mRNA_Ecto-sp13_S_contig7274.18422.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7274.18422.1 vs. uniprot
Match: D7FP08_ECTSI (C-CAP/cofactor C-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP08_ECTSI) HSP 1 Score: 459 bits (1180), Expect = 7.030e-160 Identity = 231/236 (97.88%), Postives = 232/236 (98.31%), Query Frame = 1
Query: 7 VRVEECERMQLVTCCRRLTVTNSLECIFPVFVATPPVLCGDNRACQFAPYNSCYPRHKAHLQRAGLLGEEEDEVPANLWGNPVEASMMGMPSMAAGTPTSLASRAKSRSPGGAKGGLGGLGHDLSPAIMPPEQFYTLAVPVPPDNAGDPPAENPFGLPSEYAAVLQEREAAVEGLHQAIVDADLTPRQNRELEECIRGRFTEWLVATGNLRQVLDLVSVAEKARSTGNAAAAVTVS 714
VRVEECERMQLVTCCRRLTVTNSLECIFPVFVATPPVLCGDNRACQFAPYNSCYPRHKAHLQRAGLLGEEEDEVPANLWGNPVEASMMGMPSMAAGTPTS ASRAKSRSPGGAKGGLGGLGHDLSPAIMPPEQFYTLAVPVPPD+AGDPPAENPFGLPSEYAAVLQEREAAVEGLHQAIVDADLTPRQNRELEECIRGRFTEWLVATGNLRQVLDLVSVAEKARSTGNA AAV S
Sbjct: 159 VRVEECERMQLVTCCRRLTVTNSLECIFPVFVATPPVLCGDNRACQFAPYNSCYPRHKAHLQRAGLLGEEEDEVPANLWGNPVEASMMGMPSMAAGTPTSSASRAKSRSPGGAKGGLGGLGHDLSPAIMPPEQFYTLAVPVPPDSAGDPPAENPFGLPSEYAAVLQEREAAVEGLHQAIVDADLTPRQNRELEECIRGRFTEWLVATGNLRQVLDLVSVAEKARSTGNATAAVAAS 394
BLAST of mRNA_Ecto-sp13_S_contig7274.18422.1 vs. uniprot
Match: A0A4D9CT44_9STRA (C-CAP/cofactor C-like domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CT44_9STRA) HSP 1 Score: 149 bits (375), Expect = 4.370e-37 Identity = 97/242 (40.08%), Postives = 130/242 (53.72%), Query Frame = 1
Query: 7 VRVEECERMQLVTCCRRLTVTNSLECIFPVFVATPPVLCGDNRACQFAPYNSCYPRHKAHLQRAGLLGEEEDEVPANLWGNPVEASMMGMPSMAAGTPTSLASRAKSRSPG------GAKGGLGGLGHDLSPA---IMPPEQFYTLAVPVPPDNA------------GDPPA--ENPFGLPSEYAAVLQEREAAVEGLHQAIVDADLTPRQNRELEECIRGRFTEWLVATGNLRQVLDLVSV 663
VRV CER+ LV RRL V N L+ FPV++ P VL GDNR C+ APYN+CYP L+ AG GE P N W +P++ + G + A G L + G G GL G + I+PPEQFYTL++PVPP ++ G PP NPF LP EYA+VL+ER ++ L Q ++ + L+ Q +E + +F EWL A+GNLRQVLDL+ +
Sbjct: 601 VRVSNCERLTLVCAARRLVVCNCLDSTFPVYLLRPAVLVGDNRGCRLAPYNTCYPSLPLDLRTAGF-GELGSTQPRNQWDSPIDLTA-GAHNGAGGGEGGLGLTREGSHGGKGDRDNGRNAGLAGQEGARAGGESRILPPEQFYTLSIPVPPSSSPGLPGQGPMPPEGSPPTLLYNPFPLPPEYASVLRERSVGLDRLQQTVIGS-LSDEQRPGVEAALVSKFYEWLAASGNLRQVLDLIQL 839
BLAST of mRNA_Ecto-sp13_S_contig7274.18422.1 vs. uniprot
Match: A0A835Z1R1_9STRA (Tubulin binding cofactor C-domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1R1_9STRA) HSP 1 Score: 141 bits (356), Expect = 9.980e-35 Identity = 91/247 (36.84%), Postives = 125/247 (50.61%), Query Frame = 1
Query: 7 VRVEECERMQLVTCCRRLTVTNSLECIFPVFVATPPVLCGDNRACQFAPYNSCYPRHKAHLQRAGLL-----------GEEEDEVPANLWGNPVEASMMGMPSMAAGTPTSLASRAKSRSPGGA-KGGLGGLGHDLSPAIMPPEQFYTLAVPVPPDNAGDPP------------------AENPFGLPSEYAAVLQEREAAVEGLHQAIVDADLTPRQNRELEECIRGRFTEWLVATGNLRQVLDLV 657
VR+E+C R+ L+ CRR N EC ++ + P+ GDNRACQ APYN+ YPR +AHL GLL N+W +P++ + A ++ + GA + L + MPP+ F+ +++P GD A NPF LP EYA L+EREA ++ L Q + A L+PRQ RELEE +RGRFTEWLV++G+LRQVLDLV
Sbjct: 406 VRLEDCTRVTLIAACRRACAVNCCECALHLYAPSRPLFVGDNRACQVAPYNAAYPRLRAHLAACGLLPPLPXXXXXXXXXXXXXXXRNMWFSPLDLNAAPTVXXXXXXXXXXALTPRTAAKAGADEAHPHALASASAVTQMPPDAFHCVSIPA--CAGGDEXXXXXXXXXXXXXXREATQALNPFPLPPEYANKLREREALLQQLQQVVQGAQLSPRQQRELEEAVRGRFTEWLVSSGHLRQVLDLV 650
BLAST of mRNA_Ecto-sp13_S_contig7274.18422.1 vs. uniprot
Match: A0A7S3BWF8_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BWF8_9VIRI) HSP 1 Score: 115 bits (287), Expect = 4.430e-26 Identity = 77/224 (34.38%), Postives = 106/224 (47.32%), Query Frame = 1
Query: 10 RVEECERMQLVTCCRRLTVTNSLECIFPVFVATPPVLCGDNRACQFAPYNSCYPRHKAHLQRAGLLGEEEDEVPANLWGNPVEASMMGMPSMAAGTPTSLASRAKSRSPGGAKGGLGGLGHDLSPAIMPPEQFYTLAVPVPPDNAGDPPAE---------NPFGLPSEYAAVLQEREAAVEGLHQAIVDADLTPRQNRELEECIRGRFTEWLVATGNLRQVLDL 654
R+E CER QL+ CCRRL V+N +C + TPPV GDNR AP+N+ YP +AHL+ G+ + N W G + + PG A+ + MPP +F VPV + G A NPF LP EYAA L+ + +V L A+ DA L+ + REL+ I+ F +WL+ +GN+RQV DL
Sbjct: 206 RLERCERTQLLVCCRRLVVSNCHDCTLYLATNTPPVFVGDNRNVVVAPFNTYYPSLRAHLEAVGV------DPSVNRWDTVALLEEEG---------ELVRAEVGHAGPGAAQAAV---------HAMPPNKFVPFIVPVVENGPGGAAANADASTQTHTNPFVLPPEYAAALEAKVRSVAQLRGAVKDAALSDARRRELQGVIQAHFKDWLLHSGNMRQVFDL 405
BLAST of mRNA_Ecto-sp13_S_contig7274.18422.1 vs. uniprot
Match: A0A7S0NAY6_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0NAY6_9CHLO) HSP 1 Score: 106 bits (264), Expect = 9.520e-24 Identity = 74/222 (33.33%), Postives = 113/222 (50.90%), Query Frame = 1
Query: 7 VRVEECERMQLVTCCRRLTVTNSLECIFPVFVATPPVLCGDNRACQFAPYNSCYPRHKAHLQRAGLLGEEEDEVPANLWGNPVEASMMGMPSMAAGTPTSLASRAKSRSPGGAKGGLGGLGHDLSPAIMPPEQFYTLAVP---VPP---DNAGDPPAENPFGLPSEYAAVLQEREAAVEGLHQAIVDADLTPRQNRELEECIRGRFTEWLVATGNLRQVLDL 654
++V+ CER+ LV+ RRL V++ + F + V PPV+ GD R Q APYN+ Y R AHL+ A + N W PV + + T +S ++ + SP A + A++PPE+F +P PP D NPF +P +Y+A L+++ AVE + + + +A L R+L+ I+ F EWLV +GN+RQV DL
Sbjct: 65 LKVDLCERVHLVSASRRLRVSSCRDSTFCIAVNHPPVVMGDCRNLQLAPYNTYYERLDAHLRVANV------RTAPNRWDAPVSLTSK----LHTDTSSSPSTSNPTSSPDSASRVV---------ALLPPEKFLPFMIPFRGAPPSAEDQLRPSTTANPFTMPQQYSAALEQKVQAVEDMRKNVKEAGLDGANKRDLQTVIQAYFKEWLVVSGNMRQVYDL 267
BLAST of mRNA_Ecto-sp13_S_contig7274.18422.1 vs. uniprot
Match: A0A8K1Y6G7_9CHLO (Probable TBCC domain-containing protein 1 at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8K1Y6G7_9CHLO) HSP 1 Score: 110 bits (274), Expect = 1.090e-23 Identity = 85/263 (32.32%), Postives = 123/263 (46.77%), Query Frame = 1
Query: 7 VRVEECERMQLVTCCRRLTVTNSLECIFPVFVATPPVLCGDNRACQFAPYNSCYPRHKAHLQRAGLLGEEEDEVPANLWGNPVEASMMGMPSMA-AGTPTSLASRAK------------------SRSPGGAKGGLGGLGHDLSPAIMPPEQFYTLAVPVPPDNAGDPPAENPFGLPSEYAAVLQEREAAVEGLHQAIVDADLTPRQNRELEECIRGRFTEWLVATGNLRQVLDLVSVAEKARSTGNAAAAVTVSALAEQATT 738
++VE CER+QLV RL++ + +C+F + V PP+L GDNR Q APYN+ Y R H+ +AG+ E NLW PV P+ + T TS A +A+ PG GG G A + F LA P A +PF LP+ Y + + +AV L A+ A L + REL+ I+ F +WL+ +GN+RQV DL + + STG AA ++++ A T
Sbjct: 419 LKVERCERVQLVASAVRLSIASCHDCVFYLGVNRPPLLLGDNRFLQMAPYNTQYERLPVHMAKAGVTAEP------NLWDRPVSLGREHRPATPDSDTATSAAGKARMPFTLLPPDKLLPLMVPFKGGPGPLCGGAASGGGSRMSADV--GSFVGLAESG--GGGSGPLAPSPFRLPAVYEEAKERKVSAVSDLRNAVKAAALDDAKKRELQAVIQSYFKDWLMTSGNMRQVYDLARMEREEASTGTPAAQENSNSMSADAPT 671
BLAST of mRNA_Ecto-sp13_S_contig7274.18422.1 vs. uniprot
Match: A0A448ZKV8_9STRA (TBCC domain-containing protein 1 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKV8_9STRA) HSP 1 Score: 108 bits (271), Expect = 2.950e-23 Identity = 87/275 (31.64%), Postives = 126/275 (45.82%), Query Frame = 1
Query: 7 VRVEECERMQLVTCCRRLTVTNSLECIFPVFVATPPVLCGDNRACQFAPYNSCYPRHKAHLQRAGLLG-----------------EEEDEVP-----ANLWGNPVEASMMGMPSMAA------GTPTSLASRAKSRSPGGAKGGLGGLGHDLSPAIMPPEQFYTLAVPVPPDNA----------------GDPPAE--------------NPFGLPSEYAAVLQEREAAVEGLHQAIVDADLTPRQNRELEECIRGRFTEWLVATGNLRQVLDLV 657
V V +CER ++ T RR+ ++NS + I VF TPP+L GDNR+CQFAPYN+ Y + L GL E E P +N W PVE S + +P +A G+P++ R+P G +G +P ++P +F+ L VP+ ++A G+ P+ +PF LP EY + + + QAI + +Q + EE RG F +WLVA+GNLRQVLDLV
Sbjct: 521 VHVVDCERTKVTTASRRILLSNSCDTIMNVFTPTPPLLVGDNRSCQFAPYNTYYEGLREDLLATGLAAAAVPADNQSQFHGSRSLENEGAWPPLQCASNKWKQPVEISKLEIPQVAGSNSPPPGSPSNSVGADDKRAPNSNAGTIGDTSVQ-TPILLPASEFHVLFVPIESESARQRRSEQESHEAGGGTGEQPSNESKYCRALAEVLQFSPFRLPIEYERRALVKADRMRNIQQAIRKSVPEDKQKQFEEELNRG-FRDWLVASGNLRQVLDLV 793
BLAST of mRNA_Ecto-sp13_S_contig7274.18422.1 vs. uniprot
Match: A0A061S8L0_9CHLO (TBCC domain-containing protein 1 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S8L0_9CHLO) HSP 1 Score: 103 bits (256), Expect = 2.430e-21 Identity = 81/236 (34.32%), Postives = 109/236 (46.19%), Query Frame = 1
Query: 7 VRVEECERMQLVTCCRRLTVTNSLECIFPVFVATPPVLCGDNRACQFAPYNSCYPRHKAHLQRAGLLGEEEDEVPANLWGNPVEAS--MMGM-------PSMAAG---TPTSLASRAKSRSPGGA--------KGGLGGLGHDLSPAIMPPEQFYTLAVPVPPDNAGDPPAENPFGLPSEYAAVLQEREAAVEGLHQAIVDADLTPRQNRELEECIRGRFTEWLVATGNLRQVLDL 654
VR+E CE++QL CRR ++ +C + V PP L GDNR Q APY + Y AHL AG+ AN+W +P+ + M G P+MA G T S+ SR P KGG G LG + A P T + N F LP EY A L+++ AV L + A L + R+L+ I+ F EWLVA+GN+RQ+ DL
Sbjct: 369 VRIERCEKLQLFVACRRAMISTCHDCTXHLAVNRPPCLIGDNRFIQLAPYCTHYEELPAHLNAAGVT------TGANMWDHPIXVTRDMRGHAPDSPRGPAMATGPHSTSDSMLINQWSRMPPRKLLPFVIPFKGGKGPLGGGGAXAPGTPSTGNTAGL------------GNLFPLPEEYDAALKKKVEAVADLRSEVKSAVLEEPRKRDLQAVIQAHFKEWLVASGNMRQIYDL 586
BLAST of mRNA_Ecto-sp13_S_contig7274.18422.1 vs. uniprot
Match: I0Z7X8_COCSC (TBCC domain-containing protein 1 n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z7X8_COCSC) HSP 1 Score: 102 bits (253), Expect = 5.870e-21 Identity = 76/235 (32.34%), Postives = 109/235 (46.38%), Query Frame = 1
Query: 7 VRVEECERMQLVTCCRRLTVTNSLECIFPVFVATPPVLCGDNRACQFAPYNSCYPRHKAHLQRAGLLGEEEDEVPANLWGNPVEASMMGMPSMA-AGTPTSLASRAK------------------SRSPGGAKGGLGGLGHDLSPAIMPPEQFYTLAVPVPPDNAGDPPAENPFGLPSEYAAVLQEREAAVEGLHQAIVDADLTPRQNRELEECIRGRFTEWLVATGNLRQVLDL 654
++VE CER+QLV RL++ + +C+F + V PP+L GDNR Q APYN+ Y R H+ +AG+ E NLW PV P+ + + TS A +A+ PG GG G A + F L P A +PF LP+ Y + + +AV L A+ A L + REL+ I+ F +WL+ +GN+RQV DL
Sbjct: 318 LKVERCERVQLVASAVRLSIASCHDCVFYLGVNRPPLLLGDNRFLQMAPYNTQYERLPVHMAKAGVTAEP------NLWDRPVSLGREHRPATPDSDSATSAAGKARMPFTLLPPDKLLPLMVPFKGGPGPLCGGAASSGGSRMSADV--GSFVGLGDSG--QGGSGPLAPSPFRLPAVYEEAKERKVSAVSDLRNAVKAASLDDGKKRELQAVIQSYFKDWLMTSGNMRQVYDL 542
BLAST of mRNA_Ecto-sp13_S_contig7274.18422.1 vs. uniprot
Match: B7GDS5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GDS5_PHATC) HSP 1 Score: 99.4 bits (246), Expect = 5.990e-20 Identity = 83/273 (30.40%), Postives = 124/273 (45.42%), Query Frame = 1
Query: 13 VEECERMQLVTCCRRLTVTNSLECIFPVFVATPPVLCGDNRACQFAPYNSCYPRHKAHLQRAGLLGE--EEDEVP----------------------ANLWGNPVEASMMGMPSMAAGTP----TSLASRAKSRSPGGAKGGLGGLGHDLS---PAIMPPEQFYTLAVPVPPD---------NAGDPPAE------------------NPFGLPSEYAAVLQEREAAVEGLHQAIVDADLTPRQNRELEECIRGRFTEWLVATGNLRQVLDLV 657
+ +CE+ + + RRL V+NS + VF +PP+L GDNR+CQFAPYN+ Y + L GL E + P +N W +PVE + + MP + P TS+ A + + A G G G+D S P ++P +F+ L VP+ D + D +E +PF LP EY + + ++ + Q+ V +LT Q + EE + F +WLV +GNLRQVLDLV
Sbjct: 527 IVDCEKTSITSAARRLLVSNSSDVQMCVFTPSPPLLVGDNRSCQFAPYNTYYDGFREDLLATGLAAAVVPEHQSPYHGSGGRNYTDTDGSWPPLQCASNKWKHPVELARLEMPQIPPTPPGPSNTSIGGVASAGADDKAMG-KSGTGNDTSVHAPVLVPASEFHILFVPIESDASKQRRLEADENDHSSEPGRLESQYCRLLSELLQTSPFRLPMEYERRVLMKVDRMKTIQQS-VQKNLTTEQQAKFEEELNRGFRDWLVTSGNLRQVLDLV 797 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7274.18422.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7274.18422.1 >prot_Ecto-sp13_S_contig7274.18422.1 ID=prot_Ecto-sp13_S_contig7274.18422.1|Name=mRNA_Ecto-sp13_S_contig7274.18422.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=260bp MQVRVEECERMQLVTCCRRLTVTNSLECIFPVFVATPPVLCGDNRACQFAback to top mRNA from alignment at Ecto-sp13_S_contig7274:3619..7567- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7274.18422.1 ID=mRNA_Ecto-sp13_S_contig7274.18422.1|Name=mRNA_Ecto-sp13_S_contig7274.18422.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3949bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7274:3619..7567- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7274:3619..7567- >mRNA_Ecto-sp13_S_contig7274.18422.1 ID=mRNA_Ecto-sp13_S_contig7274.18422.1|Name=mRNA_Ecto-sp13_S_contig7274.18422.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=780bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7274:3619..7567- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |