mRNA_Ecto-sp13_S_contig705.18117.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig705.18117.1 vs. uniprot
Match: D8LH66_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH66_ECTSI) HSP 1 Score: 276 bits (707), Expect = 6.150e-92 Identity = 145/165 (87.88%), Postives = 155/165 (93.94%), Query Frame = 1
Query: 1 MPSTLSKSSGSADPTIATTDIDRRCGDTNQTPLMVASVVGSSRVVRDLLRQGASVSVADSDGYTALHHSVHHKNLAVSKDLIEAGADLEARPGGVYDTPLHVAATKGFCQGMVVLMDSRLDDGSTPLFVAASDGRLEAVKILLRASANPLLSAYGSLPLYMAVYN 495
MPSTLSK+SGS DPTIATT IDR CGDTNQTPLMVASV+GSSRVVRDLLRQGASVSVADSDG TALHHSV+H +LAVSKDLIEAGADLEAR GG DTPLHVAATKGFCQGM +LMDSRLDDG+TPLF+AASDGRLEAV++LLRA+ANPLLSA GSLPLYMAVYN
Sbjct: 1 MPSTLSKASGSIDPTIATTGIDRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGCTALHHSVYHNHLAVSKDLIEAGADLEARHGG-KDTPLHVAATKGFCQGMKLLMDSRLDDGATPLFLAASDGRLEAVRVLLRANANPLLSACGSLPLYMAVYN 164
BLAST of mRNA_Ecto-sp13_S_contig705.18117.1 vs. uniprot
Match: A0A6H5JHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE) HSP 1 Score: 260 bits (665), Expect = 4.340e-82 Identity = 143/217 (65.90%), Postives = 153/217 (70.51%), Query Frame = 1
Query: 1 MPSTLSKSSGSADPTIATTDIDRRCGDTNQTPLMVASVVGSSRVVRDLLRQGASVSVADSDGYTALHHSVHHKNLAVSKDLIEAGADLEARPGGVYDTPLHVAATKGFCQGMVVLMDSRLDDGSTPLFVAASDGRLEAVKIL-----LRASANPLLSAYGSLPLYMAVYNGHLKVVSELVHWYGVDRCTSDGGALALATAASRKHVDIVTFLCDAGV 636
MPSTLSK+SGS + +ATTDIDRRCGDTN TPLMVASV+GSSRVV+DLLRQGASVSVADSDGYTALHHSV+H++LAVS LIEAGADLEARPG LRA+ANPLLSAYGSLPL AVYNGHLKVVSELVHWYG DRCT+DGG LALATAASRKHVDIVTFLCDAGV
Sbjct: 1 MPSTLSKASGSVERAVATTDIDRRCGDTNHTPLMVASVIGSSRVVKDLLRQGASVSVADSDGYTALHHSVYHRHLAVSISLIEAGADLEARPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRANANPLLSAYGSLPLGTAVYNGHLKVVSELVHWYGTDRCTNDGGVLALATAASRKHVDIVTFLCDAGV 217
BLAST of mRNA_Ecto-sp13_S_contig705.18117.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE) HSP 1 Score: 234 bits (597), Expect = 1.080e-68 Identity = 133/217 (61.29%), Postives = 142/217 (65.44%), Query Frame = 1
Query: 1 MPSTLSKSSGSADPTIATTDIDRRCGDTNQTPLMVASVVGSSRVVRDLLRQGASVSVADSDGYTALHHSVHHKNLAVSKDLIEAGADLEARPGGVYDTPLHVAATKGFCQGMVVLMDSRLDDGSTPLFVAASDGRLEAVKILLR-----ASANPLLSAYGSLPLYMAVYNGHLKVVSELVHWYGVDRCTSDGGALALATAASRKHVDIVTFLCDAGV 636
MPSTLSK+SGSADPTIATTDIDRRCG TNQTPLMVASV+GSSRVVRDLLRQGASVSVADSDGYTALHH+V+HK+LAVSK A+ANPLLSAYGSLPL MAVY+GHL+VV ELVHWYG DRCTSDGGALALATAASRKHVDIV FLC+AGV
Sbjct: 422 MPSTLSKASGSADPTIATTDIDRRCGGTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANANPLLSAYGSLPLGMAVYHGHLEVVRELVHWYGTDRCTSDGGALALATAASRKHVDIVAFLCNAGV 638
BLAST of mRNA_Ecto-sp13_S_contig705.18117.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE) HSP 1 Score: 232 bits (592), Expect = 3.830e-68 Identity = 131/210 (62.38%), Postives = 140/210 (66.67%), Query Frame = 1
Query: 25 SGSADPTIATTDIDRRCGDTNQTPLMVASVVGSSRVVRDLLRQGASVSVADSDGYTALHHSVHHKNLAVSKDLIEAGADLEARPGGVYDTPLHVAATKGFCQGMVVLMDSRLDDGSTPLFVAASDGRLEAVKILLRASA------NPLLSAYGSLPLYMAVYNGHLKVVSELVHWYGVDRCTSDGGALALATAASRKHVDIVTFLCDAGV 636
SGS + IATTDIDRRCGDTNQTPLMVASV+GSSRVVRDLLRQGASVS+ADSDGY ALHH+V+HK+LAVSKDLIEAGADL+ARPGG+ DTPLHVAATKGFCQ M NPLLSA ELV+WYG D CTSDGGALALATAASR VDIVTFLCDAGV
Sbjct: 399 SGSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGI-DTPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSADXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGV 607
BLAST of mRNA_Ecto-sp13_S_contig705.18117.1 vs. uniprot
Match: A0A6H5L5L0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L0_9PHAE) HSP 1 Score: 198 bits (503), Expect = 1.220e-57 Identity = 120/218 (55.05%), Postives = 127/218 (58.26%), Query Frame = 1
Query: 1 MPSTLSKSSGSADPTIATTDIDRRCGDTNQTPLMVASVVGSSRVVRDLLRQGASVSVADSDGYTALHHSVHHKNLAVSKDLIEAGADLEARPGGVYDTPLHVAATKGFCQGMVVLMDSRLDDGSTPLFVAASDGRLEAVKILLRASANPL-----LSAYGSLPLY-MAVYNGHLKVVSELVHWYGVDRCTSDGGALALATAASRKHVDIVTFLCDAGV 636
MPSTLSK+SGSADPTIATTDIDRRCGDTNQTPLMVASV+G SRVVRDLLRQGASVSVADSDGYTALHH+V+HK+LAVSK LSAYGSLPLY M ELV+WYG+DRCTSDGGALAL TAASRKHVDIVTFL DAGV
Sbjct: 7 MPSTLSKASGSADPTIATTDIDRRCGDTNQTPLMVASVIGPSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAYGSLPLYIMXXXXXXXXXXRELVYWYGIDRCTSDGGALALVTAASRKHVDIVTFLRDAGV 224
BLAST of mRNA_Ecto-sp13_S_contig705.18117.1 vs. uniprot
Match: A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE) HSP 1 Score: 182 bits (462), Expect = 3.720e-52 Identity = 104/208 (50.00%), Postives = 135/208 (64.90%), Query Frame = 1
Query: 55 TDIDRRCGDTNQTPLMVASVVGSSRVVRDLLRQGASVSVADSDGYTALHHSVHHKNLAVSKDLIEAGADLEARPGGVY--------DTPLHVAATKGFCQGMVVLM------DSRLDDGSTPLFVAASDGRLEAVKILLRASANPLLSAYGSLPLYMAVYNGHLKVVSELVHWYGVDRCTSDGGALALATAASRKHVDIVTFLCDAGV 636
T+IDRRC + T LM A+ G R+VR LLR GA VSV+ DG+TALH ++ +NLAV+K LI+AGA++EA+ V TPLH+AA +GFC+GMV L+ DSR+ DGST +++AA G LEAV+IL + ANPLL + PL +A + GHL VV ELV +G+D C +G AL TAA H I+TFL DAGV
Sbjct: 42 TEIDRRCDEHGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHTALHFAIGGRNLAVTKALIKAGAEVEAKADLVRMESEVVQGQTPLHLAAGEGFCEGMVALINAGANVDSRMSDGSTAMYIAACLGNLEAVEILFQKKANPLLRVGPTHPLDIATHGGHLGVVQELVQRFGIDGCADEGAIGALETAAYENHEAIMTFLLDAGV 249
BLAST of mRNA_Ecto-sp13_S_contig705.18117.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE) HSP 1 Score: 154 bits (390), Expect = 1.070e-41 Identity = 98/185 (52.97%), Postives = 117/185 (63.24%), Query Frame = 1
Query: 103 VASVVGSSRVVRDLLRQGASVSVADSDGYTALHHSVHHKNLAVSKDLIEAGADLEARPG-----GVYDTPLHVAATKGFCQGMVVLMDSRLDDGSTPLFVAASDGRLEAVKILLRASANPLLSAYG--SLPLYMAVYNGHLKVVSELVHWYGVDRCTSDGGALALATAASRKHVDIVTFLCDAGV 636
VAS +G RVVR LLR GA VS AD+DG TALH S+ +K+LAVSK L++AGADLEAR GV TPLHVAA KGF +GMV+L+ + VK + A ANP+L+AY SLPL +A NG L VV EL +G+D C+ DGGA AL AAS+ VDIVTFL D GV
Sbjct: 37 VASTMGYLRVVRVLLRLGARVSAADNDGATALHLSIVNKHLAVSKALVKAGADLEARIDHHQALGVGCTPLHVAAAKGFHKGMVMLIHA-------------------GVKGFVGAKANPILAAYDGESLPLDVAAENGQLGVVRELEQRFGIDGCSCDGGAQALVEAASQNQVDIVTFLFDNGV 202
BLAST of mRNA_Ecto-sp13_S_contig705.18117.1 vs. uniprot
Match: D7FXY7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY7_ECTSI) HSP 1 Score: 103 bits (258), Expect = 5.220e-23 Identity = 63/145 (43.45%), Postives = 86/145 (59.31%), Query Frame = 1
Query: 241 LIEAGADLEARPGGVYDTPLHVAATKGFCQGMVVLMD------SRLDDGSTPLFVAASDGRLEAVKILLRASANPLLSAY------GSLPLYMAVYNGHLKVVSELVHWYGVDRCT-SDGGALALATAASRKHVDIVTFLCDAGV 636
L+EAGA LE TPL +AA G M L++ SR DG+TPLF+AA +G ++AV++LL A +PLL+ + SLPL +A GHL+VV+EL+ G+ C S GG AL AA KH+D++T L +AGV
Sbjct: 2 LVEAGAPLEVATKQQLCTPLQIAAVNGCAASMTTLLEAGANLNSRRFDGATPLFLAAWEGNVDAVRLLLLAKVDPLLTPHLGTSERASLPLDVAAGLGHLEVVNELIRQVGIGGCGGSSGGVRALQQAARNKHLDMLTVLTNAGV 146
BLAST of mRNA_Ecto-sp13_S_contig705.18117.1 vs. uniprot
Match: UPI001DB2D831 (uncharacterized protein n=1 Tax=Fusarium solani TaxID=169388 RepID=UPI001DB2D831) HSP 1 Score: 68.2 bits (165), Expect = 9.940e-10 Identity = 54/156 (34.62%), Postives = 83/156 (53.21%), Query Frame = 1
Query: 85 NQTPLMVASVVGSSRVVRDLLRQGASVSVADSDGYTALHHS-VHHKNLAVSKDLIEAGADLEARP---GGVYDTPLHVAATKGFCQGMVVLMDSRLDD----------------GSTPLFVAASDGRLEAVKILLRASANP-LLSAYGSLPLYMAV 489
++TPL++A G+ + V +L+ G +V+ DG TALH + V+ N ++ + L++ GA + GG+ +P H+AA G M VL+ S LDD G T L VAAS RLE +K+LL A A+P + G+ PL+ A+
Sbjct: 1253 SRTPLILACEKGNLQAVHELIHAGVNVNATMRDGVTALHCAIVYGSNSSLVQALVDKGAKMNTSTKAFGGL--SPFHLAAQGGHDVIMGVLL-SALDDLDPDARSLVIGHCDNEGQTALHVAASFSRLEVIKLLLAAGADPERIDKRGATPLHSAL 1405
BLAST of mRNA_Ecto-sp13_S_contig705.18117.1 vs. uniprot
Match: UPI00145B288C (palmitoyltransferase ZDHHC13 n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=UPI00145B288C) HSP 1 Score: 67.8 bits (164), Expect = 1.160e-9 Identity = 61/202 (30.20%), Postives = 96/202 (47.52%), Query Frame = 1
Query: 61 IDRRCGDTNQTPLMVASVVGSSRVVRDLLRQGASVSVADSDGYTALHHSVHHKNLAVSKDLIEAGADLEARPGGVYDTPLHVAATKGFC----------QGMVVLMDSRLDDGSTPLFVAASDGRLEAVKILLRASAN-PLLSAYGSLPLYMAVYNGHLKVVSELVHWYGVDRCTSDGGALALATAASRKHVDIVTF-LCDA 630
+D+ GD N TPL A G ++V L+R GA S+AD +GY ALH ++ +++A++ L+ G +++ P TPL +AA K V +DS +TPL A G ++A ILL A A+ ++ G PL +A + H ++ +++ +R S L LA H V F +C A
Sbjct: 119 VDQLGGDLNSTPLHWAIRQGHLQMVIQLMRYGADPSIADGEGYRALHLAILFQHMAIAAYLMAKGQEVDT-PDCNGQTPLMLAAQKIIGPEPTHFLVRHDASVTAVDS--SSRNTPLHCAVLAGNVDAAHILLEAGASVDAQNSNGHTPLDLA-HQVHSPLLIHMLNLIKQERAHSSSRCLRLA----HSHKTFVQFVICTA 312 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig705.18117.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig705.18117.1 >prot_Ecto-sp13_S_contig705.18117.1 ID=prot_Ecto-sp13_S_contig705.18117.1|Name=mRNA_Ecto-sp13_S_contig705.18117.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=212bp MPSTLSKSSGSADPTIATTDIDRRCGDTNQTPLMVASVVGSSRVVRDLLRback to top mRNA from alignment at Ecto-sp13_S_contig705:18143..18778+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig705.18117.1 ID=mRNA_Ecto-sp13_S_contig705.18117.1|Name=mRNA_Ecto-sp13_S_contig705.18117.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=636bp|location=Sequence derived from alignment at Ecto-sp13_S_contig705:18143..18778+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig705:18143..18778+ >mRNA_Ecto-sp13_S_contig705.18117.1 ID=mRNA_Ecto-sp13_S_contig705.18117.1|Name=mRNA_Ecto-sp13_S_contig705.18117.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=636bp|location=Sequence derived from alignment at Ecto-sp13_S_contig705:18143..18778+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |