mRNA_Ecto-sp13_S_contig74185.18599.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig74185.18599.1 vs. uniprot
Match: A0A6H5J5Q6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J5Q6_9PHAE) HSP 1 Score: 121 bits (304), Expect = 9.130e-31 Identity = 58/60 (96.67%), Postives = 59/60 (98.33%), Query Frame = 1
Query: 1 QARLFPGCAFVVGADTAKRIIDPRYYGNSQVEMVSALSEIRHLGCSFIVGGREDAGGRFL 180
+ARLFPGCAFVVGADTAKRIIDPRYYGNSQVEMVSALSEIRHLGCSFIVGGRED GGRFL
Sbjct: 565 KARLFPGCAFVVGADTAKRIIDPRYYGNSQVEMVSALSEIRHLGCSFIVGGREDVGGRFL 624
BLAST of mRNA_Ecto-sp13_S_contig74185.18599.1 vs. uniprot
Match: A0A8J7TW02_9BACT (CTP_transf_like domain-containing protein n=1 Tax=Zavarzinella sp. TaxID=1914240 RepID=A0A8J7TW02_9BACT) HSP 1 Score: 82.0 bits (201), Expect = 6.050e-18 Identity = 37/60 (61.67%), Postives = 43/60 (71.67%), Query Frame = 1
Query: 1 QARLFPGCAFVVGADTAKRIIDPRYYGNSQVEMVSALSEIRHLGCSFIVGGREDAGGRFL 180
+A LFPGC FVVGADTA R++ PR+YG M+ AL EIR C F VGGR DAGGRF+
Sbjct: 101 KAALFPGCVFVVGADTAARVVHPRFYGEDPAAMLRALDEIRAAACRFFVGGRVDAGGRFV 160
BLAST of mRNA_Ecto-sp13_S_contig74185.18599.1 vs. uniprot
Match: A0A538RXG2_9BACT (CTP_transf_like domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A538RXG2_9BACT) HSP 1 Score: 81.6 bits (200), Expect = 1.190e-17 Identity = 36/60 (60.00%), Postives = 45/60 (75.00%), Query Frame = 1
Query: 1 QARLFPGCAFVVGADTAKRIIDPRYYGNSQVEMVSALSEIRHLGCSFIVGGREDAGGRFL 180
+A LFPG FVVGADTA+R+ PRYY NS+ M A + +RHLGC F+V GRED+ GRF+
Sbjct: 107 KASLFPGVVFVVGADTAERLAMPRYYHNSEAGMAEAFARVRHLGCRFLVAGREDSSGRFV 166
BLAST of mRNA_Ecto-sp13_S_contig74185.18599.1 vs. uniprot
Match: A0A7S3XRD4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRD4_HETAK) HSP 1 Score: 82.0 bits (201), Expect = 6.310e-17 Identity = 38/60 (63.33%), Postives = 45/60 (75.00%), Query Frame = 1
Query: 1 QARLFPGCAFVVGADTAKRIIDPRYYGNSQVEMVSALSEIRHLGCSFIVGGREDAGGRFL 180
+ARLFP C FVVGADTA R+IDP+YY +EM++ALSEI LGC F+VGGR G FL
Sbjct: 248 KARLFPNCTFVVGADTATRLIDPKYYNGDPLEMINALSEIAVLGCRFVVGGRRVEGRGFL 307
BLAST of mRNA_Ecto-sp13_S_contig74185.18599.1 vs. uniprot
Match: A0A534ZD84_9DELT (CTP_transf_like domain-containing protein n=4 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534ZD84_9DELT) HSP 1 Score: 80.1 bits (196), Expect = 3.290e-16 Identity = 38/60 (63.33%), Postives = 44/60 (73.33%), Query Frame = 1
Query: 1 QARLFPGCAFVVGADTAKRIIDPRYYGNSQVEMVSALSEIRHLGCSFIVGGREDAGGRFL 180
+AR+ PG AFVVG DTA RI+DPRYYG S MV+AL EI LG F+V GR D GGRF+
Sbjct: 301 KARVLPGAAFVVGVDTAARILDPRYYGGSAASMVAALDEIGRLGGRFLVAGRADPGGRFV 360
BLAST of mRNA_Ecto-sp13_S_contig74185.18599.1 vs. uniprot
Match: A0A534RLX3_9DELT (CTP_transf_like domain-containing protein n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534RLX3_9DELT) HSP 1 Score: 75.9 bits (185), Expect = 1.520e-15 Identity = 35/60 (58.33%), Postives = 44/60 (73.33%), Query Frame = 1
Query: 1 QARLFPGCAFVVGADTAKRIIDPRYYGNSQVEMVSALSEIRHLGCSFIVGGREDAGGRFL 180
+ARL PG FVVGADTA+RI+ PRYYG+ +M++AL EI GC F+V GR D GRF+
Sbjct: 104 KARLLPGVTFVVGADTAERIVQPRYYGDRTQDMLAALDEIARHGCRFLVAGRADDQGRFV 163
BLAST of mRNA_Ecto-sp13_S_contig74185.18599.1 vs. uniprot
Match: A0A7R9YBG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBG6_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 2.410e-15 Identity = 35/59 (59.32%), Postives = 44/59 (74.58%), Query Frame = 1
Query: 1 QARLFPGCAFVVGADTAKRIIDPRYYGNSQVEMVSALSEIRHLGCSFIVGGREDAGGRF 177
+A LFPG F+VGADTAKRI+DP+YYG+ MV+A++E+ GCSFIVGGR G F
Sbjct: 332 KAELFPGSVFLVGADTAKRIVDPKYYGDDHENMVAAIAELYAKGCSFIVGGRTTGNGSF 390
BLAST of mRNA_Ecto-sp13_S_contig74185.18599.1 vs. uniprot
Match: A0A7S2RU63_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RU63_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 6.370e-15 Identity = 35/60 (58.33%), Postives = 46/60 (76.67%), Query Frame = 1
Query: 1 QARLFPGCAFVVGADTAKRIIDPRYYGNSQVEMVSALSEIRHLGCSFIVGGREDAGGRFL 180
+AR+FP FV+GADTA+RI+D +YYG++ +EM +AL IR GCSF VGGR+D G FL
Sbjct: 352 KARMFPNSVFVIGADTARRIVDKKYYGHNDMEMAAALGAIRDQGCSFFVGGRQD-GDEFL 410
BLAST of mRNA_Ecto-sp13_S_contig74185.18599.1 vs. uniprot
Match: A0A6L3F066_9CHLR (CTP_transf_like domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L3F066_9CHLR) HSP 1 Score: 76.3 bits (186), Expect = 7.520e-15 Identity = 37/59 (62.71%), Postives = 43/59 (72.88%), Query Frame = 1
Query: 1 QARLFPGCAFVVGADTAKRIIDPRYYGNSQVEMVSALSEIRHLGCSFIVGGREDAGGRF 177
+ARLFPG FVVG DTA RII PRYY NS +M++AL EI+ LGC F+V GR D G F
Sbjct: 284 KARLFPGTTFVVGYDTAVRIIHPRYYDNSPSQMMTALHEIQQLGCHFLVAGRADLQGTF 342
BLAST of mRNA_Ecto-sp13_S_contig74185.18599.1 vs. uniprot
Match: A0A0S8B9W4_9CHLR (CTP_transf_like domain-containing protein n=1 Tax=Anaerolineae bacterium SG8_19 TaxID=1703386 RepID=A0A0S8B9W4_9CHLR) HSP 1 Score: 73.6 bits (179), Expect = 8.410e-15 Identity = 34/59 (57.63%), Postives = 44/59 (74.58%), Query Frame = 1
Query: 1 QARLFPGCAFVVGADTAKRIIDPRYYGNSQVEMVSALSEIRHLGCSFIVGGREDAGGRF 177
+ARLFPG FV G DTA+RI+ PR+Y +SQ +M+SAL+EIR GC F+V R D+ G F
Sbjct: 87 KARLFPGTTFVTGYDTAERILQPRFYADSQDQMLSALAEIRERGCCFLVASRRDSQGIF 145 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig74185.18599.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig74185.18599.1 >prot_Ecto-sp13_S_contig74185.18599.1 ID=prot_Ecto-sp13_S_contig74185.18599.1|Name=mRNA_Ecto-sp13_S_contig74185.18599.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=60bp QARLFPGCAFVVGADTAKRIIDPRYYGNSQVEMVSALSEIRHLGCSFIVGback to top mRNA from alignment at Ecto-sp13_S_contig74185:3..580- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig74185.18599.1 ID=mRNA_Ecto-sp13_S_contig74185.18599.1|Name=mRNA_Ecto-sp13_S_contig74185.18599.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=578bp|location=Sequence derived from alignment at Ecto-sp13_S_contig74185:3..580- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig74185:3..580- >mRNA_Ecto-sp13_S_contig74185.18599.1 ID=mRNA_Ecto-sp13_S_contig74185.18599.1|Name=mRNA_Ecto-sp13_S_contig74185.18599.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=180bp|location=Sequence derived from alignment at Ecto-sp13_S_contig74185:3..580- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |