mRNA_Ecto-sp13_S_contig712.18220.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig712.18220.1 vs. uniprot
Match: A0A6H5JK59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK59_9PHAE) HSP 1 Score: 1313 bits (3398), Expect = 0.000e+0 Identity = 863/1000 (86.30%), Postives = 867/1000 (86.70%), Query Frame = 1
Query: 541 NEHXXXSGLGNGGAGVKGVVGLTNEGNFCYLNASLQALARCAPFRTHLVECVPGPNVAGRPCPLAFAMSKLYSEMWSDESGXXXXXXXXXXAETPAEVIRALVKGNRWFAGNGQHDAHEALRSILDLLHEELRRPVPVSFEPGHAALTAAMXXXXXXXXXXXXXXXXXXXXXXXPATASLLDDPSQNHHPSAQASXXXXDAGTDKNKRPKQGGKATPPATPADGVWSASGGDGGGNNERSTERVASGDGATAQRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGSASXXXXXXXXXXXXXXXXAPATAMRGDRHXXXXXXXXXXXXXXXG-----GAMTPTMESPRAEWEPSDVSEKRRGLGGRSATAVG---------------------GADGESEAAGGGDRSSDWGGWRRTRGGWCSATRDDXXXXXXXXXXXXXXXXXXXXXXAPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEAGEYKSTRLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFLPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRRKRPSSSWAPGTQAQSMRPGAAPAVXXXXXXXXXXSLLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPLSMTAATNGSTPGAVAAVGGTIGAEAVGEPQPRLSIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGTGGSNSWVYM-------------------------------------ATKEMVAVPRGVHRSLVNRYGPRTPAVVAGKASPLDSTIGGVKVAVAPGESADRISVGRXXXXXXXMALVGSSRPLLELTSCTACAALEEERALLKSAEQKE 3351
NEH SGLGNGGAGVKGVVGLTNEGNFCYLNASLQALARCAPFRTHLVECVPGP+VAGRPCPLAFAMSKLYSEMWSDE XXXXXXXXXXA TPAEVIRALVKGNRWFAGNGQHDAHEALRSILDLLHEELRRPVPVSFEPGHAALTAAM XXXXXXXXXXXXXXXXXXXX PATASLLD PSQNHHPSAQAS DAGTDK+KRPKQGGKATPPATPADGVWSASGGDGGGNNERSTERVASGDGA AQRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGS S XXXXXXXXXX XXXXXXXXXXXXXXX GAMTPTMESPRAEWEPSDVSEKR GLGGRS T +G GADGESEAAGGGDRSSDWGGWRRTRGGWCSATRDD XXXXXX APGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEAGEYKST LLHAPEILMLHVKRFRRGY WSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRA GTSGGDAHRKSSVRR XXXXXXXXXXXXXXXXXXSVAAAF PSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRRKRPSSSWAPGTQAQSMRPGAAPAVXXXXXXXXXXSLLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRP SMTAATNGSTPGA AAVG TIGAEAVGEPQPRLSIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGTGGSNSWVYM A KEMVAVPRGVHRSLVNRYGPRTPAVVAGK SPLD+T GGVKVAVAPGESADRISVGRXXXXXXXMALVGSSRPLLELTSCTACAALEEERALLKSAEQKE
Sbjct: 9 NEHGGSSGLGNGGAGVKGVVGLTNEGNFCYLNASLQALARCAPFRTHLVECVPGPSVAGRPCPLAFAMSKLYSEMWSDEGXXXXXXXXXXXAATPAEVIRALVKGNRWFAGNGQHDAHEALRSILDLLHEELRRPVPVSFEPGHAALTAAMAXXXXXXXXXXXXXXXXXXXXTGPATASLLDGPSQNHHPSAQASAATTDAGTDKHKRPKQGGKATPPATPADGVWSASGGDGGGNNERSTERVASGDGAAAQRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGSVSATAAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAMTPTMESPRAEWEPSDVSEKRTGLGGRSVTTLGLGGGAADEGXXXXXXXXXXXXGADGESEAAGGGDRSSDWGGWRRTRGGWCSATRDDDDGPHDRDHEGRASXXXXXX--APGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEAGEYKSTSLLHAPEILMLHVKRFRRGYFWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRAPGTSGGDAHRKSSVRRGCASPDGXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRRKRPSSSWAPGTQAQSMRPGAAPAVXXXXXXXXXXSLLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPPSMTAATNGSTPGAAAAVGATIGAEAVGEPQPRLSIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGTGGSNSWVYMSKAWALKWATSAYPGPVSNHHVVCRHGRVKPNVGVKRAAKEMVAVPRGVHRSLVNRYGPRTPAVVAGKPSPLDATTGGVKVAVAPGESADRISVGRXXXXXXXMALVGSSRPLLELTSCTACAALEEERALLKSAEQKE 1006
BLAST of mRNA_Ecto-sp13_S_contig712.18220.1 vs. uniprot
Match: D8LS72_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS72_ECTSI) HSP 1 Score: 1244 bits (3220), Expect = 0.000e+0 Identity = 850/934 (91.01%), Postives = 857/934 (91.76%), Query Frame = 1
Query: 559 SGLGNGGAGVKGVVGLTNEGNFCYLNASLQALARCAPFRTHLVECVPGPNVAGRPCPLAFAMSKLYSEMWSDESGXXXXXXXXXXAETPAEVIRALVKGNRWFAGNGQHDAHEALRSILDLLHEELRRPVPVSFEPGHAALTAAMXXXXXXXXXXXXXXXXXXXXXXXPATASLLDDPSQNHHPSAQASXXXXDAGTDKNKRPKQGGKATPPATPADGVWSASGGDGGGNNERSTERVASGDGATAQRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGSASXXXXXXXXXXXXXXXXAPATAMRGDRHXXXXXXXXXXXXXXX--GGAMTPTMESPRAEWEPSDVSEKRRGLGGRSATAVGGADGESEAAGGGDRSSDWGGWRRTRGGWCSATRDDXXXXXXXXXXXXXXXXXXXXXXAPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEAGEYKSTRLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFLPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRRKRPSSSWAPGTQAQSMRPGAAPAVXXXXXXXXXXSLLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPLSMTAATNGSTPGAVAAVGGTIGAEAVGEPQPRLSIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-GTGGSNSWVYMATKEMVAVPRGVHRSLVNRYGPRTPAVVAGKASPLDSTIGGVKVAVAPGESADRISVGRXXXXXXXMALVGSSRPLLELTSCTACAALEEERALLKSAEQKE 3351
SG GNGGAGVKGVVGLTNEGNFCYLNASLQALARCAPFR HLVECVPGP+VAGRPCPLAFAMSKLYSEMWSDE XXXXXXXXX AETPAEVIRALVKGNRWFAGNGQHDAHEALRSILDLLHEELRRPVPVSFEPGHAALTAAM XXXXXXXXXXXXXXXXXXXXXX SLLDDPSQNHHPSAQAS DAGTDKNKRPKQGGKATPPATPADGVWSASGGDGGGN ERSTERVASGDGATAQRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGSA XXXXXXXXXXXXXXXX XXXXXXXXXXXXXXX GG MTPT+ESPRAEWEPSD + A +A GGGDRSSDWGGWRRTRGGWCSATRDD XXXXXXXXXXXXXXAPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEA KST LLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAF PSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATW+HFNDTITTKVSQ+TVSSASPYILVYRRKRPSSSW PGTQAQSMRPGAAPAVXXXXXXXXXXSLLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRP SM AATNGSTPGA AAVGGTIGAEAVGEPQPRLSIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GTGGSNS ATKEMVAVPRGVHRSLVNRYGPRTPAVVAGK SPLD+T GGVKVAVAPGESADRISVGRXXXXXXXMALVGSSRPLLELTSCTACAALEEERALLKSAEQKE
Sbjct: 56 SGRGNGGAGVKGVVGLTNEGNFCYLNASLQALARCAPFRAHLVECVPGPSVAGRPCPLAFAMSKLYSEMWSDEGXXXXXXXXXXRAETPAEVIRALVKGNRWFAGNGQHDAHEALRSILDLLHEELRRPVPVSFEPGHAALTAAMAXXXXXXXXXXXXXXXXXXXXXX--XXSLLDDPSQNHHPSAQASAAATDAGTDKNKRPKQGGKATPPATPADGVWSASGGDGGGN-ERSTERVASGDGATAQRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEMTPTVESPRAEWEPSDDQHHGK------------AYAADQAPGGGDRSSDWGGWRRTRGGWCSATRDDDDGPHDREXXXXXXXXXXXXXXAPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEAD--KSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWYHFNDTITTKVSQDTVSSASPYILVYRRKRPSSSWGPGTQAQSMRPGAAPAVXXXXXXXXXXSLLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPPSMNAATNGSTPGAAAAVGGTIGAEAVGEPQPRLSIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGGSNS----ATKEMVAVPRGVHRSLVNRYGPRTPAVVAGKPSPLDATTGGVKVAVAPGESADRISVGRXXXXXXXMALVGSSRPLLELTSCTACAALEEERALLKSAEQKE 968
BLAST of mRNA_Ecto-sp13_S_contig712.18220.1 vs. uniprot
Match: A0A6G0UIR6_9BILA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Halicephalobus sp. NKZ332 TaxID=2598192 RepID=A0A6G0UIR6_9BILA) HSP 1 Score: 124 bits (310), Expect = 5.400e-25 Identity = 150/672 (22.32%), Postives = 235/672 (34.97%), Query Frame = 1
Query: 589 KGVVGLTNEGNFCYLNASLQALARCAPFRTHLVECVPGPNVA----GRPC---PLAFAMSKLYSEMWSDESGXXXXXXXXXXAETPAEVIRALVKGNRWFAGNGQHDAHEALRSILDLLHEELRRPVPVSF---EPGHAALTAAMXXXXXXXXXXXXXXXXXXXXXXXPATASLLDDPS--QNHHPSAQASXXXXDAGTDKNKRPKQGGKATPPATPADGVWSASGGDGGGNNERSTERVASGDGATAQR---DV-YWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGSASXXXXXXXXXXXXXXXXAPATAMRGDRHXXXXXXXXXXXXXXXGGAMTPTMESPRAEWEPSDVSEKRRGLGGRSATAVGGADGESEAAGGGDRSSDWGGWRRTRGGWCSATRDDXXXXXXXXXXXXXXXXXXXXXXAPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEAGEYKSTRLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFLPSSPAPVLYDLVGLVEHTG-GLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRRK 2553
+G+VGL N+GN CY+NA++QAL+ C P R + +P + G P P++ A +L ++WS+ A P + F G Q DA E +R LD+LH+ELR P + F E G++ ++ +S D+ + +N H S DAG K PK+ ++P + S ER S +T + DV + +S + F G L+ + C TC S+ + F D+S+ + S A +T ES + PS S+K++ + T + + + SS +++LEDCL AFFS + L G + Y C+ C K K RL PEIL +H+KRFR L++ KV RV FPL+DLD+ ++ LE + ++ ++ YDLV V H G G E GHY ++ R+D W+ F+D+ + + + V S Y+L Y++K
Sbjct: 44 RGLVGLFNQGNSCYMNAAIQALSNCPPLREYFRSYLPSTQASRDANGLPPVKKPVSDAFQELLMKIWSNHQ-------VRGNAIGPTLFSYRIKDRCAQFRGFTQQDAQEFIRCFLDILHQELRHPASIKFGSREVGNSLSSSC---------------------------SSSQDELNLGENDHFETADSGLSSDAGDSKPDAPKKVSTSSP------------------KPQSSPERARSPSESTTKSKKGDVQHSRSIITDVFDGELVSTVKCMTCHHLSNTRETFQDISLSIPTVEQISLLREGSTIELESSSSSSEAESTVD----------------------------ESTGSVDMPSPESKKKQIM---------------------------------------TTANQFSYAYWLIFFAKSWLIDSWLNHIINAYKFMFSS--------NISLEDCLYAFFSADHLHGEDMYSCEKCS--KLRNGVKQCRLTKLPEILCIHLKRFRHELLYNSKVGTRVTFPLYDLDMKPFVMHSVLEQADPEEFSTE------------------------------------------------------YDLVAFVSHRGAGAEFGHYVAFCRNDVDGNWYEFDDSFVSPIPEADVMSREAYVLFYQKK 532
BLAST of mRNA_Ecto-sp13_S_contig712.18220.1 vs. uniprot
Match: A0A6I9YL57_9SAUR (Ubiquitin carboxyl-terminal hydrolase n=5 Tax=Colubroidea TaxID=34989 RepID=A0A6I9YL57_9SAUR) HSP 1 Score: 123 bits (309), Expect = 6.450e-25 Identity = 149/684 (21.78%), Postives = 237/684 (34.65%), Query Frame = 1
Query: 586 VKGVVGLTNEGNFCYLNASLQALARCAPFRTHLVECVPGPNVAGRPCPLAFAMSKLYSEMWSDESGXXXXXXXXXXAETPAEVIRALVKGNRWFAGNGQHDAHEALRSILDLLHEELRRPVPVSFEPGHAALTAAMXXXXXXXXXXXXXXXXXXXXXXXPATASLLDDPSQNHHPSAQASXXXXDAGTDKNKRPKQGGKATPPATPADGVWSASGGDGGGNNERSTERVASGDGATAQ---------------------------RDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGSASXXXXXXXXXXXXXXXXAPATAMRGDRHXXXXXXXXXXXXXXXGGAMTPTMESPRAEWEPSDVSEKRRGLGGRSATAVGGADGESEAAGGGDRSSDWGGWRRTRGGWCSATRDDXXXXXXXXXXXXXXXXXXXXXXAPGYFGG-LVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEAGEYKSTRLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFLPSSPAPV-LYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRR 2550
+G+ GL N GN CY+NA+LQAL+ C P ++C +P + + KL +E+W A P + + + N F G Q DA E LR ++DLLHEEL+ V + + M P + S+ DDP++N A D T K+ R ++ T N+ TE+ +G TA+ ++ ++S ++ F G +L + C TC R S + F DLS+P+ P E D++ K +++ G+ GE+ A GW + + YF +VS + W +V L+DCL AFF+ + L+G N Y C+ C KK K ++ H PEIL +H+KRFR ++S K+ V FPL LD+ +L+ SPA + +YDL+ ++ H G +GHY +Y R++ + W+ F+D T+V++ T+ +A Y+L YR+
Sbjct: 150 ARGLTGLRNIGNTCYMNAALQALSNCPPLTQFFLDCGSLARTDKKPA-ICRSYYKLITELWHKSR---------PGAVVPTNLFQGIKAVNPTFRGYSQQDAQEFLRCLMDLLHEELKETVITIEDSNTTNIEERMEEEKCQSDADFQSCVNNDKVEKDPWSKSVADDPAEN------AMLIEEDGNTSKDYRKERSLCTKMNRT---------------NSMDDTEKDINGFRETAELLNNQETVKVQIHSRYSVPTAPSSKKKKNKKYRSVISDIFDGSILSSVQCLTCDRVSVTLETFQDLSLPI--------------------------------------------------------PGKE---------DLA-KLHSANHQTSLVKAGSCGEAYAP----------------QGWIAFFVE--------------------------YFKRFVVSCVPSWFWGPTVTLQDCLAAFFARDELKGDNMYSCEKC--KKLRNGVKFCKVQHFPEILCIHLKRFRHDLMFSTKIGTHVSFPLEGLDLQPFLAK-------------------------------------------------------------DSPAQIAVYDLLSVICHHGTAINGHYIAYCRNNLNNRWYEFDDQSVTEVTESTIQNAEAYVLFYRK 631
BLAST of mRNA_Ecto-sp13_S_contig712.18220.1 vs. uniprot
Match: A0A6J1V381_9SAUR (Ubiquitin carboxyl-terminal hydrolase n=8 Tax=Elapidae TaxID=8602 RepID=A0A6J1V381_9SAUR) HSP 1 Score: 122 bits (307), Expect = 1.120e-24 Identity = 149/674 (22.11%), Postives = 236/674 (35.01%), Query Frame = 1
Query: 586 VKGVVGLTNEGNFCYLNASLQALARCAPFRTHLVECVPGPNVAGRPCPLAFAMSKLYSEMWSDESGXXXXXXXXXXAETPAEVIRALVKGNRWFAGNGQHDAHEALRSILDLLHEELRRPVPVSFEPGHAALTAAMXXXXXXXXXXXXXXXXXXXXXXXPATASLLDDPSQNHHPSAQASXXXXDAGTDKNKRPKQGGKATPPATPADGVWSASGGDGGGNNERSTER-----------------VASGDGATAQRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGSASXXXXXXXXXXXXXXXXAPATAMRGDRHXXXXXXXXXXXXXXXGGAMTPTMESPRAEWEPSDVSEKRRGLGGRSATAVGGADGESEAAGGGDRSSDWGGWRRTRGGWCSATRDDXXXXXXXXXXXXXXXXXXXXXXAPGYFGG-LVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEAGEYKSTRLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFLPSSPAPV-LYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRR 2550
+G+ GL N GN CY+NA+LQAL+ C P ++C +P + + KL +E+W A P + + + N F G Q DA E LR ++DLLHEEL+ V + + M P + + DDP++N A D T K+ R K T + S + N+ R T V + + ++ ++S ++ F G +L + C TC R S + F DLS+P+ P E D++ K +++ G+ GE+ A GW + + YF +VS + W +V L+DCL AFF+ + L+G N Y C+ C KK K ++ H PEIL +H+KRFR ++S K+ V FPL LD+ +L+ SPA + +YDL+ ++ H G +GHYT+Y R++ + W+ F+D T+V++ T+ +A Y+L YR+
Sbjct: 150 ARGLTGLRNIGNTCYMNAALQALSNCPPLTQFFLDCGSLARTDKKPA-ICRSYYKLITELWHKSR---------PGAVVPTNLFQGIKAVNPTFRGYSQQDAQEFLRCLMDLLHEELKETVITVEDSNTTNVEERMEEEKCQSNADFQSCVNNDKLENDPWSKPVTDDPAEN------AMLIEEDENTSKDYR-----KERSLCTKMNRTNSMDDTEKDINSFRETVELLNNQETVKVQIHSRYSVPTAPSSKKKKSKKYRSVISDIFDGSILSSVQCLTCDRVSVTLETFQDLSLPI--------------------------------------------------------PGKE---------DLA-KLHSANHQTSLVKAGSCGEAYAP----------------QGWIAFFVE--------------------------YFKRFVVSCVPSWFWGPTVTLQDCLAAFFARDELKGDNMYSCEKC--KKLRNGVKFCKVQHFPEILCIHLKRFRHDLMFSTKIGTHVSFPLEGLDLQPFLAK-------------------------------------------------------------DSPAQIAVYDLLSVICHHGTAINGHYTAYCRNNLNNRWYEFDDQSVTEVTESTIQNAEAYVLFYRK 631
BLAST of mRNA_Ecto-sp13_S_contig712.18220.1 vs. uniprot
Match: UPI000EA85039 (ubiquitin carboxyl-terminal hydrolase 33 isoform X2 n=1 Tax=Pseudonaja textilis TaxID=8673 RepID=UPI000EA85039) HSP 1 Score: 121 bits (303), Expect = 3.320e-24 Identity = 145/673 (21.55%), Postives = 229/673 (34.03%), Query Frame = 1
Query: 586 VKGVVGLTNEGNFCYLNASLQALARCAPFRTHLVECVPGPNVAGRPCPLAFAMSKLYSEMWSDESGXXXXXXXXXXAETPAEVIRALVKGNRWFAGNGQHDAHEALRSILDLLHEELRRPVPVSFEPGHAALTAAMXXXXXXXXXXXXXXXXXXXXXXXPATASLLDDPSQNHHPSAQASXXXXDAGTDKNKRPKQGGKATPPATPADGVWSASGGDGGGNNERSTER-----------------VASGDGATAQRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGSASXXXXXXXXXXXXXXXXAPATAMRGDRHXXXXXXXXXXXXXXXGGAMTPTMESPRAEWEPSDVSEKRRGLGGRSATAVGGADGESEAAGGGDRSSDWGGWRRTRGGWCSATRDDXXXXXXXXXXXXXXXXXXXXXXAPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEAGEYKSTRLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFLPSSPAPV-LYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRR 2550
+G+ GL N GN CY+NA+LQAL+ C P ++C +P + + KL +E+W A P + + + N F G Q DA E LR ++DLLHEEL+ V + + M P + + DDP++N A D T K+ R K T + S + N+ R T V + + ++ ++S ++ F G +L + C TC R S + F DLS+P+ P E D++ K +++ G+ GE+ A G+ V W +V L+DCL AFF+ + L+G N Y C+ C KK K ++ H PEIL +H+KRFR ++S K+ V FPL LD+ +L+ SPA + +YDL+ ++ H G +GHYT+Y R++ + W+ F+D T+V++ T+ +A Y+L YR+
Sbjct: 150 ARGLTGLRNIGNTCYMNAALQALSNCPPLTQFFLDCGSLARTDKKPA-ICRSYYKLITELWHKSR---------PGAVVPTNLFQGIKAVNPTFRGYSQQDAQEFLRCLMDLLHEELKETVITVEDSNTTNVEERMEEEKCQSDADFQSCVNNDKLETDPWSKPVADDPAEN------AMLIEEDENTSKDYR-----KERSLCTKMNRTNSMDDTEKDINSFRETVELLNNQETVKVQIHSRYSVPTAPSSKKKKSKKYRSVISDIFDGSILSSVQCLTCDRVSVTLETFQDLSLPI--------------------------------------------------------PGKE---------DLA-KLHSANHQTSLVKAGSCGEAYAP-------------------------------------------------QGWIAFFVEYFKSWFWGPTVTLQDCLAAFFARDELKGDNMYSCEKC--KKLRNGVKFCKVQHFPEILCIHLKRFRHDLMFSTKIGTHVSFPLEGLDLQPFLAK-------------------------------------------------------------DSPAQIAVYDLLSVICHHGTAINGHYTAYCRNNLNNRWYEFDDQSVTEVTESTIQNAEAYVLFYRK 623
BLAST of mRNA_Ecto-sp13_S_contig712.18220.1 vs. uniprot
Match: A0A0F7Z2A8_CROAD (Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Crotalus TaxID=8728 RepID=A0A0F7Z2A8_CROAD) HSP 1 Score: 120 bits (301), Expect = 5.850e-24 Identity = 148/674 (21.96%), Postives = 236/674 (35.01%), Query Frame = 1
Query: 586 VKGVVGLTNEGNFCYLNASLQALARCAPFRTHLVECVPGPNVAGRPCPLAFAMSKLYSEMWSDESGXXXXXXXXXXAETPAEVIRALVKGNRWFAGNGQHDAHEALRSILDLLHEELRRPVPVSFEPGHAALTAAMXXXXXXXXXXXXXXXXXXXXXXXPATASLLDDPSQNHHPSAQASXXXXDAGTDKNKRPKQGGKATPPATPADGVWSASGGDGGGNNERSTERVASGD-----------------GATAQRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGSASXXXXXXXXXXXXXXXXAPATAMRGDRHXXXXXXXXXXXXXXXGGAMTPTMESPRAEWEPSDVSEKRRGLGGRSATAVGGADGESEAAGGGDRSSDWGGWRRTRGGWCSATRDDXXXXXXXXXXXXXXXXXXXXXXAPGYFGG-LVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEAGEYKSTRLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFLPSSPAPV-LYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRR 2550
+G+ GL N GN CY+NA+LQAL+ C P ++C +P + + KL +E+W A P + + + N F G Q DA E LR ++DLLHEEL+ V ++ E P + + DDP++N A D T K+ R K T + S + N+ R T + + + +++ ++S ++ F G +L + C TC R S + F DLS+P+ P E D++ K +++ G+ GE+ A GW + + YF +VS + W +V L+DCL AFF+ + L+G N Y C+ C KK K ++ H PEIL +H+KRFR ++S K+ V FPL LD+ +L+ SPA + +YDL+ ++ H G +GHY +Y R++ + W+ F+D T+V++ TV +A Y+L YR+
Sbjct: 150 ARGLTGLRNIGNTCYMNAALQALSNCPPLTQFFLDCGSLARTDKKPA-ICRSYYKLITELWHKSR---------PGAVVPTNLFQGIKAVNPTFRGYSQQDAQEFLRCLMDLLHEELKETV-ITGEDNSTTTVEERMEEEKCPPDADVQCINDDKVENDPWSKPVADDPAEN------AMLIEEDENTSKDYR-----KERSLGTKMNRTNSTDNTEKDINSFRETAELLNNQETVKVQIHSRYSVPTAFSSKKKKNKKYRSVISDIFDGSILSSVQCLTCDRVSVTLETFQDLSLPI--------------------------------------------------------PGKE---------DLA-KLHSANHQTSLVKAGSCGEAYAP----------------QGWIAFFVE--------------------------YFKRFVVSCVPSWFWGPTVTLQDCLAAFFARDELKGDNMYSCEKC--KKLRNGVKFCKVQHFPEILCIHLKRFRHDLMFSTKIGTHVSFPLEGLDLQPFLTK-------------------------------------------------------------DSPAQIAIYDLLSVICHHGTAINGHYIAYCRNNLNNRWYEFDDQSVTEVTESTVQNAEAYVLFYRK 630
BLAST of mRNA_Ecto-sp13_S_contig712.18220.1 vs. uniprot
Match: A0A6P9DL03_PANGU (Ubiquitin carboxyl-terminal hydrolase n=6 Tax=Serpentes TaxID=8570 RepID=A0A6P9DL03_PANGU) HSP 1 Score: 119 bits (299), Expect = 1.040e-23 Identity = 144/663 (21.72%), Postives = 234/663 (35.29%), Query Frame = 1
Query: 586 VKGVVGLTNEGNFCYLNASLQALARCAPFRTHLVECVPGPNVAGRPCPLAFAMSKLYSEMWSDESGXXXXXXXXXXAETPAEVIRALVKGNRWFAGNGQHDAHEALRSILDLLHEELRRPVPVSFEPGHAALTAAMXXXXXXXXXXXXXXXXXXXXXXXPATASLLDDPSQNHHPSAQASXXXXDAGTDKNKRPKQGGKATPPATPADGVWSASGGDGGGNNE------RSTERVASGDGATAQRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGSASXXXXXXXXXXXXXXXXAPATAMRGDRHXXXXXXXXXXXXXXXGGAMTPTMESPRAEWEPSDVSEKRRGLGGRSATAVGGADGESEAAGGGDRSSDWGGWRRTRGGWCSATRDDXXXXXXXXXXXXXXXXXXXXXXAPGYFGG-LVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEAGEYKSTRLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFLPSSPAPV-LYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRR 2550
+G+ GL N GN CY+NA+LQAL+ C P ++C +P + + KL +E+W A P + + + N F G Q DA E LR ++DLLHEEL+ V + + M P + + DDP++N + D +++ K + T D + N E S V + + +++ ++S ++ F G +L + C TC R S + F DLS+P+ P E D++ K +++ G+ GE+ A GW + + YF +VS + W +V L+DCL AFF+ + L+G N Y C+ C KK K ++ H PEIL +H+KRFR ++S K+ V FPL LD+ +L+ SPA + +YDL+ ++ H G +GHY +Y R++ + W+ F+D T+V++ T+ +A Y+L YR+
Sbjct: 166 ARGLTGLRNIGNTCYMNAALQALSNCPPLTQFFLDCGSLARTDKKPA-ICRSYYKLITELWHKSR---------PGAVVPTNLFQGIKAVNPTFRGYSQQDAQEFLRCLMDLLHEELKETVITLEDSNTTNVEERMEEEKCQSDTDFQSCVNNDKVENDPWSKPMADDPAENAMLIEEDGNISKDYRKERSLCTKMNRTNSMDDTEKDINSFRETAELLNNQETVKVQIHSRYSVPTMPSSKKKKNKKYRSVISDIFDGSILSSVQCLTCDRVSVTLETFQDLSLPI--------------------------------------------------------PGKE---------DLA-KLHSANHQTSLVKAGSCGEAYAP----------------QGWIAFFVE--------------------------YFKRFVVSCVPSWFWGPTVTLQDCLAAFFARDELKGDNMYSCEKC--KKLRNGVKFCKVQHFPEILCIHLKRFRHDLMFSTKIGTHVSFPLEGLDLQPFLAK-------------------------------------------------------------DSPAQIAVYDLLSVICHHGTAINGHYIAYCRNNLNNRWYEFDDQSVTEVTESTIQNAEAYVLFYRK 647
BLAST of mRNA_Ecto-sp13_S_contig712.18220.1 vs. uniprot
Match: A0A670YGZ9_PSETE (Ubiquitin carboxyl-terminal hydrolase n=8 Tax=Colubroidea TaxID=34989 RepID=A0A670YGZ9_PSETE) HSP 1 Score: 118 bits (295), Expect = 2.930e-23 Identity = 144/679 (21.21%), Postives = 229/679 (33.73%), Query Frame = 1
Query: 586 VKGVVGLTNEGNFCYLNASLQALARCAPFRTHLVECVPGPNVAGRPCPLAFAMSKLYSEMWSDESGXXXXXXXXXXAETPAEVIRALVKGNRWFAGNGQHDAHEALRSILDLLHEELRRPVPVSFEPGHAALTAAMXXXXXXXXXXXXXXXXXXXXXXXPATASLLDDPSQNHHPSAQASXXXXDAGTDKNKRPKQGGKATPPATPADGVWSASGGDGGGNNERSTERVASGD-----------------------GATAQRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGSASXXXXXXXXXXXXXXXXAPATAMRGDRHXXXXXXXXXXXXXXXGGAMTPTMESPRAEWEPSDVSEKRRGLGGRSATAVGGADGESEAAGGGDRSSDWGGWRRTRGGWCSATRDDXXXXXXXXXXXXXXXXXXXXXXAPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEAGEYKSTRLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFLPSSPAPV-LYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRR 2550
+G+ GL N GN CY+NA+LQAL+ C P ++C +P + + KL +E+W A P + + + N F G Q DA E LR ++DLLHEEL+ V + + M P + + DDP++N A D T K+ R K T + S + N+ R T + + + ++ ++S ++ F G +L + C TC R S + F DLS+P+ P E D++ K +++ G+ GE+ A G+ V W +V L+DCL AFF+ + L+G N Y C+ C KK K ++ H PEIL +H+KRFR ++S K+ V FPL LD+ +L+ SPA + +YDL+ ++ H G +GHYT+Y R++ + W+ F+D T+V++ T+ +A Y+L YR+
Sbjct: 129 ARGLTGLRNIGNTCYMNAALQALSNCPPLTQFFLDCGSLARTDKKPA-ICRSYYKLITELWHKSR---------PGAVVPTNLFQGIKAVNPTFRGYSQQDAQEFLRCLMDLLHEELKETVITVEDSNTTNVEERMEEEKCQSDADFQSCVNNDKLETDPWSKPVADDPAEN------AMLIEEDENTSKDYR-----KERSLCTKMNRTNSMDDTEKDINSFRETVELLNNQETVKVQIHSRYSEPSLWTLPTAPSSKKKKSKKYRSVISDIFDGSILSSVQCLTCDRVSVTLETFQDLSLPI--------------------------------------------------------PGKE---------DLA-KLHSANHQTSLVKAGSCGEAYAP-------------------------------------------------QGWIAFFVEYFKSWFWGPTVTLQDCLAAFFARDELKGDNMYSCEKC--KKLRNGVKFCKVQHFPEILCIHLKRFRHDLMFSTKIGTHVSFPLEGLDLQPFLAK-------------------------------------------------------------DSPAQIAVYDLLSVICHHGTAINGHYTAYCRNNLNNRWYEFDDQSVTEVTESTIQNAEAYVLFYRK 608
BLAST of mRNA_Ecto-sp13_S_contig712.18220.1 vs. uniprot
Match: A0A2D4PDP6_MICSU (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=4 Tax=Micrurus surinamensis TaxID=129470 RepID=A0A2D4PDP6_MICSU) HSP 1 Score: 116 bits (290), Expect = 1.140e-22 Identity = 143/673 (21.25%), Postives = 229/673 (34.03%), Query Frame = 1
Query: 586 VKGVVGLTNEGNFCYLNASLQALARCAPFRTHLVECVPGPNVAGRPCPLAFAMSKLYSEMWSDESGXXXXXXXXXXAETPAEVIRALVKGNRWFAGNGQHDAHEALRSILDLLHEELRRPVPVSFEPGHAALTAAMXXXXXXXXXXXXXXXXXXXXXXXPATASLLDDPSQNHHPSAQASXXXXDAGTDKNKRPKQGGKATPPATPADGVWSASGGDGGGNNERSTER-----------------VASGDGATAQRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGSASXXXXXXXXXXXXXXXXAPATAMRGDRHXXXXXXXXXXXXXXXGGAMTPTMESPRAEWEPSDVSEKRRGLGGRSATAVGGADGESEAAGGGDRSSDWGGWRRTRGGWCSATRDDXXXXXXXXXXXXXXXXXXXXXXAPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEAGEYKSTRLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFLPSSPAPV-LYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRR 2550
+G+ GL N GN CY+NA+LQAL+ C P ++C +P + + KL +E+W A P + + + N F G Q DA E LR ++DLLHEEL+ V ++ E + P + + DDP++N A D T K R ++ T + S + N+ R T V + + ++ ++S ++ F G +L + C TC R S + F DLS+P+ P E D++ K +++ G+ GE+ A G+ V W +V L+DCL AFF+ + L+G N Y C+ C KK K ++ H PEIL +H+KRFR ++S K+ V FPL LD+ +L+ SPA + +YDL+ ++ H G +GHY +Y R++ + W+ F+D T+V++ T+ +A Y+L YR+
Sbjct: 155 ARGLTGLRNIGNTCYMNAALQALSNCPPLTQFFLDCGSLARTDKKPA-ICRSYYKLITELWHKSR---------PGAVVPTNLFQGIKAVNPTFRGYSQQDAQEFLRCLMDLLHEELKETV-ITVEDSNTTNVEERMEEEKCQSDADFQSCVNDKLENDPWSKPVPDDPAEN------AMLIEEDENTSKGYRRERS-----LCTKMNRTNSMDDTEKDTNSFRETAELLNNQETVKVQIHSRYSVPTAPSSKKKKRKKYRSVISDIFDGSILSSVQCLTCDRVSVTLETFQDLSLPI--------------------------------------------------------PGKE---------DLA-KLHSANHQTSLVKAGSCGEAYAP-------------------------------------------------QGWIAFFVEYFKSWFWGPTVTLQDCLAAFFARDELKGDNMYSCEKC--KKLRNGVKFCKVQHFPEILCIHLKRFRHDLMFSTKIGTHVSFPLEGLDLQPFLAK-------------------------------------------------------------DSPAQIAVYDLLSVICHHGTAINGHYIAYCRNNLNNRWYEFDDQSVTEVTESTIQNAEAYVLFYRK 627 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig712.18220.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig712.18220.1 >prot_Ecto-sp13_S_contig712.18220.1 ID=prot_Ecto-sp13_S_contig712.18220.1|Name=mRNA_Ecto-sp13_S_contig712.18220.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1117bp MPAREGSRVATRRQRPRTAPDLSLSPIGKGIASNANENGNVSRPSRPGAAback to top mRNA from alignment at Ecto-sp13_S_contig712:12278..20761- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig712.18220.1 ID=mRNA_Ecto-sp13_S_contig712.18220.1|Name=mRNA_Ecto-sp13_S_contig712.18220.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8484bp|location=Sequence derived from alignment at Ecto-sp13_S_contig712:12278..20761- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig712:12278..20761- >mRNA_Ecto-sp13_S_contig712.18220.1 ID=mRNA_Ecto-sp13_S_contig712.18220.1|Name=mRNA_Ecto-sp13_S_contig712.18220.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3351bp|location=Sequence derived from alignment at Ecto-sp13_S_contig712:12278..20761- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |