mRNA_Ecto-sp13_S_contig7074.18152.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7074.18152.1 vs. uniprot
Match: D7FT75_ECTSI (Vacuolar protein 8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT75_ECTSI) HSP 1 Score: 265 bits (678), Expect = 7.210e-75 Identity = 308/349 (88.25%), Postives = 311/349 (89.11%), Query Frame = 2
Query: 2 SQRYSTLALCNLSSGEHKARIVSEGAVRPLTFLARFPDLEIQRYAALAIAGLALGDHGKPPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSTKSAVMHEDGLFPLLELVNSDDGDCVRTAVYALGSLCESDPVKARLVELGAVVNVVGQASFGDIEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMMAVEAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLGRARSTDEELQYKAALTVGHLASNAVKLLPKGKEKANIGFGATVLQSNTDSKARRAQKQTQEHLD 1048
SQRYSTLALCNLSSGEHKAR GKPPN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSTK+AVMHEDGLFPLLELVNSDDGDCVRTAVYALGSLCESDPVKARL+ELGAVVNVVGQASFGDIEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMMAVEAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLGRARSTDEELQYKAALTVGHLASNAVKLLPKGKEKANIGFGATVLQSNTDSKARRAQKQTQEHL+
Sbjct: 3427 SQRYSTLALCNLSSGEHKARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKPPNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSTKTAVMHEDGLFPLLELVNSDDGDCVRTAVYALGSLCESDPVKARLIELGAVVNVVGQASFGDIEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMMAVEAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLGRARSTDEELQYKAALTVGHLASNAVKLLPKGKEKANIGFGATVLQSNTDSKARRAQKQTQEHLE 3775
BLAST of mRNA_Ecto-sp13_S_contig7074.18152.1 vs. uniprot
Match: T0SIR8_SAPDV (Vacuolar protein 8 n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0SIR8_SAPDV) HSP 1 Score: 117 bits (292), Expect = 3.460e-24 Identity = 228/351 (64.96%), Postives = 267/351 (76.07%), Query Frame = 2
Query: 2 SQRYSTLALCNLSSGEHKARIVSEGAVRPLTFLARFPDLEIQRYAALAIAGLALGDHGKPPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSTKSAVMHEDGLFPLLELVNSDDGDCVRTAVYALGSLCESDPVKARLVELGAVVNVVGQASFGDIEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMMAVEAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLGRARSTDEELQYKAALTVGHLASNAVKLLPKGKEKAN-IGFGATVLQSNTDS-KARRAQKQTQEHLD 1048
SQRYSTLA+CNL+SG K IV GAVRPL L RFPD EI AGLALGDHG NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++ D +CVR A+Y +GS+ E V +L+ELGA+ ++V Q+ D+E XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++M+V AEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXX RARSTDEELQYKA++++G LA+NA K++PKG+ + +G GA+ + + T+ +AR+A++ T E+++
Sbjct: 3347 SQRYSTLAICNLASGPDKVAIVEAGAVRPLLHLVRFPDHEIXXXXXXXXAGLALGDHGH--NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASDMECVRIALYCVGSIAEHIDVLTKLLELGALAHIVHQSRQPDLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGALRPLIAIMSVNAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARARSTDEELQYKASMSLGQLAANATKVMPKGRHSNDGVGAGASRMAATTEQLQARKARETTTEYIE 3695
BLAST of mRNA_Ecto-sp13_S_contig7074.18152.1 vs. uniprot
Match: A0A482RX95_9ARCH (Vacuolar protein 8 (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RX95_9ARCH) HSP 1 Score: 103 bits (258), Expect = 6.500e-20 Identity = 183/319 (57.37%), Postives = 215/319 (67.40%), Query Frame = 2
Query: 2 SQRYSTLALCNLSSGEHKARIVSEGAVRPLTFLARFPDLEIQRYAALAIAGLALGDHGKPPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSTKSAVMHEDGLFPLLELVNSDD--GDCVRTAVYALGSLCESDPVKARLVELGAVVNVVGQASFGDIEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMMAVEAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLGRARSTDEELQYKAALTVGHLASNAVKLLPKGK 952
SQRY+TL LCNL + + K ++ +G +RPL FL FPD EIQRYA+LA+AG+ALG K + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++ + D + AVY LGS+CE + VK R V+ + VV S GD+E+K XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +M++ +AEP+H LRLGR R+TD++LQYKAALT+G LA+NAVKLLP +
Sbjct: 1519 SQRYATLTLCNLCASQMKGLLLEQGVLRPLIFLMHFPDPEIQRYASLALAGVALGT--KSVSKVQIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNILQREHLGRDLLHAAVYCLGSICEHEDVKMRFVDSHGIQLVVRHLSTGDMEMKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVRPLVTMLSSDAEPKHYAGLALLKLADNFENHLRIAEEGGIQALLRLGRTRTTDDQLQYKAALTLGQLATNAVKLLPNAQ 1835
BLAST of mRNA_Ecto-sp13_S_contig7074.18152.1 vs. uniprot
Match: A0A6A4ZFQ5_9STRA (Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZFQ5_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 5.530e-19 Identity = 205/362 (56.63%), Postives = 240/362 (66.30%), Query Frame = 2
Query: 2 SQRYSTLALCNLSSGEHKARIVSEG----AVRPLTFLARFPDLEIQRYAALAIAGLALGDHGKPPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSTKSAVMHEDGLFPLLELVNSDDGDCVRTAVYALGSLCESDPVKARLVELGAVVNVVGQASFGDIEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMMAVEAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLGRARSTDEELQYKAALTVGHLASNAVKLLPKGK-EKANIGFGATVLQSNTDS-KARRAQKQTQEHLDHVADERK 1069
SQR+STLA+CNLS G+ KA IV AVRPL L DHG N XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +S D +C+R A+Y +GSL E+ V +L+ELGA+ N+V Q D+EV+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MM+V AEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXX R+ RARSTDEELQYKA++++G LASNA KL+PKGK ++G A+ + + T+ +AR+A++QTQE+L+ + K
Sbjct: 64 SQRFSTLAVCNLSCGDDKAFIVXXXXXXXAVRPLMHLVXXXXXXXXXXXXXXXXXXXXXDHGS--NKIRMIEDGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSADLECIRIAIYCIGSLAENMDVLVKLIELGALANIVHQCRLPDLEVRRNCGYFFALVVEHHEFHDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMSVNAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIARARSTDEELQYKASMSLGQLASNATKLIPKGKLSNDSVGGSASRMAAATEHLQARKAREQTQEYLEKKIQKEK 423
BLAST of mRNA_Ecto-sp13_S_contig7074.18152.1 vs. uniprot
Match: A0A067BT72_SAPPC (Vacuolar protein 8 (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BT72_SAPPC) HSP 1 Score: 97.1 bits (240), Expect = 9.270e-18 Identity = 105/171 (61.40%), Postives = 119/171 (69.59%), Query Frame = 2
Query: 2 SQRYSTLALCNLSSGEHKARIVSEGAVRPLTFLARFPDLEIQRYAALAIAGLALGDHGKPPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSTKSAVMHEDGLFPLLELVNSDDGDCVRTAVYALGSLCESDPVKARLVELGAVVNVVGQASFGDIEVK 514
SQRYSTLA+CNL+SG K IV GAVRPL L RFPD EIQRYAALA+AGLAL DHG NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +CVR A+Y +GS+ E V +L+ELGA+V++V + D+EVK
Sbjct: 582 SQRYSTLAICNLASGPDKVAIVETGAVRPLLHLVRFPDHEIQRYAALALAGLALSDHGH--NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIECVRIALYCVGSIAEHMDVLTKLLELGALVHIVHHSRQPDLEVK 750
BLAST of mRNA_Ecto-sp13_S_contig7074.18152.1 vs. uniprot
Match: A0A2R5GK93_9STRA (Vacuolar protein 8 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GK93_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.740e-17 Identity = 141/195 (72.31%), Postives = 155/195 (79.49%), Query Frame = 2
Query: 362 LVNSDDGDCVRTAVYALGSLCESDPVKARLVELGAVVNVVGQASFGDIEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMMAVEAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLGRARSTDEELQYKAALTVGHLASNAVKLLPK 946
+ NS D CVRTA+Y +G CE++ VKAR++E G +V V+ QA+ GD+EVK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +MM+ +AEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRL RARSTDEELQYKAALTVGHLASNAVK LPK
Sbjct: 3531 VANSRDLMCVRTALYCIGCCCETEEVKARIMEQGGLVTVLSQAANGDMEVKRNCGYVLALLAESMVYHDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRPLVAMMSTQAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLARARSTDEELQYKAALTVGHLASNAVKFLPK 3725
BLAST of mRNA_Ecto-sp13_S_contig7074.18152.1 vs. uniprot
Match: A0A485LIX7_9STRA (Vacuolar protein 8 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIX7_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 2.320e-17 Identity = 103/235 (43.83%), Postives = 135/235 (57.45%), Query Frame = 2
Query: 371 SDDGDCVRTAVYALGSLCESDPVKARLVELGAVVNVVGQASFGDIEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMMAVEAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLGRARSTDEELQYKAALTVGHLASNAVKLLPKGKEKAN-IGFGATVLQSNTDS-KARRAQKQTQEHLDHVADERK 1069
S D +C+R A+Y LGSL E+ V +L+ELGA+ N+V Q D+EV+ XXX X SMM+V AEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLR+ RARSTDEELQYKA++++G LASNA KL+PKGK + +G GA+ + + T++ +AR+A++QTQ++L+ + K
Sbjct: 3471 STDLECIRIAIYCLGSLGENMDVLLKLIELGALANLVHQCRLPDLEVRRSCGYFFALVVEHHEFHDDFVSEGGMTTVISLASIEXXXCQEYATFGLAHLASNRDYQVKLVEHXALRPLISMMSVNAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRIARARSTDEELQYKASMSLGQLASNATKLIPKGKLTNDAVGGGASRMAAATENLQARKAREQTQDYLEKKIQKEK 3705
BLAST of mRNA_Ecto-sp13_S_contig7074.18152.1 vs. uniprot
Match: A0A7S2HPT1_9STRA (Vacuolar protein 8 (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HPT1_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 3.400e-17 Identity = 97/168 (57.74%), Postives = 121/168 (72.02%), Query Frame = 2
Query: 5 QRYSTLALCNLSSGEHKARIVSEGAVRPLTFLARFPDLEIQRYAALAIAGLALGDHGKPPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSTKSAVMHEDGLFPLLELVNSDDGDCVRTAVYALGSLCESDPVKARLVELGAVVNVVGQASFGDIE 508
QRY++L L N+SS +K +IV GAV+PL FLARFPDL++++YAALA+ GLALG+HG+ N XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V+ D + A+YALG+L E VK+++VE+GA+ +VV + GDIE
Sbjct: 307 QRYASLTLANISSSPYKVQIVEGGAVKPLMFLARFPDLDVRKYAALALGGLALGNHGE--NKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDGTDSESSCMAIYALGTLTEHKDVKSKIVEIGAIASVVERGDGGDIE 472
BLAST of mRNA_Ecto-sp13_S_contig7074.18152.1 vs. uniprot
Match: A0A7S2XVB4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVB4_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.360e-16 Identity = 44/72 (61.11%), Postives = 56/72 (77.78%), Query Frame = 2
Query: 845 LRLGRARSTDEELQYKAALTVGHLASNAVKLLPKGKEKAN-----IGFGATVLQSNTDSKARRAQKQTQEHL 1045
LRLGRARSTDEELQYKAALTVGHLASNAVK+LPKGK K + +GFG +V+QS +++ + QT++ +
Sbjct: 36 LRLGRARSTDEELQYKAALTVGHLASNAVKMLPKGKGKGSGLSEEVGFGISVMQSRAQEASKKGRDQTKDFI 107
BLAST of mRNA_Ecto-sp13_S_contig7074.18152.1 vs. uniprot
Match: A0A397F5W8_9STRA (Vacuolar protein 8 (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397F5W8_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.650e-16 Identity = 148/236 (62.71%), Postives = 180/236 (76.27%), Query Frame = 2
Query: 368 NSDDGDCVRTAVYALGSLCESDPVKARLVELGAVVNVVGQASFGDIEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMMAVEAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLGRARSTDEELQYKAALTVGHLASNAVKLLPKGK-EKANIGFGATVLQSNTDS-KARRAQKQTQEHLDHVADERK 1069
+S D +C+R A+Y +GSL E+ V +L+ELGA+ N+V Q D+EV+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MM+V AEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXX R+ RARSTDEELQYKA++++G LASNA KL+PKGK ++G A+ + + T+ +AR+A++QTQE+L+ + K
Sbjct: 2179 SSADLECIRIAIYCIGSLAENMDVLVKLIELGALANIVHQCRLPDLEVRRNCGYFFALVVEHHEFHDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMSVNAEPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIARARSTDEELQYKASMSLGQLASNATKLIPKGKLSNDSVGGSASRMAAATEHLQARKAREQTQEYLEKKIQKEK 2414 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7074.18152.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7074.18152.1 >prot_Ecto-sp13_S_contig7074.18152.1 ID=prot_Ecto-sp13_S_contig7074.18152.1|Name=mRNA_Ecto-sp13_S_contig7074.18152.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=320bp MHEDGLFPLLELVNSDDGDCVRTAVYALGSLCESDPVKARLVELGAVVNVback to top mRNA from alignment at Ecto-sp13_S_contig7074:2336..4053+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7074.18152.1 ID=mRNA_Ecto-sp13_S_contig7074.18152.1|Name=mRNA_Ecto-sp13_S_contig7074.18152.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1718bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7074:2336..4053+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7074:2336..4053+ >mRNA_Ecto-sp13_S_contig7074.18152.1 ID=mRNA_Ecto-sp13_S_contig7074.18152.1|Name=mRNA_Ecto-sp13_S_contig7074.18152.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=960bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7074:2336..4053+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |