mRNA_Ecto-sp13_S_contig72159.18342.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig72159.18342.1 vs. uniprot
Match: D7FVI9_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI9_ECTSI) HSP 1 Score: 75.5 bits (184), Expect = 4.990e-13 Identity = 57/168 (33.93%), Postives = 79/168 (47.02%), Query Frame = 1
Query: 1 TPIMHAAQEGHLSIVRRLCWRGADVTVGDLAVGATVLHLAAKGEHCSVLKALSSAWLDVDVRDHKNETPLFDAVENGQLPATKTLIALGADVNISD---------ATDDRTVLHLAVIGXXXXXXXXXXXXXA-GIDALDDCGATPLMLAATEGQ-LSVVKALLSAGA 471
TP+M AA+ GH+ ++ L +GAD T L G+T + AA G + ++ AL + D D TPL +A G LP KTL+ ADV ++ D+ T LH A G IDA+D G T L LA G+ L +++ LL AGA
Sbjct: 88 TPLMKAAENGHMPVMETLLDQGADATFRHLDDGSTSIIAAALGGYNEIVIALLNKGADKDSPAANGRTPLMEASRKGHLPVVKTLLNADADVTLAAHGLTDEDYCLGDNCTALHFATAGGHLGVVNALLSKGGLEIDAVDTDGTTALHLAVIMGRSLPIMETLLVAGA 255
BLAST of mRNA_Ecto-sp13_S_contig72159.18342.1 vs. uniprot
Match: UPI00201EC82C (uncharacterized protein LOC124152553 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201EC82C) HSP 1 Score: 75.1 bits (183), Expect = 9.110e-13 Identity = 53/159 (33.33%), Postives = 78/159 (49.06%), Query Frame = 1
Query: 1 TPIMHAAQEGHLSIVRRLCWRGADVTVGDLAVGATVLHLAAKGEHCSVLK-ALSSAWLDVDVRDHKNETPLFDAVENGQLPATKTLIALGADVNISDATDDRTVLHLAVIGXXXXXXXXXXXXXA-GIDALDDCGATPLMLAATEGQLSVVKALLSAGA 471
TP+M AA +GH + L +GADVT+ D +LH+A G H ++K LS +D++ R TPL A ENG L+ GA V++ D + +LH+A +G I++ + CG TPLM+AA G V L++ A
Sbjct: 1674 TPLMVAAVKGHRQVFDLLVTQGADVTLVDDGRN-NILHVACLGGHVDMVKYVLSQKIVDINSRGKHGRTPLMVAAENGHRQVFDLLVTRGAGVSLVDQLRNN-ILHVACLGGHVDMAKYIVSQKVTDINSREQCGRTPLMVAAENGHRQVFDLLVTESA 1830
BLAST of mRNA_Ecto-sp13_S_contig72159.18342.1 vs. uniprot
Match: UPI00201F5BBC (inversin-like isoform X1 n=5 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F5BBC) HSP 1 Score: 72.8 bits (177), Expect = 4.760e-12 Identity = 56/159 (35.22%), Postives = 80/159 (50.31%), Query Frame = 1
Query: 1 TPIMHAAQEGHLSIVRRLCWRGADVTVGDLAVGATVLHLAAKGEHCSVLK-ALSSAWLDVDVRDHKNETPLFDAVENGQLPATKTLIALGADVNISDATDDRTVLHLAVIGXXXXXXXXXXXXX-AGIDALDDCGATPLMLAATEGQLSVVKALLSAGA 471
TP+M AA EG + +V+ + GADV++ D G +LH A G +K LS +D + R + TP+ A NGQ + L++ GADV++ D D +LH A IG A I++ TP+M AA GQ VV+ L+S GA
Sbjct: 248 TPVMTAAYEGQVDVVKIMVSEGADVSLVD-EYGDNILHFACVGGDVETVKFMLSLHVVDNNSRGGGSLTPVMKAAWNGQRDVVELLVSEGADVSLVDEVGDN-ILHWACIGGDVETVKFMLSLNVADINSRGRWSRTPVMEAAWNGQRDVVELLVSEGA 404
BLAST of mRNA_Ecto-sp13_S_contig72159.18342.1 vs. uniprot
Match: UPI001EB0643C (ankyrin repeat and KH domain-containing protein 1-like isoform X1 n=2 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB0643C) HSP 1 Score: 72.0 bits (175), Expect = 6.510e-12 Identity = 55/159 (34.59%), Postives = 80/159 (50.31%), Query Frame = 1
Query: 1 TPIMHAAQEGHLSIVRRLCWRGADVTVGDLAVGATVLHLAAKGEHCSVLK-ALSSAWLDVDVRDHKNETPLFDAVENGQLPATKTLIALGADVNISDATDDRTVLHLAVIGXXXXXXXXXXXXX-AGIDALDDCGATPLMLAATEGQLSVVKALLSAGA 471
TP+M AA EG + +V+ + GADV++ D G +L A G +K LS +D++ R + TP+ A NGQ + L++ GADV++ D D +LH A IG A I++ TP+M AA GQ VV+ L+S GA
Sbjct: 127 TPVMTAAYEGQVDVVKIMVSEGADVSLVD-EYGDNILRFACVGGDVETVKFMLSLHVVDINSRGGGSLTPVMKAAWNGQRDVVELLVSEGADVSLVDEVGDN-ILHWACIGGDVETVKFMLSLNVADINSRGRWSRTPVMEAAWNGQRDVVELLVSEGA 283
BLAST of mRNA_Ecto-sp13_S_contig72159.18342.1 vs. uniprot
Match: A0A4W3GXX3_CALMI (SOCS box domain-containing protein n=4 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3GXX3_CALMI) HSP 1 Score: 69.7 bits (169), Expect = 5.930e-11 Identity = 50/145 (34.48%), Postives = 64/145 (44.14%), Query Frame = 1
Query: 4 PIMHAAQEGHLSIVRRLCWRGADVTVGDLAVGATVLHLAAKGEHCSVLKALSSAWLDVDVRDHKNETPLFDAVENGQLPATKTLIALGADVNISDATDDRTVLHLAVIGXXXXXXXXXXXXXAGIDALDDCGATPLMLAATEGQL 438
PI AA HL +R L G T LHLAAK H + L A +D + +N TPLF AVE G L + L+ GA +N ++ +V+H A A +A DD G TPL LAA G+L
Sbjct: 80 PIHEAASRNHLRCLRLLLQTAPSTACIKTFEGETALHLAAKCGHLKNVNCLLKAGIDPNEVTKENTTPLFLAVEKGDLAVIRALLRHGARINGFHSSCLWSVVHQAAYQEHKEVLTFLLEKGADKEARDDYGITPLFLAAQYGKL 224
BLAST of mRNA_Ecto-sp13_S_contig72159.18342.1 vs. uniprot
Match: A0A8C0FN60_BUBBB (KH domain-containing protein n=1 Tax=Bubo bubo TaxID=30461 RepID=A0A8C0FN60_BUBBB) HSP 1 Score: 68.2 bits (165), Expect = 2.350e-10 Identity = 43/112 (38.39%), Postives = 56/112 (50.00%), Query Frame = 1
Query: 1 TPIMHAAQEGHLSIVRRLCWRGADVTVGD-----LAVGATVLHLAAKGEHCSVLKALSSAWLDVDVRDHKNETPLFDAVENGQLPATKTLIALGADVNISDATDDRTVLHLA 321
TP+M AAQEGHL +V+ L G +VG A G T L A + H V L A D++ TPL A G L + LI+ GA+VN + A +D TV+ LA
Sbjct: 421 TPLMEAAQEGHLELVKYLLAAGICRSVGSNVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLA 532
BLAST of mRNA_Ecto-sp13_S_contig72159.18342.1 vs. uniprot
Match: A0A0A9Y2G2_LYGHE (Uncharacterized protein n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Y2G2_LYGHE) HSP 1 Score: 67.4 bits (163), Expect = 4.270e-10 Identity = 51/167 (30.54%), Postives = 79/167 (47.31%), Query Frame = 1
Query: 1 TPIMHAAQEGHLSIVRRLCWRGADVTVGDLAVGATVLHLAAKG------EHCSVLKALSSAWLDVDVRDHKNETPLFDAVENGQLPATKTLIALGADVNISDATDDRTVLHLAVIGXXXXXXXXXXXXXA-----GIDALDDCGATPLMLAATEGQLSVVKALLSAG 468
TPI A + GHLS+ + L GAD+ + G+++LH + + E C + S + VD TPL A E G A K L+ GA ++ + + DR++LH AV+ +D+ G TP++LAA +GQL ++K L+ AG
Sbjct: 1217 TPIHLATERGHLSVAKLLVEAGADMMIKSY--GSSILHFSCRSGDQSLIEWCLKTEHKQSLLICVD---RALRTPLHIAAEGGHFEAVKLLVDAGASISTT-SEGDRSLLHHAVMSGNNLLVEWLIQEGNVRKCFNVDSTMADGRTPILLAAEQGQLDIIKLLIDAG 1377
BLAST of mRNA_Ecto-sp13_S_contig72159.18342.1 vs. uniprot
Match: A0A8C0C4B5_9AVES (KH domain-containing protein n=1 Tax=Buteo japonicus TaxID=224669 RepID=A0A8C0C4B5_9AVES) HSP 1 Score: 66.6 bits (161), Expect = 8.050e-10 Identity = 43/114 (37.72%), Postives = 56/114 (49.12%), Query Frame = 1
Query: 1 TPIMHAAQEGHLSIVRRLCWRGADVTVG-------DLAVGATVLHLAAKGEHCSVLKALSSAWLDVDVRDHKNETPLFDAVENGQLPATKTLIALGADVNISDATDDRTVLHLA 321
TP+M AAQEGHL +V+ L G +VG A G T L A + H V L A D++ TPL A G L + LI+ GA+VN + A +D TV+ LA
Sbjct: 360 TPLMEAAQEGHLELVKYLLAAGNCWSVGYRANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLA 473
BLAST of mRNA_Ecto-sp13_S_contig72159.18342.1 vs. uniprot
Match: A0A8C0C1F0_9AVES (KH domain-containing protein n=1 Tax=Buteo japonicus TaxID=224669 RepID=A0A8C0C1F0_9AVES) HSP 1 Score: 66.6 bits (161), Expect = 8.050e-10 Identity = 43/114 (37.72%), Postives = 56/114 (49.12%), Query Frame = 1
Query: 1 TPIMHAAQEGHLSIVRRLCWRGADVTVG-------DLAVGATVLHLAAKGEHCSVLKALSSAWLDVDVRDHKNETPLFDAVENGQLPATKTLIALGADVNISDATDDRTVLHLA 321
TP+M AAQEGHL +V+ L G +VG A G T L A + H V L A D++ TPL A G L + LI+ GA+VN + A +D TV+ LA
Sbjct: 421 TPLMEAAQEGHLELVKYLLAAGNCWSVGYRANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLA 534
BLAST of mRNA_Ecto-sp13_S_contig72159.18342.1 vs. uniprot
Match: A0A663EKX7_AQUCH (KH domain-containing protein n=1 Tax=Aquila chrysaetos chrysaetos TaxID=223781 RepID=A0A663EKX7_AQUCH) HSP 1 Score: 66.6 bits (161), Expect = 8.070e-10 Identity = 43/114 (37.72%), Postives = 56/114 (49.12%), Query Frame = 1
Query: 1 TPIMHAAQEGHLSIVRRLCWRGADVTVG-------DLAVGATVLHLAAKGEHCSVLKALSSAWLDVDVRDHKNETPLFDAVENGQLPATKTLIALGADVNISDATDDRTVLHLA 321
TP+M AAQEGHL +V+ L G +VG A G T L A + H V L A D++ TPL A G L + LI+ GA+VN + A +D TV+ LA
Sbjct: 528 TPLMEAAQEGHLELVKYLLAAGNCWSVGYRANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLA 641 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig72159.18342.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig72159.18342.1 >prot_Ecto-sp13_S_contig72159.18342.1 ID=prot_Ecto-sp13_S_contig72159.18342.1|Name=mRNA_Ecto-sp13_S_contig72159.18342.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=154bp MHAAQEGHLSIVRRLCWRGADVTVGDLAVGATVLHLAAKGEHCSVLKALSback to top mRNA from alignment at Ecto-sp13_S_contig72159:10..591+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig72159.18342.1 ID=mRNA_Ecto-sp13_S_contig72159.18342.1|Name=mRNA_Ecto-sp13_S_contig72159.18342.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=582bp|location=Sequence derived from alignment at Ecto-sp13_S_contig72159:10..591+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig72159:10..591+ >mRNA_Ecto-sp13_S_contig72159.18342.1 ID=mRNA_Ecto-sp13_S_contig72159.18342.1|Name=mRNA_Ecto-sp13_S_contig72159.18342.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=462bp|location=Sequence derived from alignment at Ecto-sp13_S_contig72159:10..591+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |