mRNA_Ecto-sp13_S_contig7272.18421.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7272.18421.1 vs. uniprot
Match: A0A6H5L245_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L245_9PHAE) HSP 1 Score: 321 bits (823), Expect = 5.420e-103 Identity = 152/162 (93.83%), Postives = 157/162 (96.91%), Query Frame = 3
Query: 3 RATKGRKQCNGRPPCELCNTHTEPWCNPRVYLGEVLYNAHVGKSVYAMQLRRWFNAFGRENFKVVFTEDLEEEPVKTLEEVLDFIGLDMVDPQGDKGLRSLEMWSDIVGARFNTADRAKKKVLDSQVTPEMREEMRAFFAPYNKDLEDLLAVPLPSSWRVQR 488
R TKGRKQCNGRPPCELCNTHTEPWCNPRVYLGE+LYNAHVGKSVYAMQLRRWFNAFG ENFKVVFTEDLEEEP+KTLEEVLDFIGLDMVDPQGDKGLR+LEMWS+IVGARFNTAD AKKKVLDSQVTPEMREEMRAFFAPYN+DLEDLL VPLPSSW VQR
Sbjct: 80 RVTKGRKQCNGRPPCELCNTHTEPWCNPRVYLGEILYNAHVGKSVYAMQLRRWFNAFGSENFKVVFTEDLEEEPIKTLEEVLDFIGLDMVDPQGDKGLRNLEMWSEIVGARFNTADGAKKKVLDSQVTPEMREEMRAFFAPYNRDLEDLLGVPLPSSWHVQR 241
BLAST of mRNA_Ecto-sp13_S_contig7272.18421.1 vs. uniprot
Match: D7FHD4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD4_ECTSI) HSP 1 Score: 328 bits (841), Expect = 2.240e-100 Identity = 157/162 (96.91%), Postives = 159/162 (98.15%), Query Frame = 3
Query: 3 RATKGRKQCNGRPPCELCNTHTEPWCNPRVYLGEVLYNAHVGKSVYAMQLRRWFNAFGRENFKVVFTEDLEEEPVKTLEEVLDFIGLDMVDPQGDKGLRSLEMWSDIVGARFNTADRAKKKVLDSQVTPEMREEMRAFFAPYNKDLEDLLAVPLPSSWRVQR 488
RATKGRKQCNGRPPCELCNTHTEPWCNPRVYLGEVLYNAHVGKSVYAMQLRRWFNAFGRENFKVVFT+DLEEEP+KTLEEVLDFIGLDMVDPQGDKGLRSLEMWSDIVGARFNTAD AKKKVLDSQVTPEMREEMRAFFAPYNKDLEDLL VPLPSSW VQR
Sbjct: 477 RATKGRKQCNGRPPCELCNTHTEPWCNPRVYLGEVLYNAHVGKSVYAMQLRRWFNAFGRENFKVVFTDDLEEEPIKTLEEVLDFIGLDMVDPQGDKGLRSLEMWSDIVGARFNTADGAKKKVLDSQVTPEMREEMRAFFAPYNKDLEDLLGVPLPSSWHVQR 638
BLAST of mRNA_Ecto-sp13_S_contig7272.18421.1 vs. uniprot
Match: A0A6H5JZE4_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZE4_9PHAE) HSP 1 Score: 144 bits (363), Expect = 1.080e-33 Identity = 67/134 (50.00%), Postives = 95/134 (70.90%), Query Frame = 3
Query: 78 CNPRVYLGEVLYNAHVGKSVYAMQLRRWFNAFGRENFKVVFTEDLEEEPVKTLEEVLDFIGLDMVDP-QGDKGLRSLEMWSDIVGARFNTADRAKKKVLDSQVTPEMREEMRAFFAPYNKDLEDLLAVPLPSSW 476
CNP +L ++ +HVGKS+Y++QL RW + FGREN KVVF E++ +P+ T+ V DF+G+D++D +G KGLRS W +IV + N ++ KKK+LD QVTPE+ + MR FFAP+N LE+LL PLP +W
Sbjct: 309 CNPHAFLEHNMFFSHVGKSIYSLQLERWLDLFGRENVKVVFLEEMAVDPMGTIASVFDFLGVDLLDEKEGVKGLRSRTEWEEIVRTKHNLTNQRKKKILDEQVTPEILQSMRDFFAPFNTQLEELLGRPLPDNW 442
BLAST of mRNA_Ecto-sp13_S_contig7272.18421.1 vs. uniprot
Match: D8LLL8_ECTSI (Sulfotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLL8_ECTSI) HSP 1 Score: 141 bits (355), Expect = 2.090e-32 Identity = 67/133 (50.38%), Postives = 90/133 (67.67%), Query Frame = 3
Query: 78 CNPRVYLGEVLYNAHVGKSVYAMQLRRWFNAFGRENFKVVFTEDLEEEPVKTLEEVLDFIGLDMVDPQGDKGLRSLEMWSDIVGARFNTADRAKKKVLDSQVTPEMREEMRAFFAPYNKDLEDLLAVPLPSSW 476
CNPR +L LY +HVGKS+YA+QL RWF+ FGRENFKVVFT+D+ +PV LE+VL F+GL++ KGL ++ W I G +N KK L QVT E++E +R FF P+N+ LE++L PLP +W
Sbjct: 351 CNPRKFLEVPLYVSHVGKSMYALQLERWFDLFGRENFKVVFTDDMAVDPVGVLEDVLHFLGLELTSEDESKGLPDMKGWKKITGMAYNKTKSKKKDELGDQVTDEVKEGLRKFFEPHNEALEEILGQPLPEAW 483
BLAST of mRNA_Ecto-sp13_S_contig7272.18421.1 vs. uniprot
Match: D7G7A7_ECTSI (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A7_ECTSI) HSP 1 Score: 131 bits (329), Expect = 3.420e-30 Identity = 65/135 (48.15%), Postives = 86/135 (63.70%), Query Frame = 3
Query: 78 CNPRVYLG--EVLYNAHVGKSVYAMQLRRWFNAFGRENFKVVFTEDLEEEPVKTLEEVLDFIGLDMVDPQGDKGLRSLEMWSDIVGARFNTADRAKKKVLDSQVTPEMREEMRAFFAPYNKDLEDLLAVPLPSSW 476
C R +LG + LY AHV K +YA QL RWF GREN KV F E+ +PV L + +FIGLD++D +G+KGL + E W +V N D +K +LD QVTPE+ + MR FFA +N +LE+LL PLP +W
Sbjct: 176 CPMRNFLGHSQGLYWAHVAKGMYARQLERWFALVGRENIKVTFLEETAADPVGALASIFEFIGLDLLDEEGEKGLPNREAWESVVATVHNETDEKRKTILDQQVTPELLQSMRDFFASHNAELEELLGRPLPDNW 310
BLAST of mRNA_Ecto-sp13_S_contig7272.18421.1 vs. uniprot
Match: L1J6M3_GUITC (Sulfotransfer_1 domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J6M3_GUITC) HSP 1 Score: 65.1 bits (157), Expect = 9.030e-8 Identity = 40/115 (34.78%), Postives = 61/115 (53.04%), Query Frame = 3
Query: 108 LYNAHVGKSVYAMQLRRWFNAFGRENFKVVFTEDLEEEPVKTLEEVLDFIGLDMVDPQGDKGLRSLEMWSDIVGARFNTADRAKKKVLDSQVTPEMREEMRAFFAPYNKDLEDLL 452
L+N HVGK VY QLRRW + F +E F V E+ ++PV L E+L IG+ D + +S + V ++N + S E+ E+++AF+AP+N+ L LL
Sbjct: 191 LFNDHVGKGVYHEQLRRWMHIFPKERFYVCTLEEFSQDPVGKLSEMLSHIGMSEEDIR-----KSRSVLEQTVQKKWNVTQSSS-----SSADQEVLEQLKAFYAPHNEKLFQLL 295
BLAST of mRNA_Ecto-sp13_S_contig7272.18421.1 vs. uniprot
Match: A0A7S4KR35_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KR35_GUITH) HSP 1 Score: 65.1 bits (157), Expect = 1.900e-7 Identity = 40/115 (34.78%), Postives = 61/115 (53.04%), Query Frame = 3
Query: 108 LYNAHVGKSVYAMQLRRWFNAFGRENFKVVFTEDLEEEPVKTLEEVLDFIGLDMVDPQGDKGLRSLEMWSDIVGARFNTADRAKKKVLDSQVTPEMREEMRAFFAPYNKDLEDLL 452
L+N HVGK VY QLRRW + F +E F V E+ ++PV L E+L IG+ D + +S + V ++N + S E+ E+++AF+AP+N+ L LL
Sbjct: 321 LFNDHVGKGVYHEQLRRWMHIFPKERFYVCTLEEFSQDPVGKLSEMLSHIGMSEEDIR-----KSRSVLEQTVQKKWNVTQSSS-----SSADQEVLEQLKAFYAPHNEKLFQLL 425
BLAST of mRNA_Ecto-sp13_S_contig7272.18421.1 vs. uniprot
Match: A0A3M0YPR7_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M0YPR7_9BACT) HSP 1 Score: 58.2 bits (139), Expect = 1.710e-6 Identity = 39/117 (33.33%), Postives = 61/117 (52.14%), Query Frame = 3
Query: 123 VGKSVYAMQLRRWFNAFGRENFKVVFTEDLEEE--PVKTLEEVLDFIGLDMVDPQGDKGLRSLEMWSDIVGARFNTADRAKKKVLDSQVTPEMREEMRAFFAPYNKDLEDLLAVPLP 467
+G S+Y L+RW + FG E +V FTE L + +TL+E+L ++ L D +SD+V +N A +A + + + ++AFFAP+N+ L DLL V LP
Sbjct: 42 LGPSLYVRHLKRWLDVFGPERLRVWFTEHLADPHTAARTLDEILAYLELAPFD------------YSDLVRKWYNKAPKAN-------LPKGIEQALKAFFAPWNEALADLLGVKLP 139
BLAST of mRNA_Ecto-sp13_S_contig7272.18421.1 vs. uniprot
Match: A0A6N6KHC5_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A6N6KHC5_9BACT) HSP 1 Score: 58.9 bits (141), Expect = 7.570e-6 Identity = 38/116 (32.76%), Postives = 63/116 (54.31%), Query Frame = 3
Query: 123 VGKSVYAMQLRRWFNAFGRENFKVVFTEDLE--EEPVKTLEEVLDFIGLDMVDPQGDKGLRSLEMWSDIVGARFNTADRAKKKVLDSQVTPEMREEMRAFFAPYNKDLEDLLAVPL 464
+G S+Y +L +W N FGR+ V+ +EDL+ E+ V +E++ D++ + D LR + + RFN A Q+ ++REE++AFFAPYN+ L + L + L
Sbjct: 178 LGPSIYMKKLPKWLNIFGRDRLFVIRSEDLQQPEKAVGIMEQLFDYLQITEFD------LREM------LNQRFNVAP-------PKQMPEDIREELQAFFAPYNQQLNEFLGLHL 274
BLAST of mRNA_Ecto-sp13_S_contig7272.18421.1 vs. uniprot
Match: F2UC35_SALR5 (Sulfotransfer_1 domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UC35_SALR5) HSP 1 Score: 60.1 bits (144), Expect = 1.130e-5 Identity = 40/120 (33.33%), Postives = 61/120 (50.83%), Query Frame = 3
Query: 129 KSVYAMQLRRWFNAFGRENFKVVFTEDLEEEPVKTLEEVLDFIGLDMVDPQGDKGLRSLEMWSDIVGARFNTA-DRAKKKVLDS---QVTPEMREEMRAFFAPYNKDLEDLLAVPLPSSW 476
+ +Y++ LR WF + R+ F + + + P L+E F+G+D D +R + +V RFNTA D + +S QV ++ FF PYN+DLE LL + LPSSW
Sbjct: 602 EGLYSVHLRHWFKRYPRDQFLLFIYDHFFKHPSGHLKEAYRFLGMD------DSVVRCRK----VVQRRFNTASDNVRVNFTESHIHQVDAHTDAHLKKFFEPYNRDLEALLNITLPSSW 711 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7272.18421.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7272.18421.1 >prot_Ecto-sp13_S_contig7272.18421.1 ID=prot_Ecto-sp13_S_contig7272.18421.1|Name=mRNA_Ecto-sp13_S_contig7272.18421.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=116bp MQLRRWFNAFGRENFKVVFTEDLEEEPVKTLEEVLDFIGLDMVDPQGDKGback to top mRNA from alignment at Ecto-sp13_S_contig7272:1773..5299+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7272.18421.1 ID=mRNA_Ecto-sp13_S_contig7272.18421.1|Name=mRNA_Ecto-sp13_S_contig7272.18421.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3527bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7272:1773..5299+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7272:1773..5299+ >mRNA_Ecto-sp13_S_contig7272.18421.1 ID=mRNA_Ecto-sp13_S_contig7272.18421.1|Name=mRNA_Ecto-sp13_S_contig7272.18421.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=348bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7272:1773..5299+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |