mRNA_Ecto-sp13_S_contig7258.18393.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7258.18393.1
Unique NamemRNA_Ecto-sp13_S_contig7258.18393.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7258.18393.1 vs. uniprot
Match: D7FTG3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTG3_ECTSI)

HSP 1 Score: 647 bits (1669), Expect = 2.020e-224
Identity = 315/326 (96.63%), Postives = 320/326 (98.16%), Query Frame = 3 
Query:   66 MPSSNHPSGRGEAWKAPPPGDAQNVAQLLRRRREGKIPASTGGGVLGGSTSARATSAALRGIRGVGGRVGAGGVSVPRDFGFRRNLGQHPSMIQRLRHTATLRGHSGCVNRLCWNDAGTRIASGSDDTTVCLFDAASGKRDVQFRTGHRRNILSVKFLPCTNDQILVTGAMDGEVRLHKAPFSSHELTECFSCHDQRVHAVEVEPGNPFIFWSASEDGTVMQYDRRLPNAGLGEGRGSADSGQDSIAGRLRRRRNWGNCLIKLPSQADYVAGGGESGQGGGVSQQQAPSGWEARGNRAFHLACNPVDVHYLAVACGDYVARVYDRR 1043
            MPSSNHPSGRGEAWKAPPPGDAQNVAQLLRRRREGKIPASTGGGVLGGSTSARATSAALRGIRGVGGRVGAGGVS+PR FGFRRNLGQHPSMIQRLRHTATLRGHSGCVNRLCWNDAGTRIASGSDDTTVCLFDAASGKRDVQF+TGHRRNILSVKFLPCTNDQILVTGAMDGEVRLHKAPFSS ELTECFSCHDQRVHAVEVEPGNPFIFWSASEDGTVMQYDRRLPNAGLGEGRG ADSGQ S+AGRLRRRRNWGNCLIKLPSQADY AGGG+SGQGGGVSQQQ PSGWEARG+RAFHLACNPVDVHYLAVACGDYVARVYDRR
Sbjct:    1 MPSSNHPSGRGEAWKAPPPGDAQNVAQLLRRRREGKIPASTGGGVLGGSTSARATSAALRGIRGVGGRVGAGGVSMPRAFGFRRNLGQHPSMIQRLRHTATLRGHSGCVNRLCWNDAGTRIASGSDDTTVCLFDAASGKRDVQFQTGHRRNILSVKFLPCTNDQILVTGAMDGEVRLHKAPFSSPELTECFSCHDQRVHAVEVEPGNPFIFWSASEDGTVMQYDRRLPNAGLGEGRGWADSGQGSLAGRLRRRRNWGNCLIKLPSQADYAAGGGDSGQGGGVSQQQPPSGWEARGSRAFHLACNPVDVHYLAVACGDYVARVYDRR 326
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BLAST of mRNA_Ecto-sp13_S_contig7258.18393.1 vs. uniprot
Match: A0A835ZFA4_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFA4_9STRA)

HSP 1 Score: 168 bits (425), Expect = 1.020e-41
Identity = 104/245 (42.45%), Postives = 132/245 (53.88%), Query Frame = 3 
Query:  321 LGQHPSMIQRLRHTATLRGHSGCVNRLCWNDAGTRIASGSDDTTVCLFDAASGKRDVQFRTGHRRNILSVKFLPCTNDQILVTGAMDGEVRLHKAPFSSHELTECFSCHDQRVHAVEVEPGNP-FIFWSASEDGTVMQYDRRLPNAGLGEGRGSADSGQDSIAGRLRRRRNWGNCLIKLPSQADYVAGGGESGQGGGVSQQQAPSGWEARGNRAFHLACNPVDVHYLAVACGDYVARVYDRRVLS 1052
            L  H SMI +L   A L GH+GCVNR+ WND+GT + SGSDD  + +++  SG+R   F T H  NI  V+FL       +V+GAMD  V+LH  P+ +   T  + CH  RV  VEVEPG    ++WSASEDGTV QYDRRLP+AG    RG+      S AG            + +      + G   S       + + P+       RA  LA +P D   LAVACGD V RVYDRR LS
Sbjct:   31 LNVHRSMIHKLSQAAQLEGHTGCVNRIAWNDSGTLLVSGSDDMHIGVWEYPSGRRRELFHTQHTANIFGVRFL---GSDAIVSGAMDHSVQLHLEPYDAARTT-VYECHAGRVKDVEVEPGGAGHVWWSASEDGTVRQYDRRLPHAGCSASRGA----NPSSAGXXXXXXXXXXXNVLV------LVGAARS----SAQRPRVPA-------RAMGLAVSPTDPFALAVACGDNVVRVYDRRRLS 250
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BLAST of mRNA_Ecto-sp13_S_contig7258.18393.1 vs. uniprot
Match: A0A8B8AS21_CRAVI (WD and tetratricopeptide repeats protein 1-like n=4 Tax=Crassostrea TaxID=6564 RepID=A0A8B8AS21_CRAVI)

HSP 1 Score: 154 bits (389), Expect = 3.500e-37
Identity = 99/259 (38.22%), Postives = 131/259 (50.58%), Query Frame = 3 
Query:  279 GGVSVPRDFGFRRNLGQHPSMIQRLRHTATLRGHSGCVNRLCWNDAGTRIASGSDDTTVCLFDAASGKRDVQFRTGHRRNILSVKFLPCTNDQILVTGAMDGEVRLHKAPFSSHELTECFSCHDQRVHAVEVEPGNPFIFWSASEDGTVMQYDRRL--PNAGLGEGRGSADSGQDSIAGRLRRRRNWGNCLIKLPSQADYVAGGGESGQGGGVSQQQAPSGWEARGNRAFHLACNPVDVHYLAVACGDYVARVYDRRVL 1049
            GG+S  +   F+++L   P +IQRL  +  L+GH GCVN L WN+ GT +ASGSDD  V L+D    +      TGH+ NI SVKFLP TND ILVTGA D ++R++    +  E +  FSCH  RV  + V P  PF+FWSA+EDGT+MQ+D R   PN                       + N  N ++ L +   +VA                          A  LA NP+   YLAV   D   R+YDRR+L
Sbjct:   17 GGLSTQQ---FQQDLQVTPDLIQRLGLSKELQGHHGCVNCLEWNERGTLLASGSDDLNVILWDPLRHRTKATINTGHQGNIFSVKFLPNTNDSILVTGAADCKIRVYDT--NREENSHVFSCHIGRVKRLAVAPNVPFMFWSAAEDGTIMQFDLRCQEPN-----------------------QPNPKNVIVNLNAHIGHVA-------------------------EAKCLAINPLRPEYLAVGANDPYIRMYDRRML 222
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BLAST of mRNA_Ecto-sp13_S_contig7258.18393.1 vs. uniprot
Match: A0A7S1HGD3_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HGD3_HEMAN)

HSP 1 Score: 145 bits (366), Expect = 3.700e-37
Identity = 92/249 (36.95%), Postives = 121/249 (48.59%), Query Frame = 3 
Query:  321 LGQHPSMIQRLRHTATLRGHSGCVNRLCWNDAGTRIASGSDDTTVCLFDAAS---GKRDVQFRTGHRRNILSVKFLPCTNDQILVTGAMDGEVRLHKAPFSSHELTECFSCHDQRVHAVEVEPGNPFIFWSASEDGTVMQYDRRLPNAGLGEGRGSADSGQDSIAGRLRRRRNWGNCLIKLPSQADYVAGGGESGQGGGVSQQQAPSGWEARGNRAFHLACNPVDVHYLAVACGDYVARVYDRRVLSTG 1058
            L  H ++  RL     L+ H GCVNR+ WN  GT +AS SDD   C++   S    +    F TGH RNI  V+FLP T D+ +VTGAMD EVR H    +    T  ++CH  RV  VE+E GNP +FWSA EDG + Q+D RLP+A          SG               + LI L  + D  AG                     RG     ++  P   H +A ACGD + RV+DRR+++ G
Sbjct:   42 LQSHHALAVRLSLEKQLKEHEGCVNRISWNSTGTLLASVSDDCCCCVWSYGSYAQSQLSHSFETGHSRNIFGVRFLPETQDRQMVTGAMDCEVRHHTITDAGDVHTRVYNCHANRVKDVEIEHGNPHLFWSAGEDGKICQFDARLPSA----------SGS--------------HVLIDL--RKDPAAG---------------------RGAEVKSVSVCPQRPHLVAGACGDPIVRVWDRRMMAQG 243
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BLAST of mRNA_Ecto-sp13_S_contig7258.18393.1 vs. uniprot
Match: A0A6A3IP43_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3IP43_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.050e-36
Identity = 92/241 (38.17%), Postives = 127/241 (52.70%), Query Frame = 3 
Query:  330 HPSMIQRLRHTATLRGHSGCVNRLCWNDAGTRIASGSDDTTVCLFDAASGKRDVQFRTGHRRNILSVKFLPCTNDQILVTGAMDGEVRLHKAPFSSHELTECFSCHDQRVHAVEVEPGNPFIFWSASEDGTVMQYD-RRLPNAGLGEGRGSADSGQDSIAGRLRRRRNWGNCLIKLPSQADYVAGGGESGQGGGVSQQQAPSGWEARGNRAFHLACNPVDVHYLAVACGDYVARVYDRRVL 1049
            H S+++RLR  A LRGHSGCVN L WN++G  +ASGSDDT V ++  A  K+     +GHR NI +V F+P T+D +L TGAMD +VR+H APF + + ++ F  H  RV  +      P +FW+A+EDG V Q+D R LP AG     GS D+   S              LI L                            + R  R   +  +P+D   +A+ACGD+  R+YDRR+L
Sbjct:   50 HGSLVRRLRCEAVLRGHSGCVNTLQWNESGRLLASGSDDTKVVVWSYAQHKQQQVIESGHRLNIFAVCFVPGTDDHVLATGAMDNDVRVHYAPFRA-DSSKLFRVHRDRVKDIGTSWAVPKVFWTAAEDGLVFQFDLRALPKAG-----GSCDTADAS------------GVLINLGKDR------------------------KGRVLRGMGIVTHPLDPTKVALACGDFYTRMYDRRML 248
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BLAST of mRNA_Ecto-sp13_S_contig7258.18393.1 vs. uniprot
Match: A0A8B6DPE7_MYTGA (WD and tetratricopeptide repeats protein 1 (Fragment) n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6DPE7_MYTGA)

HSP 1 Score: 143 bits (361), Expect = 1.420e-36
Identity = 91/248 (36.69%), Postives = 117/248 (47.18%), Query Frame = 3 
Query:  309 FRRNLGQHPSMIQRLRHTATLRGHSGCVNRLCWNDAGTRIASGSDDTTVCLFDAASGKRDVQFRTGHRRNILSVKFLPCTNDQILVTGAMDGEVRLHKAPFSSHELTECFSCHDQRVHAVEVEPGNPFIFWSASEDGTVMQYDRRLPNAGLGEGRGSADSGQDSIAGRLRRRRNWGNCLIKLPSQADYVAGGGESGQGGGVSQQQAPSGWEARGNRAFHLACNPVDVHYLAVACGDYVARVYDRRVLS 1052
            F R+L   P +I RL     L GH GCVN L WN+ GT +ASGSDD  + ++D    K     RT H  NI SVKFLP +ND ILV+GA D ++ +H    +  E T  F CH  RV  + V P  PF+FWSA+EDG +MQ+D R P                        + N  N LI L +   ++ G  E                      A  +A NPV    +AV   D   R+YDRR L+
Sbjct:   24 FERSLQVTPELIDRLGLEKELEGHHGCVNCLEWNEKGTLLASGSDDVQIIIWDPFHHKSLTTLRTRHEGNIFSVKFLPNSNDSILVSGAADCKIHVHD--LNQEETTHDFGCHSGRVKRLAVAPNVPFMFWSAAEDGAIMQHDLRTPETS---------------------KTNPKNVLINLNA---HMGGNAE----------------------AKCIAINPVRPEQIAVGANDPYVRLYDRRKLT 223
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BLAST of mRNA_Ecto-sp13_S_contig7258.18393.1 vs. uniprot
Match: A0A210QSH0_MIZYE (WD and tetratricopeptide repeats protein 1 n=2 Tax=Pectinidae TaxID=6566 RepID=A0A210QSH0_MIZYE)

HSP 1 Score: 151 bits (381), Expect = 4.090e-36
Identity = 96/248 (38.71%), Postives = 127/248 (51.21%), Query Frame = 3 
Query:  309 FRRNLGQHPSMIQRLRHTATLRGHSGCVNRLCWNDAGTRIASGSDDTTVCLFDAASGKRDVQFRTGHRRNILSVKFLPCTNDQILVTGAMDGEVRLHKAPFSSHELTECFSCHDQRVHAVEVEPGNPFIFWSASEDGTVMQYDRRLPNAGLGEGRGSADSGQDSIAGRLRRRRNWGNCLIKLPSQADYVAGGGESGQGGGVSQQQAPSGWEARGNRAFHLACNPVDVHYLAVACGDYVARVYDRRVLS 1052
            F+R+L    + I RL     L+GH GCVN L WND G+ +ASGSDD  V ++D    K     RTGH+ NI SVKFLP ++D ++VTGA D ++R+H    ++ E T+ FS H  RV  + V P  PF+FWSA+EDGT+MQ+D R P    G G                   N  N LI L +   ++AG  E                      A  +A NP+    LAV   D   R+YDRR+LS
Sbjct:   24 FQRDLQVTGAFINRLGLDHELQGHQGCVNCLEWNDKGSLLASGSDDVQVIIWDPFLHKPLSTIRTGHQGNIFSVKFLPSSHDSVIVTGAADCKIRVHD--INTQETTQVFSSHAGRVKRLAVAPNVPFMFWSAAEDGTIMQHDLRTPEKSSGNG-------------------NPQNVLINLNA---HMAGSAE----------------------AKCIAVNPLRPDLLAVGANDPYVRLYDRRMLS 225
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BLAST of mRNA_Ecto-sp13_S_contig7258.18393.1 vs. uniprot
Match: A0A7S3FNU4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3FNU4_9CHLO)

HSP 1 Score: 143 bits (361), Expect = 5.350e-36
Identity = 91/242 (37.60%), Postives = 119/242 (49.17%), Query Frame = 3 
Query:  339 MIQRLRHTATLRGHSGCVNRLCWNDAGTRIASGSDDTTVCLFDAASGKRD-VQFRTGHRRNILSVKFLPCTNDQILVTGAMDGEVRLHKAPFSSHEL---TECFSCHDQRVHAVEVEPGNPFIFWSASEDGTVMQYDRRLPNAGLGEGRGSADSGQDSIAGRLRRRRNWGNCLIKLPSQADYVAGGGESGQGGGVSQQQAPSGWEARGNRAFHLACNPVDVHYLAVACGDYVARVYDRRVLS 1052
            ++++      L+GH GCVNRLCWN+ GT +ASGSDDT V L+     +R  +   T H+ NI  VKFLP + D  LVTGAMD EV+LH     S E    T     H  RV AVEVE GNP  FWS SEDG V+Q+D R              S ++ +    + R  +   L+++                                    HL+ NPV+ H LA+ACGD   RV+DRR+ S
Sbjct:   37 LLRKTDSPTVLKGHRGCVNRLCWNEQGTLLASGSDDTRVILWSYPEWRRPAIVVPTNHKANIFGVKFLPLSGDAKLVTGAMDCEVQLHHLERVSREHNVHTTTLDFHHNRVKAVEVEQGNPHNFWSGSEDGNVLQFDCR--------------SLREPVP-LFQCRARYDRTLVEVK-----------------------------------HLSINPVNPHLLALACGDPFVRVHDRRMAS 228
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BLAST of mRNA_Ecto-sp13_S_contig7258.18393.1 vs. uniprot
Match: UPI001EE57CDE (WD and tetratricopeptide repeats protein 1-like isoform X1 n=4 Tax=Haliotis TaxID=6452 RepID=UPI001EE57CDE)

HSP 1 Score: 150 bits (379), Expect = 7.390e-36
Identity = 93/249 (37.35%), Postives = 121/249 (48.59%), Query Frame = 3 
Query:  306 GFRRNLGQHPSMIQRLRHTATLRGHSGCVNRLCWNDAGTRIASGSDDTTVCLFDAASGKRDVQFRTGHRRNILSVKFLPCTNDQILVTGAMDGEVRLHKAPFSSHELTECFSCHDQRVHAVEVEPGNPFIFWSASEDGTVMQYDRRLPNAGLGEGRGSADSGQDSIAGRLRRRRNWGNCLIKLPSQADYVAGGGESGQGGGVSQQQAPSGWEARGNRAFHLACNPVDVHYLAVACGDYVARVYDRRVLS 1052
            GF+R L   P +I RL     L GH GCVN L WN+ GTR+ASGSDD  V ++D    +     RTGH+ NI SVKFLP  ND I+VTGA D ++R+H    +  + T+ FSCH  RV  +   P  PF+FWSA+EDGTVMQ+D R P +                      + N  N LI L +     A                          A  ++ N +    +AV   D   RVYDRR+L+
Sbjct:   22 GFQRVLQVTPDLINRLGLEKELEGHQGCVNCLEWNEDGTRLASGSDDVQVIIWDPFHHRSQTTVRTGHQGNIFSVKFLPNCNDSIVVTGAADCKIRVHD--LNLKDTTQVFSCHAGRVKRIATAPNVPFMFWSAAEDGTVMQFDLRSPESS---------------------QNNPRNVLINLLAHMGEYA-------------------------EAKCISINQLRPELIAVGANDPYVRVYDRRMLT 222
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BLAST of mRNA_Ecto-sp13_S_contig7258.18393.1 vs. uniprot
Match: A0A2D4CB75_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CB75_PYTIN)

HSP 1 Score: 150 bits (378), Expect = 1.180e-35
Identity = 92/247 (37.25%), Postives = 122/247 (49.39%), Query Frame = 3 
Query:  309 FRRNLGQHPSMIQRLRHTATLRGHSGCVNRLCWNDAGTRIASGSDDTTVCLFDAASGKRDVQFRTGHRRNILSVKFLPCTNDQILVTGAMDGEVRLHKAPFSSHELTECFSCHDQRVHAVEVEPGNPFIFWSASEDGTVMQYDRRLPNAGLGEGRGSADSGQDSIAGRLRRRRNWGNCLIKLPSQADYVAGGGESGQGGGVSQQQAPSGWEARGNRAFHLACNPVDVHYLAVACGDYVARVYDRRVL 1049
            F   L  H ++++RL   ATL  H GCVN L WN+ GT +ASGSDDT + L+D A+ +      TGH  NI +V F+P T D IL TGAMD +VR+H APF   + T+ F  H  RV  +   PG P +FWS  EDG V Q+D R   A  G    +AD        RL + R+  + L                                    R   +A +P+D   + VACGD+  R+YDRR+L
Sbjct:   51 FNATLQSHGALLRRLAVDATLESHRGCVNHLRWNEQGTLLASGSDDTRLILWDYATHRVRADIATGHVLNIFAVCFVPGTQDHILATGAMDKDVRIHYAPFR-RDSTKRFRFHRGRVKDIASSPGVPRVFWSVGEDGVVFQFDLRSLPATDGS---TADGDPSGALIRLGKGRHGRSTL------------------------------------RGMAMAVHPLDPTQVVVACGDFYTRMYDRRML 257
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7258.18393.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTG3_ECTSI2.020e-22496.63Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZFA4_9STRA1.020e-4142.45WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A8B8AS21_CRAVI3.500e-3738.22WD and tetratricopeptide repeats protein 1-like n=... [more]
A0A7S1HGD3_HEMAN3.700e-3736.95Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A6A3IP43_9STRA1.050e-3638.17Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
A0A8B6DPE7_MYTGA1.420e-3636.69WD and tetratricopeptide repeats protein 1 (Fragme... [more]
A0A210QSH0_MIZYE4.090e-3638.71WD and tetratricopeptide repeats protein 1 n=2 Tax... [more]
A0A7S3FNU4_9CHLO5.350e-3637.60Hypothetical protein (Fragment) n=1 Tax=Chloropico... [more]
UPI001EE57CDE7.390e-3637.35WD and tetratricopeptide repeats protein 1-like is... [more]
A0A2D4CB75_PYTIN1.180e-3537.25Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7258contigEcto-sp13_S_contig7258:583..7020 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score647.1
Seed ortholog evalue5.5e-183
Seed eggNOG ortholog2880.D7FTG3
Preferred nameWDTC1
Model size1321
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K11795,ko:K11804,ko:K11807,ko:K19199
KEGG ReactionR03875,R04866,R04867
KEGG Pathwayko00310,map00310
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000151,GO:0001101,GO:0001701,GO:0003674,GO:0004857,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006355,GO:0006357,GO:0006464,GO:0006629,GO:0006807,GO:0006950,GO:0007275,GO:0008150,GO:0008152,GO:0008361,GO:0009269,GO:0009414,GO:0009415,GO:0009628,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010035,GO:0010243,GO:0010468,GO:0010556,GO:0010558,GO:0010565,GO:0010605,GO:0010629,GO:0010883,GO:0010888,GO:0010889,GO:0010891,GO:0016043,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0019318,GO:0019538,GO:0019725,GO:0019899,GO:0030234,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031461,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032535,GO:0032868,GO:0032869,GO:0032870,GO:0032879,GO:0032991,GO:0035264,GO:0036211,GO:0040007,GO:0042221,GO:0042304,GO:0042393,GO:0042592,GO:0042826,GO:0043009,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043434,GO:0043687,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045717,GO:0045833,GO:0045892,GO:0045922,GO:0045934,GO:0046890,GO:0048519,GO:0048523,GO:0048589,GO:0048856,GO:0048878,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051055,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0055082,GO:0060255,GO:0062012,GO:0062014,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070647,GO:0070887,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071704,GO:0071840,GO:0080008,GO:0080090,GO:0090066,GO:0098772,GO:1901564,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1905952,GO:1905953,GO:1990234,GO:2000112,GO:2000113,GO:2001141
Exons8
EggNOG free text desc.negative regulation of fatty acid biosynthetic process
EggNOG OGsKOG1310@2759,KOG1334@1
EC2.1.1.43
Cds size1254
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7258.18393.1prot_Ecto-sp13_S_contig7258.18393.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7258 585..6955 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463993.271126-UTR-Ecto-sp13_S_contig7258:582..5841681463993.271126-UTR-Ecto-sp13_S_contig7258:582..584Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7258 583..584 -
1681463993.371514-UTR-Ecto-sp13_S_contig7258:6955..70201681463993.371514-UTR-Ecto-sp13_S_contig7258:6955..7020Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7258 6956..7020 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463993.283253-CDS-Ecto-sp13_S_contig7258:584..8611681463993.283253-CDS-Ecto-sp13_S_contig7258:584..861Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7258 585..861 -
1681463993.2923627-CDS-Ecto-sp13_S_contig7258:1486..17221681463993.2923627-CDS-Ecto-sp13_S_contig7258:1486..1722Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7258 1487..1722 -
1681463993.301196-CDS-Ecto-sp13_S_contig7258:2615..26941681463993.301196-CDS-Ecto-sp13_S_contig7258:2615..2694Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7258 2616..2694 -
1681463993.3166652-CDS-Ecto-sp13_S_contig7258:3686..37421681463993.3166652-CDS-Ecto-sp13_S_contig7258:3686..3742Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7258 3687..3742 -
1681463993.3274002-CDS-Ecto-sp13_S_contig7258:4078..41921681463993.3274002-CDS-Ecto-sp13_S_contig7258:4078..4192Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7258 4079..4192 -
1681463993.3400805-CDS-Ecto-sp13_S_contig7258:5409..55821681463993.3400805-CDS-Ecto-sp13_S_contig7258:5409..5582Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7258 5410..5582 -
1681463993.3499355-CDS-Ecto-sp13_S_contig7258:6517..67221681463993.3499355-CDS-Ecto-sp13_S_contig7258:6517..6722Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7258 6518..6722 -
1681463993.361248-CDS-Ecto-sp13_S_contig7258:6841..69551681463993.361248-CDS-Ecto-sp13_S_contig7258:6841..6955Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7258 6842..6955 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7258.18393.1

>prot_Ecto-sp13_S_contig7258.18393.1 ID=prot_Ecto-sp13_S_contig7258.18393.1|Name=mRNA_Ecto-sp13_S_contig7258.18393.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=418bp
MPSSNHPSGRGEAWKAPPPGDAQNVAQLLRRRREGKIPASTGGGVLGGST
SARATSAALRGIRGVGGRVGAGGVSVPRDFGFRRNLGQHPSMIQRLRHTA
TLRGHSGCVNRLCWNDAGTRIASGSDDTTVCLFDAASGKRDVQFRTGHRR
NILSVKFLPCTNDQILVTGAMDGEVRLHKAPFSSHELTECFSCHDQRVHA
VEVEPGNPFIFWSASEDGTVMQYDRRLPNAGLGEGRGSADSGQDSIAGRL
RRRRNWGNCLIKLPSQADYVAGGGESGQGGGVSQQQAPSGWEARGNRAFH
LACNPVDVHYLAVACGDYVARVYDRRVLSTGYVDTSSGGGGGGGGGAAAT
AVDSRRRPYRSVRRTNTRRRGRLLPPPRRLLLLPGGVAVPAEEAWGRSAP
RATPHPWRSAPMGGGCW*
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mRNA from alignment at Ecto-sp13_S_contig7258:583..7020-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7258.18393.1 ID=mRNA_Ecto-sp13_S_contig7258.18393.1|Name=mRNA_Ecto-sp13_S_contig7258.18393.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6438bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7258:583..7020- (Ectocarpus species13 EcNAP12_S_4_19m)
TCCAGCGAGAAACTTTATCCAAGAACTACCGTCCGGCTTCGGTTTTCCGC
AAAAAGGCGTGAGCCATGCCGTCGAGCAACCACCCCTCTGGTCGCGGCGA
GGCGTGGAAGGCACCACCACCAGGCGACGCGCAGAACGTGGCACAGCTGC
TGCGACGCCGCCGGGAAGGGAAGATTCCGGTGGGTGTTATTCCATTACTT
GTTTGTTTCCTGTCGCTGCCCGTCTCTCCTTCCTTGTCGCCCTTCGTTCT
TGCTTGCAAGAACCTGACGTATTGTCTGACTGACCGACTGCTACTTAGGC
GTCGACAGGTGGCGGGGTCTTGGGAGGCAGCACCAGCGCGAGGGCGACGA
GCGCCGCCCTTCGCGGCATCAGGGGTGTCGGAGGCAGAGTGGGGGCGGGG
GGAGTCTCTGTGCCGAGAGATTTTGGCTTTCGTCGGAATCTGGGGCAGCA
CCCGTCGATGATCCAAAGGCTAAGGCACACCGCTACGCTGCGTGGTCACT
CCGGTGAGTGTGCCTGCTCGGTTACGGCCCTCGTTCACCTTTACTTGGTT
CTCTTGTCCCGCTCTCTTTTCGAAATTGCTCTTCTTTCTCTCTCTACTTC
TGTCTTTCTATCTATCTGTCTGTCTGTCTGTCCATGTCTACGTCTCCGTC
CCTTGAGCGGTTTCGATATCCCTGCGTCTCTCTCCCTCCCACCCACCCAC
AACCCCACCTCCAAGACAAGGAGCTGTTGTCTTTTGTTCCCCTCTGAGCT
CGACCTGTTTCCGCTTGTCAGCCTGTGAGCGCGGTCGACGCTGTTGCACC
ATTGCGGCGACACACACACACATACACACACAAGTGAGACTGACGTGTTT
TCATTGGTCAGCCGCTTAGCGCAGTCGACGCAAAGTAACTGCCACTCACA
CGCACCCGCGCAACAGTGGCGTCTCATCGACGGTAGCCGTCCGGTGCGCA
CGGTGGAGGCTACATTAGCAAACACACGCTCGGGCACACTTCGTAGGTAC
TTGATGTCCTTGGGGGTGACGACCATATCCTTCATGGCCCCTTACCCCCA
GGATCTTGGCTTTGTTCCTGCTCTTTAGACTGGCGTCTCCTTGCTAGTTG
ACCGGATAGCGCGGATGCTGCTACAACGGGAGAAGCACCCCCACGGCCTT
CCAGGCGTGCTATCTCCCCCCTCCCCCCACGGTCTTCTTATATCCCAATT
GCGGTGCCTACCGCTTGGGCGCATCCTTCCGTGATTCTCGTGGCTTGACC
GGCAGGTGTGTGACCTGTTTAGGGTGTGCTGTTTGGCTTCCCCTCCGTGC
CGTCACGCGACTTGACCGACTACTGTGTGCTTGTGCACGGTCACGTTTCT
GCAAGTGTTTCTGTGCGCTGACCAATGAGAATGCGCCAGTCTCGGTACGG
CTCAACCTCTGCGTGTGCGTGTTTGCTCGCATGTTCAGGGTGCGTCAATC
GGCTGTGCTGGAACGACGCCGGCACGCGGATCGCCTCCGGCTCCGACGAC
ACGACTGTCTGCCTCTTCGACGCGGCTTCGGGCAAGCGAGACGTGCAGTT
TCGGACGGGCCACCGCAGGAACATCTTGAGCGTGAAGTTTCTTCCTTGCA
CAAACGACCAGGTAGATACAACAGCTGGGGACGCGAAATCAGTGAGGCAC
AGCAGGTTTCGTACGACAACACCCCCCCCCCCCCCTCCCTGACGGCTTTT
CACCGCCCAATTTACTCTGCCGCAGTAGCAGCAGTAGTGACGGTGTGTGG
AAGACCGGCGGGATAATCGTCTCGTCGAGGCCTTTTCTCCGAAACTACAT
AATTTTTTTTATCGTGCGCTTCCTTTGTTGGGGTCACCGAGCTTCGAAAT
CATTCCAGGGGGTGTGCTCTCTGATACGACGTAGGGGTACTTTTGTCTAT
TCACACTCATGTCGAGGGTGCACCGAATATTAATTTGACGAAGGGGGAGG
GGAGAGTAAACGCATGGCGGTAGACATCCCCAGTCAGAGAAAAATCACAC
CAGGAGGACGTCGGTTGTTTAATAGCGTGTGTATCGTTTCTCCCCTCCTT
TTATCCTCTCCCTCTATTTCAAGCCTTCGGCCGCAAGCCATGCAAGTTCC
CCGCGGGGAATCCTTCTGCTCGACTGTTCCGTGGCTATCTGAATCTCATC
GCGCGCAATTCGTGCCCGGCCACAGTCACAGCGCTTTTTAGCAGTCCTGG
GAAGGTAGATATTTGGGATTTGAGTACAAGAACCTCAGCGGTTGTTCTGG
GTTACGCTTGTAGGCTTGGCGGGGAAGTTGCAACTCTCTGGGAAGCTGTG
TCTTCAGATTTTCCGAAAAGCAAATTTACATCTGGGTCTTCAGGGATAGC
TACGTGTGTGCACCTCGCAAGAGATGGACGAATGTGTTGTGGGTGCTACA
GTAGCGCTGCCCCTCTCCCGCGACGTCCTTTCGCTGTTTGCTGTCGAACA
CTGGGGATGCGAAAATCGCACGGCACGGCGCGTTACCCCCCGAGGATATC
GTTGGAGCACACTGATGGAACCCAGACCATCAAGGGTCTGCATTGCGTGT
GTAGAAAACAACAAAGCGCTATGTTTCCTCGACTTGGTGCTGAGGAGGCA
GTTTCGACGCTCAGAAACGCGTCTTTCTTCAGCGGAACCCCTGATATCTG
TTCGTATCTACATCCAAGGAAAGCGGTTTGGCAGCGCGAAAGAAAACGCG
ATGGGATAGGAAATACCTTTGAGGCATGACGAAGTCACGGCGTCGGAAAC
ATGCAAGGACCCACCCATCCCCACCCCCGCACGTCTGCTTGGCGGGATGA
CGATCAATGTCTCGTTCTCTCTCGACAGATATTGGTCACCGGAGCGATGG
ACGGGGAGGTCCGTCTTCACAAGGCGCCGTTCTCTTCACACGAGCTGACC
GAGTGCTTCTCGTGCCACGACCAACGCGTGCACGCCGTCGAGGTGAGATA
CTCAACAAGACGGTGAAATCACCACTAGAAAACAGCACCCAAGGCCTTTC
AGTATTTGTCGAGTGCACTGTCTGATTTATTTCTGGTTGGCACGCTTCAT
CCGGCGGTGCTCGTGTGGAAACTAACCGTGGTTCCGATTCGGGTGGCCGT
GGCGGTCTTCTCGACCCCGCCCCGCAAACATGAAAGAACAGATTTTTCTT
CTGTACAACTTCTTTTGAAGGTTCAGCTTTCGCGACCAGCTCAAATAGAC
GGGAGATGGCGCAGGATTGGCGTTTGAAATTCCGTCATAATCTTTTCACC
CTTTTTCCATTTCCCCCGTCCCATGCAGGTGGAGCCAGGCAACCCGTTCA
TCTTCTGGTCCGCCAGCGAAGACGGGACTGTCATGTACGTACCGTTTGTC
GATGCGTACCTTCTCCCAGAACTCTATCTTGTATGTTGCTGGCTTGTCAC
GGCCGAGCTTCCTCGCGCAGGCCCTCCAGGTCTAGCTTCGTCGAAGGCAG
ATCTCCGTGCATTTTCCTGACTTTGGGCTATACCCTTTTGCCGAAATTCG
CGACCATGTCCGTTTTCGGTGGAGGTCATTTCCTCTGTATTGCGAACCAA
TTAGGGACAGTCTCGGGTTTTGCACCTCTTGCTTTGTCGCTCATTCGAAA
GCGCTAACGACCACGATACGAGCCAGGCCCTTGCGATAGGTGAACTCTCG
ATGCAAAGGCTGACAGTTTTGGTTTTACAAGGAGGTGTCGTTGAGGCAAT
GTCTCTCTTGCTCCTCCACTCATTTGACGAGACACTTCTTGTATCGAGGA
AGTGTGTTCGTTCCAGAGAGCATGTGTCGAGGCTCTGCCCTGACGGTGCT
GCTTATAAAAAGAAAAGAACAACGCTCACGACGGGTACGTTCCTGGTAGT
TTTTTTTCGGCACAGACGAACACCTCGTGTGCTGGAAGTGTACTCGTAGA
CTCGAGTGAGAGTGTTCAACCCGCCACCCGTTTCCGCCACCCCGTACTTA
TCTGGCTTCTACTTGCCATATACATTTTTCGGACGTTGCTCATTTGAGGA
GGCCATTGTATCCCGGTTTTCTGCATGTAACGGCAAGACCCTGGGAGTTA
TGACCTGGGGACCCAAAAGTTGAGAGCTTGACCGTGTAAGTACAGGTGCT
TGGGATCCTGCTCTTTTGATACATTCAAAGCCGTTGAGTTCGTTACCTCA
TGGAATAGCTTGAGTGGTGGCGCGTTCTGTGCGATAGCTTGTGAAAACCG
AGGGCAGATGTGCTCTAGTGCGGCGTAATGACGGAGGTCGACAAGACGGC
ACCCTAGCCCTTGTGTTGTCTCGCTCTCGCTTCGCTGTCTCATTGACACC
GTCGCGTGCATCCCATTGGCTGGCAGGCAATACGACCGCCGTCTGCCAAA
CGCTGGCCTCGGGGAGGGGAGGGGGTCGGCGGACAGCGGCCAAGACTCCA
TCGCGGTACGTTCCACGGGCACGTGCGCGTCGTTGTCCGAATATCGCGGC
GTCGCCGTTCAGTAGGGCCAGCTTTGTTTCGATGATGTGTGCATGCCATC
GCCGGCTCATGAGGATCAGGGGTTCCGCCAGGGAACTGATACCGCCGCTA
ACAAGGCAGAGTTGTGAAGGTTGGTTCGGGGAGTGTGGTACCTTGCGCAA
CGTGCGCTTACTCTTTGCTCGGGCTATCCGCCTGCGTTGGCCCGCTGGCC
GCTGACCGTAGAGGAGGTTGCTCTTGGCTCTTCTTCTCCCCGCACAGCTT
TTTTCGTGCGCGTGGGGCATCCAGCGTCATCTTGCCGCTTGCGATAGCGT
ACCATGATCTTTCCCACCGATAGAATGGTTCCGTTCTGCGCCGACTGGGC
CGGGGGCAAAATTTTCAGTCGCCGGCCTGGAGCGGCAGGCAGATCGTGGC
GACTATTAGCATGGGTAAGGCGTGAGTGTTGGGTGGTGTTGCTTGCCCGA
CTGTCTGCCAGTCTTTCGGCAAGGGTGGCGTTCTCCCGCGTGGCCCCCCT
CTTCATTGACCGAACAATTTTCCCCCCTTCCCTCACGCCTGGTTCGGTGA
GAACCCGGCGTGCTCCGTCCCAGCTTTGTAGGGATGCGAGGTCAATGGTC
GAACGACTACGGCATGCACGACTATGAGTACCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCTCCGCACAAGGCCACACAAAACACAAAAACCCATGCCCCC
TCTCCCCGCCCCGTCCCCCAGCCAACNNNNNNNNNNGTTTTTGAGGGAGG
GGGGGTAAAAGGTCGAACCACTACCGAAGCCACGACTATGATCCCCCCCC
CCCCCCCCCCCCCCCCCCGCTTCCCGCACGCCTTCAACGACACGGAAGGG
GCGACTCCGACGCAGAAGAAACTGGGGCAACTGCCTCATTAAGCTGCCGT
CGCAGGCTGACTACGTTGCCGGCGGTGGCGAAAGCGGCCAAGGCGGGGGT
GTTTCGCAACAGCAGGCGCCATCAGGATGGGAGGCCCGCGGCAATCGAGC
GTTTCACCTCGCCTGCAACCCCGTCGACGTCCACTACCTCGCCGTGGCCT
GCGGTGACTACGTCGCCAGGGTGTACGACAGGAGGTGCGGCGGGGATCGA
GATTCACTTTTTTCGGGGCCGTTGGGCAAGGGGGCGAGGTTAGGGGACCG
CGCCTTCTCGAGAAATTACGTTTTTATGAGGAAATAGAACAAGAAAGGGG
TACACGGACAGCCCCCCAAACCCCAACCTTAACCCAACTCCCCCGATTGC
GTTCTGTTTTCAAAATGTTTGACTTGGTTTAATATACTTGCGAAGGATAG
TGAGGCTAGGCCAGGATGTCCTCTGAGTGGCGGCTCACTGGCGGGCGGCG
GCATGGCATATGACCAGAAACTCGATTGTTGATTGTTTGTGGAGTCAATG
TCTGCGTAAGGTTGCCCGTGTTTTCCTTTCGGGTGGTTCTCGTGCCGGGC
ATCGGGTCGACCTGCCACGGCGTCGTACGAACGCACCACAAATACGGAAA
AATATGCCGCGAAGAATGTTGCCCCCCTCTCGCACGGGCTTGGCCTTTCG
GTACCTTGACTCAGCCGAGACGTGGTTTGGGACCCGCGTGTCGCTCGTTT
CCTGCCGACCGTTCCCGCCACGCCCACCACCAAAACCACGCCACGCGACA
CTATTTGTCCCACCTCGACACCAGCCCCGACATGTTCACTCCTCCCGTCC
TCGAGGCAGGGTGCTCTCGACCGGGTACGTTGACACGTCCAGCGGCGGCG
GCGGCGGCGGCGGCGGCGGCGCGGCGGCAACAGCGGTCGACAGCCGCCGC
CGGCCCTATCGTTCTGTCCGGCGAACGAACACCCGGCGGCGGGGAAGGCT
GCTTCCGCCGCCTCGTCGTCTTCTTCTTCTTCCGGGAGGGGTGGCAGTGC
CCGCGGAGGAAGCGTGGGGACGTTCGGCACCGCGCGCCACGCCACATCCG
TGGCGTTCAGCCCCGATGGGCGGGGGCTGCTGGTGAGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7258:583..7020-

>mRNA_Ecto-sp13_S_contig7258.18393.1 ID=mRNA_Ecto-sp13_S_contig7258.18393.1|Name=mRNA_Ecto-sp13_S_contig7258.18393.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1254bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7258:583..7020- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCGTCGAGCAACCACCCCTCTGGTCGCGGCGAGGCGTGGAAGGCACC
ACCACCAGGCGACGCGCAGAACGTGGCACAGCTGCTGCGACGCCGCCGGG
AAGGGAAGATTCCGGCGTCGACAGGTGGCGGGGTCTTGGGAGGCAGCACC
AGCGCGAGGGCGACGAGCGCCGCCCTTCGCGGCATCAGGGGTGTCGGAGG
CAGAGTGGGGGCGGGGGGAGTCTCTGTGCCGAGAGATTTTGGCTTTCGTC
GGAATCTGGGGCAGCACCCGTCGATGATCCAAAGGCTAAGGCACACCGCT
ACGCTGCGTGGTCACTCCGGGTGCGTCAATCGGCTGTGCTGGAACGACGC
CGGCACGCGGATCGCCTCCGGCTCCGACGACACGACTGTCTGCCTCTTCG
ACGCGGCTTCGGGCAAGCGAGACGTGCAGTTTCGGACGGGCCACCGCAGG
AACATCTTGAGCGTGAAGTTTCTTCCTTGCACAAACGACCAGATATTGGT
CACCGGAGCGATGGACGGGGAGGTCCGTCTTCACAAGGCGCCGTTCTCTT
CACACGAGCTGACCGAGTGCTTCTCGTGCCACGACCAACGCGTGCACGCC
GTCGAGGTGGAGCCAGGCAACCCGTTCATCTTCTGGTCCGCCAGCGAAGA
CGGGACTGTCATGCAATACGACCGCCGTCTGCCAAACGCTGGCCTCGGGG
AGGGGAGGGGGTCGGCGGACAGCGGCCAAGACTCCATCGCGGGGCGACTC
CGACGCAGAAGAAACTGGGGCAACTGCCTCATTAAGCTGCCGTCGCAGGC
TGACTACGTTGCCGGCGGTGGCGAAAGCGGCCAAGGCGGGGGTGTTTCGC
AACAGCAGGCGCCATCAGGATGGGAGGCCCGCGGCAATCGAGCGTTTCAC
CTCGCCTGCAACCCCGTCGACGTCCACTACCTCGCCGTGGCCTGCGGTGA
CTACGTCGCCAGGGTGTACGACAGGAGGGTGCTCTCGACCGGGTACGTTG
ACACGTCCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGCGGCGGCAACA
GCGGTCGACAGCCGCCGCCGGCCCTATCGTTCTGTCCGGCGAACGAACAC
CCGGCGGCGGGGAAGGCTGCTTCCGCCGCCTCGTCGTCTTCTTCTTCTTC
CGGGAGGGGTGGCAGTGCCCGCGGAGGAAGCGTGGGGACGTTCGGCACCG
CGCGCCACGCCACATCCGTGGCGTTCAGCCCCGATGGGCGGGGGCTGCTG
GTGA
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