mRNA_Ecto-sp13_S_contig736.18530.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig736.18530.1 vs. uniprot
Match: D7FTI8_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI8_ECTSI) HSP 1 Score: 567 bits (1462), Expect = 4.780e-190 Identity = 346/597 (57.96%), Postives = 352/597 (58.96%), Query Frame = 3
Query: 483 MEDVRLGEILQGRLEGQLEAERDVWEIRKKRFKGDVAGAKERAKTAELTLATISGLFKIEQQENVQNLKAEIERRQAEVRSRVAFLQLVPSPLQRPPHSDLHVNPEEELDGSQGVEELLLASPAAITDTMTAATGAGSTFALDGVEASSIAAAAGANSCGDSPENGLEKFGSCSEWDEEIDEHXXXXXXXXXXXXXXXXXXXXXXXXREXVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQQYKRDLKLMFLRNVAKTSRELSVSVPAMHLARWCSLRPSSRALRRGQVLNEGAFGAVTVVQHEAHGPFALKEVSSDAAKEVGWAAMQEVHILIDLMGHDNIIGLKSFDLTIRSMPILMELATCDAFDVLEGGYFYSVLQKAKIMRDGACGLIHMHSFDLVHVDFKPENLLVVTTGRERRGKVTDFGLSRSRGTMRPSMTGTAAYMPPKNLTTDMPADFDQDAFSAAVVTLLMLLKPTIQANNIFALNSLLTEEEAERAMLIDRRDEAAEVAFQSEVMKRTLADGSFERNVLVPNNLHDAVPSPEQVCQWLKDGLSVDPSKPPSTKDLFDNLNDLIEQLTGN 2273
MEDVRLGEILQGRL GQLEAER V EIRKKR KGDVA AKERAKTAELTLATISGL KIEQ ENV NLKAE ERRQAEV LNEGAFG VTVV+HEAHG FALKEVS DAAKEVGWAAMQEVHILIDLMGHDNIIGLK FDLTIRSMPILMELATCDAFDVLEGGYFYSVLQKA+IMRDG CGLIH+HSFDLVHVDFKPENLLVV TGRERRGKVTDFGLSRSRGTMRPSMTGTA YMPPKNLT DMPADFDQDAFSAAVVTLLMLLKPTIQANNIFALNSLLTEEEAERAMLIDRRDEAAEVAFQ+EVMKRTLADGSFERNVLVP NLH AVPSPE+VCQWLKDGLSVDPS PPSTKDLFDNLNDLIE+LTGN
Sbjct: 1 MEDVRLGEILQGRLGGQLEAERGVREIRKKRLKGDVAAAKERAKTAELTLATISGLLKIEQ-ENVNNLKAENERRQAEV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LNEGAFGTVTVVEHEAHGSFALKEVSPDAAKEVGWAAMQEVHILIDLMGHDNIIGLKGFDLTIRSMPILMELATCDAFDVLEGGYFYSVLQKARIMRDGVCGLIHIHSFDLVHVDFKPENLLVVKTGRERRGKVTDFGLSRSRGTMRPSMTGTATYMPPKNLTADMPADFDQDAFSAAVVTLLMLLKPTIQANNIFALNSLLTEEEAERAMLIDRRDEAAEVAFQTEVMKRTLADGSFERNVLVPKNLHHAVPSPEKVCQWLKDGLSVDPSNPPSTKDLFDNLNDLIERLTGN 371
BLAST of mRNA_Ecto-sp13_S_contig736.18530.1 vs. uniprot
Match: D7FYY1_ECTSI (Protein serine/threonine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYY1_ECTSI) HSP 1 Score: 105 bits (263), Expect = 1.780e-19 Identity = 92/314 (29.30%), Postives = 146/314 (46.50%), Query Frame = 3
Query: 1365 SSRALRRGQVLNEGAFGAVTVVQHE-AHGPFALKEVSSDAAKEVGWAAMQEVHILIDLMG--HDNIIGLKSFD--LTIRSMPILMELATCDAFDVLEGGYFYSVLQKAKIMRDGACGLIHMHSFDLVHVDFKPENLLVVTTGR-ERRGKVTDFGLSRSRGTMRPSMTGTAAYMPPKNLTTDMPADFDQDAFSAAVVTLLMLLKPTIQANNIFALNSLLTEEEAERAMLIDRRDE-----AAEVAFQSEVMKRTLADGSFERNVLVPNNLHDAVPSPE---QVCQWLKDGLSVDPSKPPSTKDLFDNLNDLIEQL 2264
+S +L V+ EG+FG V H G FA+K++ A + A E+ ++ L H N+IG + D MPIL+ A D VL G +S+ QK ++ A G+ HMH + H D P N+L+V G E K++DFGL+R+ G MRP M GT MP + + + QD F+ V+ + + P N+F L T EA+ ++ + A F+ +M+RT++ +FE ++L +NLH + S V +L L+ D + + D+IE +
Sbjct: 397 ASSSLHESGVIGEGSFGIVEGATHSFLPGEFAVKKLKEGADNNARYCARVEMIVMARLAKSPHPNVIGAIAIDDREAAVGMPILLPRAHGDFGQVLNDGD-WSMTQKLSCLQQVASGVRHMHEAGIGHGDLTPPNILLVDDGDGECVPKISDFGLARALGEMRPKMMGTLGSMPLEVMQAPVRTSESQDTFAMGVMAFTVCVTPDKVQANMFISPDLFTVAEAKAKKALEAKGTGPFAMAERDLFERNMMERTMSTRAFE-SLLTVDNLHPDLGSARVRGMVSCYLSAFLATDLNDRGDMASFEKVMGDMIEMV 708
BLAST of mRNA_Ecto-sp13_S_contig736.18530.1 vs. uniprot
Match: A0A6H5JF73_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF73_9PHAE) HSP 1 Score: 85.5 bits (210), Expect = 5.240e-13 Identity = 67/208 (32.21%), Postives = 102/208 (49.04%), Query Frame = 3
Query: 1542 HDNIIGLKSFD--LTIRSMPILMELATCDAFDVLEGGYFYSVLQKAKIMRDGACGLIHMHSFDLVHVDFKPENLLVVTTGR-ERRGKVTDFGLSRSRGTMRPSMTGTAAYMPPKNLTTDMPADFDQDAFSAAVVTLLMLLKPTIQANNIFALNSLLTEEEAERAMLIDRRDE-----AAEVAFQSEVMKRTLADGSFERNVLVPNNLH 2141
H N+IG + D MPIL+ A D VL G +S+ QK ++ G+ HMH + H D N+L+V G E K++DFGL+R+ G MRP M GT MP + + + QDAF+ V+ + + P N+F L T EA+ ++ + A F+ +VM+RT++ +FE +L +NLH
Sbjct: 900 HPNVIGAIAIDDREAAVGMPILLPRAHGDFGQVLNDGD-WSMTQKLSCLQQVTSGVRHMHQAGIGHGDLTSPNILLVDDGDGECVPKISDFGLARALGEMRPKMMGTLGSMPLEVMQASVRTSESQDAFAMGVMAFTVCVTPEKVQANMFISPYLFTAAEAKAKKALEAKGTGPFAMAERDLFERKVMERTMSTRAFEA-LLTVDNLH 1105
BLAST of mRNA_Ecto-sp13_S_contig736.18530.1 vs. uniprot
Match: A0A7S4R3M4_9STRA (cGMP-dependent protein kinase n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R3M4_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 4.860e-10 Identity = 56/171 (32.75%), Postives = 88/171 (51.46%), Query Frame = 3
Query: 1395 LNEGAFGAVTVVQHEAHGP-FALKEVSSDAAKEVGWAAMQEVHILIDLM---GHDNIIGLKSFDLTIRSMPILMELATC-DAFDVLEGGYFYSVLQKAKIMRDGACGLIHMHSFDLVHVDFKPENLLVVTTGRERRG-KVTDFGLSRSRGTMRPS---MTGTAAYMPPKNL 1880
L EGA+GAV + + G A+K++S + + ++E+ L+ + GH NI GL+ +R ++++L T + FD L G YS A+++R+ A L +H +VHVD KPENL++ + R+ K+ DFG S R GT AY PP+ L
Sbjct: 83 LGEGAYGAVFLAHNRKTGQDMAMKKISKFYTDDDTF--LREIDALLHIQKSGGHPNICGLQKAYSEVRDFVLVLDLVTGGEMFDHLIEGGAYSEADAARLVREVASALSFIHGIGIVHVDLKPENLMLSSKSRDDAVIKLVDFGCSEVISPERDEDALTAGTIAYSPPEAL 251
BLAST of mRNA_Ecto-sp13_S_contig736.18530.1 vs. uniprot
Match: A0A8B7DGY9_HYDVU (serine/threonine-protein kinase 33-like n=2 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B7DGY9_HYDVU) HSP 1 Score: 71.6 bits (174), Expect = 3.090e-9 Identity = 73/281 (25.98%), Postives = 129/281 (45.91%), Query Frame = 3
Query: 1392 VLNEGAFGAVT-VVQHEAHGPFALKEVSSDAAKEVGWAAMQEVHILIDLMGHDNIIGLKSFDLTIRSMPILMELATCDAFD-VLEGGYFYSVLQKAKIMRDGACGLIHMHSFDLVHVDFKPENLLVVTTGRERRGKVTDFGLSRSRGT-----MRPSMTGTAAYMPPKNLTTDMPADFDQ--DAFSAAVVTLLMLL-KPTIQANNIFALNSLLTEEEAERAMLIDRRDEAAEVAFQSEVMKRTLADGSFERNVLVPNNLHDAVPSPEQVCQ-WLKDGLSVD 2201
+L +G+FG V+ ++ +A+K ++ + A VG ++ +++ ++ H +II L+ T M ++MEL A + +L+ ++ I A + ++HS D++H D K EN+L+ K+TDFGLS +RG M + GT YM P+ +T D+ Q D +SA V+ +L +P A+N E E +LI + E+ F+ E K ++ + + S E +C W+K +VD
Sbjct: 36 LLGKGSFGTVSEAIRLYDQTGWAIKVINKEKAGSVGVKLLEREVLIMKMVNHPHIIHLEEVFETSHKMFLVMELCLQGALESLLKKVTYFEEKDVLCIFTQLADAIDYIHSNDIIHRDLKLENILLAPQFESYNIKLTDFGLSYTRGGSGSDYMMNQVVGTPIYMAPEVITR---YDYSQQCDIWSAGVIMYKLLCGEPPFMASN-----------EEELFILIQK----GELKFEKEKWKSVSPSAKHLLEGMLKVDPAHRITSKEILCHPWIKGDETVD 298
BLAST of mRNA_Ecto-sp13_S_contig736.18530.1 vs. uniprot
Match: A0A498DNG7_9PROT (Non-specific serine/threonine protein kinase (Fragment) n=1 Tax=Mariprofundus sp. EBB-1 TaxID=2650971 RepID=A0A498DNG7_9PROT) HSP 1 Score: 70.1 bits (170), Expect = 5.250e-9 Identity = 58/200 (29.00%), Postives = 96/200 (48.00%), Query Frame = 3
Query: 1395 LNEGAFGAV-TVVQHEAHGPFALKEVSSDAAKEVGWAAMQEVHILIDLMGHDNIIGLKSFDLTIRSMPILMELATCDAFDVLEGGYFYSVLQKAKIMRDGAC---------GLIHMHSFDLVHVDFKPENLLVVTTGRERRGKVTDFGLSR--SRGTMRPSMTGTAAYMPPKNLTTDMPADFDQ--DAFSAAVVTLLMLL 1952
L G+FG V ++ + A+KE++ D KE A + E+ ++ L H N++ K+ + ++ ++ME L GG S++ + K + G GL ++HSFD+VH D KP+N+L+ G K+ DFG+SR S+ S GT YM P+ D +D D ++A + ML+
Sbjct: 19 LGHGSFGIVYKALEQFSKKHVAIKEITDDDYKE---ALLSEIELMAGLH-HANVVQYKTTEKLKENLYLVMEY--------LPGGSLVSLIGEGKKISSGLAKQHLIDILEGLKYLHSFDVVHRDLKPDNVLLAADGHV---KIADFGVSRAISKSRKASSRAGTIKYMAPEMFEADEEHGYDHRVDLYAAGCLYFEMLV 203
BLAST of mRNA_Ecto-sp13_S_contig736.18530.1 vs. uniprot
Match: D7FYH0_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYH0_ECTSI) HSP 1 Score: 64.7 bits (156), Expect = 8.970e-8 Identity = 46/150 (30.67%), Postives = 74/150 (49.33%), Query Frame = 3
Query: 1710 MHSFDLVHVDFKPENLLVVTTGRERR-GKVTDFGLSRSRGTMRPSMTGTAAYMPPKNLTTDMPADFDQDAFSAAVVTLLMLLKPTIQANNIFALNSLLTEEEAERAMLIDRRDEAAEVA-----FQSEVMKRTLADGSFERNVLVPNNLH 2141
MH + H D P N+L+V G +V+DFGL+R+ G MRP M GT MP + + +PA QD F+ + ++ + P N+F L T EA+ ++ + F+ VM+RT++ G+F ++ +NLH
Sbjct: 1 MHKAGIGHWDLTPPNILLVDDGYGGCIPQVSDFGLARALGEMRPKMMGTLGSMPLEVMQASVPACPSQDTFAMGAMAFIICVTPDKVQANMFISPHLFTAAEAKAKKALEAKGGGPLAMTLRDIFERNVMERTMSTGAFT-TLMTVDNLH 149
BLAST of mRNA_Ecto-sp13_S_contig736.18530.1 vs. uniprot
Match: A0A8C5PC34_9ANUR (Protein kinase domain-containing protein n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5PC34_9ANUR) HSP 1 Score: 65.5 bits (158), Expect = 1.630e-7 Identity = 61/192 (31.77%), Postives = 97/192 (50.52%), Query Frame = 3
Query: 1395 LNEGAFGAVTVVQHEAHG-PFALKEVSSDAAKEVGWAAMQEVHILIDLMGHDNIIGLKSFDLTIRSMP---ILMELATC-DAFDVLEGGYFYSVLQKAKIM--RDGACGLIHMHSFDLVHVDFKPENLLVVTTGRERRG-KVTDFGLSRSRGTMRPSMTGTAAYMPPKNLTTD----MPADFDQDAFSAAVV 1934
L +G +G VT+V H G P ALK + ++ K+ + + E + + L GH NIIG+ F + S L E A D +++ +L+ A + + L +H LV+ D KPEN+L+ GR+ + K+TDFGL+R RGT+ ++G Y P+ T +P DF DA++ V+
Sbjct: 39 LGKGKYGHVTLVMHRQRGTPMALKLLPKESTKQQNF--LYEYCVALVLSGHPNIIGM--FGIAFESEEHYGFLYEAALQRDLISIIKPRE--GILEPAAKLCTKQLVNALEFIHHKGLVYRDVKPENILIF--GRDCQNIKLTDFGLTRPRGTVLKLVSGIIPYTAPELSNTQNCEGVPIDFTLDAWALGVL 222
BLAST of mRNA_Ecto-sp13_S_contig736.18530.1 vs. uniprot
Match: H2ZY14_LATCH (Protein kinase domain-containing protein n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=H2ZY14_LATCH) HSP 1 Score: 65.9 bits (159), Expect = 1.900e-7 Identity = 51/163 (31.29%), Postives = 81/163 (49.69%), Query Frame = 3
Query: 1395 LNEGAFGAVTVVQHEAHG-PFALKEVSSDAAKEVGWAAMQEVHILIDLMGHDNIIGLKSFDL-TIRSMPILMELATC-DAFDVLEGGYFYSVLQKAKIMRDGACGLIHMHSFDLVHVDFKPENLLVVTTGRERRGKVTDFGLSRSRGTMRPSMTGTAAYMPPK 1874
L +G++G V +V H A G P ALK + + K + + E I + + H ++G+ T E+A+ D F ++E G + + + L +H+ LVH D KPEN+L+ RR K+TDFGL+R +GT+ M+GT Y P+
Sbjct: 39 LGQGSYGHVLLVIHRARGTPIALKLLRKKSTKLRNF--LLEYCISLSVSSHPCMVGMFGIVFETKHHYGFAQEVASFGDLFSIIEPGVGIPEISVKRCALQVSSALDFLHNKGLVHRDIKPENILLFDKDC-RRVKLTDFGLTRRKGTIVRPMSGTIPYTAPE 198
BLAST of mRNA_Ecto-sp13_S_contig736.18530.1 vs. uniprot
Match: K3WH13_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WH13_GLOUD) HSP 1 Score: 67.0 bits (162), Expect = 1.990e-7 Identity = 58/200 (29.00%), Postives = 97/200 (48.50%), Query Frame = 3
Query: 1386 GQVLNEGAFGAVTVVQHEAHGP-FALKEVSSDAAKEVGWAAMQEVHILIDLMG---HDNIIGLKSFDLTIRSMPILMELATC-DAFDVLEGGYFYSVLQKAKIMRDGACGLIHMHSFDLVHVDFKPENLLVVTTGRERRGKVTDFGLSRS-RGTMRP-----SMTGTAAYMPPKNLTTDMPADFDQDAFSAAVVTLLMLL 1952
G VL G G V + +G FA+K V K A + EV I+ ++ H N++ + + I+MEL T + +D + YS A IM+ L +H ++++H+D KPEN+L+ + ++ + +TDFGL+R G P SM GT Y+ P+ +++ D FSA V+ ++L+
Sbjct: 251 GDVLGVGGNGVVNQIVDTRNGKQFAVKSVDVSKFKNRE-AVVSEVEIMRNITNNIKHPNLVKIYKVYEEQDKIYIIMELCTGGELYDSIVKRGCYSEADAADIMKQLLSALQALHKYNILHLDIKPENILLSSKEKDAKIVLTDFGLARMVNGKKNPLQGGTSMAGTVGYIAPEVISSHN-YTAAADVFSAGVILFILLV 448 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig736.18530.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig736.18530.1 >prot_Ecto-sp13_S_contig736.18530.1 ID=prot_Ecto-sp13_S_contig736.18530.1|Name=mRNA_Ecto-sp13_S_contig736.18530.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=723bp MPAIEMLADPNYSMVITAGVAAVAFVSAATFVRSSQAAKKRKKEDEGKARback to top mRNA from alignment at Ecto-sp13_S_contig736:6174..15656- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig736.18530.1 ID=mRNA_Ecto-sp13_S_contig736.18530.1|Name=mRNA_Ecto-sp13_S_contig736.18530.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9483bp|location=Sequence derived from alignment at Ecto-sp13_S_contig736:6174..15656- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig736:6174..15656- >mRNA_Ecto-sp13_S_contig736.18530.1 ID=mRNA_Ecto-sp13_S_contig736.18530.1|Name=mRNA_Ecto-sp13_S_contig736.18530.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2169bp|location=Sequence derived from alignment at Ecto-sp13_S_contig736:6174..15656- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |