mRNA_Ecto-sp13_S_contig735.18519.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig735.18519.1 vs. uniprot
Match: D7G6P6_ECTSI (tRNA (adenine(58)-N(1))-methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6P6_ECTSI) HSP 1 Score: 759 bits (1960), Expect = 3.200e-269 Identity = 447/606 (73.76%), Postives = 454/606 (74.92%), Query Frame = 1
Query: 58 MDFRAGRCSDGSRDPATICEASTAPLIRNGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIIGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGNTVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAARGEGGGFGEELDGKVDAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRSQGFHSVSTIEFRLRNINYAEVQLDVPDFGSNEEAAEAASTVSKLPASSAATEHDDSSRNSAVAGGRVHGEVDGSPTGAVTVEPNTDDGDSGFPPAVVEEKGADSVSAQEGAKVSSQKEASGVGENGVTAKGSHDNPSDAAAPSSEGMKPTEGDQAAVPDSKKRPREEGGGSGAATPGVDDGASRTGRGRNERLQPKAAIRAAEALAEKVGGARKPPHKLVCAQPFPLMRGHTAFLTFATAPVSRQLGTATTAKATPAAAG-----ATSDGVEGGSEDGHKASIIGDAESTLNRSEGDASGXXXXXXXXXXGDMMDVCEEGIDGKXXXXXXXXXVDKTDDSPGPSASDV-QETLDSSSPAGR 1857
MDFRAGRCSDGSRDPATICEASTAPLIRNGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIIGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPG+TVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAARG+GGGFGEELDGK DAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRS+GFHSVSTIEFRLRNINYAEV EG+KP EGDQAA+P SKKR REEGGGSGAATPGVDDGASRTGRGRNERLQPKAAIRAAEA AEKVGGARKPP KLVCAQPFPLMRGHTAFLTFATAPVSRQLGTA TA+AT ATSDGV+G SEDGHKA I GDAE LNRSEGDASGXXXXXXXXX GD MDVCEEGIDGKXXXXXXXXX DKTDDSPG SASDV ET DSSSPAGR
Sbjct: 1 MDFRAGRCSDGSRDPATICEASTAPLIRNGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIIGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGDTVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAARGDGGGFGEELDGKADAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRSEGFHSVSTIEFRLRNINYAEV---------------------------------------------------------------------------------------------------------------------------EGIKPMEGDQAALPGSKKRSREEGGGSGAATPGVDDGASRTGRGRNERLQPKAAIRAAEAAAEKVGGARKPPLKLVCAQPFPLMRGHTAFLTFATAPVSRQLGTAATAEATXXXXXXXXXXATSDGVDG-SEDGHKAGIAGDAEIALNRSEGDASGXXXXXXXXX-GDRMDVCEEGIDGKXXXXXXXXXADKTDDSPGASASDVVPETPDSSSPAGR 481
BLAST of mRNA_Ecto-sp13_S_contig735.18519.1 vs. uniprot
Match: A0A835ZH22_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH22_9STRA) HSP 1 Score: 305 bits (781), Expect = 3.770e-93 Identity = 143/212 (67.45%), Postives = 171/212 (80.66%), Query Frame = 1
Query: 250 IIGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGNTVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAARGEGGGFGEELDGKVDAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRSQGFHSVSTIEFRLRNINYAEVQLDVPDFGSN 885
+IG+P+GS+VFSR+TKG++Y LSPTPELWS VVPNRTQIVQ DQS VIFRLD+KPG+TV+ESGTGSG MSTAIMR IAP+G LH+FEFNE RA RA+ EF +N L LV HRDVC GEGG FG++L+GK DA+FLDLPEPWLAV HA LKP KK+CSYSPC+EQV +TC LR GFHS++T+E R+R E LD+PD+GS+
Sbjct: 1 MIGQPYGSKVFSRSTKGFIYVLSPTPELWSTVVPNRTQIVQPSDQSFVIFRLDMKPGDTVIESGTGSGAMSTAIMRAIAPTGHLHTFEFNEARADRARAEFVKNGLASLVTVKHRDVCGREGEGG-FGDQLNGKADAIFLDLPEPWLAVPHAHAALKPNKKVCSYSPCVEQVQRTCTVLREWGFHSLATVELRIRPYQLYEADLDLPDWGSS 211
BLAST of mRNA_Ecto-sp13_S_contig735.18519.1 vs. uniprot
Match: A0A7S3XKL8_HETAK (tRNA (adenine(58)-N(1))-methyltransferase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKL8_HETAK) HSP 1 Score: 263 bits (673), Expect = 5.870e-78 Identity = 127/213 (59.62%), Postives = 162/213 (76.06%), Query Frame = 1
Query: 250 IIGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGNTVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAARGEGGGFGEELDGKVDAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRSQGFHSVSTIEFRLRNINYAEVQLDVPDFGSNE 888
+IGK +GS+V SR + G+V+ L PTPELW+ + +RTQIVQ D ++V+ RL LKPG V+ESGTGSG MS AIMR IAP+G LH+FEFNE RA +A+EEF++N +G LV HRDVCA EGG FG+ L+GKVDAVFLDLP PWLA+ A LK G+ LCSYSPCIEQV+KTC+ LR GFHS++T+E RLR+ + V+ + PDFG ++
Sbjct: 1 MIGKTYGSQVQSRISTGWVFLLKPTPELWTLALDHRTQIVQGSDAALVVLRLHLKPGMVVIESGTGSGAMSYAIMRAIAPTGHLHTFEFNEHRAKQAEEEFKKNRVGHLVTVRHRDVCAEGAEGG-FGDHLNGKVDAVFLDLPAPWLALPRAHAALKAGETLCSYSPCIEQVIKTCDKLRELGFHSITTVENRLRSYDVRPVEFETPDFGDDD 212
BLAST of mRNA_Ecto-sp13_S_contig735.18519.1 vs. uniprot
Match: B7FTZ8_PHATC (tRNA (adenine(58)-N(1))-methyltransferase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FTZ8_PHATC) HSP 1 Score: 258 bits (660), Expect = 1.710e-77 Identity = 130/235 (55.32%), Postives = 162/235 (68.94%), Query Frame = 1
Query: 136 IRNGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIIGKPFGSRVFSRTTKGY--VYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGNTVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAARGEGGGFGEELDGKVDAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRSQGFHSVSTIEFRLR 834
IR GD+VV E + + F K I+ R+G FHH++ IGKPFG ++ SR+ +GY VY L PTPELW+ + +RTQIV + DQS VIF+L LKP TVVESGTGSG MS AI+RTIAP G LH++EFNE RA A+ EF N +G LV H+DVC RG+GG F + VD VFLDLPEPWLAV HA +KP +L SYSPC+EQ + E LR GFHS+ T+E+RL+
Sbjct: 1 IRTGDLVVIMESFDNLAFVYAKEGEIFSNRNGNFHHNDFIGKPFGCKIRSRSHRGYGFVYLLKPTPELWARSLNHRTQIVHELDQSQVIFQLHLKPNMTVVESGTGSGAMSHAILRTIAPHGKLHTYEFNEHRADTARHEFANNGVGHLVSVHHKDVCGIRGDGG-F-DLPPQSVDGVFLDLPEPWLAVPHAAFVMKPNARLASYSPCVEQTQRMVETLRQSGFHSIKTMEYRLQ 233
BLAST of mRNA_Ecto-sp13_S_contig735.18519.1 vs. uniprot
Match: A0A1V9Z9G2_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z9G2_9STRA) HSP 1 Score: 260 bits (664), Expect = 7.120e-77 Identity = 127/262 (48.47%), Postives = 167/262 (63.74%), Query Frame = 1
Query: 100 PATICEASTAPLIRNGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIIGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGNTVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAARGEGGGFGEELDGKVDAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRSQGFHSVSTIEFRLRNINYAEVQLDVPDFGSN 885
P+++ + P++ GD+V+ +E + + M+ ++Q RHGAFHH+++IG +G++V+SR +KGY+Y LSPTPELWS + +RTQIV D S ++F PG VVESGTGSG ++T+ R I PSG +++FEFN RA A+EEF N L + RD C GF E LDGKVD VFLDLP PW AV HAK LK G SYSPC+EQV KTC+ALR GF + TIE RL V + VPDFG+N
Sbjct: 19 PSSVSMWAGKPIVEVGDLVILYETHNSVTYAFMEKDAVYQNRHGAFHHNDMIGHRYGTKVYSRMSKGYIYILSPTPELWSKALRHRTQIVFTLDASAILFNTHCGPGKIVVESGTGSGALTTSFARAIQPSGHVYTFEFNATRAQVAKEEFAANGLNKVATVECRDACEQ-----GFPEHLDGKVDVVFLDLPCPWKAVGHAKRVLKTGGAFASYSPCMEQVQKTCDALRIDGFDRIRTIETRLMTYTARYVSMPVPDFGAN 275
BLAST of mRNA_Ecto-sp13_S_contig735.18519.1 vs. uniprot
Match: A0A6G0XQT4_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQT4_9STRA) HSP 1 Score: 253 bits (647), Expect = 1.110e-74 Identity = 126/248 (50.81%), Postives = 160/248 (64.52%), Query Frame = 1
Query: 133 LIRNGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIIGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGNTVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAARGEGGGFGEELDGKVDAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRSQGFHSVSTIEFRLRNINYAEVQLDVPDF 876
++ GD+V+ FE I + MK I+Q RHGAFHH+++IG +G++V+SR +KGY+Y LSPTPELWS + +RTQIV D S +IF+ PG V+ESGTGSG ++TA RT+AP G +++FEFN RA A+EEF N L +V RD C GF + L+GKVD VFLDLP PW AV HAK LK SYSPC+EQV KTC+ALR GF V TIE RL + V L +P F
Sbjct: 15 VVEEGDLVILFETHNSITYAYMKRDEIYQNRHGAFHHNDMIGHKYGTKVYSRMSKGYIYILSPTPELWSKALRHRTQIVFTLDASAIIFQTHCAPGKIVIESGTGSGALTTAFARTVAPHGHVYTFEFNATRAQVAKEEFHANGLDSVVTIECRDACEQ-----GFPDNLEGKVDVVFLDLPCPWKAVGHAKQMLKHNGAFASYSPCMEQVQKTCDALRLDGFDRVRTIETRLMPYSTRTVTLPLPSF 257
BLAST of mRNA_Ecto-sp13_S_contig735.18519.1 vs. uniprot
Match: A0A7S2WUG9_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUG9_9STRA) HSP 1 Score: 253 bits (647), Expect = 2.410e-74 Identity = 125/249 (50.20%), Postives = 170/249 (68.27%), Query Frame = 1
Query: 136 IRNGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIIGKPFGSRVFSRT-TKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGNTVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAARGEGGGFGEELDGKVDAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRSQGFHSVSTIEFRLRNINYAEVQLDVPDFG 879
I G +V+ F + + ++ +I + G FHH++IIG+PFGS +S++ T+G++YAL TPELW+ +P+RTQIV + D ++V +L++KPG V+ESGTGSG MS+ + R+++P+G L +FEFNE RA A+EEF++N L LV H DVC G GG G E G DAVFLDLPEPW+AV HA LKP +++ YSPCIEQVMKT ALR GFHS+ T+E RL++ N E VPDFG
Sbjct: 13 IAPGSLVIVFLHHDQLDHIVIQRDSILNNKWGTFHHNDIIGQPFGSIWYSKSSTRGWLYALQATPELWAMALPHRTQIVHELDAAMVTLKLNVKPGFRVIESGTGSGAMSSVLARSLSPTGHLFTFEFNENRADAAREEFKQNNLSHLVTVAHFDVCGKGGTGGFPGVE-SGTADAVFLDLPEPWVAVPHAATALKPNRRIACYSPCIEQVMKTATALRDAGFHSIETVEVRLKSYNVREFPFKVPDFG 260
BLAST of mRNA_Ecto-sp13_S_contig735.18519.1 vs. uniprot
Match: A0A024TN05_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TN05_9STRA) HSP 1 Score: 249 bits (636), Expect = 6.030e-73 Identity = 124/248 (50.00%), Postives = 159/248 (64.11%), Query Frame = 1
Query: 133 LIRNGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIIGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGNTVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAARGEGGGFGEELDGKVDAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRSQGFHSVSTIEFRLRNINYAEVQLDVPDF 876
++ GD+V+ FE I + +K I+Q RHGAFHH++IIG +G++V+SR +KGY+Y LSPTPELWS + +RTQIV D S +IF+ PG V+ESGTGSG ++TA RT+AP G +++FEFN RA A++EF N L +V RD C GF + L GKVD VFLDLP PW AV HAK LK SYSPC+EQV +TC+ALR GF + TIE RL + V L VP F
Sbjct: 28 IVEAGDLVILFETHNSITYTYVKPDEIYQNRHGAFHHNDIIGNRYGAKVYSRISKGYMYVLSPTPELWSKALRHRTQIVFTLDASSIIFQTHCAPGKIVIESGTGSGALTTAFARTVAPHGHVYTFEFNATRAQVAKDEFHANGLDSVVTIECRDACEQ-----GFPDHLAGKVDVVFLDLPCPWKAVGHAKKMLKHNGAFASYSPCMEQVQRTCDALRLDGFDRIRTIETRLMPYSARTVHLPVPSF 270
BLAST of mRNA_Ecto-sp13_S_contig735.18519.1 vs. uniprot
Match: W4FYX8_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FYX8_9STRA) HSP 1 Score: 248 bits (633), Expect = 1.800e-72 Identity = 127/248 (51.21%), Postives = 158/248 (63.71%), Query Frame = 1
Query: 133 LIRNGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIIGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGNTVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAARGEGGGFGEELDGKVDAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRSQGFHSVSTIEFRLRNINYAEVQLDVPDF 876
++ GD+VV FE I + +K I+Q RHGAFHH++IIG +G++V+SR +KGY+Y LSPTPELWS + +RTQIV D S + F+ PG V+ESGTGSG ++TA RT+AP G +++FEFN RA A+EEF N L +V RD C GF E L GKVD VFLDLP PW AV HAK LK SYSPC+EQV +TC+ALR GF V TIE RL + V L VP F
Sbjct: 27 IVEAGDLVVLFETHNSITYAYVKPDEIYQNRHGAFHHNDIIGNRYGAKVYSRMSKGYIYILSPTPELWSKALRHRTQIVFTLDASAITFQTHCAPGKIVIESGTGSGALTTAFARTVAPHGHVYTFEFNATRAQVAKEEFIANGLENVVTIECRDACEQ-----GFPEHLAGKVDVVFLDLPCPWKAVGHAKKMLKHHGAFASYSPCMEQVQRTCDALRLDGFDRVRTIETRLMPYSARTVALPVPSF 269
BLAST of mRNA_Ecto-sp13_S_contig735.18519.1 vs. uniprot
Match: A0A6U2LHT9_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2LHT9_9STRA) HSP 1 Score: 248 bits (633), Expect = 6.650e-72 Identity = 131/262 (50.00%), Postives = 171/262 (65.27%), Query Frame = 1
Query: 100 PATICEASTAPLIRNGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIIGK-PFGSRVFSRTTKGY--VYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGNTVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAAR-GEGGGFGEELDGKV-DAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRSQGFHSVSTIEFRLRNINYAEVQLDVP 870
P + E S LI+ G +VV FE + + F K ++ ++G F+HD+ I K FGS++ +R +GY V+ L PT ELW+ +P+RTQIV + D S VIF+L+LKP V+ESGTGSG MSTAIMRTIAP G LH++EFN RA A+ EFE N + LV HRDVC + GGF ++ G+ DA+FLDLPEPWLAV HA +KP +LCSYSPC+EQ + AL GFHS+ TIE RLR EV+L++P
Sbjct: 38 PLHVLERSKHELIQEGSLVVIFESFDNLSFVYAKKGDVYHNKNGDFYHDDFIDKLRFGSKLRARNHQGYGFVFLLRPTSELWARSLPHRTQIVYELDSSTVIFQLNLKPNMVVLESGTGSGAMSTAIMRTIAPYGMLHTYEFNGMRAEAARVEFERNKISHLVTVHHRDVCGKECADDGGF--DVGGQAADAIFLDLPEPWLAVPHAAFAIKPNCRLCSYSPCVEQAQRCIAALSECGFHSIKTIEVRLRENYVDEVELEMP 297 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig735.18519.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig735.18519.1 >prot_Ecto-sp13_S_contig735.18519.1 ID=prot_Ecto-sp13_S_contig735.18519.1|Name=mRNA_Ecto-sp13_S_contig735.18519.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=601bp MDFRAGRCSDGSRDPATICEASTAPLIRNGDMVVFFEGREPIGFDRMKAKback to top mRNA from alignment at Ecto-sp13_S_contig735:10935..16675+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig735.18519.1 ID=mRNA_Ecto-sp13_S_contig735.18519.1|Name=mRNA_Ecto-sp13_S_contig735.18519.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5741bp|location=Sequence derived from alignment at Ecto-sp13_S_contig735:10935..16675+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig735:10935..16675+ >mRNA_Ecto-sp13_S_contig735.18519.1 ID=mRNA_Ecto-sp13_S_contig735.18519.1|Name=mRNA_Ecto-sp13_S_contig735.18519.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1803bp|location=Sequence derived from alignment at Ecto-sp13_S_contig735:10935..16675+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |