mRNA_Ecto-sp13_S_contig7314.18477.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7314.18477.1 vs. uniprot
Match: A0A6H5JTX4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTX4_9PHAE) HSP 1 Score: 611 bits (1575), Expect = 1.170e-213 Identity = 318/361 (88.09%), Postives = 326/361 (90.30%), Query Frame = 1
Query: 1 RAQVPEQDPLLETTPPASIAHTAPLDGATKPNFRNSQGAAVGMRSRTPTRDSGPAGSAGGEGEAAAVAAERGGSQLGNAPLSPKTTAGGAGARGGRELSFWGFTKQLSSHGNFWLYVSMNFMENFNALFDQSFFVFLDTKLFERVVPRRPHGVLTALCLYAPK---------LMTQVLTPVADRYGTYKLIMGAALFKLVAGVLMFTCGRRAWPLWTLLFLGNRLAATAWGFYNLSFSDVIDEDTLRNKRPESMSVSVHGLQALFVKPAQSLAPMFGMAFLPAGALKTDLVDMTVRQAEGVQAAAFTLMWAVPAGCGLVQVLIWRAYRLHGAALKDMKMKLKEWERFLSYKRDDATGVGMA 1056
R +VPEQDPLLE+TPPASI HTAPLDGATKPN RN+QGAAVGMRSRTPTRDSGPAGS AA RG S +GNAPLSPKTTAGGAGARGGRELSFWGFTKQLSSHGNFWLYV + NFNALFDQSFFVFLDTKLFE VVPR PHGVLTALCLYAPK LMTQVLTPVADRYGTYKLIMGAALFKLVAGVLMF CGR+AWP+WTLLFLGNRLAATAWGFYNLSFSDVIDEDTLRNKRPESMSVSVHGLQALFVKPAQSLAPM GMAFLPAGALKTDLVDMT+RQAEGVQAAAFTLMWAVPAGCGLVQVLIWRAYRLHGAALKDMKMKLKEWERFLSYK DDATGVGMA
Sbjct: 216 RREVPEQDPLLESTPPASITHTAPLDGATKPNSRNNQGAAVGMRSRTPTRDSGPAGSXXXXXXXXXXAAGRGVSLMGNAPLSPKTTAGGAGARGGRELSFWGFTKQLSSHGNFWLYVPSS---NFNALFDQSFFVFLDTKLFEMVVPRGPHGVLTALCLYAPKVRNTALTRILMTQVLTPVADRYGTYKLIMGAALFKLVAGVLMFACGRQAWPMWTLLFLGNRLAATAWGFYNLSFSDVIDEDTLRNKRPESMSVSVHGLQALFVKPAQSLAPMVGMAFLPAGALKTDLVDMTMRQAEGVQAAAFTLMWAVPAGCGLVQVLIWRAYRLHGAALKDMKMKLKEWERFLSYKSDDATGVGMA 573
BLAST of mRNA_Ecto-sp13_S_contig7314.18477.1 vs. uniprot
Match: UPI0001CBA663 (transmembrane protein 180-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBA663) HSP 1 Score: 115 bits (288), Expect = 3.740e-24 Identity = 75/236 (31.78%), Postives = 121/236 (51.27%), Query Frame = 1
Query: 289 ELSFWGFTKQLSSHGNFWLYVSMNFMENFNALFDQSFF-VFLDTKLFERVVPRRPHGVLTALCLYAPKLMTQVL-TPVADRYGTYKLIMGAALFKLVAGVLMFTCGR-RAWPLWTLLFLGNRLAATAWGFYNLSFSDVIDEDTLRNKRPESMSVSVHGLQALFVKPAQSLAPMFGMAFLPAGALKTDLVDMTVRQAEGVQAAAFTLMWAVPAGCGLVQVLIWRAYRLHGAALKDMK 987
E S W +KQ+ S NF ++V MNF + F+ F +F +F D + ++ R L PK++ + + V +R+G+YK+I+ + K++ G+LMF+ GR W L + L A+ F+ + SD+ID+D R KR +S + G ALF KPAQS+APM ++ L ++ + + + A F L+ AVP G+ Q+L W Y L + L+ K
Sbjct: 235 ENSIWKLSKQIISEKNFLMFVIMNFCQVFHLAFGSNFLAIFGDALIPQKTCRRYFRKFLYGSSSMVPKVLIILFGSLVMERFGSYKVILISFYIKVITGILMFSLGRSHTWCLVIFFLMDRSLPYCAFSFFKMPLSDIIDDDAARFKRKSPLSSMMFGTNALFTKPAQSVAPMLVVSILNRHGYQSAISHGHMEDNSELLDAIFLLVCAVPTVLGVCQLLAWLQYTLRSSHLETPK 470
BLAST of mRNA_Ecto-sp13_S_contig7314.18477.1 vs. uniprot
Match: A0A369SLA8_9METZ (Transmembrane protein 180 n=1 Tax=Trichoplax sp. H2 TaxID=287889 RepID=A0A369SLA8_9METZ) HSP 1 Score: 113 bits (282), Expect = 2.100e-23 Identity = 68/234 (29.06%), Postives = 124/234 (52.99%), Query Frame = 1
Query: 289 ELSFWGFTKQLSSHGNFWLYVSMNFMENFNALFDQSFF-VFLDTKLFERVVPRRPHGVLTALCLYAPKLMTQVLTPVADRYGTYKLIMGAALFKLVAGVLMFTCGRRAWPLWTLLF--LGNRLAATAWGFYNLSFSDVIDEDTLRNKRPESMSVSVHGLQALFVKPAQSLAPMFGMAFLPAGALKTDLVDMTVRQAEGVQAAAFTLMWAVPAGCGLVQVLIWRAYRLHGAALKD 981
+++ + KQ++++ F L+V MNF++ F+ +FF +F D + ++P+ ++ P+++ + +P+ R+G+Y+ IM + K + MF G ++ + F L L + +NLS SD+ID+D + KR +S + G ALF KPAQSLAPMF ++FL + +T+ ++ A F+++ VP ++Q+LIW Y L G +K+
Sbjct: 225 DITLYTLFKQITTNKQFALFVLMNFLQIFHNTIGSNFFSIFADNLIGSSLLPQA-RSIMAGSAFVLPQILVLLFSPLLARFGSYRCIMVSFFVKFALALAMFLSGPSN-MIFLIFFMVLDRSLPEATFSLFNLSVSDIIDDDRAKYKRRAPISSMIFGTNALFTKPAQSLAPMFVVSFLTGYGYQHGSQAVTIPAKPELRQAMFSMICLVPIVASVIQILIWSFYSLRGQRVKN 456
BLAST of mRNA_Ecto-sp13_S_contig7314.18477.1 vs. uniprot
Match: A0A6P8IHK0_ACTTE (transmembrane protein 180-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IHK0_ACTTE) HSP 1 Score: 110 bits (275), Expect = 1.830e-22 Identity = 70/225 (31.11%), Postives = 112/225 (49.78%), Query Frame = 1
Query: 301 WGFTKQLSSHGNFWLYVSMNFMENFNALFDQSFF-VFLDTKLFERVVPRRPHGVLTALCLYAPKLMTQVLTPVADRYGTYKLIMGAALFKLVAGVLMFTCGRR-AWPLWTLLFLGNRLAATAWGFYNLSFSDVIDEDTLRNKRPESMSVSVHGLQALFVKPAQSLAPMFGMAFLPAGALKTDLVDMTVRQAE---GVQAAAFTLMWAVPAGCGLVQVLIWRAYRL 960
W KQL S N +V+MNF + F++ F +FF +F + + V+P + P+++ VL+ + +YG+Y LI+ + KL L++ GR+ W L + F L A + +NLS +D++D D + +R +S + G ALF KPAQSLAPM + L + T+R + +Q F LM VP +Q+++WR Y L
Sbjct: 228 WTLLKQLISQKNLVFFVTMNFFQVFHSTFQSNFFLIFAEYLIGPDVLPAFGLSFIAGSSYVVPQIIVLVLSTLLSKYGSYYLILWSMYIKLTMATLVYIFGRQYIWLLAFMFFADRSLQAASTSLFNLSLADIVDSDXEKYRRRSPVSSMIFGTNALFTKPAQSLAPMLVVFILNRYGYQKKGSQKTLRSSGEYVALQDVMFQLMCLVPMFIAFIQIIVWRWYTL 452
BLAST of mRNA_Ecto-sp13_S_contig7314.18477.1 vs. uniprot
Match: A0A3M6TDC0_POCDA (Uncharacterized protein n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TDC0_POCDA) HSP 1 Score: 109 bits (272), Expect = 3.080e-22 Identity = 71/227 (31.28%), Postives = 116/227 (51.10%), Query Frame = 1
Query: 292 LSFWGFTKQLSSHGNFWLYVSMNFMENFNALFDQSFF-VFLDTKLFERVVPRRPHGVLTALCLYAPKLMTQVLTPVADRYGTYKLIMGAALFKLVAGVLMFTCGR-RAWPLWTLLFLGNRLAATAWGFYNLSFSDVIDEDTLRNKRPESMSVSVHGLQALFVKPAQSLAPMFGMAFLPAGALKTDLVDMTVRQAEGVQA--AAFTLMWAVPAGCGLVQVLIWRAYRL 960
L + KQ+ + +F +V+MNF + F+ F +FF +F + + V+P + +LT P+L+ + +P+ ++G+YK+I+ + KL V++F GR W L+ L + N L + +NLS SD+ID D + +R +S + G ALF KPAQSLAPM + L K + V Q A F L+ +P +VQ+++W Y L
Sbjct: 189 LPLFTLLKQILTQRSFVCFVAMNFFQVFHVTFCSNFFLIFAEHLIGPGVIPAVLYSLLTGSVFLVPRLLVLLTSPLLAKFGSYKVILWSFYVKLSLPVVVFLAGRSNIWALYFFLIIDNSLPDATFSLFNLSVSDIIDADMEKYQRNAPVSSMIFGTNALFTKPAQSLAPMMVVHILSWYGYKDTQGNSKVSSGSPGQLLDAMFFLLCIIPLIIAMVQIVVWAFYPL 415
BLAST of mRNA_Ecto-sp13_S_contig7314.18477.1 vs. uniprot
Match: UPI0009E1BEBD (transmembrane protein 180-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E1BEBD) HSP 1 Score: 105 bits (262), Expect = 9.480e-21 Identity = 68/222 (30.63%), Postives = 113/222 (50.90%), Query Frame = 1
Query: 313 KQLSSHGNFWLYVSMNFMENFNALFDQSFF-VFLDTKLFERVVPRRPHGVLTALCLYAPKLMTQVLTPVADRYGTYKLIMGAALFKLVAGVLMFTCGRR-AWPLWTLLFLGNRLAATAWGFYNLSFSDVIDEDTLRNKRPESMSVSVHGLQALFVKPAQSLAPMFGMAFLPAGALKTDLVDMTVRQAEGVQA----AAFTLMWAVPAGCGLVQVLIWRAYRL 960
KQ+ + +F +V+MNF + F+ F +FF +F + + V+P + +LT P+L+ + +P+ R G+YK+I+ + K+ +++ GR W L+ L + N L + +NLS SD+ID D + +R +S + G ALF KPAQSLAPM + L K L + + G A F L+ +P +VQ++ W+ Y L
Sbjct: 241 KQILTQRSFVCFVAMNFFQVFHTTFCSNFFLIFAEHLIGPDVIPAILYSLLTGSVFLLPRLLVLLTSPLLARLGSYKVILWSFYIKVSLPAIVYFAGRNNIWILYFFLIIDNSLPDATFSLFNLSVSDIIDHDMEKYQRNAPVSSMIFGTNALFTKPAQSLAPMMVVHILSWYGYKETLGVNKDKASSGTSPQLLDAMFFLLCLIPLVIAIVQIVFWKLYPL 462
BLAST of mRNA_Ecto-sp13_S_contig7314.18477.1 vs. uniprot
Match: A0A7M7HE62_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7HE62_STRPU) HSP 1 Score: 104 bits (259), Expect = 2.280e-20 Identity = 69/223 (30.94%), Postives = 117/223 (52.47%), Query Frame = 1
Query: 313 KQLSSHGNFWLYVSMNFMENFNALFDQSFFVFLDTKLF-ERVVPRRPHGVLTALCLYAPKLMTQVLTPVADRYGTYKLIMGAALFKLVAGVLMFTCGRRAWPLWTLLFLGNR-LAATAWGFYNLSFSDVIDEDTLRNKRPESMSVSVHGLQALFVKPAQSLAPMFGMAFLPAGALKTDLVD--MTVRQAEGVQAAAFTLMWAVPAGCGLVQVLIWRAYRLHGA 969
KQ+ + NF ++V +NF + F+ F +F T+L E + + + P+L+ L+ RYG+Y++I+ + FK+ + LMF G + + L F+ +R L + F+NL SD+IDED L+++R +S SV G ALF KPA SLAPM ++ L K +L D +++ ++ F L +P G +Q+++WR Y + +
Sbjct: 243 KQIICNRNFLIFVFINFCQIFHMDFGANFLAIFVTQLIPEADLSQFFRKAMFGTTFIFPQLLVLFLSIFVSRYGSYRIIIWSFYFKICSAFLMFLIGAQHTHIMVLFFVMDRSLPEAIFSFFNLCLSDIIDEDQLKSQRASPLSSSVFGYNALFTKPASSLAPMMVVSILNKYGYK-ELQDEKLSLHDTTQLKGTMFILACFIPIIVGSLQLMVWRNYSIRSS 464
BLAST of mRNA_Ecto-sp13_S_contig7314.18477.1 vs. uniprot
Match: UPI001BB1786D (transmembrane protein 180-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB1786D) HSP 1 Score: 104 bits (259), Expect = 3.140e-20 Identity = 70/229 (30.57%), Postives = 118/229 (51.53%), Query Frame = 1
Query: 313 KQLSSHGNFWLYVSMNFMENFNALFDQSFFVFLDTKLF-ERVVPRRPHGVLTALCLYAPKLMTQVLTPVADRYGTYKLIMGAALFKLVAGVLMFTCGRRAWPLWTLLFLGNR-LAATAWGFYNLSFSDVIDEDTLRNKRPESMSVSVHGLQALFVKPAQSLAPMFGMAFLPAGALKTDLVD--MTVRQAEGVQAAAFTLMWAVPAGCGLVQVLIWRAYRLHGAALKDMK 987
KQ+ + NF ++V +NF + F+ + +F T+L E + + L P+ + +L+ RYG Y++I+ + FK+ + + MF G + + F+ +R L + F+NL SD+IDED LRNKR +S SV G ALF KPA SLAPM + L + + +L D ++++ ++ F L +P G +Q+L+WR Y + + + K
Sbjct: 297 KQIIFNRNFLIFVFINFCQIFHMNYGANFLAVFVTQLIPETDLSQFIRKALFGTTFILPQFLVLLLSIFVTRYGYYRIIVWSFYFKICSAIFMFLIGAQHTHIMVFFFIMDRSLPDAIFSFFNLCLSDIIDEDQLRNKRSSPLSSSVFGYNALFTKPASSLAPMMVVNILNRYSYQ-ELQDEKLSLQHTTELKGTMFILACFIPIIIGSLQLLVWRNYTIRSSHISVAK 524
BLAST of mRNA_Ecto-sp13_S_contig7314.18477.1 vs. uniprot
Match: UPI000779F96B (transmembrane protein 180-like n=3 Tax=Acropora TaxID=6127 RepID=UPI000779F96B) HSP 1 Score: 103 bits (257), Expect = 4.080e-20 Identity = 66/231 (28.57%), Postives = 117/231 (50.65%), Query Frame = 1
Query: 289 ELSFWGFTKQLSSHGNFWLYVSMNFMENFNALFDQSFF-VFLDTKLFERVVPRRPHGVLTALCLYAPKLMTQVLTPVADRYGTYKLIMGAALFKLVAGVLMFTCG-RRAWPLWTLLFLGNRLAATAWGFYNLSFSDVIDEDTLRNKRPESMSVSVHGLQALFVKPAQSLAPMFGMAFLPAGALKTDLVD-----MTVRQAEGVQAAAFTLMWAVPAGCGLVQVLIWRAYRL 960
E+ + KQ+ + +F +V+MNF + F+ F +FF +F++ + +P + +LT P+++ +P+ ++G+YK+I+ + K+ L+F G W L+ L + N L + +NLS SD+ID+D + R +S + G ALF KPAQSLAPM + L K ++V ++ ++ A F L+ VP + Q++ W+ Y L
Sbjct: 228 EVPLFTLIKQILTQRSFVCFVAMNFFQVFHTTFCSNFFLIFVEHLIGSDAIPAILYSLLTGSVFILPRILVLATSPLLAKFGSYKVILWSFYVKVSLPALVFLAGLNNIWILYIFLIVDNCLPDATFSLFNLSVSDIIDDDMEKYHRNAPISSMIFGTNALFTKPAQSLAPMMVVHILSRYGYKDSQQTGKGEIVSVIASQQLKDAMFCLLCMVPLVVAVFQIIFWKFYPL 458
BLAST of mRNA_Ecto-sp13_S_contig7314.18477.1 vs. uniprot
Match: A0A8J9ZSW4_BRALA (MFSD13A protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9ZSW4_BRALA) HSP 1 Score: 101 bits (252), Expect = 1.870e-19 Identity = 65/238 (27.31%), Postives = 119/238 (50.00%), Query Frame = 1
Query: 286 RELSFWGFTKQLSSHGNFWLYVSMNFMENFNALFDQSF-FVFLDTKLFERVVPRRPHGVLTALCLYAPKLMTQVLTPVADRYGTYKLIMGAALFKLVAGVLMFTCGRRAWPLWTLLFLGNRLAATAWGFYNLSFSDVIDEDTLRNKRPESMSVSVHGLQALFVKPAQSLAPMFGMAFLPAGALKTDLVDMTVR---------QAEGVQAAAFTLMWAVPAGCGLVQVLIWRAYRLHGA 969
R S W + ++ + +F L+V+MNF++ F+ F SF +F D L + ++ +L P++ +L+PV +R G+Y++I+G+ +LV M+ G + W + L + + + +N+S SD+ID D+ + R +S G+ ALF KPAQSLAPM + L + +LV T + + ++ F + +PA +Q+L+W+ + L +
Sbjct: 232 RSSSIWKLSWEIVTQKDFILFVTMNFLQIFHMTFLISFAMIFADNLLPKDMLSSLTRSLLYGSGFVIPQIAALLLSPVVERVGSYRVILGSFYLELVCAAGMYLAGPQPWLIVGYLLVDISIPGAIFSLFNISVSDIIDADSAKYARKTPLSSMFFGMNALFTKPAQSLAPMLVVTVLNRYGYE-ELVRSTAAPITAPGHDDEHDELRRVMFQIFCLLPATVAFLQILVWKPFGLRNS 468 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7314.18477.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7314.18477.1 >prot_Ecto-sp13_S_contig7314.18477.1 ID=prot_Ecto-sp13_S_contig7314.18477.1|Name=mRNA_Ecto-sp13_S_contig7314.18477.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=311bp MRSRTPTRDSGPAGSAGGEGEAAAVAAERGGSQLGNAPLSPKTTAGGAGAback to top mRNA from alignment at Ecto-sp13_S_contig7314:281..5441+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7314.18477.1 ID=mRNA_Ecto-sp13_S_contig7314.18477.1|Name=mRNA_Ecto-sp13_S_contig7314.18477.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5161bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7314:281..5441+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7314:281..5441+ >mRNA_Ecto-sp13_S_contig7314.18477.1 ID=mRNA_Ecto-sp13_S_contig7314.18477.1|Name=mRNA_Ecto-sp13_S_contig7314.18477.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=933bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7314:281..5441+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |