mRNA_Ecto-sp13_S_contig7034.18084.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7034.18084.1 vs. uniprot
Match: D8LLX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX5_ECTSI) HSP 1 Score: 704 bits (1817), Expect = 9.060e-249 Identity = 358/378 (94.71%), Postives = 359/378 (94.97%), Query Frame = 1
Query: 1 SKMQGSAVPHYFTPRVGEYDMWAIKYGYMAVEGEAEELLAEHEASNLSAGLCDLKALASQALAFSTDEDGSGYSGMNPLASVFDLGQEPMDYWEDKLELVTELWPVLLDRSTQQGEAQFQRYGFAAMSLLRQVLMSGLYSTKYIGGFDISKQRRVESDTPGPIQLVPADRQRRALTLVLRVVTGDEPAGGAAFLPGEEDFSNLAAWSGSCAGLGQYCYGVVPVDVLSEVNALRKSVLLQAFSVDHIMRLRLHSWASGAGGVDTLSVSEMFESATNAVWGDEGFGSARAKLWQNWDLMLFWLEVLQASAYGSAGVESVVPGDVAATAVGLVYSLMDTGKNLTSADAAYGLHRAAALKHGVWEERGNTDGVILWQLGGLK 1134
SKMQGSAVPHYFTPRVGEYDMWAIKYGYMAVEGEA+ELLAEHE DLKALASQALAFSTDEDGSGYSGMNPLASVFDLGQEPMDYWEDKLELVTELWPVLLDRSTQQGEAQFQRYG AAMSLLRQVL SGLYSTKYIGGF ISKQRRVESDTPGPIQLVPADRQRRALTLVLRVVTGDEPAGGAAFLPGEEDFSNLA WSGSCAGLGQYCYGVVPVDVLSEVNALRKSVLLQAFSVDHIMRLRLHSWASGAGGVDTLSVSEMFESATNAVWGD GFGSARAKLWQNWDLMLFWLEVLQA YGSAGVESVVPGDV ATAVGLVYSLMDTGKNLTSADAAYGLHRAAALKHG WEERGNTDG ILWQLGGLK
Sbjct: 438 SKMQGSAVPHYFTPRVGEYDMWAIKYGYMAVEGEADELLAEHE---------DLKALASQALAFSTDEDGSGYSGMNPLASVFDLGQEPMDYWEDKLELVTELWPVLLDRSTQQGEAQFQRYGHAAMSLLRQVLASGLYSTKYIGGFHISKQRRVESDTPGPIQLVPADRQRRALTLVLRVVTGDEPAGGAAFLPGEEDFSNLAGWSGSCAGLGQYCYGVVPVDVLSEVNALRKSVLLQAFSVDHIMRLRLHSWASGAGGVDTLSVSEMFESATNAVWGDGGFGSARAKLWQNWDLMLFWLEVLQA--YGSAGVESVVPGDVTATAVGLVYSLMDTGKNLTSADAAYGLHRAAALKHGAWEERGNTDGFILWQLGGLK 804
BLAST of mRNA_Ecto-sp13_S_contig7034.18084.1 vs. uniprot
Match: A0A835ZFA7_9STRA (DUF4953 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFA7_9STRA) HSP 1 Score: 224 bits (572), Expect = 3.390e-66 Identity = 140/372 (37.63%), Postives = 206/372 (55.38%), Query Frame = 1
Query: 28 HYFTPRVGEYDMWAIKYGYMAV-EGEA---EELLAEHEASNLSAGLCDLKALASQALAFSTDEDGSGYSGMNPLASVFDLGQEPMDYWEDKLELVTELWPVLLDRSTQQGEAQFQRYGFAAMSLLRQVLMSGLYSTKYIGGFDISKQRRVESDTPGPIQLVPADRQRRALTLVLRVVTGDEPAGGAA------FLPGEEDFSNLAAWSGSCAGLGQYCYGVVPVDVLSEVNALRKSVLLQAFSVDHIMRLRLHSWASGAGGVDTLSVSEMFESATNAVWGDEGFGSARAKLWQNWDLMLFWLEVLQASAYG--SAGVESVVPGDVAATAVGLVYSLMDTGKNLTSADAAYGLHRAAALKHGVWEERGNTDGV 1107
+YFTP +G YDMWAI+YGYM V + +A + +H DL+ FSTDED S G++P SVFDL +P+ ++ D+L++V E+ P LLDR+ Q GE F RY + LL+ + +SGLY+ KYIGG +SKQRR+ ++T P V A +QR AL L+++++TG E G AA FLP + G C G+ +YC P DVL+++ +R+ +LL S+D + +RL+SW G G ++ E+F + T+A+WG S RA +NW +MLFW ++L A A S+G GD+AA A G Y + + L + A+GL + + WE RG + V
Sbjct: 67 NYFTPVLGSYDMWAIEYGYMDVSQADAVAPATMFDQHP---------DLET-------FSTDEDRSRNDGIDPFVSVFDLSSDPLAFFADRLDVVAEIRPKLLDRAVQLGEP-FTRYSDSEKMLLQLIKVSGLYAAKYIGGMQLSKQRRIATNTQAPATPVSAAQQREALALLVKILTGVEAVGSAANSTSVDFLPEPTALPLMVQTGGVCEGIERYCLATEPYDVLTDLQTVREMILLNVLSLDRLDMVRLNSW--GKQGSSAFTIRELFTTLTDAIWGGGLIASTRAASPENWAIMLFWGDLLMAIAVAIPSSG------GDIAAAAAGEAYRIAASAPALDPSAPAWGLSKEFQRRLSTWE-RGAWENV 412
BLAST of mRNA_Ecto-sp13_S_contig7034.18084.1 vs. uniprot
Match: A0A7S1TU96_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU96_9STRA) HSP 1 Score: 114 bits (286), Expect = 9.380e-25 Identity = 87/252 (34.52%), Postives = 123/252 (48.81%), Query Frame = 1
Query: 34 FTPRVGEYDMWAIKYGYMAVEGEAEELLAEHEASNLSAGLCDLKALASQALAFSTDEDGSGYSGMNPLASVFDLGQEPMDYWEDKLELVTELWPVLLDRSTQQGEAQFQ-RYGFAAMSLLRQVLMSGLYSTKYIGGFDISKQRRVESDTPGPIQLVPADRQRRALTLVLRVVTGDEPAGGAAFLPGEEDFSNLAAWSGSCAG-LGQYCYGVVPVDVLSEVNALRKSVLLQAFSVDHIMRLRLHSWASGAGGV 783
FTPR+GEYD WAI+YGY VE E+ +L S L + L A+A +ALAF TDED SG G SVFDL P Y+ D+L L L +RS GE + GF A +L + Y TK IGG+ + K + S P+ VPA Q +L +L V+ G++ A++ P + + A C + YCYGV PV + + +++L + R R +W+ G G +
Sbjct: 97 FTPRIGEYDKWAIRYGYAPVEDESGDL------SGLVSQHPKLTAIADKALAFGTDEDISGAEGAEYHTSVFDLSANPTAYYLDQLALAERLKTSAKERSVFDGEPGTRIDLGFRAAE--STLLFACKYLTKAIGGYLLDKSAK--SSDYAPVSAVPASVQETSLEAILSVLKGEKYYSTASY-PLDLKAYAIKANVDECPNPVEGYCYGVEPVSAFARRDTRDQTILDYLLDPARLERRRDQAWSDGVGSL 337
BLAST of mRNA_Ecto-sp13_S_contig7034.18084.1 vs. uniprot
Match: A0A2E5FHL5_9BACT (Uncharacterized protein n=2 Tax=bacterium TaxID=1869227 RepID=A0A2E5FHL5_9BACT) HSP 1 Score: 107 bits (266), Expect = 1.800e-21 Identity = 80/274 (29.20%), Postives = 131/274 (47.81%), Query Frame = 1
Query: 28 HYFTPRVGEYDMWAIKYGYMAVEGEAEELLAEHEASNLSAGLCDLKALASQALA----FSTDEDGSGYSGMNPLASVFDLGQEPMDYWEDKLELVTELWPVLLDRSTQQGEAQFQRYGFAAMSLLRQVLMSGLYSTKYIGGFDISKQRRVESDTPGPIQLVPADRQRRALTLVLRVVTGDEPAGGAAFLPGEEDFSNLAAWSGSCAGLGQYCYGV-VPVDVLSEVNALRKSVLLQAFSVDHIMRLRLHSWASGAGGVDTLSVSEMFESATNAVW 834
HY +P G+YD WA++YGY + E + +HE LK LAS F+TD+D + G +P + +DL +P+ ++ED+++L L + DR +GE G +L + G ++ KY+GG D+S+ + + P PI + Q RAL L++ +T D A L DF S GLG + + D+ S V + + L+ F ++R+R +W A G D+LS+S++F + A+W
Sbjct: 540 HYSSPVTGDYDDWAVQYGYKYLPDEISGV--QHEW---------LKELASDNTHPHHHFATDQDSATAFGWDPYTNYWDLS-DPLSFFEDRIKLAKSLISEIEDRVVSEGEEWTDLRG-GVSQILYDMSRGGPFAAKYLGGHDMSRAHKGDPGAPAPISFISYSEQERALDLLIESLTVDT-----AMLV---DFYPYMVNSFRAYGLGGRSFMQDLNTDIHSTVASRKMMTLMYLFDSSRLVRMRDAAWYHEANGGDSLSISDVFAAVHEALW 792
BLAST of mRNA_Ecto-sp13_S_contig7034.18084.1 vs. uniprot
Match: A0A3E0NX28_9BACT (DUF5117 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0NX28_9BACT) HSP 1 Score: 101 bits (251), Expect = 1.570e-19 Identity = 61/177 (34.46%), Postives = 97/177 (54.80%), Query Frame = 1
Query: 31 YFTPRVGEYDMWAIKYGYMAVEGEAEELLAEHEASNLSAGLCDLKALASQALAFSTDEDGSGYSGMNPLASVFDLGQEPMDYWEDKLELVTELWPVLLDRSTQQGEAQFQRYGFAAMSLLRQVLMSGLYSTKYIGGFDISKQRRVESDTPGPIQLVPADRQRRALTLVLRVVTGDEP 561
YF+ +G YDMWAI+YGY + G+ E E E A C LA++TDED G +PL++ +D+G +P+ Y + + +L+ ELWP LL+ ST+ GE +Q+ A LL + + ++Y+GG + + + ++D P P +V +QR AL L+ V D+P
Sbjct: 563 YFSSTIGPYDMWAIEYGYKPLSGDTE---GEVEELRKIAARCG-----DPQLAYATDEDTRGIDP-DPLSNRYDMGSDPIAYAKMRAKLIGELWPTLLEESTEDGEG-YQKARQAFGVLLGNHGRAMYFVSRYVGGMYVHRAHKGDADAPPPFVVVEPAKQREALALLEEQVFSDKP 729
BLAST of mRNA_Ecto-sp13_S_contig7034.18084.1 vs. uniprot
Match: A0A7R9YFV1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFV1_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 4.120e-17 Identity = 70/212 (33.02%), Postives = 97/212 (45.75%), Query Frame = 1
Query: 34 FTPRVGEYDMWAIKYGYMAVEGEAEELLAEHEASNLSAGLCDLKALASQALAFSTDEDGSGYSGMNPLASVFDLGQEPMDYWEDKLELVTELWPVLLDRSTQQGEAQFQRYGFAAMSLLRQVLMSGLYSTKYIGGFDISKQRRVESDT---PGPIQLVPADRQRRALTLVLRVVTGDEPAGGAAFLPGEEDFSNLAAWSGSCAGLGQ-YCYG 657
FTP +GEYDMWAIK+GY E AEH F+TDED +GM+ SVFDL +P+ Y+ED+L+ L R GE R + R +L S Y K IGG+ I K R+ + T P P++ Q RAL+ +L V+ G E + A+ + D + +A C + + YCYG
Sbjct: 671 FTPVIGEYDMWAIKFGYENDSQYQEVFEAEHP--------------------FATDEDEPRSAGMDIETSVFDLSSDPIAYYEDQLKFARLLKADAAQRGVLAGEYH-TRIEALLKKVQRTMLSSCAYMAKAIGGYVIGKTRKAQDQTNGAPTPVRRTEQSTQDRALSNILDVLLGAEDSDQTAYSGSDTDVA-VAVEPNDCPNVVEGYCYG 860
BLAST of mRNA_Ecto-sp13_S_contig7034.18084.1 vs. uniprot
Match: A0A3N9MTD7_9BACT (DUF5117 domain-containing protein n=2 Tax=Bacteria TaxID=2 RepID=A0A3N9MTD7_9BACT) HSP 1 Score: 90.5 bits (223), Expect = 5.850e-16 Identity = 52/177 (29.38%), Postives = 97/177 (54.80%), Query Frame = 1
Query: 10 QGSAVPHYFTPRVGEYDMWAIKYGYMAVEGEAEELLAEHEASNLSAGLCDLKALASQALAFSTDEDGSGYS--GMNPLASVFDLGQEPMDYWEDKLELVTELWPVLLDRSTQQGEAQFQRYGFAAMSLLRQVLMSGLYSTKYIGGFDISKQRRVESDTPGPIQLVPADRQRRALTLV 534
+G +YF +G YD WAI+Y Y ++ +A+ ++E + A + +A L + TDED G S G++P S++DLG +P+ Y++D+L++ ELW + ++ +GE ++Q++ + + ++ ++IGG + + D P ++VPADRQR AL ++
Sbjct: 542 KGQKQGNYFQTTLGPYDYWAIEYAYKPLDPDAK--ISEKQMLEKIA-----QRVADPMLQYGTDEDAYGLSTRGIDPSCSLYDLGNDPLSYYQDRLDISQELWENIPEKFEIEGE-RYQKFRLVFSQGITEYAIAAANIPRFIGGIHFYRDHIGDPDGRPPFRIVPADRQREALKML 710
BLAST of mRNA_Ecto-sp13_S_contig7034.18084.1 vs. uniprot
Match: A0A812QXC6_SYMPI (Hypothetical protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812QXC6_SYMPI) HSP 1 Score: 89.4 bits (220), Expect = 1.430e-15 Identity = 78/303 (25.74%), Postives = 135/303 (44.55%), Query Frame = 1
Query: 13 GSAVPHYFTPRVGEYDMWAIKYGYMAVEGEAEELLAEHEASNLSAGLCDLKALASQALAFSTDEDGSGYSGMNPLASVFDLGQEPMDYWEDKLELVTELWPVLLDRSTQQGEAQFQRYGFAAMSLLRQVLMS-GLYSTKYIGGFDISKQRRVESDTPGPIQLVPADRQRRALTLVLRVVTGDEPAGGAAFLPGEEDFSNLAAWSGSCAGLGQYCYGVVPVDVLSEVNALRKSVLLQAFSVDHIMRLRLHSWASGAGGVDTLSVSEMFESATNAVWGDEGFGSARAKLWQNWDLMLFWLEVLQA 918
G A+ H ++P VGEYD AI+YGY ++ + L L D++ A Q F T D Y G +P +DL +P+ YWE +L+L ++ LL+ S E+ + YG A S++ L G+ + Y+GG + + + T Q +PA+ QRRAL ++LR++ LP + + L S Q + +D+ V LR+ +L + + ++++ G D +VSE+ + V+G G + DL ++++L +
Sbjct: 514 GEALRHIWSPTVGEYDKLAIRYGYTHLQTSESD-------PGLLQILEDVRRRAEQ---FQTCYDDDLYLGEDPSCLDYDLSADPLGYWEQQLDLYADVQRHLLEMSVAPRES-YDNYGRAVHSVVGGFLPDIGINAVYYLGGINNTYLHKYADQTRRSRQPMPAETQRRALAIILRILRPKTEG----LLPPDSNLPYLVDGS-------QLQGAIESLDLTDLVRRLRQLLLEEVLRSERLLQVHKQENLLAPGDADAFTVSELL---STLVYGVMSAGLDKITSEDEQDLQRIFVQILSS 791
BLAST of mRNA_Ecto-sp13_S_contig7034.18084.1 vs. uniprot
Match: A0A812U6K0_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812U6K0_9DINO) HSP 1 Score: 89.4 bits (220), Expect = 1.470e-15 Identity = 73/274 (26.64%), Postives = 122/274 (44.53%), Query Frame = 1
Query: 13 GSAVPHYFTPRVGEYDMWAIKYGYMAVEGEAEELLAEHEASNLSAGLCDLKALASQALAFSTDEDGSGYSGMNPLASVFDLGQEPMDYWEDKLELVTELWPVLLDRSTQQGEAQFQRYGFAAMSLLRQVLMS-GLYSTKYIGGFDISKQRRVESDTPGPIQLVPADRQRRALTLVLRVVTGDEPAGGAAFLPGEEDFSNLAAWSGSCAGLGQYCYGVVPVDVLSEVNALRKSVLLQAFSVDHIMRLRLHSWASGAGGVDTLSVSEMFESATNAV 831
G A+ H ++P +GEYD I+YGY ++ A + L L D++ LA T D Y G +P +DL +P+ YWE +L+L ++ LL+ S E+ + YG A S+L L G+ + Y+GG + + + + Q +PAD QRRAL ++LR++ + LP ++ L + Q + VD+ V LR+ +L +A + ++++ G D VSE + V
Sbjct: 580 GEALTHVWSPTIGEYDKLVIRYGYTHMQSPAND-------PGLEKVLEDVRRLAE---GMQTCYDDDLYLGEDPSCLDYDLSADPLAYWEQQLDLYADVQRNLLEMSVAPRES-YNLYGRAVHSILAGFLPEMGINAVYYLGGINNTYLHKYPDQSRRARQPMPADTQRRALAIILRILRPNSQG----LLPPASNWPYLVNGN-------QLDGAIESVDLTDLVRRLRRLLLEEALRFERLLQVHKQENLLGPTEADAFPVSEFLSTLVYGV 831
BLAST of mRNA_Ecto-sp13_S_contig7034.18084.1 vs. uniprot
Match: A0A7C5YPJ6_9BACT (DUF5117 domain-containing protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C5YPJ6_9BACT) HSP 1 Score: 88.6 bits (218), Expect = 2.770e-15 Identity = 77/280 (27.50%), Postives = 134/280 (47.86%), Query Frame = 1
Query: 28 HYFTPRVGEYDMWAIKYGY-----MAVEGEAEELLAEHEASNLSAGLCDLKALASQALAFSTDEDGSGYSGMNPLASVFDLGQEPMDYWEDKLELVTELWPVLLDRSTQQGEA--QFQRYGFAAMSLLRQVLMSGLYSTKYIGGFDISKQRRVESDTPGPIQLVPADRQRRALTLVLRVVTGDEPAGGAAFLPGEEDFSNLAAWSGSCAGLGQYCYGVVPVD--VLSEVNALRKSVLLQAFSVDHIMRLRLHSWASGAGGVDTLSVSEMFESATNAVWGD 840
+Y+ P +G YD WAI+YGY + + L E N LA+ TDE + +P + FDLG+EP++YWE ++ EL VL R GE+ F RY FA ++ + + + ++YIGG I + + + P + V A++QRRAL L++ + ++ AF + + LA + G G G VP D V ++++++S L + S D + R+ + + + +T +++E+FE+ A+W +
Sbjct: 802 YYWNPTIGPYDYWAIEYGYRIFPNVRTPEDERPYLLEIARRNTE-----------PELAYETDEYADRF---DPYVTRFDLGKEPLEYWELVMQDTHELLRVLPSRVPAAGESYYDFTRYFFATLASFSR---AAVQLSRYIGGLHIRRNFASDPNALPPSEPVSAEKQRRALRLIVDYIFAEK-----AFDLPKGLYLRLAP---NPYGFG----GAVPPDAPVRDFLSSIQRSTLARLMSPDTLRRVANNEFKA-VDPRNTFTMAELFETLQQAIWAE 1051 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7034.18084.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7034.18084.1 >prot_Ecto-sp13_S_contig7034.18084.1 ID=prot_Ecto-sp13_S_contig7034.18084.1|Name=mRNA_Ecto-sp13_S_contig7034.18084.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=377bp MQGSAVPHYFTPRVGEYDMWAIKYGYMAVEGEAEELLAEHEASNLSAGLCback to top mRNA from alignment at Ecto-sp13_S_contig7034:1733..7621- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7034.18084.1 ID=mRNA_Ecto-sp13_S_contig7034.18084.1|Name=mRNA_Ecto-sp13_S_contig7034.18084.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5889bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7034:1733..7621- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7034:1733..7621- >mRNA_Ecto-sp13_S_contig7034.18084.1 ID=mRNA_Ecto-sp13_S_contig7034.18084.1|Name=mRNA_Ecto-sp13_S_contig7034.18084.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1131bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7034:1733..7621- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |