mRNA_Ecto-sp13_S_contig7132.18235.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7132.18235.1
Unique NamemRNA_Ecto-sp13_S_contig7132.18235.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7132.18235.1 vs. uniprot
Match: D8LLL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLL5_ECTSI)

HSP 1 Score: 426 bits (1095), Expect = 6.490e-146
Identity = 217/229 (94.76%), Postives = 223/229 (97.38%), Query Frame = 1 
Query:  121 MDKTPTTDPLGGVGSSPSSQVDVELRVQPRPQPCSLPIVLGSSSGYRRRIMDSLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLDKPAVLITADQVCLFDEGHGRGEEVREKPESLEEAKAFLRSYSCRSVKTLSALCVTNLDTGRAAEGVHESTVSWREISPAVVDDVIAGGNVMGSAGGFALEEPGLRSLVDKIEGSVDSVLGLPVDLLCTLVERAT 807
            MD+TP TDPLGG GSS SSQ DVEL+VQPRP+PCSLPIVLGSSSGYRRRIMDSLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLDKPAVLITADQVCLFDEGHGRGEEVREKPES+EEAKAFLRSYSCRSVKTLSALCVTNLD GRAAEGVHESTV+WREISPAVVDDVIA GNVMGSAGGFALEEPGLRSLVDKIEGSVDSVLGLPV+LLCTLVERAT
Sbjct:    1 MDETPKTDPLGGGGSSLSSQPDVELQVQPRPKPCSLPIVLGSSSGYRRRIMDSLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLDKPAVLITADQVCLFDEGHGRGEEVREKPESVEEAKAFLRSYSCRSVKTLSALCVTNLDNGRAAEGVHESTVAWREISPAVVDDVIARGNVMGSAGGFALEEPGLRSLVDKIEGSVDSVLGLPVELLCTLVERAT 229
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BLAST of mRNA_Ecto-sp13_S_contig7132.18235.1 vs. uniprot
Match: A0A7S2XZD4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZD4_9STRA)

HSP 1 Score: 178 bits (452), Expect = 1.000e-49
Identity = 95/205 (46.34%), Postives = 139/205 (67.80%), Query Frame = 1 
Query:  193 LRVQPRPQP-CSLPIVLGSSSGYRRRIMDSLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLD-KPAVLITADQVCLFDEGHGRGEEVREKPESLEEAKAFLRSYSCRSVKTLSALCVTNLDTGRAAEGVHESTVSWREISPAVVDDVIAGGNVMGSAGGFALEEPGLRSLVDKIEGSVDSVLGLPVDLLCTLVER 801
            +R + RPQP   +PI+LGSSS  R++++ + GW+FS  SPD+DEKAIR  +P ++   I+R K  AL  R+   P++LI +DQV  F         +REKPE+ ++A+A+L SYS  SV T+S + VTN  +G++AEGV  +TV W  ISP V++ V+A G +M SAGGF +E+  L  LV  I+G+ DSVLGLP+ L+C L+++
Sbjct:    6 VRFETRPQPQTEIPIILGSSSTNRKQVLQTAGWDFSCMSPDIDEKAIRCENPEELVILISRGKTEALLPRVTGSPSILICSDQVVSFQGT------IREKPENEDQARAYLSSYSGNSVSTVSGVMVTNTGSGKSAEGVDVATVHWDTISPEVIERVVARGEIMTSAGGFRIEDVDLSPLVKNIQGTKDSVLGLPLALVCDLIDQ 204
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BLAST of mRNA_Ecto-sp13_S_contig7132.18235.1 vs. uniprot
Match: A0A0G1WSY9_9BACT (Nucleoside triphosphate pyrophosphatase n=1 Tax=Parcubacteria group bacterium GW2011_GWA2_51_12 TaxID=1618856 RepID=A0A0G1WSY9_9BACT)

HSP 1 Score: 147 bits (370), Expect = 5.220e-38
Identity = 84/193 (43.52%), Postives = 121/193 (62.69%), Query Frame = 1 
Query:  232 IVLGSSSGYRRRIMDSLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLDKPAVLITADQVCLFDEGHGRGEEVREKPESLEEAKAFLRSYSCRSVKTLSALCVTNLDTGRAAEGVHESTVSWREISPAVVDDVIAGGNVMGSAGGFALEEPGLRSLVDKIEGSVDSVLGLPVDLLCTLVERATA 810
            I+LGS S  R  I+   G+EF    P++DEKAIR  DP+K+ A +ARAK  AL  ++   A+LIT+DQV  F EG     ++REKPE+  EA+ FL +    + +T +A+ VTN  TG+ A G+  + V +++I PAV++D I+ G     AGGFA E P L   +  +EG +DS+LGLP++L   L+E  TA
Sbjct:    3 IILGSQSKNRADILQEAGFEFDVLPPNIDEKAIRSSDPKKLPALLARAKTDALLPKISGEALLITSDQVVSF-EG-----QIREKPETEAEARKFLETGHESANETYTAVEVTNTSTGKRASGLDIARVFFKKIPPAVINDFISSGEPFSHAGGFAAESPLLAPYIVGVEGEMDSILGLPMNLTRALIEEVTA 189
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BLAST of mRNA_Ecto-sp13_S_contig7132.18235.1 vs. uniprot
Match: A0A2M7XEA1_9BACT (7-methyl-GTP pyrophosphatase n=1 Tax=Candidatus Uhrbacteria bacterium CG_4_9_14_3_um_filter_50_9 TaxID=1975035 RepID=A0A2M7XEA1_9BACT)

HSP 1 Score: 145 bits (365), Expect = 4.010e-37
Identity = 77/193 (39.90%), Postives = 123/193 (63.73%), Query Frame = 1 
Query:  223 SLPIVLGSSSGYRRRIMDSLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLDKPAVLITADQVCLFDEGHGRGEEVREKPESLEEAKAFLRSYSCRSVKTLSALCVTNLDTGRAAEGVHESTVSWREISPAVVDDVIAGGNVMGSAGGFALEEPGLRSLVDKIEGSVDSVLGLPVDLLCTLVER 801
            +L I+LGSSS +R+R+   +   F + SPD+DEK IRD DP+ +   IA AKA AL  ++ +PAVL+TADQ+ + + GH     VREKP   EE +AFL SY+ + V+ ++ +  T+  TG  AEG     + ++ I  AV++ +I  G+VM  AGG   E P L++ +  ++G+V+S+ G+P++L   L+++
Sbjct:   13 TLKIILGSSSKFRQRVFAKITPTFESLSPDIDEKTIRDEDPKTLTRMIAHAKADALLPKIHEPAVLVTADQIVVVN-GH-----VREKPRDEEECRAFLHSYNDQPVEVVNGIVATHTQTGMRAEGNDVVRIQFKHIPEAVIEQLILEGDVMHCAGGLRAEHPALQNSIASMDGTVESLRGVPLELTKRLIKQ 199
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BLAST of mRNA_Ecto-sp13_S_contig7132.18235.1 vs. uniprot
Match: A0A1G2R879_9BACT (Nucleoside triphosphate pyrophosphatase n=1 Tax=Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_02_FULL_48_16 TaxID=1802453 RepID=A0A1G2R879_9BACT)

HSP 1 Score: 144 bits (363), Expect = 5.650e-37
Identity = 75/191 (39.27%), Postives = 122/191 (63.87%), Query Frame = 1 
Query:  232 IVLGSSSGYRRRIMDSLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLDKPAVLITADQVCLFDEGHGRGEEVREKPESLEEAKAFLRSYSCRSVKTLSALCVTNLDTGRAAEGVHESTVSWREISPAVVDDVIAGGNVMGSAGGFALEEPGLRSLVDKIEGSVDSVLGLPVDLLCTLVERA 804
            I+LGS+S  R+ +++ +G+ F   +  +DEKAIR+ DP+K+   +A+AKA AL  R+ +PA+LITADQV + +       ++ EKPE+LE+A++FLR Y+    K  +++ VTN +TG    G  E+T+  R +   V++ +I  GN+   AG +AL +P +   +D++EGS+DS  GLP +L   L+  A
Sbjct:    3 IILGSASKQRKGVLEKMGYVFEVMTAGIDEKAIREVDPKKLTMALAKAKAEALRSRIKEPALLITADQVVVCNG------QILEKPENLEQARSFLRGYADYPAKPTNSILVTNTETGVQVGGSDENTIYLRPLPEDVIEQLIKEGNIFSWAGAYALIDPLIVPYIDRVEGSIDSAEGLPRELTERLLREA 187
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BLAST of mRNA_Ecto-sp13_S_contig7132.18235.1 vs. uniprot
Match: A0A1G2MS12_9BACT (7-methyl-GTP pyrophosphatase n=1 Tax=Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_46_13 TaxID=1802312 RepID=A0A1G2MS12_9BACT)

HSP 1 Score: 144 bits (362), Expect = 7.200e-37
Identity = 76/190 (40.00%), Postives = 124/190 (65.26%), Query Frame = 1 
Query:  232 IVLGSSSGYRRRIMDSLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLDKPAVLITADQVCLFDEGHGRGEEVREKPESLEEAKAFLRSYSCRSVKTLSALCVTNLDTGRAAEGVHESTVSWREISPAVVDDVIAGGNVMGSAGGFALEEPGLRSLVDKIEGSVDSVLGLPVDLLCTLVER 801
            I+LGS+S +R+ ++D++G+E+   SPD+DEKAIR  DP K+   +A AKA+AL  ++ +PA++IT DQV +++       ++REKP++ +EA  FL SY     +T SA+ VTN   G+ A GV  + V ++ I   ++D+V+  G +  +AGG  +E+  L   +++I+G+VDS+ GLP  LL  L+E 
Sbjct:    3 IILGSASKWRKGVIDTMGFEYEVMSPDIDEKAIRLRDPDKLVLALAEAKAKALLTKVKEPALIITGDQVVVWNG------QIREKPQNEKEAGYFLESYCEHPAETHSAVMVTNTANGKHAMGVDVARVYFKNIPKEIIDEVVKKGAIYTTAGGIQMEDALLAPYIERIDGTVDSLKGLPKALLTKLMEE 186
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BLAST of mRNA_Ecto-sp13_S_contig7132.18235.1 vs. uniprot
Match: A0A1G2R322_9BACT (Nucleoside triphosphate pyrophosphatase n=1 Tax=Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_02_FULL_47_12 TaxID=1802451 RepID=A0A1G2R322_9BACT)

HSP 1 Score: 143 bits (361), Expect = 1.030e-36
Identity = 75/190 (39.47%), Postives = 121/190 (63.68%), Query Frame = 1 
Query:  232 IVLGSSSGYRRRIMDSLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLDKPAVLITADQVCLFDEGHGRGEEVREKPESLEEAKAFLRSYSCRSVKTLSALCVTNLDTGRAAEGVHESTVSWREISPAVVDDVIAGGNVMGSAGGFALEEPGLRSLVDKIEGSVDSVLGLPVDLLCTLVER 801
            I+LGS+S  R+R+++  G+ F   + D+DEKAIRD DP+K+   +ARAKA AL  ++ +P +LITADQV L++       ++ EKPES E+A+ FL+ Y+    + ++A+ VTN  TG       E+TV + +    V++ +I  GN+   AG F+LE+P +   ++ IEG++DS+ GLP +L   L++ 
Sbjct:    3 IILGSASKQRKRVLERWGYSFEVMTADIDEKAIRDDDPKKLTMALARAKAEALRPKIKEPVLLITADQVVLWNG------QILEKPESPEQARRFLKGYAQYPAQPVNAVVVTNTQTGVQLGENDENTVYFHKFPDDVIEQLILEGNIFSQAGAFSLEDPLITPYIEHIEGTLDSIEGLPKELTERLMKE 186
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BLAST of mRNA_Ecto-sp13_S_contig7132.18235.1 vs. uniprot
Match: A0A1F6X051_9BACT (Nucleoside triphosphate pyrophosphatase n=1 Tax=Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_36_16 TaxID=1801767 RepID=A0A1F6X051_9BACT)

HSP 1 Score: 140 bits (353), Expect = 2.120e-35
Identity = 79/192 (41.15%), Postives = 124/192 (64.58%), Query Frame = 1 
Query:  232 IVLGSSSGYRRRIMDSLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLDKPAVLITADQVCLFDEGHGRGEEVREKPESLEEAKAFLRSYSCR-SVKTLSALCVTNLDTGRAAEGVHESTVSWREISPAVVDDVIAGGNVMGSAGGFALEEPGLRSLVDKIEGSVDSVLGLPVDLLCTLVERA 804
            ++LGSSS YR+ +M+  G+ F    P++DEK I + DP K    +ARAKA  L  ++++PA+LIT+D V + +   G+   +REKPES EEA+ FLR YS   + + ++A+ + N  TG   EGV ++ V W   S +V+++ I  G+ +G AGGF ++ P LR  V KIEG+ +S++G+P+ LL  L+ +A
Sbjct:   13 LILGSSSKYRKDLMEKAGYVFEVLIPELDEKEIIENDPYKRPLLLARAKANVLISKINEPALLITSDAVAVCN---GK---LREKPESEEEARKFLREYSAGVAPEGVTAIVIFNTATGVYYEGVAKAQVFWNPFSESVIENFIKIGDPLGRAGGFGVQHPILRPYVKKIEGNEESIVGMPIHLLKELLTKA 198
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BLAST of mRNA_Ecto-sp13_S_contig7132.18235.1 vs. uniprot
Match: A0A554MGT6_9BACT (Nucleoside triphosphate pyrophosphatase n=1 Tax=Parcubacteria group bacterium Greene0714_21 TaxID=2017158 RepID=A0A554MGT6_9BACT)

HSP 1 Score: 139 bits (349), Expect = 5.620e-35
Identity = 73/190 (38.42%), Postives = 120/190 (63.16%), Query Frame = 1 
Query:  232 IVLGSSSGYRRRIMDSLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLDKPAVLITADQVCLFDEGHGRGEEVREKPESLEEAKAFLRSYSCRSVKTLSALCVTNLDTGRAAEGVHESTVSWREISPAVVDDVIAGGNVMGSAGGFALEEPGLRSLVDKIEGSVDSVLGLPVDLLCTLVER 801
            I+LGS+S  R+R+++  G+ F   + D+DEKAIR  DP+++   +A+AKA  L  ++ +PA+LITADQV +++       ++ EKPE+ EEA+ FLR Y+    + ++A  VTN +TG+       +TV ++     V++ +I  GN+   AG F+LE+P +   VD IEG++DS+ GLP +L   L++ 
Sbjct:    3 IILGSASKQRKRVLERAGYRFEVMAADIDEKAIRLDDPKELTMALAKAKAEVLLPQIKEPALLITADQVVVWNG------QILEKPENAEEARQFLRGYAQYPAQPVNATVVTNTETGKQIGENDINTVYFKPFPDEVIEQLIHEGNIFSQAGAFSLEDPLVAPYVDHIEGTLDSIEGLPFELTQRLLKE 186
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BLAST of mRNA_Ecto-sp13_S_contig7132.18235.1 vs. uniprot
Match: A0A1F6Y7F0_9BACT (Nucleoside triphosphate pyrophosphatase n=2 Tax=Candidatus Nomurabacteria TaxID=1752729 RepID=A0A1F6Y7F0_9BACT)

HSP 1 Score: 135 bits (340), Expect = 1.090e-33
Identity = 75/192 (39.06%), Postives = 121/192 (63.02%), Query Frame = 1 
Query:  232 IVLGSSSGYRRRIMDSLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLDKPAVLITADQVCLFDEGHGRGEEVREKPESLEEAKAFLRSYSCR-SVKTLSALCVTNLDTGRAAEGVHESTVSWREISPAVVDDVIAGGNVMGSAGGFALEEPGLRSLVDKIEGSVDSVLGLPVDLLCTLVERA 804
            ++LGSSS YR+ I++  G+ F   SPDV+EK I+  DP +    +ARAK  AL  ++++PA+LIT+D + + +       E+REKPES++EA+ FLR YS   + + ++A+ + N  TG   EGV  + V +     +V++D I  G+ +  AGGF ++ P LR  V KI+G  +S++G+P+ LL  L+ +A
Sbjct:    3 LILGSSSKYRKEILEKAGYVFDVLSPDVNEKLIQINDPYERPLIVARAKTDALISKVNEPALLITSDVIAVCNG------ELREKPESIDEAREFLREYSQGVAPEGVTAIVIFNTVTGEYYEGVDRAQVFYNPFPESVIEDFIKNGDPLSRAGGFGVQHPVLRPYVKKIKGDEESIVGMPLHLLKRLLTQA 188
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7132.18235.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLL5_ECTSI6.490e-14694.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2XZD4_9STRA1.000e-4946.34Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A0G1WSY9_9BACT5.220e-3843.52Nucleoside triphosphate pyrophosphatase n=1 Tax=Pa... [more]
A0A2M7XEA1_9BACT4.010e-3739.907-methyl-GTP pyrophosphatase n=1 Tax=Candidatus Uh... [more]
A0A1G2R879_9BACT5.650e-3739.27Nucleoside triphosphate pyrophosphatase n=1 Tax=Ca... [more]
A0A1G2MS12_9BACT7.200e-3740.007-methyl-GTP pyrophosphatase n=1 Tax=Candidatus Ta... [more]
A0A1G2R322_9BACT1.030e-3639.47Nucleoside triphosphate pyrophosphatase n=1 Tax=Ca... [more]
A0A1F6X051_9BACT2.120e-3541.15Nucleoside triphosphate pyrophosphatase n=1 Tax=Ca... [more]
A0A554MGT6_9BACT5.620e-3538.42Nucleoside triphosphate pyrophosphatase n=1 Tax=Pa... [more]
A0A1F6Y7F0_9BACT1.090e-3339.06Nucleoside triphosphate pyrophosphatase n=2 Tax=Ca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7132contigEcto-sp13_S_contig7132:470..5388 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score428.3
Seed ortholog evalue2.2e-117
Seed eggNOG ortholog2880.D8LLL5
Model size1491
KEGG koko:K06287
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.nucleoside-triphosphate diphosphatase activity
EggNOG OGsCOG0424@1,KOG1509@2759
Ec32 ortholog descriptionMaf-like protein
Ec32 orthologEc-04_005320.1
Cds size693
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7132.18235.1prot_Ecto-sp13_S_contig7132.18235.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7132 590..4710 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463978.7174428-UTR-Ecto-sp13_S_contig7132:469..5891681463978.7174428-UTR-Ecto-sp13_S_contig7132:469..589Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7132 470..589 +
1681463978.8091526-UTR-Ecto-sp13_S_contig7132:4710..53881681463978.8091526-UTR-Ecto-sp13_S_contig7132:4710..5388Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7132 4711..5388 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463978.7304683-CDS-Ecto-sp13_S_contig7132:589..6191681463978.7304683-CDS-Ecto-sp13_S_contig7132:589..619Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7132 590..619 +
1681463978.7413466-CDS-Ecto-sp13_S_contig7132:1811..19521681463978.7413466-CDS-Ecto-sp13_S_contig7132:1811..1952Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7132 1812..1952 +
1681463978.7515123-CDS-Ecto-sp13_S_contig7132:2551..26951681463978.7515123-CDS-Ecto-sp13_S_contig7132:2551..2695Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7132 2552..2695 +
1681463978.77829-CDS-Ecto-sp13_S_contig7132:3351..34201681463978.77829-CDS-Ecto-sp13_S_contig7132:3351..3420Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7132 3352..3420 +
1681463978.7907693-CDS-Ecto-sp13_S_contig7132:3804..39841681463978.7907693-CDS-Ecto-sp13_S_contig7132:3804..3984Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7132 3805..3984 +
1681463978.8002965-CDS-Ecto-sp13_S_contig7132:4581..47101681463978.8002965-CDS-Ecto-sp13_S_contig7132:4581..4710Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7132 4582..4710 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7132.18235.1

>prot_Ecto-sp13_S_contig7132.18235.1 ID=prot_Ecto-sp13_S_contig7132.18235.1|Name=mRNA_Ecto-sp13_S_contig7132.18235.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=231bp
MDKTPTTDPLGGVGSSPSSQVDVELRVQPRPQPCSLPIVLGSSSGYRRRI
MDSLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLDKPAVL
ITADQVCLFDEGHGRGEEVREKPESLEEAKAFLRSYSCRSVKTLSALCVT
NLDTGRAAEGVHESTVSWREISPAVVDDVIAGGNVMGSAGGFALEEPGLR
SLVDKIEGSVDSVLGLPVDLLCTLVERATA*
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mRNA from alignment at Ecto-sp13_S_contig7132:470..5388+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7132.18235.1 ID=mRNA_Ecto-sp13_S_contig7132.18235.1|Name=mRNA_Ecto-sp13_S_contig7132.18235.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4919bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7132:470..5388+ (Ectocarpus species13 EcNAP12_S_4_19m)
AAAAAAGAAGAGAACAACTCAGGCAACATCATCAGCAGCAGCACAGCGGT
GGGGAACAACTCTGTCCTCTACCCCTGACGCCTGGTTGTACCCGTTGTTG
TTGTTGGGCAGGAGCAGGTCATGGACAAGACCCCCACGACAGACCCTCTG
GTGAGTATGTATGTACTTCACTCGCCAGGCGCATCTACCCTAATACCCAC
GTGTCCGCGCCATTGGCTCGACTCGCGTGCATATGTTTATGCTGTGTAAG
CACCAGTCCGTGTGGAGGATGGTTTAACTTGCAAGGCAGTTGTTACCGAC
GCCCAGCAAGTTGTAAGATAGTGCCGCGTCCGGGCCGACATAATAGTGCG
TCCTGATGCCCGATTTGCTTGCGTCTTTAACGTTCTATTGGTCTGCAGCA
AAGCTCTACAGCTTTCAGGTGTAGTTTATGTAGACGAGGACACAGGCTTG
TTCAACCCCGTCCGTATTCAAAGATGGTTGTACGCGGGATCATCGATTCC
ATTCCAAAGGAGATGAAGGTCCCGAGCCAAATCATGTGTATTTCGGAGAG
ATTGTTTGACAACATGCCCTTAGCAGCGCCATCAACAAACCGTCCAGCTT
GCGACAGAATCGGGTCATGCTCGCCCTCCGAGAAGGGGGGGTGGTAAACA
ACGTCTCATACGAAGAACCATCCCTTCCAACTCAATTTCTTGCTTAATCC
TTCATAATTTGCATGTGTTTAGCCATGCCCGTGCGCGTTGCACGCTTCCA
AGGGTATCTTCAGCCGAAAGCCTCAGTAGACCCCGTGAAGCATGTACTGC
GGTATGTGTGGTGGTTTCGTCGGGCCTCCCCGTGCCGGCGATACTCTTTT
CGATACTCCTGTAATACAAATGCATCCCGCTCTGTGGACGGGAACCTGCA
GGAAGGTATCTAGGTTCTTTTGTCCCGAAAGGTATTGGCATACTTCCGGC
ACACAACTGGTGTGAACCCAGCAACAACAAAGATTAGTTGTTGCCGCGAA
AAAGGTAGGGCCGTAACCAGTACATGTAACCACGTGTTCGCAAGAAATAA
CGCGATGAATTTTCGCCAAGAAAAGCTTGCACTACGCCATCCATCTGTGC
CTGAAACTCGATTTTTAGGCTAACTTGGTCCTGCGTTATTGCTGACACCA
AGCCACTTCCGAAACCTCACACTCCGTGCAACGGCTACTTCATTGCCCCT
TTCGCCATATTTTTTCAACGCCGTTCCTCACCCACCACCACCACCACCAC
CACCACCACCACCACTACCACCACTACCACGGCCGACGACGACGACGACG
ACGGCGACGATTACAACACCGACGGTCGTGCACGACGAGCAGGGGGGGGT
TGGCAGTAGCCCCTCGAGCCAGGTGGACGTGGAGCTACGAGTGCAGCCTC
GGCCACAGCCGTGCTCGTTGCCCATCGTGTTAGGTTCGTCGTCGGGGTAC
CGCCGGAGAATCATGGATTCCCTGGGCTGGGAGGTAGGTGCGGTGAAAAA
GCGTGCGAGTCTGTCTGCCTACTACAACACATGCCCGCGGGAGCGGCGAA
GGGGGCCCGGCACTCAGTACTGGCCGTAGTGACACGCGTTGCCGTGTATG
GACCCACTGGCTCTGCCGTTCCCGTAACGCCGGGGCGGGGCACGTTAGGC
TTTCACATGGTAAGCGTTTCTTCCTCACGCCGAGGAAGAGGGGGGAAGGA
GAGTTATATCGCCTAGGGTGGGTCCTAGTCTCGCCCGGCAATTGAATCTG
ATTAGCGCGGAGGGAGAGTGAGTGTGCTCATAACCCTTTCTTGCTTCGCA
CTCTTGGCGAATCTTTTCGTGGCAAACTTGTCTTCTTTTTCTGCTGGAAA
GCCTGCCTGTTTACTTCGCATAGCGAAGGTGCCTCGTGAAGGCGTCTCAA
CGTTTGTGTCCCTGGTCGCGAGATCTCATCATATTGTAGCGCCACGGCTG
CAGGGCTCTTGACATACTCCCTCACCGTATTGCACCCTGATTCCCCGCAT
CCTCACGACAACAGAAGCAATGATTGGGTGACCCCCCCGCCCCCCGGCCC
GTCCCGTCCCTTCCACGAAACCCCTCCACTAGTTTTCCACGGCCTCTCCC
GACGTCGACGAGAAGGCCATCCGCGATCCTGACCCGAGAAAGATGTGTGC
CGAAATCGCGCGGGCCAAGGCGAGAGCGCTGGCGGAGCGCCTGGACAAAC
CCGCGGTCCTCATCACAGCAGACCAGGTTGATGACTCTTGTTCTGTGGTT
CGTGAGTTTGCGCGATATTTTTTTGCAGGCGGGCATTTCCATCGGGCATA
TTCTCCTCGGGCAAAGGACGGAGGGATGCCGGCCTGAGCGGGACAAACGC
GACGCGCGCGCGCTGTAACGTTGTAGCATGTATGTATATTGTTGTTGCTC
ATTTGAAGTCGGTATCGATCTCGCCAATGTGACTGATAGCCGAGGAGGAA
GAGTCACCTCGGCAAGTCACACGCGAGAAAGCTTTGCCTTTTGGCTTCGT
ACGTTCGTGAAGCACGATTGTTGGTGCCTGTTAGCCATCTACTGGTCGGG
GGGTCCCGCTGCGCTTAGTTCGTGTGTATCATACGTACACCCGAATATTG
ACGATACAACGAGCGCCCAAGGGTATCTATGCATATCGAGATGTGCTTTT
GCTTCGTTTCTTGTACAGTCGCACCTCGGTTTAGGACACACAACACATAG
TTTCTTCTAAAAAACAGTGTCCTTATGCTGGGGAAGTGTCCCTCAGGTTG
ATACCCCTCCTTTTTTTTCCATTCTGCGAGCCACCCATGTCTGTGAACAA
AAGCTGTCCTCAACCGAGGGAGTTTCCTTAATTTTGGTGTCCTTACGCTA
GGCATGACTGTACCGCCGTTTGGGTCAACCAGGTGTGCCTTTTCGACGAA
GGTCACGGCCGCGGGGAAGAGGTTAGGGAGAAGCCCGAAAGCCTCGAAGA
GGTGCGTCATGTTCTTGTTCTAGATCAAGCGCTTGCGGGACTGAATATTT
CGTGTCGGGGTTTCTACAAGCACTCGCAACCGTGCCACCACGTACCACCT
CAGAACCTGGCGTTTAAGGACTTGAGGCTACAACAAATGGTAGAAACTAC
AATGTGAAAACTCGGGAAAAACAATAACCAGGAGTGGGTAGTCTTTTGTG
TACCTTCCAATACGGGTTTGTCCCTCCGGGGCAATGGCTAGCTTTTCTAC
CGTACTGGAAGCGTCAGAGCGAAGCGTCTTGACCTCCAGGATTCGAAACC
CTACCCTCATTCAAATACCCTCCGTTTCTCAGGCTCCTTCCGTAATTCAA
TGGCGCTACTGTGCATCCGTTCCCGCCCCGCACAGGCGAAGGCGTTCCTC
CGGAGCTACTCCTGCCGGTCGGTGAAGACCCTGAGCGCCCTCTGCGTGAC
AAACCTCGACACCGGGCGGGCGGCGGAAGGCGTGCACGAGTCCACCGTGT
CCTGGCGGGAGATTTCTCCGGCCGTGGTCGACGACGTCATCGCCGGGGGG
AACGTTATGGGGTCGGTGAGGAGCGAGAAAAACGGAAATGGAATACCGTG
CGGGTGCATTGTAGTAGTGTGTGTGTGTGTTTCTTTCGCGGAATAACCAT
CATCATCGCCGTCGCGCAGGGTATGTGGGTACTAGCCACACACCGCCGTT
AGCAACGAGTGCCTTGGTACTGAGGTCGCCGTTCGTGGTTGTTGTGGTCT
TCGTACCGAAATAGCCGTTCCGAAATTTGCCAATGGCCACTTGACATCCG
CACATTCTATTTTCCAACTGACGCGTTGGTCTGGTTTGTCGGGCGCTTCT
CGTTCCGACACGATCGGCCGACTTGCAGCACCGACGGGTCGCAGTCTCTT
TCGTTTTCTTGCCCGCAAGCCAGGCTGGTGGCTTCGCCGTTGCAGTCCCA
GGTTCCGCACTGTCCGTGGAGGGCAGGGTCGTGGGACCATGGGATAGCAT
AAACCGTCGATGAGCAAACAAGAGCACTGGCTCTAGTCACTGAGCGTTAA
GAACTTTTCGATGTTTGTTTAGCCTACCTACGTACCCGCACTTGATTTTA
CTAGTGTTGCGTGTGCCCTTTGACGTTGATACTGTTGTCTACGCAACTTG
GCGGACCGCCAGGCGGGCGGCTTTGCGCTGGAAGAGCCAGGCTTGAGGTC
GCTGGTGGACAAGATCGAGGGCTCGGTCGATAGTGTCCTGGGCTTGCCCG
TTGACCTCCTGTGCACCCTCGTCGAGCGCGCCACGGCGTGAGCTAGAGAA
GGAGGCGGTCGATAGTGGTAGCCGGGGTAGTCGCATGTGCGGGATTGAGA
AATAACACCACACACAATGGCCGTTAGTGGGGACCCAGGTAGATGTGTTT
CTTGAGGAGGGAGAGGAGAGAGGAGGGAGAATGGGAGAGAGAGGAGAGGA
GAGAGACACAGAGTGAGAGAGGTAGAGAGACAGAGAGAGAGGCCTGGACC
AAGAGACTACAGTTTTTCGCTTGTTAGGTGCGTCGGTCGGGGAGAGTGTA
CTGTAACGCTTCACACACAAGGCAGGTATGTAGTTTCATGTCGTTGTCCC
AGATGGTGTTGTTGGCAGCAACGCATAGCTTCAGCACAGGTGTTCCTTGC
TTCGGTTGTACGCGCAGAGAAGTGAATGTTTCGTTGATAATGACAGCTTC
ACCGATGGCAGTCTCACAATTTTGTGGACAGAGATGGGGGAACGTTTATT
CGGACGCTTTGCAACCCATGCGGTCGTTCGTGTGTGCTGTTGCAAAAATA
TGTGTTATTCCGCACAGCGTGGTTACTGTACCCTCTAACACGAGTAAACC
CCCTCAAGTTATTTGATACTAAAGGGCGCCACCCGCCCAGCCTGAAGAGC
TCGTGCGAACAAGCTTTCGTATCAAGTCGCGCCAGAAGGGCGGCGTCATG
TTAATGTGTAAACTTTGGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7132:470..5388+

>mRNA_Ecto-sp13_S_contig7132.18235.1 ID=mRNA_Ecto-sp13_S_contig7132.18235.1|Name=mRNA_Ecto-sp13_S_contig7132.18235.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=693bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7132:470..5388+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGACAAGACCCCCACGACAGACCCTCTGGGGGGGGTTGGCAGTAGCCC
CTCGAGCCAGGTGGACGTGGAGCTACGAGTGCAGCCTCGGCCACAGCCGT
GCTCGTTGCCCATCGTGTTAGGTTCGTCGTCGGGGTACCGCCGGAGAATC
ATGGATTCCCTGGGCTGGGAGTTTTCCACGGCCTCTCCCGACGTCGACGA
GAAGGCCATCCGCGATCCTGACCCGAGAAAGATGTGTGCCGAAATCGCGC
GGGCCAAGGCGAGAGCGCTGGCGGAGCGCCTGGACAAACCCGCGGTCCTC
ATCACAGCAGACCAGGTGTGCCTTTTCGACGAAGGTCACGGCCGCGGGGA
AGAGGTTAGGGAGAAGCCCGAAAGCCTCGAAGAGGCGAAGGCGTTCCTCC
GGAGCTACTCCTGCCGGTCGGTGAAGACCCTGAGCGCCCTCTGCGTGACA
AACCTCGACACCGGGCGGGCGGCGGAAGGCGTGCACGAGTCCACCGTGTC
CTGGCGGGAGATTTCTCCGGCCGTGGTCGACGACGTCATCGCCGGGGGGA
ACGTTATGGGGTCGGCGGGCGGCTTTGCGCTGGAAGAGCCAGGCTTGAGG
TCGCTGGTGGACAAGATCGAGGGCTCGGTCGATAGTGTCCTGGGCTTGCC
CGTTGACCTCCTGTGCACCCTCGTCGAGCGCGCCACGGCGTGA
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