mRNA_Ecto-sp13_S_contig7227.18355.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7227.18355.1
Unique NamemRNA_Ecto-sp13_S_contig7227.18355.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7227.18355.1 vs. uniprot
Match: D7G7D9_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7D9_ECTSI)

HSP 1 Score: 1070 bits (2768), Expect = 0.000e+0
Identity = 578/675 (85.63%), Postives = 598/675 (88.59%), Query Frame = 1 
Query:    1 MNDAAVSVGVSEQVVHHPSQKQLRELLQMLMGTPAGVVQQVGYLLMLIVAVVKAGSPVTDAGDGSDGGE---TGGGNCGSQSQVARSAAGRLRDTTAEERKEAIVLLQTAHKELKKNKTRGAGKGGKGRMCVSTRSGPSNEAKAKGLQTWAAKGKRHVGHLQQLLLRSGVAVRGRQDHARLLNFHAKRISSEEAKXXXXXXXXXFEMMKATINNSILNSCGEAKSADTAAAGQRSSGRSDDDVGDDDPSASKRSNGFSERNGRGAENMISARSLPSACADDVMDDDFETPPTETMMERPPRDDAGSGQETSAASVAGRQMITLDGHMPTVLFSGIGGATATVSEAARAMAAQGEGITKDNRMARELKSLRSLGSPHYTIELAGPHDGSDLLTLAFANAGLDLYEMLADPHLHEGMSNLDMMRLFGGLVNGVLSIHDQGFAHGNINPKSVRVVSGENARWVIRDFDSAGAVIGKDHVSGGLFFEYLAPEAMAYATEECNTPVLLRESVDAYALGQICYQVLARDPMPPLSAETRSVQTEVETRRPTKETVLSPEVFRPPSPLLFREHTVRILAGLLHDDPSERLGVRALHDFASFEPLWESQPFQGQEEHSGTPAPPAQQEALPQAILGKPEKDRASVDTKRAHRAAWAQPTLTPKNVALLRESPHHPRANSDSHD 2016
            MND AVSVGVSEQVV HPSQKQLRELLQMLMGTPAGVVQQVGYLLML VAVVKAGSP TDAGD         TG GNCGSQ QVARSAAGRLRDTTAEERKEAIVLLQTAHKELKKNKTRG GKGGKG MCV+TRS  S+EAKAKGLQ WAAKGKRHVG LQQL L SGVA++GRQDHARLLNFHAKRISSEEAK         FEMMKATIN S+LN+CGEA SADT AAGQRSS  SD+DVGDDDP A KRSN FSERNG GAEN+ISA + PSACADDVMDDD E  PTETMMERP R DAGS QETSA SV GRQMITLDGHMPTVL SGIGGATATV EAARAMAAQGEG+TKDNRMARELKSLRSLGSPHYTIELAGPHDGSD LTLAFANAGLDL+EMLADPHLHEGMSNLDMMRLFGGLV GVLSIHDQGFAHGNINPKSVRVVSGENARWVIRDF SAG V+GKDH+SGGLFFEYLAPEAMAYAT+ECNTPVLLRES+DAYALGQICYQVLARDPMPPLSAETRSVQTEVETRRPTKET+LSPEVFRPPSPLLFREHTVRILAGLLHDDPSERL VRALH+FASFEPLWESQP QGQEEHSGTPAPPAQQEALPQA LG+P+KDRA VDTKRAHRAAWAQ TLT        + P  P   SDS D
Sbjct:    1 MNDTAVSVGVSEQVVRHPSQKQLRELLQMLMGTPAGVVQQVGYLLMLFVAVVKAGSPATDAGDXXXXXXXXXTGDGNCGSQPQVARSAAGRLRDTTAEERKEAIVLLQTAHKELKKNKTRGVGKGGKGGMCVATRSDRSDEAKAKGLQRWAAKGKRHVGQLQQLFLGSGVAMKGRQDHARLLNFHAKRISSEEAKKGSSAAAAAFEMMKATIN-SVLNTCGEATSADTVAAGQRSSDGSDNDVGDDDPLAGKRSNAFSERNGVGAENVISAPTPPSACADDVMDDDSEATPTETMMERPRRGDAGSSQETSAESVTGRQMITLDGHMPTVLVSGIGGATATVPEAARAMAAQGEGVTKDNRMARELKSLRSLGSPHYTIELAGPHDGSDFLTLAFANAGLDLHEMLADPHLHEGMSNLDMMRLFGGLVTGVLSIHDQGFAHGNINPKSVRVVSGENARWVIRDFGSAG-VLGKDHISGGLFFEYLAPEAMAYATKECNTPVLLRESIDAYALGQICYQVLARDPMPPLSAETRSVQTEVETRRPTKETILSPEVFRPPSPLLFREHTVRILAGLLHDDPSERLSVRALHEFASFEPLWESQPSQGQEEHSGTPAPPAQQEALPQATLGEPDKDRALVDTKRAHRAAWAQSTLTDSGSGSNDDEPLPPLV-SDSED 672
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BLAST of mRNA_Ecto-sp13_S_contig7227.18355.1 vs. uniprot
Match: A0A6H5K4P3_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4P3_9PHAE)

HSP 1 Score: 983 bits (2540), Expect = 0.000e+0
Identity = 542/676 (80.18%), Postives = 566/676 (83.73%), Query Frame = 1 
Query:    1 MNDAAVSVGVSEQVVHHPSQKQLRELLQMLMGTPAGVVQQVGYLLMLIVAVVKAGSPVTDAGDGSDGGETGGGNCGSQSQVARSAAGRLRDTTAEERKEAIVLLQTAHKELKKNKTRGAGKGGKGRMCVSTRSGPSNEAKAKGLQTWAAKGKRHVGHLQQLLLRSGVAVRGRQDHARLLNFHAKRISSEEAKXXXXXXXXXFEMMKATINNSILNSCGEAKSADTAAAGQRSSGRSDDDVGDDDPSASKRSNGFSERNGRGAENMISARSLPSACADDVMDDDFETPPTETMMERPPRDDAGSGQETSAASVAGRQMITLDGHMPTVLFSGIGGATATVSEAARAMAAQGEGITKDNRMARELKSLRSLGSPHYTIELAGPHDGSDLLTLAFANAGLDLYEMLADPHLHEGMSNLDMMRLFGGLVNGVLSIHDQGFAHGNINPKSVRVVSGENARWVIRDFDSAGAVIGKDHVSGGLFFEYLAPEAMAYATEECNTPVLLRESVDAYALGQICYQVLARDPMPPLSAETRSVQTEVETRRPTKETVLSPEVFRPPSPLLFREHTVRILAGLLHDDPSERLGVRALHDFASFEPLWESQPFQGQEEHSGTPAPPAQQEALPQAILGKPEKDRASVDTKRAHRAAWAQPTLTPKNVALLRESPHHPRANSDSHDTDDG 2028
            MND AVSVGVS+QVVHHPSQKQLRELLQMLMGTPAGVVQQVG+LLML VAV+KA SP TDAGDGS G  TG GNCGSQ QVARSAA RLRDTTAEERKEAIVLLQTAHKELKKN TRGAGK GKG +CVSTRSGPS+EAKAKGLQ WAAKGKRHVG LQQLLL SG+AV+GRQDHARLLNFHAKRISSEEAK         FEMM +TIN S+LN CGEAKSADT AAGQ SSG SD+DVGDDDP A KRSNGF ERN RGAEN+ISARS PSACADDVMDDD E  PTETMMER PR DAGS QETSA S AGRQMITLDGHMP    +GIGGATAT+ EAARAMAAQG GITKDNRMARELKSL+ LGSPHY IELAG HDGSD LTLAFANA LDL+EMLADP LH GMSNL MM LFGGLVNGV SIH+QGFAHGNINPKSVRVVSG+NARWVIRDFDSAG V+GKDH+S GLFFEYLAPEAMAYATEECNTPVLLR+SVDAYALGQI  QVLARDPMPPLSAET                                   VRI AGLLHD PSERL VRAL++FASFEP WESQP QGQ+EHSGT APPAQQEALPQAILG+PEKDRAS DTKR HRAAWAQPTLTP NVALLRES  HPRANSDSHDTDDG
Sbjct:   11 MNDTAVSVGVSDQVVHHPSQKQLRELLQMLMGTPAGVVQQVGHLLMLFVAVIKADSPATDAGDGSGGXXTGCGNCGSQPQVARSAAARLRDTTAEERKEAIVLLQTAHKELKKNNTRGAGKAGKGGICVSTRSGPSDEAKAKGLQRWAAKGKRHVGQLQQLLLGSGMAVKGRQDHARLLNFHAKRISSEEAKKGSSAAAIAFEMMNSTIN-SVLNICGEAKSADTVAAGQISSGGSDNDVGDDDPLARKRSNGFWERNVRGAENVISARSPPSACADDVMDDDSEATPTETMMERSPRGDAGSSQETSAGSGAGRQMITLDGHMP----NGIGGATATMPEAARAMAAQGAGITKDNRMARELKSLKILGSPHYAIELAGSHDGSDFLTLAFANADLDLHEMLADPQLHGGMSNLGMMSLFGGLVNGVSSIHNQGFAHGNINPKSVRVVSGKNARWVIRDFDSAG-VLGKDHISVGLFFEYLAPEAMAYATEECNTPVLLRKSVDAYALGQIRCQVLARDPMPPLSAET-----------------------------------VRIFAGLLHDIPSERLSVRALNEFASFEPRWESQPSQGQDEHSGTLAPPAQQEALPQAILGEPEKDRASADTKRDHRAAWAQPTLTPNNVALLRESLQHPRANSDSHDTDDG 645
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BLAST of mRNA_Ecto-sp13_S_contig7227.18355.1 vs. uniprot
Match: D7G7C6_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7C6_ECTSI)

HSP 1 Score: 539 bits (1388), Expect = 7.860e-184
Identity = 291/339 (85.84%), Postives = 300/339 (88.50%), Query Frame = 1 
Query:  379 MCVSTRSGPSNEAKAKGLQTWAAKGKRHVGHLQQLLLRSGVAVRGRQDHARLLNFHAKRISSEEAKXXXXXXXXXFEMMKATINNSILNSCGEAKSADTAAAGQRSSGRSDDDVGDDDPSASKRSNGFSERNGRGAENMISARSLPSACADDVMDDDFETPPTETMMERPPRDDAGSGQETSAASVAGRQMITLDGHMPTVLFSGIGGATATVSEAARAMAAQGEGITKDNRMARELKSLRSLGSPHYTIELAGPHDGSDLLTLAFANAGLDLYEMLADPHLHEGMSNLDMMRLFGGLVNGVLSIHDQGFAHGNINPKSVRVVSGENARWVIRDFDSAG 1395
            MCVSTRSGPS+EAKAKGLQ WAAKGKRHVG LQQL L SGVAV+GRQDHARLLNFH KRISSEE K         FEMMKATIN S+LN+CGEA SADTAAAGQRSS  SD+DVGD+DP ASKRSNGFSER G GAEN+ISA S PSACADDV DDD E  PTET M RPPR DAGS Q+TSA SVAGRQMITLDGHMPTVL SGIGGATATV EAARAMAAQGEGITKDNRMARELKSLRSLGSPHYTIELAGPHDGSD LTLAFANAGLDL+EMLADPHLHEGMSNLDMMRLFGGLV GVLSIHDQ FAHGNINPKSVRVVSGENARWVIRDF SAG
Sbjct:    1 MCVSTRSGPSDEAKAKGLQRWAAKGKRHVGQLQQLFLGSGVAVKGRQDHARLLNFHTKRISSEEVKKGSSAAAAAFEMMKATIN-SVLNTCGEATSADTAAAGQRSSDGSDNDVGDEDPLASKRSNGFSERIGVGAENVISAPSPPSACADDVTDDDSEATPTETTMGRPPRGDAGSSQKTSAESVAGRQMITLDGHMPTVLVSGIGGATATVPEAARAMAAQGEGITKDNRMARELKSLRSLGSPHYTIELAGPHDGSDFLTLAFANAGLDLHEMLADPHLHEGMSNLDMMRLFGGLVIGVLSIHDQVFAHGNINPKSVRVVSGENARWVIRDFGSAG 338
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BLAST of mRNA_Ecto-sp13_S_contig7227.18355.1 vs. uniprot
Match: D8LCY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY9_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 7.220e-36
Identity = 114/220 (51.82%), Postives = 136/220 (61.82%), Query Frame = 1 
Query:   22 VGVSEQVVHHPSQKQLRELLQMLMGTPAGVVQQVGYLLMLIVAVVKAGSPVT-DAGDGSDGGETGGGNCGSQS-------QVARSAAGRLRDTT---AEERKEAIVLLQTAHKELKK-NKTRGAGKGG-KGRMCVSTRSGPSNEAKAKGLQTWAAKGKRHVGHLQQLLLRSGVAV-RGRQDHARLLNFHAKRISSEEAKXXXXXXXXXFEMMKATINNSI 639
            VGV E   H P+ KQL ELL +LMGTPAG+VQQVGYLLML VAVVKAG+    D+G GS      GGNCG  +       QVA  AA R R +T   A ERK AI LL+ A KE KK NK RGA K   K   C++  +  S+  KAK LQ WAAKGK++V  L +LLL S  AV + R DHARLL FHA+ ISSEEA+         FE+M   I+ ++
Sbjct:   19 VGVLEPAAHGPTPKQLHELLHILMGTPAGIVQQVGYLLMLFVAVVKAGAAANNDSGAGS------GGNCGDSTVNCRTPGQVAPGAACRTRGSTTVTAAERKSAIALLKAATKEAKKKNKMRGAAKPSIKSGRCLAKATDGSDAVKAKTLQCWAAKGKQNVRQLLKLLLESAGAVGKARPDHARLLKFHAQDISSEEARKGSSAAGAAFELMIGIIDAAL 232
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BLAST of mRNA_Ecto-sp13_S_contig7227.18355.1 vs. uniprot
Match: A0A6H5JXL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXL9_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 8.990e-25
Identity = 87/170 (51.18%), Postives = 105/170 (61.76%), Query Frame = 1 
Query:   22 VGVSEQVVHHPSQKQLRELLQMLMGTPAGVVQQVGYLLMLIVAVVKAGSPVTDAGDGSDGGETGGG--NCGSQSQVARSAAGRLRDTT---AEERKEAIVLLQTAHKELKK-NKTRGAGKGG-KGRMCVSTRSGPSNEAKAKGLQTWAAKGKRHVGHLQQLLLRSGVAVR 510
            V V +   H PS KQL ELL +L+GTPAG+VQQVGYLLML V VVK G+   +    + GG  G    NC +  QVA  AAG+ R +T   A ERK AI LLQ A KE KK NK RGA K   K   C+   +  S+ AKAK LQ WAAKGK++V  L ++LL  G+ VR
Sbjct:   20 VSVLDPAAHGPSPKQLHELLHILIGTPAGIVQQVGYLLMLFVDVVKVGAAANNDSSAASGGNCGDSTANCRTPDQVATGAAGQTRGSTTVTAAERKSAISLLQAATKEAKKKNKMRGAAKASIKSGRCLEKTTDGSDAAKAKTLQCWAAKGKQNVRQLVKILL--GLLVR 187
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BLAST of mRNA_Ecto-sp13_S_contig7227.18355.1 vs. uniprot
Match: D8LNB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB0_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 1.580e-22
Identity = 90/215 (41.86%), Postives = 104/215 (48.37%), Query Frame = 1 
Query:    7 DAAVSVGVSEQVVHHPSQKQLRELLQMLMGTPAGVVQQVGYLLMLIVAVVKAGSPVTDAGDGSDGGETGGGNCGSQSQVARSAAGRLRDTTAEERKEAIVLLQTAHKEL-KKNKTRGAGKGGK-GRMCVSTRSGPSNEAKAKGLQTWAAKGKRHVGHLQQLLLRSGVAVRGRQDHARLLNFHAKRISSEEAKXXXXXXXXXFEMMKATINNSILN 645
            D    VGV  Q    PS KQLRELL +L GTPAG VQQVG+L+ML VAVVK                                            K+AI LLQ A KE+ KK K  GA K GK GR   S R G +   KAK LQ WAAK K +   L QLLL S  A+  R   ARLL  HA+ I SEEA+         F+MM  TI + +L+
Sbjct:   15 DVGGRVGVPGQTAQGPSSKQLRELLHVLKGTPAGAVQQVGHLMMLFVAVVK--------------------------------------------KQAIDLLQHAKKEIHKKKKATGAAKAGKAGRRVTSLRGGTNGAEKAKRLQRWAAKSKTNARQLLQLLLGSRAALEARPGLARLLKLHAQDIISEEARNGSSAAAAAFDMM-ITIIDGVLS 184
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7227.18355.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G7D9_ECTSI0.000e+085.63N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6H5K4P3_9PHAE0.000e+080.18Protein kinase domain-containing protein n=2 Tax=E... [more]
D7G7C6_ECTSI7.860e-18485.84N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
D8LCY9_ECTSI7.220e-3651.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXL9_9PHAE8.990e-2551.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNB0_ECTSI1.580e-2241.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7227contigEcto-sp13_S_contig7227:2305..7650 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size2373
Hectar predicted targeting categoryother localisation
Exons11
Cds size2373
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7227.18355.1prot_Ecto-sp13_S_contig7227.18355.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7227 2305..7650 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463989.984532-CDS-Ecto-sp13_S_contig7227:2304..28831681463989.984532-CDS-Ecto-sp13_S_contig7227:2304..2883Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7227 2305..2883 +
1681463989.9943082-CDS-Ecto-sp13_S_contig7227:3402..35721681463989.9943082-CDS-Ecto-sp13_S_contig7227:3402..3572Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7227 3403..3572 +
1681463990.0033557-CDS-Ecto-sp13_S_contig7227:3829..40591681463990.0033557-CDS-Ecto-sp13_S_contig7227:3829..4059Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7227 3830..4059 +
1681463990.0119493-CDS-Ecto-sp13_S_contig7227:4229..43531681463990.0119493-CDS-Ecto-sp13_S_contig7227:4229..4353Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7227 4230..4353 +
1681463990.0204282-CDS-Ecto-sp13_S_contig7227:4756..49091681463990.0204282-CDS-Ecto-sp13_S_contig7227:4756..4909Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7227 4757..4909 +
1681463990.0291624-CDS-Ecto-sp13_S_contig7227:5133..52731681463990.0291624-CDS-Ecto-sp13_S_contig7227:5133..5273Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7227 5134..5273 +
1681463990.0379646-CDS-Ecto-sp13_S_contig7227:5689..58771681463990.0379646-CDS-Ecto-sp13_S_contig7227:5689..5877Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7227 5690..5877 +
1681463990.0468404-CDS-Ecto-sp13_S_contig7227:6165..62701681463990.0468404-CDS-Ecto-sp13_S_contig7227:6165..6270Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7227 6166..6270 +
1681463990.0557592-CDS-Ecto-sp13_S_contig7227:6730..72151681463990.0557592-CDS-Ecto-sp13_S_contig7227:6730..7215Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7227 6731..7215 +
1681463990.064444-CDS-Ecto-sp13_S_contig7227:7364..75181681463990.064444-CDS-Ecto-sp13_S_contig7227:7364..7518Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7227 7365..7518 +
1681463990.0732915-CDS-Ecto-sp13_S_contig7227:7605..76501681463990.0732915-CDS-Ecto-sp13_S_contig7227:7605..7650Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7227 7606..7650 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7227.18355.1

>prot_Ecto-sp13_S_contig7227.18355.1 ID=prot_Ecto-sp13_S_contig7227.18355.1|Name=mRNA_Ecto-sp13_S_contig7227.18355.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=791bp
MNDAAVSVGVSEQVVHHPSQKQLRELLQMLMGTPAGVVQQVGYLLMLIVA
VVKAGSPVTDAGDGSDGGETGGGNCGSQSQVARSAAGRLRDTTAEERKEA
IVLLQTAHKELKKNKTRGAGKGGKGRMCVSTRSGPSNEAKAKGLQTWAAK
GKRHVGHLQQLLLRSGVAVRGRQDHARLLNFHAKRISSEEAKKGSSAAAA
AFEMMKATINNSILNSCGEAKSADTAAAGQRSSGRSDDDVGDDDPSASKR
SNGFSERNGRGAENMISARSLPSACADDVMDDDFETPPTETMMERPPRDD
AGSGQETSAASVAGRQMITLDGHMPTVLFSGIGGATATVSEAARAMAAQG
EGITKDNRMARELKSLRSLGSPHYTIELAGPHDGSDLLTLAFANAGLDLY
EMLADPHLHEGMSNLDMMRLFGGLVNGVLSIHDQGFAHGNINPKSVRVVS
GENARWVIRDFDSAGAVIGKDHVSGGLFFEYLAPEAMAYATEECNTPVLL
RESVDAYALGQICYQVLARDPMPPLSAETRSVQTEVETRRPTKETVLSPE
VFRPPSPLLFREHTVRILAGLLHDDPSERLGVRALHDFASFEPLWESQPF
QGQEEHSGTPAPPAQQEALPQAILGKPEKDRASVDTKRAHRAAWAQPTLT
PKNVALLRESPHHPRANSDSHDTDDGTEDGNSDAKGDSGTDDDPTSVSGS
DSDRDSDRNSDRDSDSHCDSDSVSGSESDSDSDSGHDSDSGRDSDSDGDS
DRYSNCGCDDDDDDDYDDDDEPPPPLLVDAYLCLEQRAYPR
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mRNA from alignment at Ecto-sp13_S_contig7227:2305..7650+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7227.18355.1 ID=mRNA_Ecto-sp13_S_contig7227.18355.1|Name=mRNA_Ecto-sp13_S_contig7227.18355.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5346bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7227:2305..7650+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAACGACGCCGCCGTCAGTGTCGGCGTCTCGGAGCAGGTCGTCCACCA
CCCATCGCAAAAGCAGCTCCGAGAGCTGCTGCAGATGCTCATGGGCACCC
CGGCCGGCGTTGTGCAACAAGTGGGGTACTTGTTGATGCTCATCGTCGCG
GTTGTCAAGGCCGGCTCGCCCGTCACCGACGCCGGCGACGGCAGCGACGG
AGGCGAAACCGGCGGCGGCAACTGCGGGAGTCAGTCCCAGGTTGCTCGCA
GTGCTGCTGGCCGGCTTCGTGACACCACGGCCGAAGAACGGAAGGAAGCC
ATTGTCCTCCTTCAGACCGCGCACAAGGAGTTGAAGAAGAACAAGACCAG
GGGTGCGGGGAAGGGCGGTAAGGGTAGGATGTGCGTGTCGACCAGAAGCG
GCCCTAGCAACGAAGCCAAGGCGAAAGGACTTCAGACGTGGGCCGCCAAA
GGCAAACGGCACGTTGGACACCTGCAGCAGCTTCTCCTTCGGTCTGGCGT
GGCAGTGAGAGGTCGACAGGACCACGCCCGCCTGCTCAACTTCCACGCAA
AGCGTATCTCCAGCGAGGAGGCCAAGAAGGTAACGGCATCGTTTATTTGA
AGAGTGCGGTCGAGAACAGAGATGGTACACTTTGCCAATATGTCAAACAT
GTTGTGGTCCTCGTGGGCGAATCCCAACCTGGGGTTAGCGCACTCGTCTC
CACTAATTTATCCACTGCTTCTAGCGATCGGAGATAGATAACATTGTTGG
GTATCTGGGGGAAAACCCTGTGGAGAAACCCACGTACGCCCAGGCGCGCA
TATACATGTATTGTCTGTGGACATACATTGTTTGCGTTTGGGAGTTTAGT
CAAGGCTGAAAAATGTTCAAAATTTTCCTTGTCATTTCCCGTGACCGGCA
TCATCTGGCCTATCTATCGAGCCAACAACAGACGTAAGGCAAGCGGTTCC
TCACGTGATTTTGTTCTCGATTAAAACAAGACAAATGTGCACGAGAAACG
CTAGTCTTTGCCAAGAACGAAGCTCATCACTCAGAACGACTTTCCATCTC
CATCTTGATTTCCCTCACATGATGACTGCCTATCATTTGTGGTGGCAGGG
ATCATCGGCCGCGGCAGCCGCCTTCGAGATGATGAAGGCCACCATCAACA
ACAGCATCCTCAACTCATGCGGCGAAGCAAAGTCCGCCGATACGGCAGCG
GCGGGGCAGCGTTCCTCGGGCAGATCGGACGACGACGTTGGCGACGACGA
CCCTTCGGCTAGCAAGCGGTGAGAAGCAGTACAGACTCCAGATACGTCCG
AATCGTTCCACACACCTCCCTCAATGTCGAACTCATTGCCGTTGATTTTG
GTCTGCGCTATCTTTAAATGATGTCGACTGCACCTCCTATCTCTGACCAG
ATTTCTTCAATAGCAGTATCTGCAATTCTGCACGCGCATGCACAAGCAAC
TGCGATCGATTCCCGCCCCCCCTCCGTCCGTTCCCTCCACCACACCGACC
GTTGTTGGCCGCCGCCTCGTGATAGGTCAAACGGCTTCTCGGAACGAAAC
GGGCGGGGCGCGGAAAATATGATCTCCGCCCGGAGTCTCCCGTCGGCGTG
CGCCGATGATGTGATGGACGACGACTTTGAGACGCCACCAACCGAGACGA
TGATGGAACGACCCCCCAGGGATGATGCGGGATCCGGCCAAGAGACTTCG
GCAGCAAGTGTTGCGGGACGACAGATGATCACCCTCGACGGGCACATGCC
CACCGGTAAGAATGGTGTGTTCTTTTCTATTAATCTTCTTTACTCCATCT
ATTTGCCGTCGCTGGCAGCTGTTCACGTCTTATTTTTCTGAACAATTTTA
CTAAACACTATATGTTTACCCTGCAAGACACGTTTACAAGAAGCAATCGC
CCGACTTTTTCTTCCCTTCCCCAAGTGCTCTTCTCCGGCATCGGAGGTGC
TACCGCAACCGTGTCGGAGGCAGCCCGGGCGATGGCCGCTCAGGGAGAGG
GGATCACCAAAGACAACCGGATGGCGCGAGAGCTCAAGTCCCTCAGGAGG
TGAGAGTTGTCTGTCGTATTTTAGGCAGATCGTTCGGCATACACCATATA
TGTTTGCGTGCATACGGCATTGCCCTACGTACACAAGAGTTGCTTGCTCT
CCCATTTTTGTCACTAAGTAGTACTTCTTAGGGTTTGCGGCACCAAGTTG
CACACTTCCTCTACCAAGAAGTCATGGCCCGCAACAACAACTGTCAAGAT
AGCGATGTTCGCTTTTCTGCGAAAGAGAAGTTGGTTCCAGACCTACCGCA
AGCAGTTGCGCAGCGGTTGCATCGGTGGCAGCAAACGCAACAAAATACAG
AAGATAAGTGCGCTGTCGTGGCGACTACACTCTCCCTCCCGGCCCATTGC
TCCGGCCTGCTGCTGCTCTCTGTCCCTCCGTACTCGTTGCATGTACGTGC
AGCCTTGGTTCCCCCCACTACACCATCGAGCTGGCCGGTCCCCACGACGG
CAGCGACCTCCTGACCCTGGCCTTCGCAAACGCCGGCCTCGACCTGTACG
AGATGCTGGCCGATCCGCACCTTCACGAAGGCATGTCCAACCTAGACATG
ATGAGGTGAGCACCGCACGAAAATTAAGGCAAGCAGCCCGTTTGTCCTTG
ATTGTTGGTTGCTTGTTCCCCGACTGCATTTTGATTCCGACGGCTCCTGA
TCATCGTTGAAGTTCGTCGGTCCTACTCGGTACTGAAGTCATTCCTACCC
ATATACATACAAGGTGTTGGGTACTTTTCTTTAACTGCGCATGTTCTGAT
CTGTGTTTTTGCTGGTTCGTCTCCCGCAGGCTCTTTGGAGGTCTCGTCAA
CGGGGTCTTGAGCATCCACGACCAAGGCTTCGCTCACGGCAACATCAACC
CGAAAAGCGTGCGGGTCGTCTCCGGCGAAAACGCGAGATGGGTGATCCGC
GACTTCGACAGTGCTGGAGGTTCGTTGGTTTGGTGTGATAATTTCAAACA
AATCGATCAAGCCATGGACTGCCTACGCAAAGAGAGCAAGTCTATCACGA
AAAATACCAGGCAGGGGGTAGGCAGACCGCAACCATAATCCGAACGCCCA
ACTTAAGCCGATTACATACATTTTCTAGGATGTCTGCTTACTTACAAAAA
ACTGCATGGACTACTGGGTGCAGTACTCCCCACATGACGGCGCTACCCCG
ATGCGTGCTCCCACACGTTGTCTTTCCGTTCCATCCCATCCCATCCCATC
CCATCCTGTCTCATCCCGTCTCATGATATGCCGTCCACTTGCACCACATT
CGCCGGGCGTACTGTATTCTACCGACGACGTTGAACCGGTTCAATTAATG
GCCGACTTCGATGCGTTTGTTCCTTATGCTCTAAGCAGTTATAGGGAAGG
ACCACGTTTCCGGGGGGCTTTTCTTCGAATACCTTGCACCCGAGGCAATG
GCCTACGCCACTGAAGAGTGCAACACCCCCGTCCTTCTCCGGGAGAGTGT
TGACGCCTACGCCCTCGGACAGATATGCTACCAGGTCCTCGCACGCGACC
CCATGCCTCCGCTATCGGCAGAGGTGAGGATGCGTTTTTTGGAGGTTCTA
GATTCTTGCTCAGAGGTTAGATTAATTGTGAGACAGGTCACACCATATTG
TTACCGATATATTGGTCTGTGAGCGTGTGATGTATGACCCATGAACGGCA
AGACAGCCAAAAGAGCAGGACCAGCAGCCACAGCAACTAACAATAGGCAG
CAACACACAACAACCACACCTCAACATTTCATCGTGCTACCTCTCCCCCA
CCCCCCTGTCCTGCTTCTTCTGGTCCGCTTTGGTGCTCCTGCTGTGCATC
GTCGATTTAAGACGAGATCAGTGCAGACGGAGGTTGAGACGCGAAGGCCC
ACCAAGGAAACCGTCTTGAGCCCGGAGGTGTTCAGGCCGCCTTCCCCCCT
CCTGTTTAGGGAGCACGTGAGTCACGACGTGTTTCTGCTGCCCATCTACC
TATCCATGTCCATCTACACCAAGTTCGCCTTGTTGATCGATGCGCAGGGG
GGGGTAGGAGAGACAGCAAAGGGCGGTTTCCTTTCCCCATTATATCTAGC
TCCATTCCTCCCACAACGAACGGGGTGTTTAGATAGTGCTTGAAAGTTGA
TCTCGTCCGGGGCAGAATCGAACCCATACCCAAGCCTCTTTTAGAACTAT
GATTACGACGGCTAACCTTGCTCCGGTTCAACATCGTTTTGTGGTCATCG
TATTAAACCATCGCCAACACCACGCAGCTCTACCGCCTTACCGATAGCTT
CTTCACTTAGACCCTGAACACAACAACGACATCGACACGGGGCTGTGCCT
CCCGGTGCTATTATCGTTCGATGATTCCCAATCGGTCGCCGAATCGCACC
CACGTGACATCTCCTCTGAATTACAGACCGTCCGTATTCTCGCCGGCCTA
CTGCACGACGACCCGTCTGAGCGTCTGGGCGTCCGGGCACTCCACGACTT
CGCCTCATTCGAACCGCTCTGGGAGTCCCAGCCATTCCAAGGGCAGGAGG
AGCACAGCGGCACGCCGGCACCACCAGCTCAGCAGGAGGCATTGCCACAG
GCCATCTTGGGGAAGCCTGAGAAGGATAGGGCCTCGGTGGACACGAAGAG
GGCTCACCGCGCTGCGTGGGCCCAGCCGACCCTCACGCCGAAGAACGTCG
CCCTGCTGCGGGAATCGCCTCATCATCCTCGCGCGAACAGCGACAGCCAT
GACACGGACGACGGCACCGAGGACGGCAACAGCGATGCCAAGGGCGACAG
CGGCACCGATGACGACCCCACCTCTGTGTCCGGCTCCGACTCCGACCGCG
ACTCCGATCGCAACTCCGACCGCGACTCGGACTCACACTGCGACTCCGAC
TCTGTCTCCGGGTCCGACTCCGGCAGCGACGACGACGACAGCGATGCCAA
GGACGGCAGTGAGGAGGAGGAGAGGGACGCGATCATGGTGGTCACAGCGA
CTCCGACTCCGGCTCCGACTCCGGCTCCGACTCCGGTAGCGACTCCCACT
CTGTCTCCAGGTCCGAGTCGGACAGCGACTCCGACTCCGGCCACGACTCC
GACTCAGGCCGCGACTCCGATTCCGACGGCGACTCAGACCGCTACTCCAA
CTGCGGCTGCGACGACGACGACGACGACGACTACGACGACGACGACGAAC
CTCCTCCGCCTTTAGTTAGTCACCCCGATGATGCGTGCTATGACGAAGTG
TGCGTACGTGGTGGCCTTGCTGTTGGCGGCAACAACGGCCGCTCCGACAA
GCTGGTGGACGCCTACCTCTGCCTCGAGCAGAGAGCGTACCCCAGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7227:2305..7650+

>mRNA_Ecto-sp13_S_contig7227.18355.1 ID=mRNA_Ecto-sp13_S_contig7227.18355.1|Name=mRNA_Ecto-sp13_S_contig7227.18355.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2373bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7227:2305..7650+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAACGACGCCGCCGTCAGTGTCGGCGTCTCGGAGCAGGTCGTCCACCA
CCCATCGCAAAAGCAGCTCCGAGAGCTGCTGCAGATGCTCATGGGCACCC
CGGCCGGCGTTGTGCAACAAGTGGGGTACTTGTTGATGCTCATCGTCGCG
GTTGTCAAGGCCGGCTCGCCCGTCACCGACGCCGGCGACGGCAGCGACGG
AGGCGAAACCGGCGGCGGCAACTGCGGGAGTCAGTCCCAGGTTGCTCGCA
GTGCTGCTGGCCGGCTTCGTGACACCACGGCCGAAGAACGGAAGGAAGCC
ATTGTCCTCCTTCAGACCGCGCACAAGGAGTTGAAGAAGAACAAGACCAG
GGGTGCGGGGAAGGGCGGTAAGGGTAGGATGTGCGTGTCGACCAGAAGCG
GCCCTAGCAACGAAGCCAAGGCGAAAGGACTTCAGACGTGGGCCGCCAAA
GGCAAACGGCACGTTGGACACCTGCAGCAGCTTCTCCTTCGGTCTGGCGT
GGCAGTGAGAGGTCGACAGGACCACGCCCGCCTGCTCAACTTCCACGCAA
AGCGTATCTCCAGCGAGGAGGCCAAGAAGGGATCATCGGCCGCGGCAGCC
GCCTTCGAGATGATGAAGGCCACCATCAACAACAGCATCCTCAACTCATG
CGGCGAAGCAAAGTCCGCCGATACGGCAGCGGCGGGGCAGCGTTCCTCGG
GCAGATCGGACGACGACGTTGGCGACGACGACCCTTCGGCTAGCAAGCGG
TCAAACGGCTTCTCGGAACGAAACGGGCGGGGCGCGGAAAATATGATCTC
CGCCCGGAGTCTCCCGTCGGCGTGCGCCGATGATGTGATGGACGACGACT
TTGAGACGCCACCAACCGAGACGATGATGGAACGACCCCCCAGGGATGAT
GCGGGATCCGGCCAAGAGACTTCGGCAGCAAGTGTTGCGGGACGACAGAT
GATCACCCTCGACGGGCACATGCCCACCGTGCTCTTCTCCGGCATCGGAG
GTGCTACCGCAACCGTGTCGGAGGCAGCCCGGGCGATGGCCGCTCAGGGA
GAGGGGATCACCAAAGACAACCGGATGGCGCGAGAGCTCAAGTCCCTCAG
GAGCCTTGGTTCCCCCCACTACACCATCGAGCTGGCCGGTCCCCACGACG
GCAGCGACCTCCTGACCCTGGCCTTCGCAAACGCCGGCCTCGACCTGTAC
GAGATGCTGGCCGATCCGCACCTTCACGAAGGCATGTCCAACCTAGACAT
GATGAGGCTCTTTGGAGGTCTCGTCAACGGGGTCTTGAGCATCCACGACC
AAGGCTTCGCTCACGGCAACATCAACCCGAAAAGCGTGCGGGTCGTCTCC
GGCGAAAACGCGAGATGGGTGATCCGCGACTTCGACAGTGCTGGAGCAGT
TATAGGGAAGGACCACGTTTCCGGGGGGCTTTTCTTCGAATACCTTGCAC
CCGAGGCAATGGCCTACGCCACTGAAGAGTGCAACACCCCCGTCCTTCTC
CGGGAGAGTGTTGACGCCTACGCCCTCGGACAGATATGCTACCAGGTCCT
CGCACGCGACCCCATGCCTCCGCTATCGGCAGAGACGAGATCAGTGCAGA
CGGAGGTTGAGACGCGAAGGCCCACCAAGGAAACCGTCTTGAGCCCGGAG
GTGTTCAGGCCGCCTTCCCCCCTCCTGTTTAGGGAGCACACCGTCCGTAT
TCTCGCCGGCCTACTGCACGACGACCCGTCTGAGCGTCTGGGCGTCCGGG
CACTCCACGACTTCGCCTCATTCGAACCGCTCTGGGAGTCCCAGCCATTC
CAAGGGCAGGAGGAGCACAGCGGCACGCCGGCACCACCAGCTCAGCAGGA
GGCATTGCCACAGGCCATCTTGGGGAAGCCTGAGAAGGATAGGGCCTCGG
TGGACACGAAGAGGGCTCACCGCGCTGCGTGGGCCCAGCCGACCCTCACG
CCGAAGAACGTCGCCCTGCTGCGGGAATCGCCTCATCATCCTCGCGCGAA
CAGCGACAGCCATGACACGGACGACGGCACCGAGGACGGCAACAGCGATG
CCAAGGGCGACAGCGGCACCGATGACGACCCCACCTCTGTGTCCGGCTCC
GACTCCGACCGCGACTCCGATCGCAACTCCGACCGCGACTCGGACTCACA
CTGCGACTCCGACTCTGTCTCCGGGTCCGAGTCGGACAGCGACTCCGACT
CCGGCCACGACTCCGACTCAGGCCGCGACTCCGATTCCGACGGCGACTCA
GACCGCTACTCCAACTGCGGCTGCGACGACGACGACGACGACGACTACGA
CGACGACGACGAACCTCCTCCGCCTTTACTGGTGGACGCCTACCTCTGCC
TCGAGCAGAGAGCGTACCCCAGA
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