mRNA_Ecto-sp13_S_contig7341.18508.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7341.18508.1 vs. uniprot
Match: D7FRF8_ECTSI (DLH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRF8_ECTSI) HSP 1 Score: 493 bits (1268), Expect = 1.160e-171 Identity = 235/237 (99.16%), Postives = 236/237 (99.58%), Query Frame = 1
Query: 1 AGPPVACDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFSPQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPNAEGGVKAGGTVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANDVQATRAAEAIDAFVKFYTANL 711
AGPPVACDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFSPQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDP+AEGGVKAGGTVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWAN VQATRAAEAIDAFVKFYTANL
Sbjct: 9 AGPPVACDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFSPQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPDAEGGVKAGGTVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANAVQATRAAEAIDAFVKFYTANL 245
BLAST of mRNA_Ecto-sp13_S_contig7341.18508.1 vs. uniprot
Match: A0A835Z8A5_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8A5_9STRA) HSP 1 Score: 278 bits (710), Expect = 2.380e-87 Identity = 137/237 (57.81%), Postives = 165/237 (69.62%), Query Frame = 1
Query: 1 AGPPVACDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFSPQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPNAEGGVKAGGTVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANDVQATRAAEAIDAFVKFYTANL 711
AGPP++ DY PKGTI+ IGD + YF GSGP+A+ +VYDIFG SPQ KQVCD A AGF+VAMPDF +G PW LENFPPKD+ E AW G ++ IRP AHM+E GA+V G GFCWGG IA KAA A+G V AG VH A ++ EL + V VP+ ++PSG+DPD P+KEVLDKKPFG C Y RF+DMHHGFCAARGDW+ + A RA+EA+ F NL
Sbjct: 9 AGPPISSDYEPKGTIATIGDQEVYFSGSGPRAICIVYDIFGLSPQAKQVCDKLADAGFSVAMPDFARGQPWLLENFPPKDQGEFMAWVGKHD-FDAVIRPDMERVQAHMRETMGAKVFGAIGFCWGGSIATKAAC----AQGLVAAGAAVHYAFITPELVEGVCVPLCLLPSGDDPDTAPLKEVLDKKPFGAACVYHRFEDMHHGFCAARGDWSQPLIAQRASEAVAMLSDFMDKNL 240
BLAST of mRNA_Ecto-sp13_S_contig7341.18508.1 vs. uniprot
Match: A0A0L0HMK7_SPIPD (DLH domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HMK7_SPIPD) HSP 1 Score: 196 bits (499), Expect = 1.250e-55 Identity = 106/240 (44.17%), Postives = 143/240 (59.58%), Query Frame = 1
Query: 7 PPVACDYTPKGTISKIGDVDTYFVGS-GPKALVVVYDIFGFSPQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPNAEGGVKAGGTVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANDVQATRAAEAIDAFVKFYTANL*AVL 723
PP A +Y PKG +S +GD+ TYFVG G +A++++YDIFGF P Q D AA GF VA PDF +GNPWPLE P + EL A + I +V GAE +G GFCWG + A++A N EG V A HP+ L+ E+ +DVK P+ ++PS ++PD +P+ E L +KPF DK + RFDDMHHG+CAAR D++N A R+ EA+ +F+ L A L
Sbjct: 36 PPFASNYQPKGQVSTVGDLPTYFVGEKGKRAIILIYDIFGFHPNTHQFADELAAKGFFVAEPDFYRGNPWPLEKVPIQ-LPELMAHLEQHVPESRMLAD--IGSVCRYLRSNGAESIGTLGFCWGAIYAIRA-----NVEGLVDASAAAHPSRLTVEIVKDVKGPLALLPSKDEPDLIPLMEALKEKPFVDKNVHVRFDDMHHGWCAARSDYSNPANARRSREALQIMARFFDETLQAKL 267
BLAST of mRNA_Ecto-sp13_S_contig7341.18508.1 vs. uniprot
Match: A0A836BBU2_9CHLO (DLH domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BBU2_9CHLO) HSP 1 Score: 191 bits (485), Expect = 6.920e-54 Identity = 106/235 (45.11%), Postives = 131/235 (55.74%), Query Frame = 1
Query: 1 AGPPVACDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFS-PQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPNAEGGVKAGGTVHPAMLS--AELAQDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANDVQATRAAEAIDAFVKF 696
AG PV Y PKGT +K G D Y G+G LV+V DIFGF Q+ QV D FA AGFNV D G PW ++ FPPK + W G G W+ ++P AVA +KE GA G GFCWG IAM+A E G HPA+ A A+ V+ PV+++P+ D D PVK VLD++P+G KC Y+RFDD HGF AARGDW+ A A +AI F
Sbjct: 10 AGAPVVSSYEPKGTFTKAGSTDVYRSGAGALGLVIVPDIFGFGHKQVFQVADRFAEAGFNVCAIDPFHGKPWTMDKFPPKPEHDFMGWIGREGSWQ-KLQPQVAAAVAKLKE-AGATKFGCIGFCWGVSIAMQAGQ-----EATFSGVGGAHPALFGKDAAFAEKVQCPVVLLPAQGDADTAPVKAVLDRRPYGSKCVYQRFDDQTHGFVAARGDWSKPEVAAAAGKAIGIMADF 237
BLAST of mRNA_Ecto-sp13_S_contig7341.18508.1 vs. uniprot
Match: A0A1Y1Y5T6_9FUNG (Alpha/beta-hydrolase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y5T6_9FUNG) HSP 1 Score: 190 bits (482), Expect = 1.800e-53 Identity = 99/238 (41.60%), Postives = 132/238 (55.46%), Query Frame = 1
Query: 7 PPVACDYTPKGTISKIGDVDTYFVG--SGPKALVVVYDIFGFSPQLKQVCDMFAAA-GFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPNAEGGVKAGGTVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANDVQATRAAEAIDAFVKFYTANL 711
PPV DY PKG+I KI D+ YFVG KA+VV+YDIFGF P KQ CD+ F VA+PDF +G PW P+DR L W + G W+ + +P H+ G+ GV GFCWG + + A +G A +HP++L+ E A+ + P+L++PS ++PD E+L KK FG KC Y FDDMHHGF AARGD+ + R EAI F+ N+
Sbjct: 11 PPVVSDYQPKGSIEKIDDLSVYFVGPKDAKKAVVVIYDIFGFHPNTKQFCDILGEKFNFRVALPDFFRGKPWDHTRMTPEDRPALMQWITSVGSWDNT-KPDLEKVKKHLSSS-GSTDFGVVGFCWGAKMGVLATR-----DGSFSAASLIHPSLLADEDAELAEAPILLIPSKDEPDLTKFVEILKKKSFGSKCSYHLFDDMHHGFAAARGDYNDPANVKRTTEAIQLTGDFFQNNV 241
BLAST of mRNA_Ecto-sp13_S_contig7341.18508.1 vs. uniprot
Match: A0A2K3CV50_CHLRE (DLH domain-containing protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3CV50_CHLRE) HSP 1 Score: 189 bits (480), Expect = 4.100e-53 Identity = 107/235 (45.53%), Postives = 133/235 (56.60%), Query Frame = 1
Query: 1 AGPPVACDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFS-PQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPNAEGGVKAGGTVHPAMLS--AELAQDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANDVQATRAAEAIDAFVKF 696
AG PV DY PKGT +K G D Y GSG +V+V DIFGF Q+ QV D FA AGFNV D G PW + FPPK + W W+ ++P AVA +KE GA G GFCWG IAM+A D + GV G HPA+ A+ A+ V+ PV+++P+ D D PV++VLDK+P+G KC Y+RFDD HGF AARGDW A A +AI F
Sbjct: 10 AGAPVVSDYEPKGTFTKAGSTDVYHSGSGALGVVIVPDIFGFGHKQVFQVADRFADAGFNVCAIDPFHGKPWTKDRFPPKPEHDFMGWLSREASWD-KLKPQIDAAVAKLKEG-GASKFGCIGFCWGVSIAMQAGQ-DGHTFSGV---GGAHPALFGHDADFAEKVQCPVVLLPAQGDADTGPVQKVLDKRPYGSKCVYQRFDDQTHGFVAARGDWTKPEVAAAAGKAIGIMTDF 238
BLAST of mRNA_Ecto-sp13_S_contig7341.18508.1 vs. uniprot
Match: A0A835W382_CHLIN (DLH domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835W382_CHLIN) HSP 1 Score: 189 bits (479), Expect = 5.750e-53 Identity = 107/235 (45.53%), Postives = 133/235 (56.60%), Query Frame = 1
Query: 1 AGPPVACDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFS-PQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPNAEGGVKAGGTVHPAMLSAEL--AQDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANDVQATRAAEAIDAFVKF 696
AG PV +Y PKGT K G D Y GSG +V++ DIFGF Q+ QV D FA AGFNV D G PW ++ FPPK + W G W+ ++P AVA +K GA G GFCWG IAM AA D + GV G HPA+ +L A+ V+ PV+++P+ D D PVK+VLDK+P+G KC Y+RFDD HGF AARGDW+ A A AI F
Sbjct: 10 AGAPVVSNYEPKGTFEKAGSADVYRSGSGALGVVIIPDIFGFGHKQVFQVADRFAEAGFNVCAIDPFHGKPWTMDRFPPKPEHDFKGWLGREAGWD-KLKPQVDAAVAKLKA-AGATKFGCIGFCWGVSIAM-AAGQDGHTFSGV---GGAHPALFGHDLDYAEKVQCPVVLLPAQGDADTAPVKKVLDKRPYGTKCVYQRFDDQTHGFVAARGDWSKPEVAAAAGRAIGLMADF 238
BLAST of mRNA_Ecto-sp13_S_contig7341.18508.1 vs. uniprot
Match: A0A835W025_CHLIN (DLH domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835W025_CHLIN) HSP 1 Score: 184 bits (468), Expect = 7.560e-51 Identity = 105/235 (44.68%), Postives = 134/235 (57.02%), Query Frame = 1
Query: 1 AGPPVACDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFS-PQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPNAEGGVKAGGTVHPAMLSAEL--AQDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANDVQATRAAEAIDAFVKF 696
AG PV +Y PKGT + G D Y GSG LV+V DIFGFS Q+ QV D FA GFNV + D GNPWP+E FPPK + W G W +RP AVA +KE A G GFCW IAM+A +P G GG HP++ +L A+ V+ PV+++P+ D D P+K++LD++ +G KC Y+RFDD HGF AARGDW+ A A AI +F
Sbjct: 10 AGAPVVSNYEPKGTFERAGSTDVYRSGSGALGLVLVPDIFGFSHKQVFQVADRFAETGFNVCVIDPFHGNPWPMEKFPPKPEHDFKGWLTREGGWG-KVRPHVHDAVAKLKE-ASATKFGCIGFCWSVSIAMQAGQ-EPTFSG---VGGP-HPSLFGHDLDYAEKVQCPVVLLPAEGDGDTAPIKKILDRRSYGSKCVYQRFDDQTHGFVAARGDWSKPEVAAAAGRAIGLMAEF 237
BLAST of mRNA_Ecto-sp13_S_contig7341.18508.1 vs. uniprot
Match: A8J3U5_CHLRE (Predicted protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8J3U5_CHLRE) HSP 1 Score: 183 bits (465), Expect = 2.750e-50 Identity = 101/235 (42.98%), Postives = 130/235 (55.32%), Query Frame = 1
Query: 1 AGPPVACDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFS-PQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPNAEGGVKAGGTVHPAMLSAEL--AQDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANDVQATRAAEAIDAFVKF 696
AG PV Y PKGT + G + Y GSG LV+V D+FGF+ Q+ QV D FA AGFNV + D GNPWP++ FPPK + W W +RP VA +KE GA G GFCWG IAM+A E G HPA+ +L + V+ PV+++P+ D D P+K++LD++P+G KC Y+RFDD HGF AARGDW A A +AI F
Sbjct: 12 AGAPVVSTYEPKGTFERAGSTEIYHSGSGALGLVMVPDVFGFAHKQVFQVADRFADAGFNVCVMDPFHGNPWPMDKFPPKPEHDFQGWLTREAGWG-KMRPHVHDVVAKLKEG-GASKFGCIGFCWGVSIAMQAGQ-----ETTFSGVGGAHPALFGHDLDYTEKVQCPVVLLPAQGDADTAPIKKILDRRPYGSKCVYQRFDDQTHGFVAARGDWTKPEVAAAAGKAIGIMADF 239
BLAST of mRNA_Ecto-sp13_S_contig7341.18508.1 vs. uniprot
Match: A0A836BBS3_9CHLO (DLH domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BBS3_9CHLO) HSP 1 Score: 182 bits (462), Expect = 7.100e-50 Identity = 100/235 (42.55%), Postives = 131/235 (55.74%), Query Frame = 1
Query: 1 AGPPVACDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFS-PQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPNAEGGVKAGGTVHPAMLSAEL--AQDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANDVQATRAAEAIDAFVKF 696
AG PV Y PKGT + G D Y +G+G +V+V DIFGF Q+ QV D FA AGFNV + D GNPW ++ FPPK + W W +RP AVA +KE GA G GFCWG IAM+A E G HP++ +L A+ V+ PV+++P+ D D P+K++LD++ +G KC Y+RFDD HGF AARGDW+ A A +AI F
Sbjct: 10 AGAPVVSTYEPKGTFERAGSTDVYLIGAGALGVVLVPDIFGFGHKQVFQVADRFAEAGFNVCVMDPFHGNPWTMDKFPPKPEHDFKGWLAREAGWGR-MRPHVHDAVAKLKE-AGATKFGCIGFCWGVSIAMQAGQ-----EATFSGVGGPHPSLFGHDLDFAEKVQCPVVLLPAEGDADTAPIKKILDRRAYGSKCVYQRFDDQTHGFVAARGDWSKPEVAAAAGKAIGIMADF 237 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7341.18508.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7341.18508.1 >prot_Ecto-sp13_S_contig7341.18508.1 ID=prot_Ecto-sp13_S_contig7341.18508.1|Name=mRNA_Ecto-sp13_S_contig7341.18508.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=187bp MFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTback to top mRNA from alignment at Ecto-sp13_S_contig7341:1208..5834+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7341.18508.1 ID=mRNA_Ecto-sp13_S_contig7341.18508.1|Name=mRNA_Ecto-sp13_S_contig7341.18508.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4627bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7341:1208..5834+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7341:1208..5834+ >mRNA_Ecto-sp13_S_contig7341.18508.1 ID=mRNA_Ecto-sp13_S_contig7341.18508.1|Name=mRNA_Ecto-sp13_S_contig7341.18508.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=561bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7341:1208..5834+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |