mRNA_Ecto-sp13_S_contig7151.18258.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7151.18258.1
Unique NamemRNA_Ecto-sp13_S_contig7151.18258.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7151.18258.1 vs. uniprot
Match: A0A6H5KXP8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXP8_9PHAE)

HSP 1 Score: 545 bits (1404), Expect = 8.740e-195
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 1 
Query:    1 MGEQLKFRGQLVAHEDWVTSIAATSENPDMIVSSSRDKSIIVWKLQRGEDQYGYPHRSLTGHSHFVSEVVISSDGQFALSGSWDGTLRLWEIQSGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKYTIQEDGHTEWVSCVRFSPSPSAPVIVSAGWDKLVKVWALSNCKLHTNLIGHTGYLNTVTVSPDGSLCASGGKDGTAMLWDLKEGKRLYSLDAGDIIHSLVFSPNRYWLCAATTAGIKIWDLESKVVVDELRPEFPEVSMKAIVPYCTCLCWSNNGSILYSG 903
            MGEQLKFRGQLVAHEDWVTSIAATSENPDMIVSSSRDKSIIVWKLQRGEDQYGYPHRSLTGHSHFVSEVVISSDGQFALSGSWDGTLRLWEIQSGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKYTIQEDGHTEWVSCVRFSPSPSAPVIVSAGWDKLVKVWALSNCKLHTNLIGHTGYLNTVTVSPDGSLCASGGKDGTAMLWDLKEGKRLYSLDAGDIIHSLVFSPNRYWLCAATTAGIKIWDLESKVVVDELRPEFPEVSMKAIVPYCTCLCWSNNGSILYSG
Sbjct:    1 MGEQLKFRGQLVAHEDWVTSIAATSENPDMIVSSSRDKSIIVWKLQRGEDQYGYPHRSLTGHSHFVSEVVISSDGQFALSGSWDGTLRLWEIQSGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKYTIQEDGHTEWVSCVRFSPSPSAPVIVSAGWDKLVKVWALSNCKLHTNLIGHTGYLNTVTVSPDGSLCASGGKDGTAMLWDLKEGKRLYSLDAGDIIHSLVFSPNRYWLCAATTAGIKIWDLESKVVVDELRPEFPEVSMKAIVPYCTCLCWSNNGSILYSG 301
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7151.18258.1 vs. uniprot
Match: A0A835Z8M3_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8M3_9STRA)

HSP 1 Score: 471 bits (1212), Expect = 1.580e-165
Identity = 261/302 (86.42%), Postives = 277/302 (91.72%), Query Frame = 1 
Query:    1 MGEQLKFRGQLVAHEDWVTSIAATSENPDMIVSSSRDKSIIVWKLQR-GEDQYGYPHRSLTGHSHFVSEVVISSDGQFALSGSWDGTLRLWEIQSGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKYTIQEDGHTEWVSCVRFSPSPSAPVIVSAGWDKLVKVWALSNCKLHTNLIGHTGYLNTVTVSPDGSLCASGGKDGTAMLWDLKEGKRLYSLDAGDIIHSLVFSPNRYWLCAATTAGIKIWDLESKVVVDELRPEFPEVSMKAIVPYCTCLCWSNNGSILYSG 903
            MGEQLK RG L AHEDWVTSIAAT E+ +MI+SSSRDKSIIVW L R  +D YG+P R+LTGHSHFVSEVVISSDGQFALSGSWDGTLRLWEI +GRT   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKYTIQ++GHTEWVSCVRFSPSPSAPVIVSAGWDKLVKVW+LSNCKL TNL+GH GYLNTVTVSPDGSLCASGGKDGTAMLWDL EGKRLYSLDAGD IHSLVFSPNRYWLCAATT GIKIWDLESKVVVD+LRPEF + S KA +P+CTCLCW+ NGSILYSG
Sbjct:    1 MGEQLKLRGTLKAHEDWVTSIAATGEDDNMILSSSRDKSIIVWTLTREADDDYGFPRRALTGHSHFVSEVVISSDGQFALSGSWDGTLRLWEINTGRTTRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKYTIQDEGHTEWVSCVRFSPSPSAPVIVSAGWDKLVKVWSLSNCKLRTNLVGHNGYLNTVTVSPDGSLCASGGKDGTAMLWDLNEGKRLYSLDAGDTIHSLVFSPNRYWLCAATTQGIKIWDLESKVVVDDLRPEFEQKSPKATIPHCTCLCWAANGSILYSG 302
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7151.18258.1 vs. uniprot
Match: A0A6U1PCN7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PCN7_9STRA)

HSP 1 Score: 450 bits (1157), Expect = 3.590e-157
Identity = 246/301 (81.73%), Postives = 267/301 (88.70%), Query Frame = 1 
Query:    1 MGEQLKFRGQLVAHEDWVTSIAATSENPDMIVSSSRDKSIIVWKLQRGEDQYGYPHRSLTGHSHFVSEVVISSDGQFALSGSWDGTLRLWEIQSGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKYTIQEDGHTEWVSCVRFSPSPSAPVIVSAGWDKLVKVWALSNCKLHTNLIGHTGYLNTVTVSPDGSLCASGGKDGTAMLWDLKEGKRLYSLDAGDIIHSLVFSPNRYWLCAATTAGIKIWDLESKVVVDELRPEFPEVSMKAIVPYCTCLCWSNNGSILYSG 903
            MGEQL  RG L  HE+WVTSIA TSENP+MI+SSSRDKS++VW + R E  YGYP RSL GHSHFVS+VVISSDGQFALSGSWDGTLRLWEI+SG++     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLG CKYTI+E+GHTEWVSCVRFSPS +APVIVSAGWDKLVKVW+L++CKL TNLIGH+GYLNTVTVSPDGSLCASGGKDGTAMLWDL EGKRLYSL AGDIIHSLVFSPNRYWLCAATT GIKIWDLESKVVVDEL PEF      A +P+CT LCWS +GS+LYSG
Sbjct:    1 MGEQLTLRGSLTGHENWVTSIATTSENPNMILSSSRDKSVLVWNVTRDELAYGYPRRSLQGHSHFVSDVVISSDGQFALSGSWDGTLRLWEIESGKSTKQFIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGHCKYTIEEEGHTEWVSCVRFSPSATAPVIVSAGWDKLVKVWSLTDCKLRTNLIGHSGYLNTVTVSPDGSLCASGGKDGTAMLWDLNEGKRLYSLPAGDIIHSLVFSPNRYWLCAATTQGIKIWDLESKVVVDELVPEFTATGKNATIPFCTSLCWSADGSVLYSG 301
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7151.18258.1 vs. uniprot
Match: F0YBV9_AURAN (Uncharacterized protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YBV9_AURAN)

HSP 1 Score: 436 bits (1121), Expect = 1.200e-151
Identity = 238/306 (77.78%), Postives = 263/306 (85.95%), Query Frame = 1 
Query:    1 MGEQLKFRGQLVAHEDWVTSIAATSENPDMIVSSSRDKSIIVWKLQRGE-----DQYGYPHRSLTGHSHFVSEVVISSDGQFALSGSWDGTLRLWEIQSGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKYTIQEDGHTEWVSCVRFSPSPSAPVIVSAGWDKLVKVWALSNCKLHTNLIGHTGYLNTVTVSPDGSLCASGGKDGTAMLWDLKEGKRLYSLDAGDIIHSLVFSPNRYWLCAATTAGIKIWDLESKVVVDELRPEFPEVSMKAIVPYCTCLCWSNNGSILYSG 903
            M E L  RG L  H DWVTSIA TSE+P MI+SSSRDK++++W L  G      + YGYP R+L GHSHFVS+VVISSDGQFALSGSWDGTLRLWE+ +G+T    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKYTI ++GHTEWVSCVRFSPS  APVIVS GWDKLVKVW+L+NCKL TNL GH GYLNTVTVSPDGSLCASGGKDGTAMLWDL EGKRLYSLDAGD+IHSLVFSPNRYWLCAATT G+KIWDLESKVVVDEL+PEFP +   A  PYCTC+CWS +G++L+SG
Sbjct:    1 MAEALTLRGTLKGHSDWVTSIATTSEDPSMILSSSRDKTVLLWALTAGGGSAEGEAYGYPRRALKGHSHFVSDVVISSDGQFALSGSWDGTLRLWELATGKTTRRFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKYTISDEGHTEWVSCVRFSPSVQAPVIVSCGWDKLVKVWSLTNCKLRTNLYGHNGYLNTVTVSPDGSLCASGGKDGTAMLWDLNEGKRLYSLDAGDVIHSLVFSPNRYWLCAATTLGVKIWDLESKVVVDELKPEFPAMGKNATPPYCTCICWSADGAVLFSG 306
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7151.18258.1 vs. uniprot
Match: A0A6T5NED6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5NED6_HETAK)

HSP 1 Score: 434 bits (1116), Expect = 6.220e-151
Identity = 239/301 (79.40%), Postives = 261/301 (86.71%), Query Frame = 1 
Query:    1 MGEQLKFRGQLVAHEDWVTSIAATSENPDMIVSSSRDKSIIVWKLQRGEDQYGYPHRSLTGHSHFVSEVVISSDGQFALSGSWDGTLRLWEIQSGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKYTIQEDGHTEWVSCVRFSPSPSAPVIVSAGWDKLVKVWALSNCKLHTNLIGHTGYLNTVTVSPDGSLCASGGKDGTAMLWDLKEGKRLYSLDAGDIIHSLVFSPNRYWLCAATTAGIKIWDLESKVVVDELRPEFPEVSMKAIVPYCTCLCWSNNGSILYSG 903
            MGEQL  RG L  HE WVTS+A T+E+P+MI+SSSRDK++ +W L R  D YGYP RS+TGHSHFVS+VVISSDGQFALSGSWDGTLRLWE+ +GRT    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKYT+ E+GHTEWVSCVRFSPSP APV+VSAGWDKLVKVW+L+NCKL TNLIGHTGYL T TVSPDGSLCASGGKDGTAMLWDL E KRLYSL AGDII++LVFSPNRYWLCAATT  IKIWDLE K VVDEL PE P +   A VPYCT LCWS +GS+LYSG
Sbjct:    1 MGEQLTLRGTLEGHEGWVTSLATTAEDPNMILSSSRDKTVCMWSLTRDGDSYGYPRRSMTGHSHFVSDVVISSDGQFALSGSWDGTLRLWELATGRTARRFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKYTMSEEGHTEWVSCVRFSPSPQAPVVVSAGWDKLVKVWSLTNCKLSTNLIGHTGYLTTATVSPDGSLCASGGKDGTAMLWDLNECKRLYSLPAGDIINALVFSPNRYWLCAATTQCIKIWDLECKEVVDELVPEMPALGKNATVPYCTSLCWSADGSVLYSG 301
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7151.18258.1 vs. uniprot
Match: A0A7S2FMH3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FMH3_9STRA)

HSP 1 Score: 428 bits (1101), Expect = 1.950e-148
Identity = 234/301 (77.74%), Postives = 261/301 (86.71%), Query Frame = 1 
Query:    1 MGEQLKFRGQLVAHEDWVTSIAATSENPDMIVSSSRDKSIIVWKLQRGEDQYGYPHRSLTGHSHFVSEVVISSDGQFALSGSWDGTLRLWEIQSGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKYTIQEDGHTEWVSCVRFSPSPSAPVIVSAGWDKLVKVWALSNCKLHTNLIGHTGYLNTVTVSPDGSLCASGGKDGTAMLWDLKEGKRLYSLDAGDIIHSLVFSPNRYWLCAATTAGIKIWDLESKVVVDELRPEFPEVSMKAIVPYCTCLCWSNNGSILYSG 903
            MGE L  RG L  H DWVTSIA T E+  +I+SSSRDK+I+VW++   E+QYG+P +SL GHSHFVS VVIS DGQFALSGSWDGTLRLWEI SGRT     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKYTI ++GHTEWVSCVRFSPS +APVIVS GWDKLVKVW+L+NC+L TNL+GHTGYLNTVTVSPDGSLCASGGKDGTAMLWDL EGKRLYSLDAGDII++LVFSPNRYWLCAATT+ IKIWDLESK+VVDEL P+F  +   A  PYCTC+CWS +G+ L+SG
Sbjct:   16 MGETLTLRGTLTGHADWVTSIATTGEDTSLILSSSRDKTILVWQVDGREEQYGFPKKSLCGHSHFVSGVVISVDGQFALSGSWDGTLRLWEISSGRTTRRFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKYTIVDEGHTEWVSCVRFSPSATAPVIVSCGWDKLVKVWSLANCRLRTNLVGHTGYLNTVTVSPDGSLCASGGKDGTAMLWDLNEGKRLYSLDAGDIINALVFSPNRYWLCAATTSCIKIWDLESKIVVDELVPDFANLGPNAQTPYCTCICWSYDGATLFSG 316
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7151.18258.1 vs. uniprot
Match: A0A7S2F795_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F795_9STRA)

HSP 1 Score: 426 bits (1095), Expect = 1.490e-147
Identity = 232/301 (77.08%), Postives = 261/301 (86.71%), Query Frame = 1 
Query:    1 MGEQLKFRGQLVAHEDWVTSIAATSENPDMIVSSSRDKSIIVWKLQRGEDQYGYPHRSLTGHSHFVSEVVISSDGQFALSGSWDGTLRLWEIQSGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKYTIQEDGHTEWVSCVRFSPSPSAPVIVSAGWDKLVKVWALSNCKLHTNLIGHTGYLNTVTVSPDGSLCASGGKDGTAMLWDLKEGKRLYSLDAGDIIHSLVFSPNRYWLCAATTAGIKIWDLESKVVVDELRPEFPEVSMKAIVPYCTCLCWSNNGSILYSG 903
            MGEQL  RG L  H DWVT+IA T+E+  M++SSSRD+S++VW++   +++YG+P +SL GHSHFVS VVISSDGQFALSGSWDG+LRLWEI +GRT     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKYTI E+GHTEWVSCVRFSPS +APVIVS GWDKLVKVW+LSNC+L T+L GHTGYLNTVTVSPDGSLCASGGKDGTAMLWDL EGKRLYSLDAGDIIHSLVFSPNRYWLCAAT++ IKIWDLESK+VVDEL PEF        +PYC CLCWS +G+ L+SG
Sbjct:   13 MGEQLTLRGTLEGHSDWVTAIATTNEDATMVLSSSRDRSVLVWQVDGTQEEYGFPRKSLRGHSHFVSSVVISSDGQFALSGSWDGSLRLWEIATGRTTRRFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKYTIIEEGHTEWVSCVRFSPSQTAPVIVSCGWDKLVKVWSLSNCRLRTDLAGHTGYLNTVTVSPDGSLCASGGKDGTAMLWDLNEGKRLYSLDAGDIIHSLVFSPNRYWLCAATSSCIKIWDLESKIVVDELVPEFAAPPKNGQIPYCLCLCWSYDGATLFSG 313
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7151.18258.1 vs. uniprot
Match: A0A7S0S0E2_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0S0E2_9CHLO)

HSP 1 Score: 411 bits (1057), Expect = 6.070e-142
Identity = 230/302 (76.16%), Postives = 251/302 (83.11%), Query Frame = 1 
Query:    1 MGEQLKFRGQLVAHEDWVTSIAATSENPDMIVSSSRDKSIIVWKLQRGEDQYGYPHRSLTGHSHFVSEVVISSDGQFALSGSWDGTLRLWEIQSGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKYTIQE-DGHTEWVSCVRFSPSPSAPVIVSAGWDKLVKVWALSNCKLHTNLIGHTGYLNTVTVSPDGSLCASGGKDGTAMLWDLKEGKRLYSLDAGDIIHSLVFSPNRYWLCAATTAGIKIWDLESKVVVDELRPEFPEVSMKAIVPYCTCLCWSNNGSILYSG 903
            M E L  RG L  H+DWVTSIA   +N DMI+SSSRDKS+I+W L R E  YGYP R+L GH HFV +VVISSDGQFALSGSWDGTLRLW++ +G T     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKYTIQE DGH+EWVSCVRFSP  S P+IVSAGWDKLVKVW L+NCKL TNL+GHTGY+NTVTVSPDGSLCASGGKDG AMLWDL EGKRLYSLDAGDIIH L FSPNRYWLCAAT + +KIWDLESK VVDELRPE P V  K++  YC  L WS +GS LY+G
Sbjct:    1 MAETLSLRGTLKGHDDWVTSIACPLDNSDMILSSSRDKSVIMWSLTRQEHSYGYPRRALRGHGHFVQDVVISSDGQFALSGSWDGTLRLWDLNTGTTTRRFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKYTIQEQDGHSEWVSCVRFSPVTSNPIIVSAGWDKLVKVWNLTNCKLRTNLVGHTGYINTVTVSPDGSLCASGGKDGVAMLWDLAEGKRLYSLDAGDIIHCLCFSPNRYWLCAATQSCVKIWDLESKSVVDELRPEMPPVGKKSLQAYCLSLNWSADGSTLYTG 302
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7151.18258.1 vs. uniprot
Match: K8EQC7_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EQC7_9CHLO)

HSP 1 Score: 405 bits (1042), Expect = 1.200e-139
Identity = 230/300 (76.67%), Postives = 256/300 (85.33%), Query Frame = 1 
Query:    7 EQLKFRGQLVAHEDWVTSIAATSENPDMIVSSSRDKSIIVWKLQRGEDQYGYPHRSLTGHSHFVSEVVISSDGQFALSGSWDGTLRLWEIQSGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKYTIQE-DGHTEWVSCVRFSPSPSAPVIVSAGWDKLVKVWALSNCKLHTNLIGHTGYLNTVTVSPDGSLCASGGKDGTAMLWDLKEGKRLYSLDAGDIIHSLVFSPNRYWLCAATTAGIKIWDLESKVVVDELRPEFPEVSMKAIVPYCTCLCWSNNGSILYSG 903
            E L  RG L  HE WVTSIA   +N D++++SSRDKS+I+W L R E  YGYP R L GHSHFV +VVISSDGQFALSGSWDGTLRLW++ SG  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKYTIQE +GHTEWVSCVRFSP+PS P+IVS GWDKLVKVW L+NCKL TNL+GHTGY+NTVTVSPDGSLCASGGKDG AMLWDL EGKRLYSLDAGDII+S+ FSPNRYWLCAAT + +KIWDLESK +VDEL PEFP V  K++ P+CT L WS +G  LY+G
Sbjct:    2 ETLTLRGVLEGHEGWVTSIATPLDNSDILLTSSRDKSVILWTLTREEGNYGYPRRRLHGHSHFVQDVVISSDGQFALSGSWDGTLRLWDLNSGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKYTIQEHEGHTEWVSCVRFSPAPSNPIIVSCGWDKLVKVWNLNNCKLRTNLVGHTGYINTVTVSPDGSLCASGGKDGVAMLWDLAEGKRLYSLDAGDIIYSMCFSPNRYWLCAATQSCVKIWDLESKSIVDELHPEFPPVGKKSMPPHCTSLQWSADGQTLYTG 301
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7151.18258.1 vs. uniprot
Match: W7TVV4_9STRA (Guanine nucleotide binding protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVV4_9STRA)

HSP 1 Score: 405 bits (1040), Expect = 2.100e-139
Identity = 225/303 (74.26%), Postives = 257/303 (84.82%), Query Frame = 1 
Query:    1 MGEQLKFRGQLVAHEDWVTSIAATSENPDMIVSSSRDKSIIVWKLQRGEDQYGYPHRSLTGHSHFVSEVVISSDGQFALSGSWDGTLRLWEIQSGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKYTIQEDGHTEWVSCVRFSPSPSAPVIVSAGWDKLVKVWALSNCKLHTNLIGHTGYLNTVTVSPDGSLCASGGKDGTAMLWDLKEGKRLYSLDAGDIIHSLVFSPNRYWLCAATTAGIKIWDLESKVVVDELRPEFPEVSMKAIVP--YCTCLCWSNNGSILYSG 903
            MG+QL  R +L  H  WVTSIA  ++NP++++SSSRDK+++VW L  GED YGYP R+L GH HFVS+V+ISSDGQFALSGSWDGTLRLWEI++G++     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECK+TI E GH+EWVSCVRFSPSP+APVIVS GWDK VKVW L++CKL  NLIGHTGYLN VTVSPDGSLCASGGKDGTAMLWDL EGKRLYSLDAGDIIHSLVFSPNRYWLCAAT+ GIKIWDLESK +VD L+P++P     ++ P  YCT L WS +G  L+SG
Sbjct:    1 MGDQLSLRAELKGHAGWVTSIATHADNPNLVLSSSRDKTVMVWNLTGGED-YGYPQRALRGHGHFVSDVIISSDGQFALSGSWDGTLRLWEIKTGKSTRTFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLGECKFTITEGGHSEWVSCVRFSPSPTAPVIVSCGWDKRVKVWNLADCKLKQNLIGHTGYLNVVTVSPDGSLCASGGKDGTAMLWDLNEGKRLYSLDAGDIIHSLVFSPNRYWLCAATSQGIKIWDLESKDMVDHLQPKWPVQGKHSLSPQPYCTSLAWSADGQTLFSG 302
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7151.18258.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXP8_9PHAE8.740e-195100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z8M3_9STRA1.580e-16586.42WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A6U1PCN7_9STRA3.590e-15781.73Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0YBV9_AURAN1.200e-15177.78Uncharacterized protein n=2 Tax=Pelagomonadales Ta... [more]
A0A6T5NED6_HETAK6.220e-15179.40Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2FMH3_9STRA1.950e-14877.74Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2F795_9STRA1.490e-14777.08Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S0S0E2_9CHLO6.070e-14276.16Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
K8EQC7_9CHLO1.200e-13976.67Uncharacterized protein n=1 Tax=Bathycoccus prasin... [more]
W7TVV4_9STRA2.100e-13974.26Guanine nucleotide binding protein n=2 Tax=Monodop... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7151contigEcto-sp13_S_contig7151:2098..6692 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score436.8
Seed ortholog evalue8.2e-120
Seed eggNOG ortholog44056.XP_009037831.1
Preferred nameLACK1
Model size906
KEGG koko:K14753
KEGG Pathwayko05162,map05162
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000122,GO:0000429,GO:0000430,GO:0000433,GO:0000988,GO:0000989,GO:0001076,GO:0001191,GO:0001196,GO:0001198,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006323,GO:0006325,GO:0006333,GO:0006338,GO:0006355,GO:0006357,GO:0006996,GO:0007154,GO:0007530,GO:0007531,GO:0007532,GO:0007584,GO:0008150,GO:0008289,GO:0009605,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010565,GO:0010570,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016020,GO:0016043,GO:0016584,GO:0017053,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0019899,GO:0022414,GO:0022607,GO:0030154,GO:0030587,GO:0031252,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031497,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0032502,GO:0032879,GO:0032991,GO:0034728,GO:0035091,GO:0035950,GO:0035952,GO:0035953,GO:0035955,GO:0036033,GO:0040008,GO:0042221,GO:0042304,GO:0042393,GO:0042802,GO:0042803,GO:0042826,GO:0043044,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043486,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045013,GO:0045014,GO:0045165,GO:0045892,GO:0045893,GO:0045894,GO:0045934,GO:0045935,GO:0045944,GO:0045990,GO:0046015,GO:0046890,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051051,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051703,GO:0051704,GO:0051716,GO:0060255,GO:0061984,GO:0061985,GO:0061986,GO:0061987,GO:0062012,GO:0065007,GO:0070784,GO:0070887,GO:0071103,GO:0071496,GO:0071824,GO:0071840,GO:0071944,GO:0072364,GO:0080025,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090088,GO:0090089,GO:0090702,GO:0099120,GO:0140110,GO:1900428,GO:1901981,GO:1902679,GO:1902680,GO:1902936,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2000217,GO:2000531,GO:2000877,GO:2000879,GO:2001020,GO:2001141
Exons6
EggNOG free text desc.positive regulation of Golgi to plasma membrane protein transport
EggNOG OGsKOG0279@1,KOG0279@2759
Cds size906
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7151.18258.1prot_Ecto-sp13_S_contig7151.18258.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7151 2098..6692 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463980.3458745-CDS-Ecto-sp13_S_contig7151:2097..22321681463980.3458745-CDS-Ecto-sp13_S_contig7151:2097..2232Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7151 2098..2232 -
1681463980.3600154-CDS-Ecto-sp13_S_contig7151:2733..29261681463980.3600154-CDS-Ecto-sp13_S_contig7151:2733..2926Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7151 2734..2926 -
1681463980.3694363-CDS-Ecto-sp13_S_contig7151:3322..34651681463980.3694363-CDS-Ecto-sp13_S_contig7151:3322..3465Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7151 3323..3465 -
1681463980.380421-CDS-Ecto-sp13_S_contig7151:4648..48471681463980.380421-CDS-Ecto-sp13_S_contig7151:4648..4847Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7151 4649..4847 -
1681463980.3913054-CDS-Ecto-sp13_S_contig7151:5888..60461681463980.3913054-CDS-Ecto-sp13_S_contig7151:5888..6046Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7151 5889..6046 -
1681463980.4011536-CDS-Ecto-sp13_S_contig7151:6614..66921681463980.4011536-CDS-Ecto-sp13_S_contig7151:6614..6692Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7151 6615..6692 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7151.18258.1

>prot_Ecto-sp13_S_contig7151.18258.1 ID=prot_Ecto-sp13_S_contig7151.18258.1|Name=mRNA_Ecto-sp13_S_contig7151.18258.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=302bp
MGEQLKFRGQLVAHEDWVTSIAATSENPDMIVSSSRDKSIIVWKLQRGED
QYGYPHRSLTGHSHFVSEVVISSDGQFALSGSWDGTLRLWEIQSGRTTRR
FVGHAKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGECKYTIQEDGHTEW
VSCVRFSPSPSAPVIVSAGWDKLVKVWALSNCKLHTNLIGHTGYLNTVTV
SPDGSLCASGGKDGTAMLWDLKEGKRLYSLDAGDIIHSLVFSPNRYWLCA
ATTAGIKIWDLESKVVVDELRPEFPEVSMKAIVPYCTCLCWSNNGSILYS
G*
back to top

mRNA from alignment at Ecto-sp13_S_contig7151:2098..6692-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7151.18258.1 ID=mRNA_Ecto-sp13_S_contig7151.18258.1|Name=mRNA_Ecto-sp13_S_contig7151.18258.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4595bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7151:2098..6692- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGAGAGCAACTCAAGTTTCGCGGCCAGCTGGTGGCACACGAGGACTG
GGTCACGTCCATCGCGGCCACCTCGGAGGTGAGAGAGAAGTCAGCCCACC
CAAGGAAAATGGCAAATATCATTTGAACAAAGGTTTGACCGTGTATGTAT
CCTGCCTCCCCATTGGGTGTATGTGGACGTGCGGACGGGACCGCCCGTAG
CACAGCAGCTAGACAGATGGAGGATCGTCCTAGTCTTTGAGGTGGGGATG
CCATCAGTTTACCTATATTCGCATGGTTTGCAGTTGGCAAAGACGCATTT
TTTCCGGCAGTGAAGAGCCGATTAGAGAAGCCCTGCTGGGTTGAAAGTCA
CGAAAAAACCCCAATGTGAAGGTACTGCTGGAAGGAGATGTTGGGTGACT
GATTGCCGTGTCGAGCAACAAAACCAAACATGAAGACTCTGTTCCGCCGT
AAGCATAGACGACATTGTTTTATTAAACATGCTTTTTTTGCGTTTGTTTT
CATTCTTCATGGTTTTCAAACAGAACCCGGACATGATCGTGTCCTCGTCC
CGCGACAAGAGCATCATCGTCTGGAGCATAGACGACATTGTTTTATTAAA
CATGCTTTTTTTGCGTTTGTTTTCATTCCTCATGGTTTTCAAACAGAACC
CGGACATGATCGTGTCCTCGTCCCGCGACAAGAGCATCATCGTCTGGAAG
CTCCAGCGCGGGGAGGACCAGTACGGCTACCCCCACCGCTCGCTCACCGG
CCACTCCCACTTCGTGTCTGAGGTCGTTATCTCCTCCGATGGACAGTTCG
CGCTGTGAGTTCAGATTGATCGAGGTCTGTCTGGACATGACTGCTGCTGC
GCGGGCGGATGTTATGTCGGCTGTGTCGCGAGAGCGTGCTTTTTCACGCG
ATGGTTCCTTGATGCACTCGAGCGCTTGATCGTTCCATGTCCGGAGCTTT
ACGTATTGAGCGCCGTACGTACAGTACGTCCCGGTTGCACCACTAGCACG
GGAAGAACTAGCAGCAGCAAGGACGTATTCGTATTCAGCGTTTAGGCCCT
GTTAAGTGTTGTCGGTGCTGTAGCGCTGCTCGATCCTGCGCCGAGCCACT
GAGAAAGTGTCCTGGCCCCTGTCAGCGTCGTTGGCCCAGTTGCCACATAT
GTACTATTTACGACAGGACAGAACAATCAGGCAGCACGTTGCAACTGGGC
CGACGAGACTGACACCAACCAGGATACTTTCTTGAGTGGCTCAGCGCAGG
ACCGAGCAGCGCTACAGTACCGACAACACGTGACAGGGCCTAAATGCTGA
ACACGCCCATGCTCCTGATGTTTGTTTATAGGTAGTTCCCCCGTGCTAGC
TTGCAGCGGATCGATCTGCCGCGCCCTTTTTAGGATCATGAAGACCGAGA
AATAGACACGAGGATTAACCCAAGCCGTGGTATCCAAACATATGTTCTGA
TGTGTGCGTTAGCTTCAACCAGAGGGTTACTGTAGATTGTACGTAAGCCC
CCGGAAACGAGTGCTGCTAACAGTGCGCAGAAGTTGCCGGGCCCGAAACC
TATCGAGAAGTGGCGAGGCCTACACAGGGGAGGATGAATCTCAGAAGCAC
GGTCTCTGCGCTTGAGTCGCATTCTCCAGTTGTCCAATACCCCGCATACC
ACCCTTCCATCGGGTTCCTTTGTCATTTTCAACAGTCTCAGCCGTGAGCT
GCCGTCGATGTCCTTGCTGTAGTTTGTATCTGCGTTGGGCTCTTTGAGTA
GGTCCGCTTTTGTCAACTAAGCGGCGTGCCCACCTGTACACATGCACACC
CGGTGCTCCTTCCCGTTCCCCGACGAACGAAATGAACCGGATCAGGTCCG
GGTCGTGGGACGGAACCCTGCGGTTGTGGGAGATCCAGTCCGGCCGCACC
ACCCGCCGGTTCGTCGGCCACGCGAAAGACGTTCTTTCGGTGGCCTTCTC
GGCTGACAACAGGCAGATCGTGTCCGGGTCCCGCGACAAGACCATCAAGT
TGTGGAACACCCTCGGGGAGTGCAAGTACACCATCCAAGAGGACGTGAGT
ACTGCTGCTGGTGCTGCTACTGTTGGTTGTGGTTGTGGTTGGCAGTCTTG
TTGGGGCGCGGTCCCTCAGAGTTTGCGCGTACACCTTTCGTCGGAACGTT
CCGAGGTGTGATTGCTGCAAGTCATGGGGCATTTCTTCCAACATGTCTTG
AGGCCGTATTGTAGGATATTTGCTGTTTTTATGATACCTTGTGCTGCGTC
GTATTCGGCAGCGATCATCACGTGATACTTCCCTTTCAATTACAAGGGAG
TCCATTCGACTCCGCCGTGTTGAGGTGCTTGACATGCAAGGGAAGCGTGA
ACAAGGAATTTTTAGAGTAAGATGTTACGTAACAAACGTTTGTTAGATTC
CGGGTCTCAGCAGGCGTTGCCCCTCGAGCGTTTACGCGCACTGCCCAAAA
TGGGCGGAGCGCGCGGTTGGCGAGGGGTGTCATGAACCCGAAGAAAGATT
GCCCATGAGGCAACCAGTTTTAAAAGCCTGCCCCGCCTCCTTCGTGCCCG
TGCCCAAAAAATTGTGGGTGGGCATGAAGTTGTTCTGTGCGTGGTAAGAC
CTGTCGACTGGTACATGTTTTCCTTGATTTTGTTAATTGATACGACAGCG
GCGTTGCTTCGGTGATTTCATCGATTGTCTACCAGGCGTCTTCTAACCGC
TGATAAGGTCCACCAGAGTGTAATTTGTTGTGTCAGAGTATCAATTCCGT
CACTTTACTCACACACCAAGACGTCTTTTCTAATGCTTTCTGCTTGTTGT
GGTATCCACACGAGGTATCCGAATTTGTGGTGATAGCTTGTGGCCTTCGT
GAGCGATGTCAGGTATTTATTCGCAGTGGGAAGATTGACATGTTTGCCCT
CTTTATCCTCCGAAACCAGGAACAGCCTAGCAGGCCATATGCGCTGGCAC
GGGTATAGTGTGTAAGCTGCAACCCCCAAATCAACAAACAGGTTTCGGAT
GGAGATGCTTTCCAAGTGTCGATGCACCAACCCAAATCAGCTATTGGACC
AACTACTTCCCACGTCGCACACAACCGCTACTTGTGCCTGAAAGAAAGGG
CGAGGCTCAGCCTGTTCCATGTGATCGACCATAGCATTGAACGAAACGAT
TCTTGAATTTCCCTCCGGCTTTGGTTGCCCCTTGCGCGGCGTTTTTTCCT
GGTTGTTTCGGCCTTGACGATGAACAGGGTCACACGGAGTGGGTGTCGTG
TGTGCGGTTTTCCCCGTCGCCGTCCGCCCCCGTGATCGTGTCGGCGGGAT
GGGACAAGCTCGTCAAGGTCTGGGCCCTGTCGAACTGCAAGCTGCACACC
AACCTCATCGGCCACACCGGGTGAGACCAAAATCGTAGCCTTGACCTTGC
TCCCCCTTCACGGCTTGGCCTCCGTGTCGAGTGATTGTGTTGCTTCTGTT
GTGTTTTAACTTTTTTTCCGCTGTCTTTTCCGTTGTGCTAGTGGTGTTCA
AGATGTTGGCTCCCCTTGGTGTATCGGGTGCGTGACCACAGTGAATGTCT
CTCCCCTCTTGTCTTTGCGTTCTATCTGCCACAATTGTATCGCAATGCAT
ACTTGAACACGGTGGCAAGCAGTCTCTGCTCGCTATTGTGAGCTCCCGGT
GTCCTGAGAAGCACACCTCTACTTGTTCCTCCGCACTGTTGCGCGGATGA
TCACGCGCACGCGTCATGCGGATTTAACGAAGAACTTTTTGCCACATGAA
TGTCGTGATGTACCAGGTACTTGAACACGGTGACGGTGTCGCCGGACGGG
TCCCTGTGCGCCTCCGGAGGCAAGGACGGTACCGCCATGCTGTGGGACCT
CAAGGAGGGCAAGCGCCTCTACTCCCTCGACGCGGGGGACATCATCCACT
CCCTCGTGTTCTCGCCCAACCGCTACTGGCTGTGCGCAGCCACCACCGCG
GGCATCAAGGTACGCACTAGGCAGGATTACTCTTGATTTTGATCCCGACG
CACAGGGTGAACACTTCTTGGAATGAGCATTTTTCGTGCGCTGGATGAGC
GTAGAATCTTACTCCATTGTGAAGGAGGCACACCGTGACTTGAACTCTTG
TGCATGCCACGTTGGTGGACTCGTCCCGACAATTTCGAACGGGGTATGCG
AAATGGCCGGGCAACTTGAGTCGTTACCTGTGGCGGGCAGATATCCACGG
ATGCAGCATCGAGGGTGTTGCTGTAGCAGCGAACAAACACCCGCGGCGGG
GACGGGGGTTTAAGGATTTTATACCTAAGGATCGAGCACGATAATGCCTT
GCGTGTGGTTCCACTGCTGCGGTGGGTTCCTTATTTTCCTCGAACTTGGT
GTGAAACCTTCCCATCCTAAACGTAACAGACGTGAAGCCATTGGTTTGTA
GTGCATTATCAGGGCTTTGTTTTTCAATGTCTAACATATTTTTCATGTTG
AATTCGTCAGATCTGGGACCTGGAGTCGAAGGTGGTGGTGGACGAGCTCC
GACCGGAGTTCCCCGAGGTGTCGATGAAGGCCATTGTGCCGTACTGCACC
TGCCTCTGCTGGTCCAACAACGGGAGCATCCTCTACTCCGGGTAA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7151:2098..6692-

>mRNA_Ecto-sp13_S_contig7151.18258.1 ID=mRNA_Ecto-sp13_S_contig7151.18258.1|Name=mRNA_Ecto-sp13_S_contig7151.18258.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=906bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7151:2098..6692- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGAGAGCAACTCAAGTTTCGCGGCCAGCTGGTGGCACACGAGGACTG
GGTCACGTCCATCGCGGCCACCTCGGAGAACCCGGACATGATCGTGTCCT
CGTCCCGCGACAAGAGCATCATCGTCTGGAAGCTCCAGCGCGGGGAGGAC
CAGTACGGCTACCCCCACCGCTCGCTCACCGGCCACTCCCACTTCGTGTC
TGAGGTCGTTATCTCCTCCGATGGACAGTTCGCGCTGTCCGGGTCGTGGG
ACGGAACCCTGCGGTTGTGGGAGATCCAGTCCGGCCGCACCACCCGCCGG
TTCGTCGGCCACGCGAAAGACGTTCTTTCGGTGGCCTTCTCGGCTGACAA
CAGGCAGATCGTGTCCGGGTCCCGCGACAAGACCATCAAGTTGTGGAACA
CCCTCGGGGAGTGCAAGTACACCATCCAAGAGGACGGTCACACGGAGTGG
GTGTCGTGTGTGCGGTTTTCCCCGTCGCCGTCCGCCCCCGTGATCGTGTC
GGCGGGATGGGACAAGCTCGTCAAGGTCTGGGCCCTGTCGAACTGCAAGC
TGCACACCAACCTCATCGGCCACACCGGGTACTTGAACACGGTGACGGTG
TCGCCGGACGGGTCCCTGTGCGCCTCCGGAGGCAAGGACGGTACCGCCAT
GCTGTGGGACCTCAAGGAGGGCAAGCGCCTCTACTCCCTCGACGCGGGGG
ACATCATCCACTCCCTCGTGTTCTCGCCCAACCGCTACTGGCTGTGCGCA
GCCACCACCGCGGGCATCAAGATCTGGGACCTGGAGTCGAAGGTGGTGGT
GGACGAGCTCCGACCGGAGTTCCCCGAGGTGTCGATGAAGGCCATTGTGC
CGTACTGCACCTGCCTCTGCTGGTCCAACAACGGGAGCATCCTCTACTCC
GGGTAA
back to top