mRNA_Ecto-sp13_S_contig73099.18471.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig73099.18471.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 399 bits (1026), Expect = 5.650e-135 Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 1
Query: 1 DLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKPASDPVQTQPAPLGGGQGASKRPRMSAFEAAAAXXXXXXXXXXXXXXADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGD 672
DLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKPASDPVQTQPAPLGGGQGASKRPRMSAFEAAAAXXXXXXXXXXXXX ADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGD
Sbjct: 253 DLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKPASDPVQTQPAPLGGGQGASKRPRMSAFEAAAAXXXXXXXXXXXXXSADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGD 476
BLAST of mRNA_Ecto-sp13_S_contig73099.18471.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 250 bits (639), Expect = 5.100e-77 Identity = 136/216 (62.96%), Postives = 160/216 (74.07%), Query Frame = 1
Query: 1 DLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKPASDPVQTQP-APLGGGQGASKRPRMSAFEAAAAXXXXXXXXXXXXXXADEKREQLVAIVDMEVSAFKAAPGIRVW 645
DLEGA+YVTGSMT+ K+ ELR GLEAAI DL+A + G+ +T++AMEAV PDAEAL DF NRWGDGS+ILEYREGKRRQPQGFK +QV ATA+DPRAKHLYGI+Q EHA VWRAVA+ AVDIA K + D S PA+ PV T P AP GGQGA KR R+SAFEAAAA DEKREQL ++VD+EV++F+ PGI +W
Sbjct: 289 DLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAEKFSSDNTATSGSAPAAQPVGTPPVAP--GGQGAPKRARLSAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIW 502
BLAST of mRNA_Ecto-sp13_S_contig73099.18471.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 107 bits (268), Expect = 6.170e-24 Identity = 63/150 (42.00%), Postives = 94/150 (62.67%), Query Frame = 1
Query: 4 LEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKPASDPVQTQPA 453
LE ++ VT S+ +A+LR+ L+ AI L+A + + +A + + A AL D + RW DG+++L Y EG RRQP+GFK+KQV ATALDPR+K LYGI++ EH+ VW AVA+ AV +A+ A + ++ S P+ +PA
Sbjct: 191 LEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPA-ESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSAGAS--SSPIPVEPA 337
BLAST of mRNA_Ecto-sp13_S_contig73099.18471.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 1.110e-19 Identity = 54/125 (43.20%), Postives = 83/125 (66.40%), Query Frame = 1
Query: 4 LEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIAL 378
LE ++ VT + +A+L++GL+ A+ L+A + + +A + V A+AL D + RWGD +++L Y EG RRQP+GFK++QV ATAL PR+K LYGI++ EH+ VW A A+ AV +A+
Sbjct: 219 LEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPA-ESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAI 342
BLAST of mRNA_Ecto-sp13_S_contig73099.18471.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 1.980e-19 Identity = 57/119 (47.90%), Postives = 70/119 (58.82%), Query Frame = 1
Query: 22 VTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIAL 378
VTGS+ + + +LR LE AI DL + A AV P +AL D+ +RWGDG NIL Y+EG RRQP GFK V ATALDPR K YG+ + E A VW+ V AV IA+
Sbjct: 198 VTGSLVVPFIYDLRNSLEDAIDDLVELPPDS-DANVNTAWAAVMPCIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEAVKIAV 315
BLAST of mRNA_Ecto-sp13_S_contig73099.18471.1 vs. uniprot
Match: A0A6H5JVE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE5_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 5.320e-17 Identity = 44/72 (61.11%), Postives = 50/72 (69.44%), Query Frame = 1
Query: 136 AMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAV 351
A AV P +AL DF NRWGDG NIL Y+EG RRQP GFK QV ATALDPR K L+G+ + E A VW+ V
Sbjct: 158 ARAAVMPCIKALRDDFINRWGDGRNILNYKEGPRRQPAGFKPVQVLATALDPRTKILHGVDEDEKADVWKLV 229
BLAST of mRNA_Ecto-sp13_S_contig73099.18471.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 6.820e-17 Identity = 43/67 (64.18%), Postives = 49/67 (73.13%), Query Frame = 1
Query: 178 DFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIAL 378
DF NRWGDG NIL Y+EG+RRQP GFK QV ATALDPR K LYG+ + E A VW+ V AV IA+
Sbjct: 50 DFINRWGDGRNILIYKEGRRRQPGGFKPVQVLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAV 116
BLAST of mRNA_Ecto-sp13_S_contig73099.18471.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 68.2 bits (165), Expect = 1.020e-9 Identity = 47/124 (37.90%), Postives = 71/124 (57.26%), Query Frame = 1
Query: 7 EGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIAL 378
E ++ VT S+ I +A+LR+ L+ A+ L+A A E++ +A+ + S I+E P+GFK+KQV ATALDPR+K LYGI++ EH+ VW AVA+ AV +A+
Sbjct: 264 EASKDVTVSLVIPYIADLRDELDEAVERLQAHACPA---------ESIVAEAKKDVFFAPKHVRPTSVIVE--------PRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAI 370 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig73099.18471.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig73099.18471.1 >prot_Ecto-sp13_S_contig73099.18471.1 ID=prot_Ecto-sp13_S_contig73099.18471.1|Name=mRNA_Ecto-sp13_S_contig73099.18471.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=224bp DLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVback to top mRNA from alignment at Ecto-sp13_S_contig73099:1..672+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig73099.18471.1 ID=mRNA_Ecto-sp13_S_contig73099.18471.1|Name=mRNA_Ecto-sp13_S_contig73099.18471.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=672bp|location=Sequence derived from alignment at Ecto-sp13_S_contig73099:1..672+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig73099:1..672+ >mRNA_Ecto-sp13_S_contig73099.18471.1 ID=mRNA_Ecto-sp13_S_contig73099.18471.1|Name=mRNA_Ecto-sp13_S_contig73099.18471.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=672bp|location=Sequence derived from alignment at Ecto-sp13_S_contig73099:1..672+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |