mRNA_Ecto-sp13_S_contig736.18531.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig736.18531.1 vs. uniprot
Match: D7FTI7_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI7_ECTSI) HSP 1 Score: 134 bits (337), Expect = 2.960e-39 Identity = 75/111 (67.57%), Postives = 75/111 (67.57%), Query Frame = 1
Query: 1 MARRAVSVEIFAAGDGINYPQK------------------------------------VVPGLDDGVSQLSIGERAKVTIPAASAYGARGFPGLVPPHSALVFDLELITFN 225
MARRAVSVEIFAAGDGINYPQK VVPGLDDGVSQLSIGERAKVTIPAASAYGARGFPGLVPPHSALVFDLELITFN
Sbjct: 1 MARRAVSVEIFAAGDGINYPQKGQTVTVHYTGYLEDGTQFDSSRNRGKPFKFKLGSEQVVPGLDDGVSQLSIGERAKVTIPAASAYGARGFPGLVPPHSALVFDLELITFN 111
BLAST of mRNA_Ecto-sp13_S_contig736.18531.1 vs. uniprot
Match: A0A7S2C1G0_9STRA (Peptidylprolyl isomerase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C1G0_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.360e-28 Identity = 61/111 (54.95%), Postives = 66/111 (59.46%), Query Frame = 1
Query: 1 MARRAVSVEIFAAGDGINYPQK------------------------------------VVPGLDDGVSQLSIGERAKVTIPAASAYGARGFPGLVPPHSALVFDLELITFN 225
M R V+VEIFAAGDGINYP+K V+ GLD GVSQLSIGERAK++IPAA AYG RGFPGLVPP S LVFDLELITFN
Sbjct: 1 MPRHDVAVEIFAAGDGINYPRKGQTVTVHYTGYLPDGDTFDSSRDRGKPFKFKLGAEQVILGLDQGVSQLSIGERAKISIPAALAYGERGFPGLVPPDSELVFDLELITFN 111
BLAST of mRNA_Ecto-sp13_S_contig736.18531.1 vs. uniprot
Match: A0A6U1QP22_9STRA (Peptidylprolyl isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QP22_9STRA) HSP 1 Score: 102 bits (253), Expect = 1.950e-26 Identity = 56/106 (52.83%), Postives = 62/106 (58.49%), Query Frame = 1
Query: 16 VSVEIFAAGDGINYPQ------------------------------------KVVPGLDDGVSQLSIGERAKVTIPAASAYGARGFPGLVPPHSALVFDLELITFN 225
V VEIFAAGDGINYPQ +V+ GLD+GVSQLSIGERAK+TIP+ YG RGFPGLVPP+S LVFDLELITF
Sbjct: 8 VKVEIFAAGDGINYPQPGKTVTVHYTGFLPDGTQFDSSRDRGKPFKFKLGAEQVISGLDEGVSQLSIGERAKITIPSQKGYGERGFPGLVPPNSQLVFDLELITFT 113
BLAST of mRNA_Ecto-sp13_S_contig736.18531.1 vs. uniprot
Match: F0YHE6_AURAN (Peptidylprolyl isomerase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHE6_AURAN) HSP 1 Score: 101 bits (252), Expect = 2.690e-26 Identity = 54/109 (49.54%), Postives = 65/109 (59.63%), Query Frame = 1
Query: 7 RRAVSVEIFAAGDGINYPQK------------------------------------VVPGLDDGVSQLSIGERAKVTIPAASAYGARGFPGLVPPHSALVFDLELITFN 225
++ ++VEIFAAGDG+NYP+K V+PGLD GVSQLSIGERAK+ IP AYG RGFPGL+P +SAL+FDLELITFN
Sbjct: 4 KKDIAVEIFAAGDGVNYPRKGQTVTVHYSGYLPSGDMFDSSRDRGKPFKFKLGGEQVIPGLDAGVSQLSIGERAKIVIPPDMAYGDRGFPGLIPRNSALIFDLELITFN 112
BLAST of mRNA_Ecto-sp13_S_contig736.18531.1 vs. uniprot
Match: A0A8J2T2V8_9STRA (Peptidylprolyl isomerase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T2V8_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 1.590e-25 Identity = 53/106 (50.00%), Postives = 65/106 (61.32%), Query Frame = 1
Query: 16 VSVEIFAAGDGINYP------------------------------------QKVVPGLDDGVSQLSIGERAKVTIPAASAYGARGFPGLVPPHSALVFDLELITFN 225
++VEIFAAGDG+NYP ++V+PGLD GVSQLSIGERAK++IP+ AYG RGFPGL+P +SALVFDLELITF+
Sbjct: 8 IAVEIFAAGDGVNYPRQGQTVTVHYSGYLPNGEIFDSSRDRGKPFKFKLGGEQVIPGLDAGVSQLSIGERAKISIPSDMAYGERGFPGLIPRNSALVFDLELITFS 113
BLAST of mRNA_Ecto-sp13_S_contig736.18531.1 vs. uniprot
Match: A0A836CL56_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL56_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 2.160e-22 Identity = 40/55 (72.73%), Postives = 51/55 (92.73%), Query Frame = 1
Query: 61 QKVVPGLDDGVSQLSIGERAKVTIPAASAYGARGFPGLVPPHSALVFDLELITFN 225
++VVPGLD+G +QLSIGERAK+T+P + AYGA+GFPGLVPP+S LVFD+ELITF+
Sbjct: 54 EQVVPGLDEGAAQLSIGERAKITMPPSMAYGAKGFPGLVPPNSTLVFDMELITFS 108
BLAST of mRNA_Ecto-sp13_S_contig736.18531.1 vs. uniprot
Match: A0A485LR83_9STRA (Peptidylprolyl isomerase n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LR83_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 7.100e-22 Identity = 47/106 (44.34%), Postives = 59/106 (55.66%), Query Frame = 1
Query: 16 VSVEIFAAGDGINYPQK------------------------------------VVPGLDDGVSQLSIGERAKVTIPAASAYGARGFPGLVPPHSALVFDLELITFN 225
V VE+F AGDG+NYP+K V+PGLD+G+ QL + ERAK+ IPA AYG +GFPGLVPP++ LVFD+ELITF
Sbjct: 21 VQVEVFVAGDGVNYPKKGQTVVVHYTAYLQDGKKFDSSRDRDKPFKFKLGAEQVIPGLDEGIEQLCMKERAKIYIPADKAYGKKGFPGLVPPNTNLVFDIELITFK 126
BLAST of mRNA_Ecto-sp13_S_contig736.18531.1 vs. uniprot
Match: K3WSB6_GLOUD (Peptidylprolyl isomerase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSB6_GLOUD) HSP 1 Score: 90.1 bits (222), Expect = 1.250e-21 Identity = 47/106 (44.34%), Postives = 59/106 (55.66%), Query Frame = 1
Query: 16 VSVEIFAAGDGINYPQK------------------------------------VVPGLDDGVSQLSIGERAKVTIPAASAYGARGFPGLVPPHSALVFDLELITFN 225
+ VE+F AGDGINYP+K V+PGLD+GV +L + ERAK+ IPA AYG +GFPGLVPP+S L+FDLEL+TF
Sbjct: 16 IQVEVFIAGDGINYPKKGQTVVVHYTGYLQDGRKFDSSRDREKPFKFKLGAEQVIPGLDEGVERLCMKERAKIFIPADKAYGRKGFPGLVPPNSNLIFDLELLTFR 121
BLAST of mRNA_Ecto-sp13_S_contig736.18531.1 vs. uniprot
Match: A0A024TRW9_9STRA (Peptidylprolyl isomerase n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TRW9_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 2.030e-21 Identity = 46/106 (43.40%), Postives = 59/106 (55.66%), Query Frame = 1
Query: 16 VSVEIFAAGDGINYPQK------------------------------------VVPGLDDGVSQLSIGERAKVTIPAASAYGARGFPGLVPPHSALVFDLELITFN 225
+ VE+F AGDGINYPQK V+PGLD+G+ +L + ERAK+ IP+ AYG +GFPGLVPP++ LVFD+ELITF
Sbjct: 21 IQVEVFVAGDGINYPQKGQTVVVHYTAYLQDGKKFDSSRDRDKPFKFKLGAEQVIPGLDEGIERLCMKERAKIYIPSDKAYGKKGFPGLVPPNTNLVFDIELITFK 126
BLAST of mRNA_Ecto-sp13_S_contig736.18531.1 vs. uniprot
Match: A0A7S1CR57_9STRA (Peptidylprolyl isomerase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CR57_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 3.860e-21 Identity = 47/112 (41.96%), Postives = 63/112 (56.25%), Query Frame = 1
Query: 1 MARRAVSVEIFAAGDGINYP-------------------------------------QKVVPGLDDGVSQLSIGERAKVTIPAASAYGARGFPGLVPPHSALVFDLELITFN 225
M++ V+VEIF AGDG+NYP ++V+ GLD+GV+QLSIGE A++ IP+ AYGA GFPGLVPP+ L FD+ELI+F+
Sbjct: 13 MSKGRVTVEIFKAGDGVNYPKPGNVVTLHYTGYYGRAQTEFDSTRTRGKPFKFKLGAEQVIEGLDEGVAQLSIGEHAQIHIPSEKAYGAHGFPGLVPPNKDLTFDVELISFS 124 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig736.18531.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig736.18531.1 >prot_Ecto-sp13_S_contig736.18531.1 ID=prot_Ecto-sp13_S_contig736.18531.1|Name=mRNA_Ecto-sp13_S_contig736.18531.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=76bp MARRAVSVEIFAAGDGINYPQKVVPGLDDGVSQLSIGERAKVTIPAASAYback to top mRNA from alignment at Ecto-sp13_S_contig736:15881..17559+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig736.18531.1 ID=mRNA_Ecto-sp13_S_contig736.18531.1|Name=mRNA_Ecto-sp13_S_contig736.18531.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1679bp|location=Sequence derived from alignment at Ecto-sp13_S_contig736:15881..17559+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig736:15881..17559+ >mRNA_Ecto-sp13_S_contig736.18531.1 ID=mRNA_Ecto-sp13_S_contig736.18531.1|Name=mRNA_Ecto-sp13_S_contig736.18531.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=228bp|location=Sequence derived from alignment at Ecto-sp13_S_contig736:15881..17559+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |