mRNA_Ecto-sp13_S_contig7328.18496.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7328.18496.1 vs. uniprot
Match: A0A6H5LDY8_9PHAE (DAO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDY8_9PHAE) HSP 1 Score: 603 bits (1556), Expect = 4.530e-213 Identity = 337/359 (93.87%), Postives = 344/359 (95.82%), Query Frame = 3
Query: 66 MKGRRVPIRGIVPLVLCASAAARMPLAGKMAFANQAMFSSCCSRKGRATVRGSXXXXXXXXXXXXXXXVAADEDLDAAVKAAVGALPSRPRVAVVGGGFAGLAAAYHLAAFGSDVTVFDPHEAGTGSGASSVAAGLLHPLTPRGKLIWKGEEGFEAAKHLIQTVNDKLVDDAA-AAGDDAAQANGPRGCLTTDNVYRPLMDEKQVDLFTKAAEDLPQWVESLTREEIMKAVPGSTPECLGGVRIRGALAVDAPTYLKGLWSACRALVNAADADSNASGDSGGGDDGASSSPSRKEGATWVRQSVEDVHALAASGEFNAVVACVGAGVRALAGVKDIVSLRLVRGQALLYDNVGAARAAE 1139
MKGRRVPIRGIVPLVLCASAAARMPLAGKMAFANQAMFSSCCSRKGRAT R S XXXXXXXXXXX A DE+LDAAVKAAVGALPSRPRVAVVGGGFAGLAAAYHLAAFGSDVTVFDPHEAGTGSGAS+VAAGLLHPLTPRGKLIWKGEEGFEAAKHLIQTVNDKLV DAA AAGDDAA ANGPRGCLTTD+VYRPLMDEKQVDLFTKAAEDLPQWVESLTREEIM+AVPGSTPECLGGVRIRGALAVDAPTYLKGLWSACRALVNAAD D NA+GD+ GGD+GASSSPSRKEGATWVRQSVEDVHALAASGEFNAVVACVGAGVRALAGVKDIVSLRLVRGQ LLYDNVGAARAAE
Sbjct: 1 MKGRRVPIRGIVPLVLCASAAARMPLAGKMAFANQAMFSSCCSRKGRATSRASCSSSXXXXXXXXXXXXA-DENLDAAVKAAVGALPSRPRVAVVGGGFAGLAAAYHLAAFGSDVTVFDPHEAGTGSGASTVAAGLLHPLTPRGKLIWKGEEGFEAAKHLIQTVNDKLVHDAAVAAGDDAAPANGPRGCLTTDSVYRPLMDEKQVDLFTKAAEDLPQWVESLTREEIMEAVPGSTPECLGGVRIRGALAVDAPTYLKGLWSACRALVNAADVDRNANGDTSGGDNGASSSPSRKEGATWVRQSVEDVHALAASGEFNAVVACVGAGVRALAGVKDIVSLRLVRGQTLLYDNVGAARAAE 358
BLAST of mRNA_Ecto-sp13_S_contig7328.18496.1 vs. uniprot
Match: D7FNS1_ECTSI (DAO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNS1_ECTSI) HSP 1 Score: 436 bits (1122), Expect = 1.860e-149 Identity = 230/241 (95.44%), Postives = 236/241 (97.93%), Query Frame = 3
Query: 369 LAAAYHLAAFGSDVTVFDPHEAGTGSGASSVAAGLLHPLTPRGKLIWKGEEGFEAAKHLIQTVNDKLVDDAAAA-GDDAAQANGPRGCLTTDNVYRPLMDEKQVDLFTKAAEDLPQWVESLTREEIMKAVPGSTPECLGGVRIRGALAVDAPTYLKGLWSACRALVNAADADSNASG-DSGGGDDGASSSPSRKEGATWVRQSVEDVHALAASGEFNAVVACVGAGVRALAGVKDIVSLRL 1085
+AAAYHLAAFGSDVTVFDPHEAGTGSGASSVAAGLLHPLTPRGKLIWKGEEGFEAAKHLIQTVNDKLVDDAAAA GDDA+ ANGPRGCLTT++VYRPLMDEKQVDLFTKAAEDLPQWVESLTREEIM+AVPGSTPECLGGVRIRGALAVDAPTYLKGLWSACRALVNAADAD NASG DS GGDDGASSSPSRKEGATWVRQSVEDVHALAASGEFNAVVACVGAGV+ALAGVKDIVSLRL
Sbjct: 1 MAAAYHLAAFGSDVTVFDPHEAGTGSGASSVAAGLLHPLTPRGKLIWKGEEGFEAAKHLIQTVNDKLVDDAAAAAGDDASPANGPRGCLTTNSVYRPLMDEKQVDLFTKAAEDLPQWVESLTREEIMEAVPGSTPECLGGVRIRGALAVDAPTYLKGLWSACRALVNAADADRNASGGDSSGGDDGASSSPSRKEGATWVRQSVEDVHALAASGEFNAVVACVGAGVKALAGVKDIVSLRL 241
BLAST of mRNA_Ecto-sp13_S_contig7328.18496.1 vs. uniprot
Match: A0A835YVN0_9STRA (DAO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVN0_9STRA) HSP 1 Score: 150 bits (380), Expect = 5.100e-38 Identity = 81/162 (50.00%), Postives = 105/162 (64.81%), Query Frame = 3
Query: 369 LAAAYHLAAFGSDVTVFDPHEAGTGSGASSVAAGLLHPLTPRGKLIWKGEEGFEAAKHLIQTVNDKLVDDAAAAGDDAAQANGPRGCLTTDNVYRPLMDEKQVDLFTKAAEDLPQWVESLTREEIMKAVPGSTPECLGGVRIRGALAVDAPTYLKGLWSACR 854
LA AY+L +FG+ VTV+D HEAG G GAS+VAAG+LHPLTPRGKLIW G+EG AA I+ A A AA + +T + RP+MD + D++ KAA PQW+ LT EE+ A PG++P+ L GV I GA+A+D+ YL+GLW ACR
Sbjct: 35 LATAYNLVSFGACVTVYDDHEAGDG-GASAVAAGMLHPLTPRGKLIWGGKEGLAAAMDHIEA--------ATRALHSAALLPRDQTLITAQRIVRPIMDARAHDMYAKAAAANPQWLRWLTTEELCDAAPGTSPDALAGVEIAGAIAIDSRLYLRGLWEACR 187
BLAST of mRNA_Ecto-sp13_S_contig7328.18496.1 vs. uniprot
Match: A0A7S3K454_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K454_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.870e-24 Identity = 93/269 (34.57%), Postives = 121/269 (44.98%), Query Frame = 3
Query: 339 VAVVGGGFAGLAAAYHLAAFGSDVTVFDP--------HEAGTGSGASSVAAGLLHPLTPRGKLIWKGEEGFEAAKHLIQTVNDKLVDDAAAAGDDAAQANGPRGCLTTDNVYRPLMDEKQVDLFTKAAEDL-PQWVESLTREEIMKAVPGSTPECLGGVRIRGALAVDAPTYLKGLWSACRALVNAADADSNASGDSGGGDDGASSSPSRKEGATWVRQSVEDVHALAASGEFNAVVACVGAGVRALAGVKDIVSLRLVRGQALLYDNV 1118
VAV+GGG GL YHL A G VTV D ++ G AS+VAAGLLHPL+PR K+ W GEE ++ A LIQ AAG D +T+ VYRP D++ D TKAA L P+ +E L + AVP S GGVRI A +DA Y+ LW AC GA W + + ++ GEF+ V+ C GA + D SL +RGQ++ +V
Sbjct: 11 VAVIGGGLCGLGTTYHLLARGHHVTVIDGACNRGVAINDNGHFRTASAVAAGLLHPLSPRLKMTWCGEEAYDMAFELIQ-----------AAGSDQI--------VTSSEVYRPCRDDEDRDAVTKAASKLGPKELEILDANTLTAAVPWSAMTRFGGVRIVRARVIDAQRYMSLLWKACECR-----------------------------GAVWQFRQISNIDEFYLQGEFDRVIFCGGASGLGNKLLGDQTSL--IRGQSVKLHSV 229
BLAST of mRNA_Ecto-sp13_S_contig7328.18496.1 vs. uniprot
Match: A0A7S3VE17_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VE17_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.790e-23 Identity = 71/179 (39.66%), Postives = 95/179 (53.07%), Query Frame = 3
Query: 339 VAVVGGGFAGLAAAYHLAAF--GSDVTVFDPHEAGTGSGASSVAAGLLHPLTPRGKLIWKGEEGFEAAKHLIQTVNDKLVDDAAAAGDDAAQANGPRGCLTTDNVYRPLMDEKQVDLFTKAAEDLPQWVESLTREEIMKAVPGSTPECLGGVRI-RGALAVDAPTYLKGLWSACRALVN 866
+A+VGGG AG++AAYHL GS +T+ D G G GAS+VA GLLHP +PRGKL+ G EG AA LI AA + P C+ D +YR + EK VD A P++ ++ +EI S+ LGGV G + PTY++GLWSAC+ + N
Sbjct: 55 IAIVGGGLAGMSAAYHLLEKIQGSSITIIDKAGPGEG-GASAVAGGLLHPFSPRGKLLHLGVEGLNAANRLIG----------------AANRHQPN-CVLRDQLYRVALTEKNVDQLKDTANLYPKYATWVSPDEIESNCRPSSDSILGGVLFSNGCKVIHVPTYIQGLWSACQEMSN 215
BLAST of mRNA_Ecto-sp13_S_contig7328.18496.1 vs. uniprot
Match: A0A7S3QF33_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QF33_9STRA) HSP 1 Score: 109 bits (272), Expect = 7.420e-23 Identity = 71/179 (39.66%), Postives = 95/179 (53.07%), Query Frame = 3
Query: 339 VAVVGGGFAGLAAAYHLAAF--GSDVTVFDPHEAGTGSGASSVAAGLLHPLTPRGKLIWKGEEGFEAAKHLIQTVNDKLVDDAAAAGDDAAQANGPRGCLTTDNVYRPLMDEKQVDLFTKAAEDLPQWVESLTREEIMKAVPGSTPECLGGVRI-RGALAVDAPTYLKGLWSACRALVN 866
+A+VGGG AG++AAYHL GS +T+ D G G GAS+VA GLLHP +PRGKL+ G EG AA LI AA + P C+ D +YR + EK VD A P++ ++ +EI S+ LGGV G + PTY++GLWSAC+ + N
Sbjct: 55 IAIVGGGLAGMSAAYHLLEKIQGSSITIIDKAGPGEG-GASAVAGGLLHPFSPRGKLLHLGVEGLNAANRLIG----------------AANRHQPN-CVLRDQLYRVALTEKNVDQLKDTANLYPKYATWVSPDEIESNCRPSSDSILGGVLFSNGCKVIHVPTYIQGLWSACQEMSN 215
BLAST of mRNA_Ecto-sp13_S_contig7328.18496.1 vs. uniprot
Match: A0A7S2UXM2_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXM2_9STRA) HSP 1 Score: 106 bits (265), Expect = 5.340e-22 Identity = 89/287 (31.01%), Postives = 128/287 (44.60%), Query Frame = 3
Query: 336 RVAVVGGGFAGLAAAYHL---------------------------AAFGSDVTVFDPHEAGTGSGASSVAAGLLHPLTPRGKLIWKGEEGFEAAKHLIQTVNDKLVDDAAAAGDDAAQANGPRGCLTTDNVYRPLMDEKQVDLFTKAAEDLPQWVESLTREEIMKAVPGSTPECLGGVRIRGALAVDAPTYLKGLWSACRALVNAADADSNASGDSGGGDDGASSSPSRKEGATWVRQSVEDVHALAASGEFNAVVACVGAGVRALAGVKDIVSLRLVRGQALLYDN 1115
++ +VGGG AGL AY L G VT+ DP GTG GAS+ AAGLLHPLTPRG+L W+ E E A ++++ + L + A G GC+T V RPL ++ V+ FT A E P+ + + E V IR L +D P YL+GLW AC+ A AS S R + + V ++ + V +++ VV GAG+ A +K + + +LVRGQ LL+++
Sbjct: 72 KICIVGGGLAGLGVAYQLLFAESWLHSADEIHDQAVQERGKEGAPVDSGVQVTILDPCPPGTG-GASAAAAGLLHPLTPRGRLGWRASEAMEVALNMVEVADGALKE--ATGG----------GCVTCRRVIRPLFTDRHVETFTDAQERFPEELTWMDANEYADTVGLLDESVQAAADIRQGLGLDTPAYLRGLWLACQGTGRATWVPQRL----------ASLSRERSDEESNVERA-DAVELADLVEKYDTVVLAAGAGMMAFEELKGLPT-KLVRGQTLLFEH 333
BLAST of mRNA_Ecto-sp13_S_contig7328.18496.1 vs. uniprot
Match: K8YPY8_NANGC (DAO domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YPY8_NANGC) HSP 1 Score: 105 bits (261), Expect = 3.370e-21 Identity = 86/263 (32.70%), Postives = 127/263 (48.29%), Query Frame = 3
Query: 324 PSRPRVAVVGGGFAGLAAAYHLAAFGSDVTVFDPHEAGTGSGASSVAAGLLHPLTPRGKLIWKGEEGFEAAKHLIQTVNDKLVDDAAAAGDDAAQANGPRGCLTTDNVYRPLMDEKQVDLFTKAAEDLPQWVESLTREEIMK--AVPGSTPECLGGVRIRGALAVDAPTYLKGLWSACRALVNAADADSNASGDSGGGDDGASSSPSRKEGATWVRQSVEDVHALAASGEFNAVVACVGAGVRALAGVKDIVSLRLVRGQALL 1106
PS +VAVVGGG AGL+ A+HL V++FDP G AS+VA GLLHPLTP+ +L+W G GFEA L+ + L + AG A++ G + RP + + V F AA+ LP W++ L EE + VPG G+ +R + + P YL+GLW + +A SS+ E + + V+ A +++ VV GAG+RA ++ + + VRG+ LL
Sbjct: 51 PSNLKVAVVGGGLAGLSTAWHLTGLVKQVSIFDPRPPGQAE-ASAVAGGLLHPLTPKNRLLWCGLRGFEATSRLVVSSKTALSNYGDTAG--ASRLQSAPGAI-----LRPALTSQHVIDFQAAAKRLPNWLKWLNGEEWEQKVGVPGH------GLLLRQSAILSMPDYLRGLWLSSQARAER------------------SSTALTWESSLFTADCVKQSGA-----KYDVVVLASGAGIRAFPELEHL-PVEFVRGRTLL 275
BLAST of mRNA_Ecto-sp13_S_contig7328.18496.1 vs. uniprot
Match: A0A7R9XSU7_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A0A7R9XSU7_9CHLO) HSP 1 Score: 104 bits (260), Expect = 3.500e-21 Identity = 99/286 (34.62%), Postives = 127/286 (44.41%), Query Frame = 3
Query: 336 RVAVVGGGFAGLAAAYHLA----AFGSDVTVFDPHEAGTGSGASSVAAGLLHPLTPRGKLIWKGEEGFEAAKHLIQT----------VNDKLVDDAAAAG-DDAAQANGPRG---CLTTDNVYRPLMDEKQVDLFTKAA------EDLPQWVESLTREEIMKAVPG------------STPECLGGVRIRGALAVDAPTYLKGLWSACRALVNAADADSNASGDSGGGDDGASSSPSRKEGATWVRQSVEDVHALAASGEFNAVVACVGAGVRALAGVKDI-VSLR 1082
RVAVVGGGFAG+AAA+ A G V + AG G GAS VAAGLLHP TPRGK IW+GEEG A+ L+ + + DDA DDA + G R + + RP KQ F A +D V+ +T +E++ PG + C GG+ + + VDAP YL LW AC L + A + AT ++DV AL EF+ V C GAGV AL + I VSL+
Sbjct: 18 RVAVVGGGFAGVAAAFRTLEEANARGRAVELTLIDGAGVGGGASGVAAGLLHPYTPRGKTIWRGEEGAARARRLLDAAARAEDAMDAMGAERSDDADGGWRDDAGRNTGERRGERVASAPGIVRPARSAKQGRDFAANAGRGDDDDDAAFAVKRVTTDEVVAMCPGLEFTSDVIEAERNGEACAGGMFVPNGVVVDAPRYLTALWDACGILASRGAAGTR---------------------ATLRIAEIDDVKALL--DEFDQVALCCGAGVAALFDFETIPVSLQ 280
BLAST of mRNA_Ecto-sp13_S_contig7328.18496.1 vs. uniprot
Match: A0A7S0JJZ7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JJZ7_9EUKA) HSP 1 Score: 103 bits (257), Expect = 4.150e-21 Identity = 96/288 (33.33%), Postives = 134/288 (46.53%), Query Frame = 3
Query: 294 AAVKAAVGALPSRPRVAVVGGGFAGLAAAYHLAAFGSDVT----------VFDPHEAGTGSGASSVAAGLLHPLTPRGKLIWKGEEGFEAAKHLIQTVNDKLVDDAAAAGDDAAQANGPRGCLTTDNVYRPLMDEKQVDLFTKAAEDLPQWVES-LTREEIMKAVPGSTPECLGGVRIRGALAVDAPTYLKGLWSACRALVNAADADSNASGDSGGGDDGASSSPSRKEGATWVRQSVEDVHALAAS-GEFNAVVACVGAGVRALAGVKDIVSLRLVRGQALLYDNVG 1121
AA +A A P+ RVAVVGGG AGLA +YHL + T VFD G GAS+VAAGLLHP +P+G+ +W+GEEGFEAA+ +I+ AAG D + G L N E+ +L + + L +E L E + + +G AL +D +YLK LW AC L GG E +W RQS+ + ++ AS G ++ +V G+G + +A ++ + LRL RGQ LL G
Sbjct: 69 AAPRARAHARPAPMRVAVVGGGLAGLAVSYHLLNQSATCTGGAPLIECLHVFDAAPPSEG-GASAVAAGLLHPFSPKGRALWRGEEGFEAAQDMIRAAE-------RAAGKDVSACTG---LLRLANHA-----EQAAELRSNVEQQLKGPLEQRLLSMESASDLAKHPLDAIGFSHAPWALTLDTRSYLKALWHACCNL---------------GG-----------EAVSWRRQSISSIQSVQASHGPYDVIVVAAGSGCKGMAELRQL-PLRLCRGQNLLLQADG 313 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7328.18496.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7328.18496.1 >prot_Ecto-sp13_S_contig7328.18496.1 ID=prot_Ecto-sp13_S_contig7328.18496.1|Name=mRNA_Ecto-sp13_S_contig7328.18496.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=358bp MKGRRVPIRGIVPLVLCASAAARMPLAGKMAFANQAMFSSCCSRKGRATVback to top mRNA from alignment at Ecto-sp13_S_contig7328:4994..7508- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7328.18496.1 ID=mRNA_Ecto-sp13_S_contig7328.18496.1|Name=mRNA_Ecto-sp13_S_contig7328.18496.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2515bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7328:4994..7508- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7328:4994..7508- >mRNA_Ecto-sp13_S_contig7328.18496.1 ID=mRNA_Ecto-sp13_S_contig7328.18496.1|Name=mRNA_Ecto-sp13_S_contig7328.18496.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1074bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7328:4994..7508- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |