mRNA_Ecto-sp13_S_contig72525.18387.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig72525.18387.1 vs. uniprot
Match: D7G7P0_ECTSI (Glycine/D-amino acid oxidase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7P0_ECTSI) HSP 1 Score: 146 bits (368), Expect = 1.680e-43 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1
Query: 1 SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVDANLI 219
SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVDANLI
Sbjct: 5 SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVDANLI 77
BLAST of mRNA_Ecto-sp13_S_contig72525.18387.1 vs. uniprot
Match: A0A6H5L433_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L433_9PHAE) HSP 1 Score: 142 bits (358), Expect = 5.540e-38 Identity = 71/73 (97.26%), Postives = 72/73 (98.63%), Query Frame = 1
Query: 1 SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVDANLI 219
SGMQSPLSFGGFACLTRH+KRISEALSEALEGDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERV ANLI
Sbjct: 471 SGMQSPLSFGGFACLTRHMKRISEALSEALEGDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVGANLI 543
BLAST of mRNA_Ecto-sp13_S_contig72525.18387.1 vs. uniprot
Match: A0A7S0F7P2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia arenysensis TaxID=697910 RepID=A0A7S0F7P2_9STRA) HSP 1 Score: 100 bits (249), Expect = 4.780e-23 Identity = 47/73 (64.38%), Postives = 57/73 (78.08%), Query Frame = 1
Query: 1 SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVDANLI 219
SG+QSPLSFGGF LTRH+ RI A+SEALE DLL K LGL+N YQP+L++ WMFQK+MSV +GE VD +
Sbjct: 584 SGIQSPLSFGGFGALTRHLDRIGGAISEALENDLLHKDDLGLINDYQPNLSAAWMFQKAMSVKMGENVDPKFV 656
BLAST of mRNA_Ecto-sp13_S_contig72525.18387.1 vs. uniprot
Match: A0A7S3PA49_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PA49_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 9.590e-23 Identity = 44/73 (60.27%), Postives = 59/73 (80.82%), Query Frame = 1
Query: 1 SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVDANLI 219
SG+QSPLSFGGF LTRH++RIS A+ +AL DLL K+ LG +NAY P+L++TWMFQ+SMSV +G+ VD+ +
Sbjct: 50 SGIQSPLSFGGFGALTRHLERISGAVHDALADDLLHKEDLGKINAYTPNLSATWMFQRSMSVRMGQSVDSKFV 122
BLAST of mRNA_Ecto-sp13_S_contig72525.18387.1 vs. uniprot
Match: K8EY35_9CHLO (FAD dependent oxidoreductase n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EY35_9CHLO) HSP 1 Score: 97.8 bits (242), Expect = 4.180e-22 Identity = 44/65 (67.69%), Postives = 56/65 (86.15%), Query Frame = 1
Query: 1 SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVG 195
SGMQSPLSFGG AC+ RH+ RIS AL+EALE D++DKK+LG +NAYQP+L++ W+FQ+ MSV VG
Sbjct: 451 SGMQSPLSFGGLACMLRHLPRISLALTEALEADIVDKKALGTINAYQPALSAAWLFQRCMSVQVG 515
BLAST of mRNA_Ecto-sp13_S_contig72525.18387.1 vs. uniprot
Match: A0A7S2N0B1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N0B1_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 6.030e-22 Identity = 42/73 (57.53%), Postives = 56/73 (76.71%), Query Frame = 1
Query: 1 SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVDANLI 219
SG+QSPLSFGGF LTRH++R+S+ +SEALE D L K L +NAY P+L++ WMFQK+MSV +G+ VD +
Sbjct: 52 SGIQSPLSFGGFGALTRHLERLSDGISEALEADCLHKDDLAEINAYTPNLSAAWMFQKAMSVRMGQNVDPKFV 124
BLAST of mRNA_Ecto-sp13_S_contig72525.18387.1 vs. uniprot
Match: A0A1Z5KQS6_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQS6_FISSO) HSP 1 Score: 96.7 bits (239), Expect = 1.080e-21 Identity = 45/73 (61.64%), Postives = 58/73 (79.45%), Query Frame = 1
Query: 1 SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVDANLI 219
SG+QSPLSFGGF LTRH+ RI+ A+SEALE DLL K LG +N Y P+L++TWMFQK+MSV G++ DA+ +
Sbjct: 985 SGIQSPLSFGGFGALTRHLSRITGAVSEALELDLLHKDDLGAINPYTPNLSATWMFQKAMSVKPGQKTDADFV 1057
BLAST of mRNA_Ecto-sp13_S_contig72525.18387.1 vs. uniprot
Match: A0A7S3QIW6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QIW6_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 1.460e-21 Identity = 44/73 (60.27%), Postives = 58/73 (79.45%), Query Frame = 1
Query: 1 SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVDANLI 219
SG+QSPLSFGGF LTRH++R+S A+ EAL DLL K+ LG +NAY P+L++ WMFQK+MSV +G+ VD+ I
Sbjct: 476 SGIQSPLSFGGFGALTRHLERVSGAVDEALRYDLLTKEDLGEINAYTPNLSAAWMFQKAMSVRIGQNVDSKFI 548
BLAST of mRNA_Ecto-sp13_S_contig72525.18387.1 vs. uniprot
Match: A0A7S2XQ48_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XQ48_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.520e-21 Identity = 44/73 (60.27%), Postives = 55/73 (75.34%), Query Frame = 1
Query: 1 SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVDANLI 219
SG+QSPLSFGGF LTRH++RIS A+ EALE D L K L +NAY P+L++ WMFQK+MSV VG+ VD +
Sbjct: 220 SGIQSPLSFGGFGALTRHLERISNAIVEALEDDCLHKDDLAEINAYTPNLSAAWMFQKAMSVRVGQNVDPKFV 292
BLAST of mRNA_Ecto-sp13_S_contig72525.18387.1 vs. uniprot
Match: A0A7S1ZFZ8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZFZ8_TRICV) HSP 1 Score: 95.1 bits (235), Expect = 2.650e-21 Identity = 45/73 (61.64%), Postives = 57/73 (78.08%), Query Frame = 1
Query: 1 SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVDANLI 219
SG+QSPLSFGGF LTRH+ RIS A+SEALE L K LGL+NAY P+L++ WMFQK+MSV +G+ VD+ +
Sbjct: 260 SGIQSPLSFGGFGALTRHLGRISGAVSEALETGCLHKSDLGLINAYTPNLSAAWMFQKAMSVRMGQDVDSKFV 332 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig72525.18387.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig72525.18387.1 >prot_Ecto-sp13_S_contig72525.18387.1 ID=prot_Ecto-sp13_S_contig72525.18387.1|Name=mRNA_Ecto-sp13_S_contig72525.18387.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=71bp MQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKKSLGLVNAYQPSLTSback to top mRNA from alignment at Ecto-sp13_S_contig72525:6..608- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig72525.18387.1 ID=mRNA_Ecto-sp13_S_contig72525.18387.1|Name=mRNA_Ecto-sp13_S_contig72525.18387.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=603bp|location=Sequence derived from alignment at Ecto-sp13_S_contig72525:6..608- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig72525:6..608- >mRNA_Ecto-sp13_S_contig72525.18387.1 ID=mRNA_Ecto-sp13_S_contig72525.18387.1|Name=mRNA_Ecto-sp13_S_contig72525.18387.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=213bp|location=Sequence derived from alignment at Ecto-sp13_S_contig72525:6..608- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |