives = 181/260 (69.62%), Query Frame = 1 
Query:  202 AVATLSVGDGKHSFREFYSKRFSRSFDLGKKLGEGAFAEVFEATVKGDRPGGKSYAVKRTVRRGLAKEDEKGLLEEVRILRLLQHSNVVTIYQFFKDDPDYYYMVMENMAGGELFDRIVQKSYYNEEEARDLCRVLLDSIKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAK 981
            A A     +G  +  E  +K F   + LGKKLGEG F+ V E T K     GK YA+K   ++GL +ED   L EE+ IL+ ++H N++T+++ F +   YYY+V E M GGELFDRIV+K+YY E+EARDL  +LL++IKYCH+  +VHRDLKPENLLLTSK DDA IK+ADFGFA   +N  ++  CG+PGYVAPEIL+   YG +VD+WS+GVI + LL GYPPFHDENQ RLF  IK GSFKF   YW   S EAK
Sbjct:   14 AEAAAKAPEGAAAPAEGEAKHFDAVYTLGKKLGEGTFSVVKEGTHKVT---GKKYAIKCIKKQGLTQEDLDALHEEISILKKMEHPNIMTLHEVFSETA-YYYLVTEYMEGGELFDRIVEKTYYTEKEARDLVLILLNAIKYCHDRNVVHRDLKPENLLLTSKSDDAFIKIADFGFAKQDMNASLTTACGTPGYVAPEILKGESYGKTVDIWSIGVITFILLCGYPPFHDENQKRLFNAIKVGSFKFESPYWDAVSAEAK 269
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7447.18630.1 vs. uniprot
Match: B8C8L4_THAPS (Myosin light chain kinase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C8L4_THAPS)

HSP 1 Score: 276 bits (705), Expect = 8.750e-88
Identity = 133/240 (55.42%), Postives = 175/240 (72.92%), Query Frame = 1 
Query:  265 FSRSFDLGKKLGEGAFAEVFEATVKGDRPGGKSYAVKRTVRRGLAKEDEKGLLEEVRILRLLQHSNVVTIYQFFKDDPDYYYMVMENMAGGELFDRIVQKSYYNEEEARDLCRVLLDSIKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLN-GPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAK 981
            F  S+  GK LGEGAF+ V EAT K      +SYAVK   +  L KEDE  L +E+ +L  L+H +++ +Y+ F ++P YYY+V E M GGELFDRIV KSYYNE+EARD+C++L +SI +CH   + HRDLKPENLLL ++ +D+ IK+ADFGFA  VL    ++ QCG+PGYVAPEIL  +PY T  DMWS+GVIIY LLGGYPPF ++NQ  LFR+I+ G ++FH+EYW + S +AK
Sbjct:   31 FDGSYKRGKTLGEGAFSVVIEATKKDTD---ESYAVKVVTKSKLTKEDEVALKDEIAVLNELKHQHIIRLYEVF-EEPSYYYLVTEQMRGGELFDRIVSKSYYNEKEARDVCKILFESIGFCHSKSVAHRDLKPENLLLRAEDNDSDIKIADFGFAKKVLTPNSLTTQCGTPGYVAPEILEGVPYDTKSDMWSLGVIIYILLGGYPPFIEQNQRELFRKIRKGQYEFHEEYWGSVSDDAK 266
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7447.18630.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK21_ECTSI8.420e-20694.27Possible Ca2+/calmodulin-dependent protein kinase,... [more]
A0A6H5K8A8_9PHAE5.350e-12070.73Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5KCN7_9PHAE1.630e-10998.09Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A835YZ60_9STRA1.740e-10663.16Kinase-like domain-containing protein n=1 Tax=Trib... [more]
D8LEF0_ECTSI1.030e-9658.50Myosin light chain kinase (MLCK) n=1 Tax=Ectocarpu... [more]
A0A067CU08_SAPPC1.550e-9158.68CAMK/CAMK1 protein kinase n=2 Tax=Saprolegnia TaxI... [more]
A0A7S2XV40_9STRA4.310e-9058.33Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1V9Z7C8_9STRA5.320e-9057.85Calcium/calmodulin-dependent protein kinase n=1 Ta... [more]
A0A1V9ZM88_9STRA9.410e-9055.00Calcium/calmodulin-dependent protein kinase n=1 Ta... [more]
B8C8L4_THAPS8.750e-8855.42Myosin light chain kinase n=1 Tax=Thalassiosira ps... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7447contigEcto-sp13_S_contig7447:709..6466 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score290.0
Seed ortholog evalue1.3e-75
Seed eggNOG ortholog112098.XP_008614051.1
Model size981
KEGG koko:K08794
KEGG Pathwayko04921,ko04925,map04921,map04925
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0032@1,KOG0032@2759
Ec32 ortholog descriptionPossible Ca2 /calmodulin-dependent protein kinase, EF-Hand protein superfamily
Ec32 orthologEc-06_007870.1
EC2.7.11.17
Cds size981
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464014.0114381-CDS-Ecto-sp13_S_contig7447:708..8671681464014.0114381-CDS-Ecto-sp13_S_contig7447:708..867Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7447 709..867 -
1681464014.0234773-CDS-Ecto-sp13_S_contig7447:2081..23391681464014.0234773-CDS-Ecto-sp13_S_contig7447:2081..2339Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7447 2082..2339 -
1681464014.0412173-CDS-Ecto-sp13_S_contig7447:3057..31921681464014.0412173-CDS-Ecto-sp13_S_contig7447:3057..3192Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7447 3058..3192 -
1681464014.0526626-CDS-Ecto-sp13_S_contig7447:4367..45341681464014.0526626-CDS-Ecto-sp13_S_contig7447:4367..4534Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7447 4368..4534 -
1681464014.0643263-CDS-Ecto-sp13_S_contig7447:6204..64661681464014.0643263-CDS-Ecto-sp13_S_contig7447:6204..6466Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7447 6205..6466 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7447.18630.1prot_Ecto-sp13_S_contig7447.18630.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7447 709..6466 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7447.18630.1

>prot_Ecto-sp13_S_contig7447.18630.1 ID=prot_Ecto-sp13_S_contig7447.18630.1|Name=mRNA_Ecto-sp13_S_contig7447.18630.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=327bp
LQSAAYRFAKQYDCMDAPDAYDPNNPNTSSSTARGAGRGGGGVVQRNDSA
AGSNFGSSAGSNSGSGNAVATLSVGDGKHSFREFYSKRFSRSFDLGKKLG
EGAFAEVFEATVKGDRPGGKSYAVKRTVRRGLAKEDEKGLLEEVRILRLL
QHSNVVTIYQFFKDDPDYYYMVMENMAGGELFDRIVQKSYYNEEEARDLC
RVLLDSIKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNG
PVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQ
TRLFRRIKAGSFKFHDEYWSNTSLEAK
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mRNA from alignment at Ecto-sp13_S_contig7447:709..6466-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7447.18630.1 ID=mRNA_Ecto-sp13_S_contig7447.18630.1|Name=mRNA_Ecto-sp13_S_contig7447.18630.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5758bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7447:709..6466- (Ectocarpus species13 EcNAP12_S_4_19m)
CTGCAGTCCGCGGCGTATCGCTTTGCGAAGCAATACGACTGCATGGATGC
GCCCGACGCGTACGACCCAAACAACCCCAACACGTCGTCCTCGACAGCGA
GGGGCGCGGGGAGGGGCGGGGGGGGGGTGGTACAGCGCAACGACAGCGCC
GCGGGGAGCAACTTCGGCAGCTCGGCCGGGAGCAACTCCGGCAGCGGCAA
CGCCGTGGCGACTCTGTCGGTAGGAGACGGGAAGCACTCCTTCCGCGAGT
TCTACAGCAAGCGTGAGTGATGTTGTCGTTGTCTGCCCTCCTCGTAAGCA
ACACCTAGCTGCCGTGTGCGTGTTTTTTTATTATCATCGACCGCGCTAAC
CGGCTGACCAATGAAAAGACGTCAGTCTCAGGGTGCGTGTGTGTGTGTTG
CCCCGTCCGTCTTTACTGGCGACTGCTCTTGTCCACACCTCTCTTTCGGT
GTACCTTTGTTGCCGACCTGTCAGCCGGCGTCGCACGACGACAATATTAA
ACGAACCAATTTCAGCCAACATGCGTTGTGCACCAACTTTCAACACACAT
GCGTTGCAGTATGTAGTAGTACTGCTGTACCGACGTCTTCCCCGCCAAAC
AAGAAACAAGAAACAAATGTTTTCCAATTCAGGAACACGTGTCCGCCTTG
ACTCTTCCGGTCAACGTCTTTAGGAGGCAAATGATGTATGCGTCGTGCGG
TTGTGCCACAAAGTCGTCTGGTAGGTTAGAGCATGCATGTATAGCGCGTG
TCTCTCTGCTATGTTCCGTGCCTCTCGTACGCAACCAAGCACGACGTTAA
ACGGAACATACTACATTTTAAGCTGCCTTGTCTCAGATGTGCTATCCTAT
GGTAGACGTGATCTCGAAGGCTCAGCCTAAACTTTGATCACAAGACCCGT
GTTACGGAGGAAAAATAAGCCGGCATCCAACCCACTCGTTCACCCCTTCT
GCGCTCGCCGCGGCTGCTGCTGTGGGCGCACCAGTCGATACCCTGCCTGG
CCTATGGGGCATCCTCGGGGCAGTTACAGCCTAGTCTTCTAGCGGTGACG
CGCCCTCCGAACGTCAGTTACGCCCAAAAAGAGAGGCGGCCTAGCCTTGG
CTAGACCCTTGCTTGTGAAGATACGTGAGATTCGTTGTCATGATGTCATG
TTTGGCAACAAGGCTCTATGGCTGGCTCGGATACCCCCCAAACAGACTGA
CAAATAGCACAACCATCAGAGGCAGCGCTTCTTGTGTCGGAAACTTATCT
TTACCCACCCCCCCTTTGCGGTAACCATAGTCGTGGTCGAGTAGATCATG
TTGTGCGAGGTCGAGAACCCTCACTCCGCGCAAGGGGGATAATCGCACCA
CGTTGTGTTAAAAGTGGTCAAGCACCCTCGAGGCAGTTACACATTGTGCT
TATGACTTGTCTCTGGAAGTGGAAGCACCAGAAAATAATCAAGTCATACG
CAGCTGTCATCCGTACGCATGGAAGGAATTCAGCACAAGATGCCGAACAT
CCTTAGCAGGATGCAGTGCACCCTTCATGCGACTGGCCGAATACCTCACG
GCGCTTCGCGCTTGGTGATGTGAGAGCCTGGTCCGGTGAAAACCCGGTGT
GCCCCGTCTCGGCTTTGATGTGAGGTCAACGGTCTAACGACTACGGCATG
CATGACTATGAGTACACTCGGAACACGGTCTAACACGGTCTAACGACTAC
GGCATGCATGACTATGTGAGTACACTCCCCCCTTTGGCAAAAGTACTGTA
GGAAGGAAAGGTGAGCGGTCCTGTGTGTACATTGCTCCGTCCTGACAATG
TTCCGTCCTCTCGAGCACGCGTGGTCAATGGTCTCACCGCTGAAAGGCAT
GCGAAACATGAGACCCCCCCCCCCCCCCCCCCGGTGTCCCCCTCAACCCC
AAAACGGGGCCCACTCTTTCCGTTTTTGACAGGATTCTCGCGATCATTCG
ATCTGGGTAAGAAGCTCGGAGAGGGGGCTTTCGCGGAGGTATTCGAGGCG
ACGGTCAAGGGCGACCGACCGGGGGGGAAGTCGTACGCGGTCAAGCGGAC
CGTCCGGCGAGGGCTAGCGAAGGAGGACGAGAAGGGGTTGCTCGAAGAGG
TGTTCGAGTTTGCATACCGCGTTCATGTTTGTTTGTTTGTCGTCACCATC
GACCGCGCTTTACCGGCTGACAAGAAAATTATGTGTATACTGTATGCCAT
GTGTGCATACGGAAGAACAGCGGGCGTTGTCGCGGGTCTTTCGTTCGTGT
TACGATGGCAACCAACCGGTACGTCAGTCGTCCCTCGGTTTAAGGACGCG
CATGGTCCTTCGTTTAAACAGGTGTCCTTAAGTCACCGTGCTTGGAAATA
AAGAGTCGTCCTTGCCCGGGGGAGTGTCCTTAAAAATGGCGTCCTCACCC
GAGGGATGACGGTAGTTAGTGGTGGGCTTACGGGGAGAGCGAGACGCTCG
AGTCCCCTGCTTGGGCGATAGTTTTGGCCTCCCCCTTGTTTCGTTCCCCC
CATCCTGGACAGAATGAGGGCCTGCCGACGTCGCGAACGTCATTTTTTGC
GTGTAATTTTGGTGCGCGTGCTGCCGTTACGAAGACGCCTTTCCGTCGTA
GATGCTCTGCACCTTTGTCGGCGGAGGTCAAACAACCCTATGCACGAGAG
GGGGGTAGGGGTGGGGGGGGGGTCGATCCTCCGTCTGTGCTTCTTCTCGA
GACGGAGTGTTTGGCTGCTACACGGCAGCACGTTGCCCCGAGATTATAGC
ATGTCAACGGCGTCGTTGCGCGGTGGGCGACGGGCGAATTGGCTCACACG
CGTTGCGCGACTCGGCGAATGGCCGGCCGGCCACTTGTTTTCAGCGGACT
GGTCTGGTGTACCGGGGCGAGGGTGCGGCGTTTGAGTGCGTGGACTCAAG
CGGGCCATGCATGCACGGTACAGACGGGAACAGCAGTATCCGTGCGACAT
ACAGCAGTAGTATGTCCTCCGTTCAATCAACAGCAGTTGAGAAACACAAA
TCATAATTCACACATGCGGCGAAGCTTTGTGAATGTCGTTCCATCGGACC
CCGCCCGTGTTCCCGTGTCCGTTGTTGTAACTACCGTCCCCAATACTTCC
TTCTGTTGACACACGCCGAGCTGTGGCTGTGAGCCTTGGCGTGTTCCTGC
CCCCCCTACCCCTTCAATCTTCAATCTCCGATCTCAGTTGTTGTTGCTGC
TGCTGCTGCTGCTGCTCCGCCGTGTCCCTTCGTTGGCGTGGTGCCGGTGA
TGCCTGCCTCTGAACGAAAAAAAGGTGCGGATACTCCGCCTCCTGCAGCA
CTCGAACGTGGTGACCATTTACCAGTTCTTCAAGGACGATCCCGACTACT
ACTACATGGTGATGGAGAACATGGCGGGGGGCGAGCTGTTCGACCGCATC
GTTCAGAAGGTGGGAGACATCCCGGAGATAAAAAAATGAAAAGGTTCGAT
GACAGCGGGATTACCATCGAGATACGTCTTTCGTTCTCACAAGCTCGGAA
GGGTGGGAGGAGGGACGGAGCGAGAATGAGGAAGCAGTCGTGCCCTTCGA
GAGCATTTCAATCTGGTTTTAGGAAATAGGGGTTACGGTGTGGGGTTCGG
GGGAAGGATTTTGGAATACGGAACCCCTCCTCTATTTTCTAGTATCCCAA
AACACCAGTATCCTTGGAAAGGCGATCCAGAGAAAGAGAAGTGGAGTACA
TGGTACCGGCGGGGTGGGGGCACACCACACGCGTGACTTGACGGCCATTT
TTTGTCGGTGGTGTGGTGCGGTGTGGTGTTGGTCGTTGCCATCATGTCGA
AAGCTTTGTCGGTACTTCGGTACCAGGCTGACGTATTTTCATTGTTCGAC
TGGTTAAAGCGCGGTCGATGCTACAGAGTCAAGACACACGCACGCCCAGA
TCATGGTCTTGACCTCTATGTATGGAAGCATTTTCTATTTTCAGCCGCAC
TGAGACTGATGCCTTTGCAGGTGGTCGGCCAGTTGTACATAGCGCGGTCG
ATGCCACTAACAAAAGGCACACACGCACGCACGCACACGCGTGCCTGCTT
ACCTGCTTGCCTGCTTGCCTTCTTGTCTGCTTGCTTGCTTAACCGCCGCC
CACCGCAACCCGCCGCCGCCGCCTCAGTCGTACTACAACGAAGAGGAGGC
GAGAGACCTGTGCCGCGTCCTCCTGGACTCGATCAAGTACTGCCACGAGC
TGGGCATCGTCCACCGGGACCTCAAACCCGAGAACCTCCTCCTCACCTCC
AAGCACGACGACGCCGGCATCAAGCTCGCGGACTTCGGGTTCGCCTGCAG
CGTGCTCAACGGCCCCGTGTCGGAGCAGTGCGGGTCGCCGGGTTACGTGG
CGCCGGAGATCCTCAGGGCGCTGCCGTACGGGACGGTAAGAGCATACAGT
AACATTTTTTGCGACATTTTTTTTCGTTTTATGGGTGGTAGACTTTGTTG
TTTTTTTGCGGGGTGTAGGGGAGGGGGATGTCCCGTGTCGGAGCAGTGCG
GGTCGCTGGGGTACGTGGCGCCGGAAGTCCTCTGGGCGCTGCCGTACGGG
ACGGTAAAAGAGCATTGAAAAGACCACTTTATTGTGCGAGTTTTTCATTG
ACGGTAGAGTTCATTTGTTTGCGGGGGGGGGGGACAGGGGGTACCACTCA
TGTATTGAATGCCTCACTTGTTGTTCGGCCATTGACCACGCGCCCTCGAG
AGGACGGAGCATTGTTCCCACAGGACCGACCACCGATGTTCAATCTTTCC
TTCCCACTATGCTGGGGGGGCGGGGGCGGTGTACTCAACCGGTGTTACGT
AGCCTCTGCTGTCTCAGTACTGCGACGCATTGCACCGCTCCCACTCCGTA
AGCTGCAGTACACCGCCGATGTTCGGACCCTTGCTTTATAGCGCGCGTCT
GACTCGTGTCTTTAGGCGCGGGGGGGGCACGAAGGCGGGGGTAGTCTTAG
CTGTTGCTCGGGGCCATCCCGCAAAACGTGACCCGTGGTGATTGGAACAC
AATGCGCGTGTTTTTGAGACGGGGGGCACGGGCGTGACAGCTGCTCCGGC
GACAAGGTGTGTCACTTCTGTCGCAGAGACAAGAGGAGGAGGAGGAGGGG
GGGGGAGGCGCGTAAAGCACTGCCCTCCGTCGTGAGGAGGCGGGACGGGC
GGGGGCGGGGGTTCCTCCACAGGAGACGTGAAAGCAAAGGAGGGGGTGTT
GTTGTCAACGTCACTGCGTTGATCACAGACGGCACCGCAATAACGTGTGG
AGGCGGAACGTGGGGCCCCAAGTCTTTCTCGCTGCAAAGTCATGAAGACC
AAACGCACCAGTTTCGCCGTGGTGCGCCTTGTGCCCCCCTGCTCCTGTCT
TGCCCGCACCCCGACGTTTTTGGGGGGGTGGGCTTATGACCACGGGAAAT
TACTGTTTTTTTGTCTCACGACGACAGGGGCTGATTTCACTTCCTTTGTC
TATCCCTCTCTCTCACACACACACCACTTGGCTCTTACTAAACCACTTTT
TTTGTTGCGATCTCTGCCCATTTTGCTTGCTCCTTGTCCTTGCTGTGCCA
TCCATGTCTTGGATATTTCCCCGGAACAAAAAACAAAACAAAAAAAAAGT
CGGTGGACATGTGGAGTGTGGGCGTAATCATCTACACCTTGCTCGGGGGC
TACCCGCCCTTCCACGACGAGAACCAGACGCGATTGTTCCGCCGCATCAA
GGCCGGGAGCTTCAAGTTTCATGACGAGTACTGGAGCAACACCTCGCTCG
AGGCCAAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7447:709..6466-

>mRNA_Ecto-sp13_S_contig7447.18630.1 ID=mRNA_Ecto-sp13_S_contig7447.18630.1|Name=mRNA_Ecto-sp13_S_contig7447.18630.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=981bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7447:709..6466- (Ectocarpus species13 EcNAP12_S_4_19m)
CTGCAGTCCGCGGCGTATCGCTTTGCGAAGCAATACGACTGCATGGATGC
GCCCGACGCGTACGACCCAAACAACCCCAACACGTCGTCCTCGACAGCGA
GGGGCGCGGGGAGGGGCGGGGGGGGGGTGGTACAGCGCAACGACAGCGCC
GCGGGGAGCAACTTCGGCAGCTCGGCCGGGAGCAACTCCGGCAGCGGCAA
CGCCGTGGCGACTCTGTCGGTAGGAGACGGGAAGCACTCCTTCCGCGAGT
TCTACAGCAAGCGATTCTCGCGATCATTCGATCTGGGTAAGAAGCTCGGA
GAGGGGGCTTTCGCGGAGGTATTCGAGGCGACGGTCAAGGGCGACCGACC
GGGGGGGAAGTCGTACGCGGTCAAGCGGACCGTCCGGCGAGGGCTAGCGA
AGGAGGACGAGAAGGGGTTGCTCGAAGAGGTGCGGATACTCCGCCTCCTG
CAGCACTCGAACGTGGTGACCATTTACCAGTTCTTCAAGGACGATCCCGA
CTACTACTACATGGTGATGGAGAACATGGCGGGGGGCGAGCTGTTCGACC
GCATCGTTCAGAAGTCGTACTACAACGAAGAGGAGGCGAGAGACCTGTGC
CGCGTCCTCCTGGACTCGATCAAGTACTGCCACGAGCTGGGCATCGTCCA
CCGGGACCTCAAACCCGAGAACCTCCTCCTCACCTCCAAGCACGACGACG
CCGGCATCAAGCTCGCGGACTTCGGGTTCGCCTGCAGCGTGCTCAACGGC
CCCGTGTCGGAGCAGTGCGGGTCGCCGGGTTACGTGGCGCCGGAGATCCT
CAGGGCGCTGCCGTACGGGACGTCGGTGGACATGTGGAGTGTGGGCGTAA
TCATCTACACCTTGCTCGGGGGCTACCCGCCCTTCCACGACGAGAACCAG
ACGCGATTGTTCCGCCGCATCAAGGCCGGGAGCTTCAAGTTTCATGACGA
GTACTGGAGCAACACCTCGCTCGAGGCCAAG
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