mRNA_Ecto-sp13_S_contig74.18576.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig74.18576.1 vs. uniprot
Match: A0A6H5KDH3_9PHAE (Smr domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDH3_9PHAE) HSP 1 Score: 1251 bits (3236), Expect = 0.000e+0 Identity = 668/790 (84.56%), Postives = 700/790 (88.61%), Query Frame = 3
Query: 180 MWQSDGRAPRGHSKGQGKQRGRAPRXXXXXXXGGYRILVLAGIPGSGKSTLASFLEDMGWSVVNQDTLGSREKCRRRAQQVLEKGGRVLIDRCNFDQSQRVTWLDLAVSLSLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGLSSAGIVKRVARDFRPPHRKEGFHTVLRCHGDQDLSEAIALLSLTAGSDGAPGTERTPAPSATAAGSDRVGGDFSGGTGWRRGVDSVGMFPDQSLTEEGSQWNILSCPPGGIGAVATAPAVHHAVDTFFTVEKGATAAGMAAKLPGAAPGQRGGTYLTPAAADAPITRPEDDFGPVLAWGGHQRDAEDTAIXXXXXXXXXXXXXXQQVGAVGPVARTRDAVSNNGRTAAHDATSYPFLPSTMNGSKSGRFVGSLQKQLPHRPKQRGFKSSSLNSIAKLTPQSQAEAPASVKQPVKPKTRLLTPAEISSRFSDLQAPPRLLAPEDVGAAASVRTNRLGTGPTAAAAAKRDKDHSYAQPVVLPLGPNSLEEWTSRSTLPIRGNEESGNTSDSSYRSEEAATAEGGQAYDHRERVNAGSRDGDDQTDEEEVDLEVSDGEAFFVLEDMFGGLLPPETLQNLFAESGKYLEQAVKEGFKVCEGLWGQGEVITFPDSPSSDGTTTDDFVTPSTSAGTDVSTNENGSESWDDETHGEFADVSHWTHKQVDTLTELCLAFEATISRETIIAALTASNHDATSAAQLLLAPGPANPRERGEGGRSRRYRGVAQRERKARPPRSDDSLPTATLLGATCGVDHRAGALGEREWEEE 2549
MWQS+GRAPRG KGQGKQ XXXXXXXGGYRILVLAGIPGSGKSTLASFLEDMGWSVVNQDTLGSREKCRRRAQQVLEKGGRVLIDRCNFDQSQRVTWLDLAVS SLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGL+SAGIVKR A+DFRPPHRKEGFHTVLRCHGDQDLSEAIALLSL+AGSDGAPGTER PAP AT AGSDRVGGD GGTGWRRGVDSVGM DQSL EEGSQWN+ SCPPG +GAVATAP VHHAVD FF VEKGAT AGMA KLPGAAPGQ G TY TPA+ADAP+TRPE D GPVLA GG Q+ GA GPVARTRDAV NNGRTAA+DATS P LPS MNG K GRFVGSL+KQLPHRPKQRGF SSSLNSIAKLT QSQAEA ASVKQ +KPKTRLLTPAEI S FSDLQAPPR+LAPEDVG AAS RT+RLGTGPTAAA KRD+DHS AQPVVLPLGPNS+EEW SRST PI+GNEE+GNT +SSYRSEEAATAEGGQA+DHRERV AG+ DGDDQT+EEE DL+VSDGEAFFVLEDMFGGLLPPETL+NLFAESG YLE+AVKEGFKVCEGLWGQGEVITFPDSPSSDGTTTDDF+TPSTSAGTDVSTNENGS++ DDETHG+FADV HWT KQVDTLTELCLAFEATISRETIIAALTAS+HDATSAAQLLL P PANPRERGEG RSR +RGVAQRERKARPPRSDDSLPTAT LGATCGVDHRAGAL ER+WEEE
Sbjct: 1 MWQSNGRAPRGKYKGQGKQXXXXXXXXXXXXXGGYRILVLAGIPGSGKSTLASFLEDMGWSVVNQDTLGSREKCRRRAQQVLEKGGRVLIDRCNFDQSQRVTWLDLAVSHSLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGLASAGIVKRYAKDFRPPHRKEGFHTVLRCHGDQDLSEAIALLSLSAGSDGAPGTERAPAPPATTAGSDRVGGDLGGGTGWRRGVDSVGMCWDQSLAEEGSQWNMNSCPPGEVGAVATAPTVHHAVDIFFPVEKGATTAGMATKLPGAAPGQGGVTYHTPASADAPMTRPEYDRGPVLACGGQQQVGGG--------------------GAAGPVARTRDAVGNNGRTAANDATSDPSLPSAMNGDKRGRFVGSLEKQLPHRPKQRGFTSSSLNSIAKLTSQSQAEALASVKQSLKPKTRLLTPAEICSNFSDLQAPPRVLAPEDVGVAASARTDRLGTGPTAAATGKRDEDHSCAQPVVLPLGPNSIEEWPSRSTFPIQGNEENGNTGNSSYRSEEAATAEGGQAHDHRERVPAGAWDGDDQTNEEEADLDVSDGEAFFVLEDMFGGLLPPETLENLFAESGNYLEKAVKEGFKVCEGLWGQGEVITFPDSPSSDGTTTDDFLTPSTSAGTDVSTNENGSDTRDDETHGKFADVLHWTPKQVDTLTELCLAFEATISRETIIAALTASDHDATSAAQLLLDPRPANPRERGEGRRSRPHRGVAQRERKARPPRSDDSLPTATSLGATCGVDHRAGALSERQWEEE 770
BLAST of mRNA_Ecto-sp13_S_contig74.18576.1 vs. uniprot
Match: D7FMH4_ECTSI (Smr domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH4_ECTSI) HSP 1 Score: 1083 bits (2800), Expect = 0.000e+0 Identity = 600/733 (81.86%), Postives = 616/733 (84.04%), Query Frame = 3
Query: 360 SVVNQDTLGSREKCRRRAQQVLEKGGRVLIDRCNFDQSQRVTWLDLAVSLSLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGLSSAGIVKRVARDFRPPHRKEGFHTVLRCHGDQDLSEAIALLSLTAGSDGAPGTERTPAPSATAAGSDRVGGDFSGGTGWRRGVDSVGMFPDQSLTEEGSQWNILSCPPGGIGAVATAPAVHHAVDTFFTVEKGATAAGMAAKLPGAAPGQRGGTYLTPAAADAPITRPEDDFGPVLAWGGHQRDAEDTAIXXXXXXXXXXXXXXQQVG---AVGPVARTRDAVSNNGRTAAHDATSYPFLPSTMNGSKSGRFVGSLQKQLPHRPKQRGFKSSSLNSIAKLTPQSQAEAPASVKQPVKPKTRLLTPAEISSRFSDLQAPPRLLAPEDVGAAASVRTNRLGTGPTAAAAAKRDKDHSYAQPVVLPLGPNSLEEWTSRSTLPIRGNEESGNTSDSSYRSEEAATAEGGQAYDHRERVNAGSRDGDDQTDEEEVDLEVSDGEAFFVLEDMFGGLLPPETLQNLFAESGKYLEQAVKEGFKVCEGLWGQGEVITFPDSPSSDGTTTDDFVTPSTSAGTDVSTNENGSESWDDETHGEFADVSHWTHKQVDTLTELCLAFEATISRETIIAALTASNHDATSAAQLLLAPGPANPRERGEGGRSRRYRGVAQRERKARPPRSDDSLPTATLLGATCGVDHRAGALGEREWEEE 2549
S+VNQDTLGSREKCRRRAQQVLEKGGRVLIDRCNFDQSQRVTWLDLAVSLSLHKDACIAVWLDIPI GSDGAPGTER PAP ATAAGSDRVGGDF GGTGWRRGVDSV MF DQSL EEGSQWNI SCPPGG+GAVATAPAVHHAVDTFF VEK ATAAGMAAKLPGAAPGQ G TY TPAAADAP+TRP DDFGPVLAWG QR AEDTAI XXXXXXXXXXXX QQVG A GPVARTRDAV NNG TAAHDATSYP LPS MNG+KSGRFVGSLQKQLP RPKQRGFKSSSLNSIAKLTPQSQAEAPASVKQPVKPKTRLLTP EISSRFSDLQAPPR+LAPEDVG AAS NRL TGP A AAAKR KDHS+AQPVVL LGPNS EEWTSRSTLPIRGNEE+ NTS+SSYRSEEAATAEGGQ +DHRERV AG+ D DDQTD EEVDL+VSDGEAFFVLEDMFGGLLPPETL+NLFAESGKYLE+AVKEGFKVCEGLWGQGE ITFP+SPSSDG+TTDDF+TPSTSAGTDVSTNENGSESWDDETHGEFADVSHWTHKQVDTLTELCLAFEATISRETIIAALTASNHDATSAAQLLL PGPANPRERGEG RSRRY GVAQRERKARPPR D LPTATLLGATCGVDHRAGALGER WEEE
Sbjct: 11 SLVNQDTLGSREKCRRRAQQVLEKGGRVLIDRCNFDQSQRVTWLDLAVSLSLHKDACIAVWLDIPI-----------------------------------------------------------------GSDGAPGTERAPAPPATAAGSDRVGGDFGGGTGWRRGVDSVEMFRDQSLAEEGSQWNIDSCPPGGVGAVATAPAVHHAVDTFFPVEKSATAAGMAAKLPGAAPGQWGVTYHTPAAADAPMTRPADDFGPVLAWGEDQRAAEDTAIPXXXXXXXXXXXXQQQVGGGGAAGPVARTRDAVGNNGWTAAHDATSYPSLPSAMNGNKSGRFVGSLQKQLPRRPKQRGFKSSSLNSIAKLTPQSQAEAPASVKQPVKPKTRLLTPTEISSRFSDLQAPPRVLAPEDVGVAASAGINRLETGPAATAAAKRGKDHSFAQPVVLALGPNSFEEWTSRSTLPIRGNEENRNTSNSSYRSEEAATAEGGQTFDHRERVKAGAGDDDDQTDGEEVDLDVSDGEAFFVLEDMFGGLLPPETLENLFAESGKYLEKAVKEGFKVCEGLWGQGEAITFPNSPSSDGSTTDDFLTPSTSAGTDVSTNENGSESWDDETHGEFADVSHWTHKQVDTLTELCLAFEATISRETIIAALTASNHDATSAAQLLLDPGPANPRERGEGRRSRRYGGVAQRERKARPPRYDGCLPTATLLGATCGVDHRAGALGERGWEEE 678
BLAST of mRNA_Ecto-sp13_S_contig74.18576.1 vs. uniprot
Match: A0A7S4VHJ8_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4VHJ8_9DINO) HSP 1 Score: 124 bits (310), Expect = 1.590e-25 Identity = 73/154 (47.40%), Postives = 93/154 (60.39%), Query Frame = 3
Query: 285 RILVLAGIPGSGKSTLASFLE-DMGWSVVNQDTLGSREKCRRRAQQVLEK-GGRVLIDRCNFDQSQRVTWLDLAVS---LSLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGLSSAGIVKRVARDFRPPHRKEGFHTVLRCHGDQDLSEAI 731
R+LVL G+PGSGKSTLA+ L ++GW VVNQD LGSR+ C + A+ L GGRV+IDRCN D SQR W+ LA+ L + C VWLD+P + C RV R GH TL SS +++ A + PP +EGF + R D SEA
Sbjct: 174 RMLVLCGLPGSGKSTLAARLRAELGWEVVNQDALGSRQACMKAARDHLRSPGGRVVIDRCNADVSQRAVWVQLALQEFGLGALEIGC--VWLDVPAEECDRRVLGRFGHRTLPPQASSLRVIRGFAASWEPPTAEEGFARLWRLASALD-SEAF 324
BLAST of mRNA_Ecto-sp13_S_contig74.18576.1 vs. uniprot
Match: A0A813GQ52_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GQ52_POLGL) HSP 1 Score: 120 bits (302), Expect = 1.120e-23 Identity = 65/137 (47.45%), Postives = 87/137 (63.50%), Query Frame = 3
Query: 285 RILVLAGIPGSGKSTLASFLEDMGWSVVNQDTLGSREKCRRRAQQVLEKG-GRVLIDRCNFDQSQRVTWLDLAVS---LSLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGLSSAGIVKRVARDFRPPHRKEGF 683
R+LVL G+PGSGKSTLAS + GW VVNQD+LGSR+ C + A++ L + GR+++DRCN D SQR W+ LA+ LS + C VWLD+ + C RV R GH TL +S ++K A ++PP EGF
Sbjct: 1310 RVLVLCGLPGSGKSTLASRFAEQGWEVVNQDSLGSRQACMKAARRALSRPQGRLVVDRCNADVSQRAIWIQLAMQDFGLSPAELGC--VWLDVQHEECGLRVLQRFGHSTLPPRQASLKVIKSFASSWQPPTSSEGF 1444
BLAST of mRNA_Ecto-sp13_S_contig74.18576.1 vs. uniprot
Match: A0A250WR76_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WR76_9CHLO) HSP 1 Score: 105 bits (263), Expect = 1.890e-22 Identity = 63/163 (38.65%), Postives = 90/163 (55.21%), Query Frame = 3
Query: 288 ILVLAGIPGSGKSTLASFLEDMG-WSVVNQDTLGSREKCRRRAQQVLEKGGRVLIDRCNFDQSQRVTWLDLAVSLSLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGLSSAGIVKRVARDFRPPHRKEGFHTVLRCHGDQDLSEAIALLS--LTAGSDGA 767
+++L GIPGSGK+T A L W +NQDTLG+R C A+ L +G V+IDRCNFD+SQR W+ LA ++ IAV L +P++VC RVQ R HPTL + + R++ + EGF+ VL +++ +TAG+ GA
Sbjct: 4 LVILVGIPGSGKTTFAQELSKRSAWDWINQDTLGNRYACEEAARVALSQGHNVIIDRCNFDESQRSVWVRLAQETCQNRVQIIAVQLLMPLEVCIARVQRRRSHPTLRPADGTR-VCGRMSNLLSIAYLGEGFNAVLTARRPEEVQRLYQHFEELVTAGAAGA 165
BLAST of mRNA_Ecto-sp13_S_contig74.18576.1 vs. uniprot
Match: A0A8J9SG03_9CHLO (Probable bifunctional polynucleotide phosphatase/kinase at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SG03_9CHLO) HSP 1 Score: 114 bits (286), Expect = 2.050e-22 Identity = 63/152 (41.45%), Postives = 86/152 (56.58%), Query Frame = 3
Query: 285 RILVLAGIPGSGKSTLASFLEDMGWSVVNQDTLGSREKCRRRAQQVLEKGGRVLIDRCNFDQSQRVTWLDLAVSLSLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGLSSAGIVKRVARDFRPPHRKEGFHTVLRCHGDQDLSEAIALL 740
R+++LAG+PGSGK+T+A L+++GW VNQDTLGSR C L G V++DRCNFD SQR +L+LA A+ L P+ C R + R HPTL G + GI+ R A +F HR EGF V +++ I L+
Sbjct: 20 RVIILAGLPGSGKTTVAKQLQNLGWVWVNQDTLGSRRACEEALVSALHAGREVVVDRCNFDVSQRSFFLNLACRCEAE---VTALQLTTPVKECIRRAKGRRDHPTLN-GDNIEGIITRFASEFVAVHRHEGFRDVHTAANAEEIDRFIRLM 167
BLAST of mRNA_Ecto-sp13_S_contig74.18576.1 vs. uniprot
Match: A0A2G4SWL6_RHIZD (P-loop containing nucleoside triphosphate hydrolase protein n=3 Tax=Rhizopus TaxID=4842 RepID=A0A2G4SWL6_RHIZD) HSP 1 Score: 105 bits (263), Expect = 2.360e-22 Identity = 59/141 (41.84%), Postives = 81/141 (57.45%), Query Frame = 3
Query: 285 RILVLAGIPGSGKSTLASFLEDM--GWSVVNQDTLGSREKCRRRAQQVLEKGGRVLIDRCNFDQSQRVTWLDLAVSLSLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGLSSAGIVKRVARDFRPPH--RKEGFHTVL 695
RIL+L G+PGSGKSTL+ L GW +NQD +GSR+ C A++ L K ++IDRCNFD+ QR TW+DL ++ D + + C R+Q R HPT G S I+K+ R++RPP + EG VL
Sbjct: 4 RILLLVGLPGSGKSTLSKELVKCKSGWERINQDDMGSRKACEMHAKRFLNKKLSIVIDRCNFDEKQRKTWVDLGQKYNVPVDCIVLTTTE---QECSERIQCREDHPTGVIGDSGVQILKKFMRNYRPPRIDQLEGIQRVL 141
BLAST of mRNA_Ecto-sp13_S_contig74.18576.1 vs. uniprot
Match: A0A137P251_CONC2 (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137P251_CONC2) HSP 1 Score: 103 bits (258), Expect = 1.080e-21 Identity = 58/154 (37.66%), Postives = 88/154 (57.14%), Query Frame = 3
Query: 288 ILVLAGIPGSGKSTLASFL--EDMGWSVVNQDTLGSREKCRRRAQQVLEKGGRVLIDRCNFDQSQRVTWLDLAVSLSLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGLSSAGIVKRVARDFRPPHRKEGFHTVLRCHGDQDLSEAIALLS 743
IL+L G PGSGK+ + + + VNQD LGSR C + ++ + +G V+IDRCNF++SQR W+DLA L+++ + ++LDIPI+V + R+ R GHPT G ++++ + FR P EGF V+ Q +E L S
Sbjct: 4 ILLLVGTPGSGKTHFSEYWCKSFPNYKRVNQDDLGSRVDCEIQTRKYISRGFDVIIDRCNFNKSQRKVWIDLARELNVYINC---IYLDIPIEVSKERILRRSGHPTQVQGYEGVEVLEKFSSQFRKPGHYEGFRNVIYLKHSQLETEHTLLNS 154
BLAST of mRNA_Ecto-sp13_S_contig74.18576.1 vs. uniprot
Match: A0A2J7ZVC4_9CHLO (Uncharacterized protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZVC4_9CHLO) HSP 1 Score: 112 bits (279), Expect = 1.260e-21 Identity = 61/148 (41.22%), Postives = 85/148 (57.43%), Query Frame = 3
Query: 288 ILVLAGIPGSGKSTLASFLEDMGWSVVNQDTLGSREKCRRRAQQVLEKGGRVLIDRCNFDQSQRVTWLDLA-VSLSLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGLSSAGIVKRVARDFRPPHRKEGFHTVLRCHGDQDLSEA 728
+LVL G+PGSGKS L+ LE GW+ +NQD LGSR C L+ V++DRCNFD +QR W+ LA + S +A+ L +P+ +C+ R ++R HPTLG ++ R A DF P ++EGFH VL Q+ A
Sbjct: 5 VLVLVGVPGSGKSFLSRRLEMRGWARINQDELGSRRACEDAYCSALQLRRHVVVDRCNFDVTQRSHWVRLAHAARSPSGVVLVALQLLVPLPLCKERARARTDHPTLGPHNCDE-VIGRFASDFVPASQREGFHRVLTARSSQEAEAA 151
BLAST of mRNA_Ecto-sp13_S_contig74.18576.1 vs. uniprot
Match: A0A1Y1XUD0_9FUNG (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XUD0_9FUNG) HSP 1 Score: 104 bits (259), Expect = 1.420e-20 Identity = 55/139 (39.57%), Postives = 76/139 (54.68%), Query Frame = 3
Query: 285 RILVLAGIPGSGKSTLASFL--EDMGWSVVNQDTLGSREKCRRRAQQVLEKGGRVLIDRCNFDQSQRVTWLDLAVSLSLHKDACIAVWLDIPIDVCQGRVQSRVGHPTLGAGLSSAGIVKRVARDFRPPHRKEGFHTVL 695
R+L+L G PGSGKST A L D W VNQD +G R C R ++ L++G +IDRCNFD+ QR TW+ +A L + ++ P C+ RVQ+R HPT G +++R R P +EGF+ L
Sbjct: 22 RVLILVGAPGSGKSTFAKSLCSYDKSWRRVNQDDMGDRSTCERYTRRWLKEGRNAVIDRCNFDEKQRKTWIRIAFEFDLLPEV---IFFTTPFQECENRVQAREEHPTGVVGEEGLEVLRRFQRMLTRPTLEEGFYKAL 157 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig74.18576.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig74.18576.1 >prot_Ecto-sp13_S_contig74.18576.1 ID=prot_Ecto-sp13_S_contig74.18576.1|Name=mRNA_Ecto-sp13_S_contig74.18576.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=807bp MWQSDGRAPRGHSKGQGKQRGRAPRPPPAPPPGGYRILVLAGIPGSGKSTback to top mRNA from alignment at Ecto-sp13_S_contig74:11398..20427- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig74.18576.1 ID=mRNA_Ecto-sp13_S_contig74.18576.1|Name=mRNA_Ecto-sp13_S_contig74.18576.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9030bp|location=Sequence derived from alignment at Ecto-sp13_S_contig74:11398..20427- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig74:11398..20427- >mRNA_Ecto-sp13_S_contig74.18576.1 ID=mRNA_Ecto-sp13_S_contig74.18576.1|Name=mRNA_Ecto-sp13_S_contig74.18576.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2421bp|location=Sequence derived from alignment at Ecto-sp13_S_contig74:11398..20427- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |