mRNA_Ecto-sp13_S_contig701.18059.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig701.18059.1
Unique NamemRNA_Ecto-sp13_S_contig701.18059.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig701.18059.1 vs. uniprot
Match: D7FYK6_ECTSI (Aminodeoxychorismate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYK6_ECTSI)

HSP 1 Score: 1182 bits (3057), Expect = 0.000e+0
Identity = 595/613 (97.06%), Postives = 600/613 (97.88%), Query Frame = 1
Query:  259 MASSRLNGADVSEDLTQVNGAAAMPPPVAANTARTAQQRGFPATLSLGAPRHRPGTDGYTTKGNVEVSCKVMDVPHAEECVEDLVQALDARRGVLLTSSYEFPGRYARWTLGFSDPPLELSGTGRDFRVRALNDSARCPPPFSQEERSKQPSLFSVVRAAVDLFYYEGDPQLGLYGAFGYDLTFQFDSIPLKHERDGSQKDLLLYLPDKMLVINMNLSFFLGLQDKRDAWSIEYDFAYGGATTEGLPREGEVVAYKPSDKPGDRDTPPGDYAKKVDKAKEEFKVGNLFEVVLSQTFKKPCTSSPAKVFRRLRKRNPSPYGFLINLGDQEYLVGASPEMFVRCERTRHGIRVETCPISGTIERGANPLEDAQKIRSLLSNKKEESELTMCTDVDRNDKSRICEPSSVRVLGRRQIEMYSRLIHTVDHVEGYLRKGFDALDAFLCHTWAVTVTGAPKTWAIRFVEQNEASPRAWYGGAVGLVGFDGHLNTGLTLRTVRVKDGIAEVRAGATLLFDSEPALEEAETELKASAMIDAVTRGDPRPGATGSEEAFKTSISTGVGKSVLLVDHEDSFVHTLGNYLRQTGAEVSTVRSGDPLVAYLRGVRNGKQPYPDLV 2097
            MASSRLNGADVSEDLTQVNGAAAMPPPVAANTARTAQQRGFPATLSLGAPRHRPGTDGYTTKGNVEVSCKVMDVPHAEECVEDLV ALD+RRGVLLTSSYEFPGRYARWTLGFSDPPLELSGTGRDFRVRALNDSARC  PFSQEERSKQPSLFSVVRAAVDLFYYEGDPQLGLYGAFGYDLTFQFDSIPLKHERDGSQKDLLLYLPDKMLV++         QDKRDAWSIEYDFAYGGATTEGLPREGEVVAYKPSDKPGDRDTPPGDYAKKVDKAK+EFKVGNLFEVVLSQTFKKPCTSSPAKVFRRLRKRNPSPYGFLINLGDQEYLVGASPEMFVRCERTRHGIRVETCPISGTIERGANPLEDAQKIRSLLSNKKEESELTMCTDVDRNDKSRICEPSSVRVLGRRQIEMYSRLIHTVDHVEGYLRKGFDALDAFLCHTWAVTVTGAPKTWAIRFVEQNEASPRAWYGGAVGLVGFDGHLNTGLTLRTVRVKDGIAEVRAGATLLFDSEPALEEAETELKASAMIDAVTRGDP+PGATGSEEAFKTSISTGVGKSVLLVDHEDSFVHTLGNYLRQTGAEVSTVRSGDPLVAYLRGVR GKQPYPDLV
Sbjct:    1 MASSRLNGADVSEDLTQVNGAAAMPPPVAANTARTAQQRGFPATLSLGAPRHRPGTDGYTTKGNVEVSCKVMDVPHAEECVEDLVHALDSRRGVLLTSSYEFPGRYARWTLGFSDPPLELSGTGRDFRVRALNDSARCLSPFSQEERSKQPSLFSVVRAAVDLFYYEGDPQLGLYGAFGYDLTFQFDSIPLKHERDGSQKDLLLYLPDKMLVVD---------QDKRDAWSIEYDFAYGGATTEGLPREGEVVAYKPSDKPGDRDTPPGDYAKKVDKAKQEFKVGNLFEVVLSQTFKKPCTSSPAKVFRRLRKRNPSPYGFLINLGDQEYLVGASPEMFVRCERTRHGIRVETCPISGTIERGANPLEDAQKIRSLLSNKKEESELTMCTDVDRNDKSRICEPSSVRVLGRRQIEMYSRLIHTVDHVEGYLRKGFDALDAFLCHTWAVTVTGAPKTWAIRFVEQNEASPRAWYGGAVGLVGFDGHLNTGLTLRTVRVKDGIAEVRAGATLLFDSEPALEEAETELKASAMIDAVTRGDPQPGATGSEEAFKTSISTGVGKSVLLVDHEDSFVHTLGNYLRQTGAEVSTVRSGDPLVAYLRGVRKGKQPYPDLV 604          
BLAST of mRNA_Ecto-sp13_S_contig701.18059.1 vs. uniprot
Match: A0A835Z6A5_9STRA (Aminodeoxychorismate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6A5_9STRA)

HSP 1 Score: 814 bits (2103), Expect = 1.100e-287
Identity = 412/586 (70.31%), Postives = 474/586 (80.89%), Query Frame = 1
Query:  373 RGFPATLSLGAPRHRPGTDGYTTKGNVEVSCKVMDVPHAEECVEDLVQALDARRGVLLTSSYEFPGRYARWTLGFSDPPLELSGTGRDFRVRALNDSARCPPPF------------SQEERSKQPSLFSVVRAAVDLFYYEGDPQLGLYGAFGYDLTFQFDSIPLKHERDGSQKDLLLYLPDKMLVINMNLSFFLGLQDKRDAWSIEYDFAYGGATTEGLPREGEVVAYKPSDKPGDRDTPPGDYAKKVDKAKEEFKVGNLFEVVLSQTFKKPCTSSPAKVFRRLRKRNPSPYGFLINLGDQEYLVGASPEMFVRCERTRHGIRVETCPISGTIERGANPLEDAQKIRSLLSNKKEESELTMCTDVDRNDKSRICEPSSVRVLGRRQIEMYSRLIHTVDHVEGYLRKGFDALDAFLCHTWAVTVTGAPKTWAIRFVEQNEASPRAWYGGAVGLVGFDGHLNTGLTLRTVRVKDGIAEVRAGATLLFDSEPALEEAETELKASAMIDAVTRGDPRPGATGSEEAFKTSISTGVGKSVLLVDHEDSFVHTLGNYLRQTGAEVSTVRSGDPLVAYLRGVRNGKQPYPDL 2094
            +GFPA LSLGAPRHRP  D YTT G VEV+C+V +V  A E VE L+ ALD +RGVLLTSSYEFPGRYARWTLGF +PP+E++GTG  F VRALN+  R   P               EERS+QPSLFSVVR+ V LF +E DPQLGLYGAFGYDLTFQF+ I     RD  Q+D++LYLPDK+LV++         QDKRDAW+I YDFAYGG +T GLPR G    Y  + +  +RDTP G+YAKKV+ A+EEF++GNLFE VLSQTF  PCT +P+++FRRLR+RNPSPYGFLINLG QEYLVGASPEMFVRCERTR G+RVETCPISGTI RGAN LEDA  +R+LL++ KEESELTMCTDVDRNDKSRICEP SVRVLGRRQIEMYS+LIHTVDHVEGYLR GFDALDAFLCHTWAVTVTGAPKTWAI+F+E++EAS RAWYGGAVG+VGFDGHLNTGLTLRTVRV  G+A+VRAGATLL+DS+PA EEAETELKASAMIDA+TR DP PG++GS EAF   IS G GK +LL+DH+DSFVHTLGNYLRQTGAEV+TVR+G P       +R+G +  P L
Sbjct:   15 KGFPAGLSLGAPRHRPAQDSYTTGGGVEVTCEVGEVFDATERVEALISALDDQRGVLLTSSYEFPGRYARWTLGFVNPPIEVAGTGDRFTVRALNERGRALLPAFWDALSAQQGAGGSEERSRQPSLFSVVRSIVSLFSFEDDPQLGLYGAFGYDLTFQFEPIEQVLPRDADQRDIVLYLPDKLLVVD---------QDKRDAWTISYDFAYGGVSTAGLPRGGAREPYVAAAEAPERDTPQGEYAKKVEVAREEFRLGNLFETVLSQTFTAPCTPAPSELFRRLRRRNPSPYGFLINLGAQEYLVGASPEMFVRCERTRRGLRVETCPISGTIARGANALEDAAAVRALLASPKEESELTMCTDVDRNDKSRICEPGSVRVLGRRQIEMYSKLIHTVDHVEGYLRPGFDALDAFLCHTWAVTVTGAPKTWAIQFIERHEASARAWYGGAVGVVGFDGHLNTGLTLRTVRVLRGVAQVRAGATLLYDSDPAAEEAETELKASAMIDAITREDPPPGSSGSAEAFAEQISVGKGKRILLIDHQDSFVHTLGNYLRQTGAEVTTVRAGGPAREAFDQIRSGTRARPHL 591          
BLAST of mRNA_Ecto-sp13_S_contig701.18059.1 vs. uniprot
Match: W7TEM3_9STRA (Aminodeoxychorismate synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEM3_9STRA)

HSP 1 Score: 711 bits (1836), Expect = 2.340e-245
Identity = 376/616 (61.04%), Postives = 453/616 (73.54%), Query Frame = 1
Query:  391 LSLGAPRHRPGTDGYTTKGNVEVSCKVMDVPHAEECVEDLVQALDARRGVLLTSSYEFPGRYARWTLGFSDPPLELSGTGRDFRVRALN-----------DSARCPPP--------------------------------FSQEERSKQPSLFSVVRAAVDLFYYEGDPQLGLYGAFGYDLTFQFDSIPLKHERDGSQKDLLLYLPDKMLVINMNLSFFLGLQDKRDAWSIEYDFAYGGATTEGLPREGEVVAYKPSDKPG---DRDTPPGDYAKKVDKAKEEFKVGNLFEVVLSQTFKKPCTSSPAKVFRRLRKRNPSPYGFLINLGDQEYLVGASPEMFVRCERTRHGIRVETCPISGTIERGANPLEDAQKIRSLLSNKKEESELTMCTDVDRNDKSRICEPSSVRVLGRRQIEMYSRLIHTVDHVEGYLRKGFDALDAFLCHTWAVTVTGAPKTWAIRFVEQNEASPRAWYGGAVGLVGFDGHLNTGLTLRTVRVKDGIAEVRAGATLLFDSEPALEEAETELKASAMIDAVT-RGDPRPGATGSEEAFKTSISTGVGKSVLLVDHEDSFVHTLGNYLRQTGAEVSTVRSGDPLVAYLRGVRNGKQPYPDLV 2097
            LSLGAPR+RP +  + TKG V+V+C+V DV    + V+ L++ LD+  GVLL SSYEFPGRYARWT+GF DPPL++   G +F+V+ALN           D+   P                                  F +EERS+QPS+FSV+R  VD F  +GDPQLGLYG FGYDLTFQF+ I L+  R  +Q+D++LYLPD++LV++         QDKR AW +EYDF++ G +T+GL R G V+ Y+ +       DRD+P G+YA++V  AK++FKVGNLFEVVLSQTF K C S+P++VF RLR  NPSPYGFLINLGD EYL+GASPEMFVRCE+T+ G+RVETCPISGTI RG++ LEDA +I+++L+N KEESELTMCTDVDRNDKSRICEP SVRVLGRRQIEMYSRLIHTVDHVEGYLR+GFDALDAFLCHTWAVTVTGAPKTWAI+F+E  EASPRAWYGGAVGLV FDG LNTGLTLRT+R+ +GIAEVRAGATLL+DS+P  EEAETELKASA+IDA+        G TG E A     +    + VLLVDH+DSFVHTL NYLRQTGA+VSTVRSG      LR +RN K   PDL+
Sbjct:  116 LSLGAPRYRPLSGRFITKGGVQVTCQVEDVSDTGKEVDALLEGLDSHEGVLLASSYEFPGRYARWTIGFIDPPLKIESRGLNFKVKALNARGEVLLEVIQDALERPDSSLALASLERTGHPAGEDGGTVLSGQVPKSDEYFPEEERSRQPSIFSVIRTLVDFFQSDGDPQLGLYGTFGYDLTFQFEPIKLRMPRSDNQRDVVLYLPDRVLVVD---------QDKRAAWRVEYDFSWNGRSTQGLARTGRVLEYRAAPAEALKRDRDSPVGEYARRVAMAKDQFKVGNLFEVVLSQTFFKECPSAPSRVFSRLRTTNPSPYGFLINLGDGEYLIGASPEMFVRCEQTKAGLRVETCPISGTIARGSDALEDAARIKAILTNPKEESELTMCTDVDRNDKSRICEPGSVRVLGRRQIEMYSRLIHTVDHVEGYLRRGFDALDAFLCHTWAVTVTGAPKTWAIQFIEDQEASPRAWYGGAVGLVAFDGSLNTGLTLRTIRLLNGIAEVRAGATLLYDSDPPAEEAETELKASALIDALACESSETAGVTGEEAAQAADEA----RRVLLVDHQDSFVHTLANYLRQTGADVSTVRSGPNA---LRLIRNTK---PDLL 712          
BLAST of mRNA_Ecto-sp13_S_contig701.18059.1 vs. uniprot
Match: A0A7R9ZU98_9STRA (Aminodeoxychorismate synthase n=1 Tax=Pseudo-nitzschia arenysensis TaxID=697910 RepID=A0A7R9ZU98_9STRA)

HSP 1 Score: 704 bits (1817), Expect = 8.410e-243
Identity = 383/644 (59.47%), Postives = 450/644 (69.88%), Query Frame = 1
Query:  361 TAQQRGFPATLSLGAPRHRPGTDGYTTKGNVEVSCKVMDVPH--------------AEECVEDLVQALDARRGVLLTSSYEFPGRYARWTLGFSDPPLELSGTGRDFRVRALNDSARC---------------------------------------PPP---FSQEERSKQPSLFSVVRAAVDLF-YYEGDPQLGLYGAFGYDLTFQFDSIPLKHERDGSQKDLLLYLPDKMLVINMNLSFFLGLQDKRDAWSIEYDFAYGGATTEGLPREGEVVAYKPSDKPG----DRDTPPGDYAKKVDKAKEEFKVGNLFEVVLSQTFKKPCT--SSPAKVFRRLRKRNPSPYGFLINLGDQEYLVGASPEMFVRCERTRHG------IRVETCPISGTIERGANPLEDAQKIRSLLSNKKEESELTMCTDVDRNDKSRICEPSSVRVLGRRQIEMYSRLIHTVDHVEGYLRKGFDALDAFLCHTWAVTVTGAPKTWAIRFVEQNEASPRAWYGGAVGLVGFDGHLNTGLTLRTVRVKDGIAEVRAGATLLFDSEPALEEAETELKASAMIDAVTRGDPRPGATGSEEAFKTSISTGVGKSVLLVDHEDSFVHTLGNYLRQTGAEVSTVRSGDPLVAYLRG-VRNGKQP 2082
            TA Q+     LSLGAPR RP    + TKG V+V+  V  + +              +E  +E LVQ LD+ +GVLLTSSYEFPGRYARW+LGF DPPLE+SG      ++ALND  +                                        PPP   FS+EERS+QPSLFSVVR+ VDLF Y +GD QLGLYGAFGYDLTF F+ I LK +RD  Q+DLLLYLPD + VI+          DKRDAW I+Y+F   G +T+GLPR G    +KP D+      +RDTP GD+AK VD+AKEEFK+GNLFE VLSQTF++     ++P+ +FRRLR+RNP+PYGF INLG+QEYLVGASPEMFVRCE  +        +RVETCPISGT+ RGA+ LEDA +++SL+ N+KEESELTMCTDVDRNDKSRICEP SV+V+GRRQIEMYSRLIHTVDHVEGYLR  FDALDAFLCHTWAVTVTGAPKTWAI+FVE  E +PR WYGGAVGLVGFDG LNTGLTLRTVR+KDGIAE+RAGATLL DS+P  EE ETELKASAMIDAV R     GA GS          G GK+++L+DHEDSFVHTLGNYLRQTGA V T+RSG   +A +   V  G +P
Sbjct:   62 TASQQAVDRDLSLGAPRGRPEGGHFMTKGGVQVTANVEGLDYVRTGDEASLANERSSEAVIESLVQKLDSHKGVLLTSSYEFPGRYARWSLGFVDPPLEVSGKADKCTIKALNDRGKVLMPAIQRAMEQMKEEAILSDISVTAEDEGMVQIDVTIVPPPPVGTFSEEERSRQPSLFSVVRSLVDLFGYQDGDGQLGLYGAFGYDLTFSFEPIDLKQDRDPEQRDLLLYLPDSVYVID---------SDKRDAWHIQYEFNADGKSTQGLPRVGLEEDFKPYDEATTEFIERDTPEGDFAKSVDRAKEEFKIGNLFEAVLSQTFRETLAPENAPSTIFRRLRQRNPAPYGFFINLGEQEYLVGASPEMFVRCESIQENDYRPGAMRVETCPISGTVARGADALEDALRVKSLVMNQKEESELTMCTDVDRNDKSRICEPGSVQVIGRRQIEMYSRLIHTVDHVEGYLRPEFDALDAFLCHTWAVTVTGAPKTWAIQFVEDMEQTPRCWYGGAVGLVGFDGSLNTGLTLRTVRIKDGIAEIRAGATLLTDSDPPAEELETELKASAMIDAVVREGSGDGANGSVAPKNAPEMVGTGKTIILIDHEDSFVHTLGNYLRQTGAVVKTLRSGPSALATIESMVEAGNKP 696          
BLAST of mRNA_Ecto-sp13_S_contig701.18059.1 vs. uniprot
Match: A0A7S2HFX2_9STRA (Aminodeoxychorismate synthase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HFX2_9STRA)

HSP 1 Score: 694 bits (1790), Expect = 5.760e-239
Identity = 370/619 (59.77%), Postives = 437/619 (70.60%), Query Frame = 1
Query:  391 LSLGAPRHRPGTDGYTTKGNVEVSCKVMDVPHAEECVEDLVQALDARRGVLLTSSYEFPGRYARWTLGFSDPPLELSGTGRDFRVRALND-----------SARCPPP-----------------------------FSQEERSKQPSLFSVVRAAVDLFYYEGDPQLGLYGAFGYDLTFQFDSIPLKHERDGSQKDLLLYLPDKMLVINMNLSFFLGLQDKRDAWSIEYDFAYGGATTEGLPREGEVVAYKPS--DKPGDRDTPPGDYAKKVDKAKEEFKVGNLFEVVLSQTFKKPCTSSPAKVFRRLRKRNPSPYGFLINLGDQEYLVGASPEMFVRCERTRHGIRVETCPISGTIERGANPLEDAQKIRSLLSNKKEESELTMCTDVDRNDKSRICEPSSVRVLGRRQIEMYSRLIHTVDHVEGYLRKGFDALDAFLCHTWAVTVTGAPKTWAIRFVEQNEASPRAWYGGAVGLVGFDGHLNTGLTLRTVRVKDGIAEVRAGATLLFDSEPALEEAETELKASAMIDAVTRGDPRPGAT-------GSEEAFKTSISTGVGKSVLLVDHEDSFVHTLGNYLRQTGAEVSTVRSGDPLVAYLRGVRNG-KQPYPDLV 2097
            L+LGAPR RP +  Y TKG+V VS  V D+ +  E +E L+  LD +RG L TSSYEFPGRYARWTLGF +PP+E+SGTGRDF+V+ALN+           S +  P                              F +EERSKQPSLFSVVR   DLF +  D QLGLYG+FGYDL FQF+ + L  ER   Q+DLLLYLPD+++V++         Q +  AW + YDF + GA+T+  PR G    + P+  ++   RD PPG+++ KV  AKEEF+VGNLFE VLSQTF +P T+ P+ +FRRLR RNP+PYGF INLG+QEYLVGASPEMFVRCE T  G+RVETCPISGTI RG   LEDA +I+ +L+N KEESELTMCTDVDRNDKSRICEP SVRVLGRRQIEMYS+LIHTVDHVEGYLR+GFDALDAFLCHTWAVTVTGAPK WA++FVE++EASPR WYGGAVGLVGFDGHLNTGLTLRT+ ++DG A VRAGATLLFDS+P  EE ETELKASAM+DAV R D    A        GS        ++     V+L+DHEDSFVHTL NYLRQTGAEV T RSG+P    +     G K   PDLV
Sbjct:   72 LTLGAPRDRPRSRKYMTKGSVGVSVAVNDLENPRETIEKLIDTLDMKRGALFTSSYEFPGRYARWTLGFINPPIEISGTGRDFKVKALNERGKVLLLAIETSLKAHPHVATLEMGEGEEASNVLQQLQGSIHTPVGYFPEEERSKQPSLFSVVRCIKDLFSHPDDAQLGLYGSFGYDLAFQFEPMHLTQERREDQQDLLLYLPDQIVVVD---------QQRMSAWELRYDFEWAGASTDWEPRVGSHEPFTPALGNQGRKRDMPPGEFSSKVKLAKEEFRVGNLFEAVLSQTFTEPATAPPSALFRRLRTRNPAPYGFFINLGNQEYLVGASPEMFVRCESTDGGMRVETCPISGTIGRGNTALEDAARIKEILANPKEESELTMCTDVDRNDKSRICEPGSVRVLGRRQIEMYSKLIHTVDHVEGYLREGFDALDAFLCHTWAVTVTGAPKAWAMQFVEKHEASPRQWYGGAVGLVGFDGHLNTGLTLRTIHIQDGQANVRAGATLLFDSDPDSEERETELKASAMLDAVVRADVIDNAEVDNADVDGSGTVSDEDDASRTTLKVVLIDHEDSFVHTLANYLRQTGAEVLTTRSGEPARQLMDSFEAGDKSARPDLV 681          
BLAST of mRNA_Ecto-sp13_S_contig701.18059.1 vs. uniprot
Match: B7FRL0_PHATC (Aminodeoxychorismate synthase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FRL0_PHATC)

HSP 1 Score: 698 bits (1801), Expect = 6.610e-239
Identity = 390/642 (60.75%), Postives = 447/642 (69.63%), Query Frame = 1
Query:  361 TAQQRGFPATLSLGAPRHRPGTDGYTTKGNVEVSCKV--------MDVPHAEECVEDLVQALDARRGVLLTSSYEFPGRYARWTLGFSDPPLELSGTGRDFRVRALNDSARC--------------------------------------PPP----FSQEERSKQPSLFSVVRAAVDLFYYE-GDPQLGLYGAFGYDLTFQFDSIPLKHERDGSQKDLLLYLPDKMLVINMNLSFFLGLQDKRDAWSIEYDFAYGGATTEGLPREGE---VVAYKPSDKPGDRDTPPGDYAKKVDKAKEEFKVGNLFEVVLSQTFKKPCT--SSPAKVFRRLRKRNPSPYGFLINLGDQEYLVGASPEMFVRCERTRHG------IRVETCPISGTIERGANPLEDAQKIRSLLSNKKEESELTMCTDVDRNDKSRICEPSSVRVLGRRQIEMYSRLIHTVDHVEGYLRKGFDALDAFLCHTWAVTVTGAPKTWAIRFVEQNEASPRAWYGGAVGLVGFDGHLNTGLTLRTVRVKDGIAEVRAGATLLFDSEPALEEAETELKASAMIDAVTRGDPRPGATGSEEAFKTSISTGVGKSVLLVDHEDSFVHTLGNYLRQTGAEVSTVRSGDPLVAYLRG-VRNGKQPYPDLV 2097
            TA Q+     L+LGAP  RP    + TKG V+V+  V        +    + + +EDLV  LD+++GVLLTSSYEFPGRYARW+LGF DPPLE+SG G+   + ALN   R                                       PP     F++EERS+QPSLFSVVRA VDLF Y+ GD QLGLYGAFGYDLTFQF+ I L  ERD  Q+DLLLYLPD MLV++         QDKRDAW + YDF     +T+G+PR G      AY  S    +RDTPP ++A  V KAKEEFKVGNLFE VLSQTF++  T    P+ +FRRLR RNP+PYGFLINLG+QEYLVGASPEMFVRCE T         IRVETCPISGT+ RGA+ LEDAQ+++SL+ N KEESELTMCTDVDRNDKSRICEP SV+V+GRRQIEMYSRLIHTVDHVEGYLR  FDALDAFLCHTWAVTVTGAPKTWAI+FVE NE SPR WYGGAVG+VGFDG LNTGLTLRTVRVK+GIAEVRAGATLLFDSEP  EE ETELKASAMIDA+ R  P      S    K       G S++L+DHEDSFVHTLGNYLRQTGA+V+T+RSG   +  L   + N KQP  DLV
Sbjct:   69 TAGQQAAEQGLTLGAPPVRPQGGHFLTKGGVQVTAHVSRLEFSPQLQAGTSAQAIEDLVTQLDSQKGVLLTSSYEFPGRYARWSLGFVDPPLEISGRGQACTITALNARGRVLMPAIEAAMKTLREQEILEQVKIVKEHEETTRVEVQVVPPSEVGTFNEEERSRQPSLFSVVRALVDLFSYQAGDRQLGLYGAFGYDLTFQFEPIDLAQERDSEQRDLLLYLPDTMLVVD---------QDKRDAWRVCYDFNVDQKSTQGIPRTGTPQPFQAYATSTDFVERDTPPSEFANSVLKAKEEFKVGNLFEAVLSQTFREKLTVEQPPSTLFRRLRARNPAPYGFLINLGEQEYLVGASPEMFVRCEATNDNDYRPGAIRVETCPISGTVARGADALEDAQRVKSLMMNAKEESELTMCTDVDRNDKSRICEPGSVQVIGRRQIEMYSRLIHTVDHVEGYLRPEFDALDAFLCHTWAVTVTGAPKTWAIQFVEDNERSPRCWYGGAVGMVGFDGGLNTGLTLRTVRVKNGIAEVRAGATLLFDSEPEAEEKETELKASAMIDAIVRAGPEDSIETSILLKKKPKKMYQGMSLVLIDHEDSFVHTLGNYLRQTGAQVTTLRSGPSAIKTLEAMIANEKQP--DLV 699          
BLAST of mRNA_Ecto-sp13_S_contig701.18059.1 vs. uniprot
Match: A0A1E7FRX3_9STRA (Aminodeoxychorismate synthase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FRX3_9STRA)

HSP 1 Score: 691 bits (1783), Expect = 4.140e-238
Identity = 378/641 (58.97%), Postives = 449/641 (70.05%), Query Frame = 1
Query:  361 TAQQRGFPATLSLGAPRHRPGTDGYTTKGNVEVSCKV--------------MDVPHAEECVEDLVQALDARRGVLLTSSYEFPGRYARWTLGFSDPPLELSGTGRDFRVRALNDSARC----------------------------------PPP---FSQEERSKQPSLFSVVRAAVDLF-YYEGDPQLGLYGAFGYDLTFQFDSIPLKHERDGSQKDLLLYLPDKMLVINMNLSFFLGLQDKRDAWSIEYDFAYGGATTEGLPREGEVVAYKPSDKPGD----RDTPPGDYAKKVDKAKEEFKVGNLFEVVLSQTFKKPCT--SSPAKVFRRLRKRNPSPYGFLINLGDQEYLVGASPEMFVRCERTRHG------IRVETCPISGTIERGANPLEDAQKIRSLLSNKKEESELTMCTDVDRNDKSRICEPSSVRVLGRRQIEMYSRLIHTVDHVEGYLRKGFDALDAFLCHTWAVTVTGAPKTWAIRFVEQNEASPRAWYGGAVGLVGFDGHLNTGLTLRTVRVKDGIAEVRAGATLLFDSEPALEEAETELKASAMIDAVTRGDPRP--GATGSEEAFKTSISTGVGKSVLLVDHEDSFVHTLGNYLRQTGAEVSTVRSGDPLVAYLRG-VRNGKQP 2082
            TA Q+     LSLGAP  RP    Y TKG ++V+  V               +   +E  +E LV+ LD+ +GVLLTSSYEFPGRYARW+LGF DPPLE+SG      ++ALND  +                                   PPP   FS+EERS+QPSLFSVVR+ V+LF Y +GD QLGLYGAFGYDLTF F+ I +K ERD  Q+DLLLYLPD + VI+          DKRDAW ++Y+F     +T+GLPR G    ++  D+       RDTP G++A+ V KAKEEFKVGNLFE VLSQTF++  T  ++P+ +FRRLRKRNP+PYGF INLG+QEYLVGASPEMFVRCE           +RVETCPISGT+ RGA+ LEDA +++SL+ N+KEESELTMCTDVDRNDKSRICEP SV+V+GRRQIEMYSRLIHTVDHVEGYLR  FDALDAFLCHTWAVTVTGAPKTWAI+FVE  E SPR WYGGAVGLVGFDG LNTGLTLRTVR+KDGIAE+RAGATLL DS+P  EE ETELKASAMIDAV R + +   G+T + E  K     G+GK+++L+DHEDSFVHTLGNYLRQTGA V T+RSG   +A +   V  G +P
Sbjct:   34 TAGQQAVTQQLSLGAPGVRPKGGHYLTKGGIQVTANVDRLDFTRTGDEASLANKKSSEAVIESLVERLDSHKGVLLTSSYEFPGRYARWSLGFVDPPLEVSGRANKCTIKALNDRGKVLLPAIERAMKEMKQQNELSEVNVGDEQIDVTVVPPPPVGTFSEEERSRQPSLFSVVRSLVNLFGYQDGDGQLGLYGAFGYDLTFSFEPIDMKQERDPEQRDLLLYLPDSVYVID---------SDKRDAWHVQYEFCVDQKSTQGLPRVGLDDKFQSFDENKSEFIKRDTPEGEFAESVYKAKEEFKVGNLFEAVLSQTFREKLTPENAPSTIFRRLRKRNPAPYGFFINLGEQEYLVGASPEMFVRCETIAENDDHPGAMRVETCPISGTVARGADALEDALRVKSLMMNQKEESELTMCTDVDRNDKSRICEPGSVQVIGRRQIEMYSRLIHTVDHVEGYLRPEFDALDAFLCHTWAVTVTGAPKTWAIQFVEDMENSPRCWYGGAVGLVGFDGSLNTGLTLRTVRIKDGIAEIRAGATLLTDSDPPAEELETELKASAMIDAVVRDEAKVNGGSTKNNEIQKVPEKVGLGKTIILIDHEDSFVHTLGNYLRQTGAIVKTLRSGPSCLAAIENMVEQGNKP 665          
BLAST of mRNA_Ecto-sp13_S_contig701.18059.1 vs. uniprot
Match: A0A448Z2I7_9STRA (Aminodeoxychorismate synthase n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448Z2I7_9STRA)

HSP 1 Score: 691 bits (1782), Expect = 3.210e-237
Identity = 394/698 (56.45%), Postives = 461/698 (66.05%), Query Frame = 1
Query:  208 TRNHGEQXXXXXXXRLTMASSRLNGADVSEDLTQVNGAAAMPPPVAANTARTAQQRGFPATLSLGAPRHRPGTDGYTTKGNVEVSCKV-------------MDVPHAEECV-EDLVQALDARRGVLLTSSYEFPGRYARWTLGFSDPPLELSGTGRDFRVRALNDSARC-----------------------------------------PPP---FSQEERSKQPSLFSVVRAAVDLFYYEG-DPQLGLYGAFGYDLTFQFDSIPLKHERDGSQKDLLLYLPDKMLVINMNLSFFLGLQDKRDAWSIEYDFAYGGATTEGLPREGEVVAYKPSDKPGD----RDTPPGDYAKKVDKAKEEFKVGNLFEVVLSQTFKKPCT--SSPAKVFRRLRKRNPSPYGFLINLGDQEYLVGASPEMFVRCERTRHG------IRVETCPISGTIERGANPLEDAQKIRSLLSNKKEESELTMCTDVDRNDKSRICEPSSVRVLGRRQIEMYSRLIHTVDHVEGYLRKGFDALDAFLCHTWAVTVTGAPKTWAIRFVEQNEASPRAWYGGAVGLVGFDGHLNTGLTLRTVRVKDGIAEVRAGATLLFDSEPALEEAETELKASAMIDAVTR-GDPRPGATGSEEAFKTSISTGVGKSVLLVDHEDSFVHTLGNYLRQTGAEVSTVRSGDPLVAYLRG-VRNGKQP 2082
            T N  E         L M+SS  +  D S  +   NG           T  TA Q+     LSLGAPR RP    Y TKG ++V+  V             +  P++ E V E LVQ LD+ +GVLLTSSYEFPGRYARW+LGF DPPLE+SG G    ++ALND  +                                          PPP   FS+EERS+QPSLFSVVR  VDLF Y+G D QLGLYG FGYDLTF F+ I LK ERD  Q+DL+L+LPD + VI+          DKRDAW ++Y+F     +T+GLPR G    ++P D+       RDT  G ++K V++AKEEFKVGNLFE VLSQTF++  T  + P+ +FRRLRKRNP+PYGF INLG+QEYLVGASPEMFVRCE  +        +RVETCPISGT+ RGA+ LEDA +++SL+ N+KEESELTMCTDVDRNDKSRICEP SV+V+GRRQIEMYSRLIHTVDHVEGYLR  FDALDAFLCHTWAVTVTGAPKTWAI+FVE  E SPR WYGGAVGLVGFDG LNTGLTLRTVR+KDGIAE+RAGATLL DS P  EE ETELKASAMIDAV R G     A    E  K   + G GKS++L+DHEDSFVHTLGNYLRQTGA V T+RSG   +A +   V  G +P
Sbjct:   31 TTNAAESLSPFARTVLEMSSSVDSDTDASATVPNFNGVEVAKTGGRGTT--TAAQKAVAQDLSLGAPRGRPTGGHYMTKGGIQVTASVEGLDYTRTGDKASLSNPNSSEAVIESLVQRLDSHKGVLLTSSYEFPGRYARWSLGFVDPPLEVSGKGDKCTIKALNDRGKVLLPAIEKAMQEMKQEDILSNVDVIVEEAESNMVQIDVTIVPPPPVGTFSEEERSRQPSLFSVVRKLVDLFGYQGGDGQLGLYGGFGYDLTFSFEPIDLKQERDPEQRDLVLFLPDSVYVID---------SDKRDAWHVQYEFNVDNKSTQGLPRVGLSDEFQPFDEEKTEFVKRDTEEGAFSKSVERAKEEFKVGNLFEAVLSQTFREKLTPENKPSTIFRRLRKRNPAPYGFFINLGEQEYLVGASPEMFVRCESIQENDYAPGAMRVETCPISGTVARGADALEDALRVKSLMMNQKEESELTMCTDVDRNDKSRICEPGSVQVIGRRQIEMYSRLIHTVDHVEGYLRPEFDALDAFLCHTWAVTVTGAPKTWAIQFVEDMENSPRCWYGGAVGLVGFDGSLNTGLTLRTVRIKDGIAEIRAGATLLTDSTPLDEELETELKASAMIDAVVRTGSDSSDAASDAETPKPPENVGEGKSIILIDHEDSFVHTLGNYLRQTGATVKTLRSGPSALAAIENMVEQGXKP 717          
BLAST of mRNA_Ecto-sp13_S_contig701.18059.1 vs. uniprot
Match: A0A7S1YQY3_9STRA (Aminodeoxychorismate synthase n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YQY3_9STRA)

HSP 1 Score: 690 bits (1781), Expect = 5.310e-236
Identity = 379/640 (59.22%), Postives = 448/640 (70.00%), Query Frame = 1
Query:  391 LSLGAPRHRPGTDGYTTKGNVEVSCKV-----------MDVPHAE-ECVEDLVQALDARRGVLLTSSYEFPGRYARWTLGFSDPPLELSGTGRDFRVRALNDSARC------------------------------------------PPP----FSQEERSKQPSLFSVVRAAVDLFYYEG-DPQLGLYGAFGYDLTFQFDSIPLKHERDGSQKDLLLYLPDKMLVINMNLSFFLGLQDKRDAWSIEYDFAYGGATTEGLPREGEVVAYKPSDKP--------GDRDTPPGDYAKKVDKAKEEFKVGNLFEVVLSQTFKKPCTSS--PAKVFRRLRKRNPSPYGFLINLGDQEYLVGASPEMFVRCERTRHG------IRVETCPISGTIERGANPLEDAQKIRSLLSNKKEESELTMCTDVDRNDKSRICEPSSVRVLGRRQIEMYSRLIHTVDHVEGYLRKGFDALDAFLCHTWAVTVTGAPKTWAIRFVEQNEASPRAWYGGAVGLVGFDGHLNTGLTLRTVRVKDGIAEVRAGATLLFDSEPALEEAETELKASAMIDAVTRGDPRPGATGSEEAFKTSISTGVGKSVLLVDHEDSFVHTLGNYLRQTGAEVSTVRSGDPLVAYLRGVRN-GKQP 2082
            LSLGAP+ RP    Y T+G V+V+  V           ++VP      VE LV+ LD++RGVLLTSSYEFPGRYARW+LGF DPPLE+SGTG+   +RALND                                              PPP    FS+E+RS+QPSLFSVVRA V+LF Y+G D QLGLYGAFGYDLTFQF+ I L   RD +Q+DLLLYLPD+++V++         QDK+DAW+I YDF     +T+G+PR G+   ++P D+           RDTP  +++K V+KAK EFKVGNLFE VLSQTF++   +   P+ +FRRLR RNPSPYGF INLG+ EY+VGASPEMFVRCE           +RVETCPISGT+ RGA+ LEDAQ+++SL+ N KEESELTMCTDVDRNDKSRICEP SV+V+GRRQIEMYSRLIHTVDHVEGYLR  FDALDAFLCHTWAVTVTGAPKTWAI+FVE NE SPR WYGGAVGLVGFDG +NTGLTLRTVRVK G+AEVRAGATLLFDS P  EE ETELKASAMIDA+ +     G   S EA +     G GKSV+L+DHEDSFVHTLGNYLRQTGA V T+RSG   ++ +  + N GK+P
Sbjct:   65 LSLGAPQKRPSGGHYLTRGGVQVTADVKSLRFSSNKDSINVPGTSLHAVEQLVEKLDSQRGVLLTSSYEFPGRYARWSLGFVDPPLEISGTGQKCTIRALNDRGTVLLPAVIGAMKKLYEEGVLEDIVVLTGGEEESAMTSQVDVKVVPPPEVGTFSEEDRSRQPSLFSVVRALVNLFGYDGGDRQLGLYGAFGYDLTFQFEPITLAQVRDITQRDLLLYLPDEIVVVD---------QDKQDAWTISYDFCVDQKSTQGMPRVGDATPFQPFDENDAEAVENFSSRDTPRSEFSKSVEKAKYEFKVGNLFEAVLSQTFREKLDAQTPPSVLFRRLRARNPSPYGFFINLGEDEYMVGASPEMFVRCESIAENDYRPGALRVETCPISGTVARGADALEDAQRVKSLMMNAKEESELTMCTDVDRNDKSRICEPGSVKVIGRRQIEMYSRLIHTVDHVEGYLRDEFDALDAFLCHTWAVTVTGAPKTWAIQFVEDNERSPRCWYGGAVGLVGFDGGMNTGLTLRTVRVKKGVAEVRAGATLLFDSCPEAEELETELKASAMIDAIVQKGSDEGIE-SNEAKEKQFQVGAGKSVILIDHEDSFVHTLGNYLRQTGAVVRTLRSGSSALSAIEKLINEGKKP 694          
BLAST of mRNA_Ecto-sp13_S_contig701.18059.1 vs. uniprot
Match: A0A1Z5JP16_FISSO (Aminodeoxychorismate synthase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JP16_FISSO)

HSP 1 Score: 690 bits (1781), Expect = 7.740e-236
Identity = 379/668 (56.74%), Postives = 452/668 (67.66%), Query Frame = 1
Query:  361 TAQQRGFPATLSLGAPRHRPGTDGYTTKGNVEVSCKVMDVPHAEEC-----------------------VEDLVQALDARRGVLLTSSYEFPGRYARWTLGFSDPPLELSGTGRDFRVRALNDSARC---------------------------------------------PPP----FSQEERSKQPSLFSVVRAAVDLFYYEGD-PQLGLYGAFGYDLTFQFDSIPLKHERDGSQKDLLLYLPDKMLVINMNLSFFLGLQDKRDAWSIEYDFAYGGATTEGLPREGEVVAYKPSDKPGD-----RDTPPGDYAKKVDKAKEEFKVGNLFEVVLSQTFKKP--CTSSPAKVFRRLRKRNPSPYGFLINLGDQEYLVGASPEMFVRCERTRHG------IRVETCPISGTIERGANPLEDAQKIRSLLSNKKEESELTMCTDVDRNDKSRICEPSSVRVLGRRQIEMYSRLIHTVDHVEGYLRKGFDALDAFLCHTWAVTVTGAPKTWAIRFVEQNEASPRAWYGGAVGLVGFDGHLNTGLTLRTVRVKDGIAEVRAGATLLFDSEPALEEAETELKASAMIDAVTRGDPRPGATGSEEAFKTSIST---GVGKSVLLVDHEDSFVHTLGNYLRQTGAEVSTVRSGDPLVAYLRGVRNGKQPYPDLV 2097
            TA Q      LSLGAP  RP    YT++G V+++  V  +P+A                          +E+L+  LD ++GVLL SSYEFPGRYARW+LGF DPPLE+SG G D  +R+LN+                                                 PPP    FS+E+RS+QPSLFS+VRA VDLF Y+GD  QLG YGAFGYDLTFQF+ I LK +RD  Q+DL+LYLPDK++V++         QDKRD+W++ YDF+  G +T GLPR  E + + P D+        RDTP  ++A  V+KAK EF VGNLFE VLSQTF++     + P+K+FRRLR RNP+PYGFLINLG+QEYLVGASPEMFVRCE T         IRVETCPISGT+ RGA+ LEDAQ+++SL+ N KEESELTMCTDVDRNDKSRICEP SV+V+GRRQIEMYSRLIHTVDHVEGYLR  FDALDAFLCHTWAVTVTGAPKTWAI+FVE NE SPR WYGGAVG+VGFDG LNTGLTLRTVRVK+G+AEVRAGATLL+DS P  EE ETELKASAMIDA+ +  P   A  + +A    +     G GKSV+LVDHEDSFVHTLGNYLRQTGA V T+RSG   ++ +  +   K   PD+V
Sbjct:   52 TASQDAARRNLSLGAPPVRPMGGEYTSQGGVQITATVEPLPYATTXXXXXXXXXXXXXNVNDEINSMTVMEELMDQLDEKKGVLLMSSYEFPGRYARWSLGFVDPPLEISGRGADCHIRSLNERGDVLMPAVQEALQQMKRDGLLSAIEVVEEAPLNGSGKAIAKTIQAKVVPPPEVGSFSEEDRSRQPSLFSIVRALVDLFAYKGDCRQLGFYGAFGYDLTFQFEPIDLKQQRDDDQRDLVLYLPDKIVVVD---------QDKRDSWTVSYDFSVNGKSTRGLPRTTEAIPFAPFDETKTPNFTPRDTPVSEFAASVEKAKREFAVGNLFEAVLSQTFREKLGAETPPSKLFRRLRARNPAPYGFLINLGEQEYLVGASPEMFVRCEATEDNDYRPGAIRVETCPISGTVARGADALEDAQRVKSLMMNAKEESELTMCTDVDRNDKSRICEPGSVQVIGRRQIEMYSRLIHTVDHVEGYLRPEFDALDAFLCHTWAVTVTGAPKTWAIQFVEDNERSPRHWYGGAVGMVGFDGGLNTGLTLRTVRVKNGVAEVRAGATLLYDSNPVAEELETELKASAMIDAIVQDGPEDSAEAAAQAKVAKLDRQRPGQGKSVILVDHEDSFVHTLGNYLRQTGATVRTLRSGASALSTMESLI-AKGQKPDMV 709          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig701.18059.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYK6_ECTSI0.000e+097.06Aminodeoxychorismate synthase n=1 Tax=Ectocarpus s... [more]
A0A835Z6A5_9STRA1.100e-28770.31Aminodeoxychorismate synthase n=1 Tax=Tribonema mi... [more]
W7TEM3_9STRA2.340e-24561.04Aminodeoxychorismate synthase n=2 Tax=Monodopsidac... [more]
A0A7R9ZU98_9STRA8.410e-24359.47Aminodeoxychorismate synthase n=1 Tax=Pseudo-nitzs... [more]
A0A7S2HFX2_9STRA5.760e-23959.77Aminodeoxychorismate synthase n=1 Tax=Dictyocha sp... [more]
B7FRL0_PHATC6.610e-23960.75Aminodeoxychorismate synthase n=2 Tax=Phaeodactylu... [more]
A0A1E7FRX3_9STRA4.140e-23858.97Aminodeoxychorismate synthase n=1 Tax=Fragilariops... [more]
A0A448Z2I7_9STRA3.210e-23756.45Aminodeoxychorismate synthase n=2 Tax=Pseudo-nitzs... [more]
A0A7S1YQY3_9STRA5.310e-23659.22Aminodeoxychorismate synthase n=3 Tax=Ditylum brig... [more]
A0A1Z5JP16_FISSO7.740e-23656.74Aminodeoxychorismate synthase n=2 Tax=Fistulifera ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig701contigEcto-sp13_S_contig701:2..12370 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score1186.8
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FYK6
Model size2097
Hectar predicted targeting categorysignal peptide
Exons15
EggNOG free text desc.anthranilate synthase activity
EggNOG OGsCOG0147@1,COG0512@1,KOG0026@2759,KOG1223@2759
Ec32 ortholog descriptionAnthranilate Synthase
Ec32 orthologEc-02_004370.1
Cds size2097
COG Functional cat.EH
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463962.3727875-CDS-Ecto-sp13_S_contig701:1..851681463962.3727875-CDS-Ecto-sp13_S_contig701:1..85Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig701 2..85 -
1681463962.3843648-CDS-Ecto-sp13_S_contig701:844..9581681463962.3843648-CDS-Ecto-sp13_S_contig701:844..958Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig701 845..958 -
1681463962.3940341-CDS-Ecto-sp13_S_contig701:1280..14121681463962.3940341-CDS-Ecto-sp13_S_contig701:1280..1412Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig701 1281..1412 -
1681463962.4044847-CDS-Ecto-sp13_S_contig701:2222..23161681463962.4044847-CDS-Ecto-sp13_S_contig701:2222..2316Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig701 2223..2316 -
1681463962.4158766-CDS-Ecto-sp13_S_contig701:2846..29751681463962.4158766-CDS-Ecto-sp13_S_contig701:2846..2975Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig701 2847..2975 -
1681463962.4313955-CDS-Ecto-sp13_S_contig701:3446..35511681463962.4313955-CDS-Ecto-sp13_S_contig701:3446..3551Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig701 3447..3551 -
1681463962.45113-CDS-Ecto-sp13_S_contig701:4129..43261681463962.45113-CDS-Ecto-sp13_S_contig701:4129..4326Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig701 4130..4326 -
1681463962.4628825-CDS-Ecto-sp13_S_contig701:5053..51291681463962.4628825-CDS-Ecto-sp13_S_contig701:5053..5129Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig701 5054..5129 -
1681463962.472947-CDS-Ecto-sp13_S_contig701:5499..55851681463962.472947-CDS-Ecto-sp13_S_contig701:5499..5585Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig701 5500..5585 -
1681463962.483262-CDS-Ecto-sp13_S_contig701:6374..65601681463962.483262-CDS-Ecto-sp13_S_contig701:6374..6560Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig701 6375..6560 -
1681463962.494552-CDS-Ecto-sp13_S_contig701:7188..72881681463962.494552-CDS-Ecto-sp13_S_contig701:7188..7288Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig701 7189..7288 -
1681463962.507153-CDS-Ecto-sp13_S_contig701:8328..84601681463962.507153-CDS-Ecto-sp13_S_contig701:8328..8460Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig701 8329..8460 -
1681463962.5192835-CDS-Ecto-sp13_S_contig701:9458..96521681463962.5192835-CDS-Ecto-sp13_S_contig701:9458..9652Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig701 9459..9652 -
1681463962.5318384-CDS-Ecto-sp13_S_contig701:10650..107581681463962.5318384-CDS-Ecto-sp13_S_contig701:10650..10758Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig701 10651..10758 -
1681463962.541976-CDS-Ecto-sp13_S_contig701:12010..123701681463962.541976-CDS-Ecto-sp13_S_contig701:12010..12370Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig701 12011..12370 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig701.18059.1prot_Ecto-sp13_S_contig701.18059.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig701 2..12370 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig701.18059.1

>prot_Ecto-sp13_S_contig701.18059.1 ID=prot_Ecto-sp13_S_contig701.18059.1|Name=mRNA_Ecto-sp13_S_contig701.18059.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=699bp
MTPRLSTIALLCCAVGWRYTPTLEADAFVAPPLVVDNRGGVAARSPPRQL
ESLSPGERHAAPTAARPAGTRNHGEQQQRQQQQRLTMASSRLNGADVSED
LTQVNGAAAMPPPVAANTARTAQQRGFPATLSLGAPRHRPGTDGYTTKGN
VEVSCKVMDVPHAEECVEDLVQALDARRGVLLTSSYEFPGRYARWTLGFS
DPPLELSGTGRDFRVRALNDSARCPPPFSQEERSKQPSLFSVVRAAVDLF
YYEGDPQLGLYGAFGYDLTFQFDSIPLKHERDGSQKDLLLYLPDKMLVIN
MNLSFFLGLQDKRDAWSIEYDFAYGGATTEGLPREGEVVAYKPSDKPGDR
DTPPGDYAKKVDKAKEEFKVGNLFEVVLSQTFKKPCTSSPAKVFRRLRKR
NPSPYGFLINLGDQEYLVGASPEMFVRCERTRHGIRVETCPISGTIERGA
NPLEDAQKIRSLLSNKKEESELTMCTDVDRNDKSRICEPSSVRVLGRRQI
EMYSRLIHTVDHVEGYLRKGFDALDAFLCHTWAVTVTGAPKTWAIRFVEQ
NEASPRAWYGGAVGLVGFDGHLNTGLTLRTVRVKDGIAEVRAGATLLFDS
EPALEEAETELKASAMIDAVTRGDPRPGATGSEEAFKTSISTGVGKSVLL
VDHEDSFVHTLGNYLRQTGAEVSTVRSGDPLVAYLRGVRNGKQPYPDLV
back to top

mRNA from alignment at Ecto-sp13_S_contig701:2..12370-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig701.18059.1 ID=mRNA_Ecto-sp13_S_contig701.18059.1|Name=mRNA_Ecto-sp13_S_contig701.18059.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=12369bp|location=Sequence derived from alignment at Ecto-sp13_S_contig701:2..12370- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACGCCGCGCTTGTCTACGATCGCACTTCTCTGCTGCGCCGTAGGTTG GCGGTATACACCCACGCTAGAAGCAGACGCCTTCGTTGCGCCACCCCTGG TAGTCGACAACCGTGGCGGCGTGGCAGCAAGGAGCCCTCCGCGCCAACTC GAATCATTATCGCCAGGCGAGAGGCATGCAGCACCAACGGCGGCGAGACC CGCGGGAACGAGGAATCACGGCGAGCAGCAGCAGCGGCAGCAGCAGCAGC GATTGACGATGGCTTCGTCCAGGCTGAACGGTGCCGACGTCTCTGAGGAC TTGACTCAGGTCAACGGCGCGGCAGCCATGCCCCCTCCGGTTGCGGCAAA CACTGCTAGGGTGAGTGCACGACTTCGCCACCACAAGCACCGCCGAGACC GGTCTGCTGCCGACAGGGAACGGCGGCTGTTGTCGGGAGGGGGGGGGGTG CTTTTCGTAGGTTCGCGGGTGAATGGTACTGCCACGCTGCTGTATGTACC ACTTGGATCCTACAGCAAAGACGGGTGTGTGTTTGTGGCTTGCATCGTCA TGCACACAAGAGGGTGGGCGCACGCACATGCGATTCGCGGTCCTGGATAT GTTGTTCGTGCGTCGCTTGCTCTCGGGAAAGTTCCACACACAGCAAGCTG CCTCTTCATGTTCAACATCGTCCCATTGTTGTTCCCCCGCAGGCATGGCC AGAGCCGCGCGCGCGGGGGGATGCCTTTTATTGCTGTGGTCGATTCCGTT TTCCCTCCACCGACAGCTGCCAATGCCATACATACTATTACCTAGTCTCC ATACAGCAGTACGCGGCATGCTCGAAGCAGACTTGGGTATCTATGCCAAT TACTCAACCATTCATGTGTAGTCAGTACGTCCGATTGAACACAAGGACAT GCATCACCGCCATGTAGCGTTCCATGTGCGGTGCACCTTTAAGCACACAA CACGTAGCAAAAATGTGGGAAATCGGCACACCAGCGTGGAACCCCTGCTT CCGTTTTTAAGCCGACTTCACATGTATAGAGGTGAAACCGACAAGACACC GACCATCCAGCAGAGGCGCAATTCCTCTCGTGCATGTATGTGGCGAGGTC CGCTCAGCGTGGCCGATCGTACAGGTCAGCCTTCTTTATGAATTGGATTG ATCCGGACGTTCTGCAGTGTGAATGTACCAGCTAAAGAGATGCAGCCGTA TGGTCTCTCCACACGACCCGGAGATATTTCAGCGCCTGCGCGACGGCTGA GAACGAGTAGCGGTGCAGGGCTGCCATAACGATGTAGACTGACCCAAGCT GCATTATTAGTAGGTAGACGCAAGGCCGGCAGGGAGTATGGGTGCCATCA TCTCGGCGGGGAGGTGTGCCCCCCGTAGGCAGGCGTTATAGTCACGCCCA CCTGGTGCTGTAACTGGACGGTCGGTGTAAATTCACCTACGGGTTCCCTT TCGAATTGAATACTACCACCGTTGTGGTTAGTCTTTGCCCCCCTCCTCTG GCGCTTCGCCGCTTTGCATTCTCTGTCTTCCTCTCTTCCTCTCTCTCTCT ATAAGAAACCGCGCTTGTATCTTCTCCTTCGCCCCCGTCGCCTCCACTCT GCCAACTACCAGACGGCCCAGCAGCGAGGGTTTCCGGCGACTCTTTCGCT AGGAGCGCCCCGCCATCGGCCCGGGACTGACGGTTACACGACGAAGGGAA ACGTGGAGGTTTCTTGCAAGGTGCGTGGCGGTGTGATGGTGTGGCTTGTT GGCAATTGCGAACGGTGTTCAACAGAGAGAGAGAGACAGAGACAGAGAGA CAAAGAGAAGCTGTGGCAAGAACTCTCGCATGTCCTAAGACTAAACGGAC AGAGTGTACACGAACCATCGCTATGCGCGCTGCTGGTTGTATGTGTGCGG CAGCTCTGACCGCGCGTTCAATCTGCACCTAAGGAGTATCCGGGTAAGAG CTGCTACCTGCAGCAAGCTTCACGAACGAGGTTGGATGATGCCTCATGAA TGTATTGATTCTTTTAATAGCCGTCTCAGGGAGGCAAGTAGGCGGTGTCA ACGAATTAACTGCTGTGGTACACACCACATCAGCTCTTCTCACTTCGCCT GAGCGTCGGCGCCTCATCCTCTCGGGGCTACCAAGCAACCGGAGTGATTA TTGTTTTGGTGTCGGGGTTCCTATTTTTAAATAGTTGGACAAACAAAAAT ATGCGCCTGTTGTTGATGGGTTCTCGGAGTAGAAGGTATGGTGAGATAGA TGTTGACTCTCGGCTTCTCAGCTGTTGAGATAGGATAGGTGCGGTGCAGC CGAACTCGAGGTCGATGGTGTCAGTCCGAGACACGGCGGTTGATTGCCAC ACCCAAGTAACCCTGACCTCACGATACGATAAACACAAGGAGACGCACCC ACCAAGCAGTACCACCGCTACGCTCATGACCAACACATGGCATGGTACAT ATGCCCACCGTGAACAACAAGGAGCGCACCCACGACACAAAAAATTCCAC ATGTATATGTTCCACAAAGACCAGACAATTCAGAAAACATGTCCGCTATA GTAAACAACAAGACAATGACAAACAAACGAACTAACCTTTTAGTAACCAA TAAGATTGTTACTGTTGTTTTTGTTGCCTTCAACTTGAAAGCCGTTCCGG TCTCCGCTCGGTACCCTGTAATATTCGTACTGGTCCAAATGACGCAAAAC GATGCCGTAATAAAAAAGGTGATGGACGTGCCCCACGCCGAGGAGTGCGT GGAAGACCTCGTCCAAGCCCTGGACGCGAGGAGAGGCGTTCTGCTCACGT CCTCGTACGAGTTCCCCGGCCGCTACGCGCGCTGGACGCTTGGCTTCTCG GACCCGCCGCTGGAGCTCTCGGGCACCGGGCGAGACTTCAGGGTGCGAGC GCTCAACGACAGGTGCGTGAACTACTACAGTGACCTTTTTTTTTGTCGTT CTTCCTTTCTTTCGATCGTTTTTTGTTCTGTTTTATTCTTTTTGTGGTGA CTTTTTTTTGTTTCACTAACTATTCCTAACTATTCCCATCTTGCTCTCTA TTGGTTAGTCTTCCTTCCTTCCAGACGCTCTGGTGGGCTATGCGCTGCGG GCGACGTGACCTCAAGGCCTTTTTTCTCGTCGTGTTGCCCGTGTTTGATT ATGGCGTCTGTTTGGCGTGCAGGGGGCGAGTCCTGCTGCCGGCGTTCTGG GACAGGCTGTCTGAGGGCTGCTCCGCGGAGGTGGAAGGCCTGACGCTGTC CGACGACGACATCAATGGCAAGGTTAAGCAAGCGGAGGGCTACTTCAAAG AGGTGAACGGTTTGTTTTACAGTTGTTGGAAAAAAAAGAAGCGGTTTCAT GGAAAGGGCGACCACAAGAGTCACAGCATACGCTTCGTGTCATTATGTCT CCTGAGACGTATGATTGTGAAACGGACGGCTCATGTATATCTAGCATGTG TCAAAGGGCTCGAAAGGGTCTGTATCCTTTCCGGGAAAGTGTCGAGAGAA AGAGAGCATGGAAGGCGCGCAATGGTCTAGATGTGTGTTTGCGAACTGTT TTGGCAGTGTTCAGTATCGTCGACTAAAGTTGACAGCAGGCGGACCAAAT CGGCCGGCCTCACACACCCGTTTGCAACATCTGGAGGGCTAGGGCGAGAC AGGACTATTTACTACTTCTGAATGTACTACAGTGAGGAAAAAGGTACATG CCGAACTGGCGCAGGCGACACGTGTTCGAGGTGACAGACACAAGAAGATC GAACCATGCCATTGTTGTTCGCCGAAGTGTTGGTGTGTTCCAAGGGATTC ATTCTTTGCTCAGCGTCCGTCGGTCTTTACGGCATCCAATAGAGGAAGCA GTAACCAACGCTGAAAACAATGCGCGAAAATCGAATTTTATTTAATAAAC AACGAGAAAGTGCGCGATGCCCACCCCCGTTTTCGCAGGAGGAACGCAGC AAGCAGCCGTCGCTGTTCAGCGTCGTGAGGGCCGCGGTTGACCTGTTCTA CTACGAGGGGGACCCGCAGCTAGGACTGTACGGCGCATTCGGGTGAGTTC ACCTCTGCCTGCAGAAGGAAACGAAAATACAGACATGTACCTCAAGTGTA GTTGTTTTGCTTGAGAATAGGTTTGAAAGGTTGATGCATCTGTGCGTAGC AATTACTGCATGCGCAATATTTTCACGTCTCAGACCAATTTTGGGCGATA TATTTATTGTTTTGTCATGTGTGCAGAGGAATGGAAAGCGGCAAAACCCG CGTTCCCTCGAAAAACGGTCCAATAACTACTTGCGTTCGGCGTTTGGCGT ACCGCCAAACTGGAACCGCACTCACTGTTTATTTAGTCCTACCAAGATTG GAATTCTGCGGTGAAGGAGTGTTGTGCTCGTTGCACACCGAAAACATTTA TGCCATGGTATGTCTACACTTCAAGACATCCGAGCTAGCCCGTTGATACA GTTCGTTGACTCTAGGGCCGTAAACAAACCCATCCAGGAAAATAATGAGG AAGATTGGTATGATTGGTAGATTGGCTTGCATGTGTTGTTGTTCTCAAAG CTCGTTGTTGGTAAACTTGATCGACTTCATAAGTCGCGAGGGAAGGGATT GCTGTGCCCTTCTCGCGATAAAAATATCTCAGGCAGGAACCGTCGGAGGG GGTCCAGCCCCCCCCTCCTATGTGACCCCGGTTGGGTCGGCTCGCTAGTA GAAGTGGAGGATGGGTGCCAGAGAGGCAGACGACAAAGTCCAACAATGGG AGAAAAAAAAAACTCAAAGGGGGTATTCGTTCCCTCATCACGGCGGTGTA TTCCCAACCTTCTCCCACACCCGTAATGAATCCCTTCCGCTACGCAGCAA TACATTATCATTTCAGAGTTCTAGGTTGGATCCGCGACTGCGCCGTAACC AATAACACAAGACGAGGCAGGCACCCGGGTGTTTTTGGTATGAAACGCTT CTTGGCTCAGAGAACTCAACGCTTGCCAGAGCATCCCTTTTTCGTGAAGC ACCTTCCTCTCCCATACCCCCGACCCCACTCCGCGGCCCCCCTCCTACCG CCGTCGTCTCTTGCGTTTCTTTGTCACGCCAGCTACGACCTTACCTTCCA GTTCGATTCTATCCCCCTCAAGCACGAGAGAGATGGATCCCAGAAGGACT TGCTCCTCTATCTACCGGACAAGATGCTAGTAGTGGACCAGGCAAGGCTA GAGTTTTGGCCTCTAATTTGTTCCATCTGTTTTCTTCTTTGCTGTTTTTT TTTCGTGTTTGGAAGACACATGGATGCTTTTGCTTGTACTTATAACATGT GAATCTGAACGAAGGTCCGGACTAATAATAGTGAACCATCGGCAAACAGC CGGGTATTTAGTTGTGGCCGTCCTGTCACGTGTTCGTGTTGCTGGTGTAT GTCCCCGGAATACTGCTGTTTTTGGTGCCTTTCCTTCTTTTCTTTTCTTC CCACCCCCCGCTGGTGTGGTCGTGCCTTTTGTTTTCGTCGTTTCGGTCTC TGCGTTCACAATTGTAGGTGGTTTTGAGTCCCGTGATCTCCCCGCTCTCA TGCTCCCTAAAACAAACTCGGGCCGTTGTTCAACATCCGCCCCTGCTTGA TTTCTTTGTTCTCGACCCAAACTACTGACCCTTGCACACTCCTCGACATG GCAGTTCCCCCCCCCGTGCGTTAAGGTGTTGTTGTATTATTTCCCTTTCT TTCGACATCAGGCGGCACCTGCCCCAATGGTTACCTTCGAGATTACTTAC ACTTTTTGTTGTCTTTTTTTTTTCTTTTCTAAAAGCATTACAGACGAGAG TGTGGGATAGATTAACATGAATCTTTCTTTTTTTTTGGGCCTCCAGGACA AGCGGGACGCGTGGAGCATCGAGTACGACTTCGCGTACGGGGGCGCGACG ACGGAGGGGCTTCCTCGAGAGGGTGAGGTGGTTGCCTACAAGCCGTCCGA CAAGCCGGGGGACAGGGACACGCCGCCAGGGGACTACGCCAAAAAGGTAC GCATGCAAGAAGGTTGCACGAAAAAAAAGAACAAAATAAAAAAAAGGTAC ATGCGCGAGAAAGGTGCACGAAAAAAAAAACTGAAAAAAAAAGGTACACG CGGTAAACCCCATTGGCGTGCTCCGTCCCGGAATGAGAGGTCAACGGTCT AACGACTACGGCATGCACGGCTAAGGGAACACCCCCACCGCGCACATACA CACACGAATGTATGCACGCAGGGACATGTAAGTGCACACGAGTACAGATT GCGCAATCGGGTGTAGTGTTTGCCTATATCAATGGTGAGGTGAGGTGCAA GTTGTGTGCATACTGGCGGATCAAACGATTATTGGTCAATGTGCTACGCC GTGTGGCATATGCTTTCTCCTCGGGATATGGACGCACAATATACAAATCA TCGGAGGCGGTCTATTCTACAAAGAAAGCCAACAGAAAGGACGCGTGTTC ATGCTCGTGCTCCATTCCCCGCTGCCATCCAACCTTAGGCCGAAGACCAG TGACAATGGTAAGGCAATGACAAATCAGCACTTTCAAAGAGTGGAAGCAC CAACGTGATCATGAACACAAACCTGCTTCAATGTTAGGATGTTCAGTATT AAGATGGATGCTTCAGTGATGAAATCGACGCGTGGGAGTTGTGCTGCTGC GGCATCAACAACCTCGAAGGTAAGTGCAATTTGCAGGGTATTGGGAGACA GAGCCATTGATGGCTGCCTCTTGAGGTGAGTGGCCGATTCTCGCTGAACA ATACCTCCTGTGCTGTTTGCTGTTGTCTGTTGCAGGTGGACAAGGCTAAG GAGGAGTTTAAGGTCGGCAACTTGTTTGAGGTGGTCCTGAGCCAGACTTT CAAGAAGCCGTGCACGTCGAGGTAAAGTAACAGTAACAGATGGCACCGAA CTACACCAATTCTCTTTGGAGGAGCTTGTATCTGCTGCCGCTGCTGCTGT TGGCGCCTGTCTTTTTAGGAAATATACAAGAAACTTTCAACCAAAGATGG ACTATCCGTTCGAGATAAATAGCACAGTCCAAGGGTATGGGGTGAATCTC TTGTCAGTGAACGGGGGCAAAAAACCTGTCGGATACTGGACTTTTTGTGA GTTGATTTAGGCCTTTTGTCTGTTTATTGCCGTCGCAGATCCTGTTGCCG TTGTTGGCGTGTTCTCTCTCTCGCCCGCCGCTCTGATTGGCTCCCCCCCA CCGCGCCCCCCCCCCCCACGTGCGTGCTTCGCCTTCTGTAGCCCCGCGAA AGTCTTCCGACGACTACGGAAGAGAAATCCCTCCCCCTATGGCTTCCTCA TCAACTTGGGGGACCAGGTACGAGAAAAACATGCGAAATATGTCTCACTA CACCGAACAATTGTTGAAGTTATAGAAAGTGCGTTGTGAAAAGGCCCCCC GACGGTAGTAGTGAGGAGTGATTTGGTTTCGGTTTTTGCACAGCACAGCA CCTCGCACCTGCATTTATATGGTGCCGTGTTCATTTTGTGCTTGGTGGTG AGTAGTTACCAAAAGTGTCGTTGAAACACACACACACGCACACACGCACA CACGCACTTCATGTCTTTATGTCTTCATCTGTCACAGCGTCCGTCGTTAA TCCGGATAATAAATAGGCCTCCTCCCCCCTCACGGCCTCCCAGTTCACAA GCGTTTGGAAGCGTGGTGTAGCCGCGCTGAGACTGACTGACGCATTTTCA TTGCTCAGCCAGCCGATTGTGGAGCGCGGTCAATGGTTATGAATAAGACT TATGACGCATAAAATCATCTCCTGGAATATGTAAGAACGCACTGACGAAA AAACATTCCAAAGAATATGTAAAACACAACCGACGAAATAACATCCCATC CCTAGGAAATGCGCGCTTGGTGATGTGAGAGCCTGGTTCGGTGAGAAGCC GGCGTGCCTTGTCCCGTCTTTGTAGGACTACGAGGTCAATGGTCTAACGA CTACTGCATGCACGAGTGTCTAATTTATGAGTACACTCCCCATCCCCAGG AATATCTAAGAAACGCGCTGACGAAAAAAAAATTCTTTCCCCAGGAATAT CTTGTCGGCGCTTCCCCCGAAATGTTCGTCCGCTGCGAGCGCACGCGGCA CGGCATTCGCGTGGAGACGTGTCCTATCTCTGGCACGATCGAGAGGGGCG CCAACCCGCTGGAGGACGCCCAGAAGATTCGGTCTCTACTGAGCAACAAG AAGGAGGAGTCGGAGCTCACCATGTGCACCGACGTCGACAGGTTGGTTGC TGCTGTTGTTGTTGTCGTTGTTGTTGTTGTTGTTGGTTGTGGTACGGGTG ATGATAGTTATGGTGTTCTTGTTGTGATTATTGAATTTGGTGAAATTATG TTGTTGTGATCGATGCATTTGTTGTTGGGTAGTGTGATGTTGTTGGTACG GATGACGATACTACGATGGTGGTGATGTTGTTGTGGATATTGGTGTTGGT GTTGTGATGATGCTTTTTGCGAAAGAATGTATTTGTTGATGGGGAGGCGA TATTGGCCGTTACTGCTGTTGCCGTCATTACCATCGCCAGTTGCGATTAT CGTATCGTCGATCTCCTACCACCGGTCTCGTTTTGGCTTGACTTGTCTCC ACGTGATCACCAACACGTGAATGAAGTTCTTCACTTTGGAAATTACGGTG GCATACGTGATCCTGCGCGCAGTGCAGCTCAAGGTTGTTGGTCTCTTTCA TCGCGTTCGTTCGTGTTCCGCTTCAACCCCCCCCCTCTTCCCCCCTTCAA CTCCGCGTCTCCCCTCTCGCCGCCACGGATGATGCCACCGCCTTGCGCCT CTTTCTTTTTTTTTTGCAGGAACGACAAGAGCCGTATCTGCGAGCCCAGC TCGGTTCGAGTCCTCGGCAGGCGGCAGATCGAAATGTACTCGAGGCTTAT CCACACGGTTGACCACGTCGAAGGGTGGGTCGGTCTCGTGTGTCTTGCCT TGTGTTTTGTGGCGTCACCTGTTAATGCGTTCTGCTGTGTGGTGTGGCGT GGTGTGAATTGGCGTTGCTTGTTTTGCCGTGTGGCGCGGTGTGGTCCGGT GCTTGTTGCCAATGTTGATGTCACATGTATACATGCGACGCCACACGCCA GATCGCCTTAAAAAAACAGCGTTAGGTTGATCGTACTGGTTGCAACTTGG TAGAGGATGAGGAAACGTCGATGGCAGAAATTCCTTGGATTTGAGAGAGC GAAGGAAGGGGCGTTGCCTCATTTCTTGAAACAGAAATAAACTCGACCTT TCTCTCCTTAGAATGCGACTCGATTGGAGATGTTTCTTGCGCTTGATTGA GCTAAGGACGGGAGTTGTTTCGTTTCTTTGTTCGAAACTCGATCTTTTTC ATAACGCGTGTGATTCGATGCGATCCGTGTTCTGTCGGGAACTAGGTACC TCCGGAAAGGTTTCGACGCTTTAGACGCGTTCTTGTGCCACACCTGGGCC GTGACGGTTACCGGCGCGCCCAAGACGTGGGCCATCCGCTTCGTCGAGCA GAACGAAGCCAGTCCTAGGGCCTGGTGAGGGGATGGATGACGCGGAATTT GATTGATCGATCGATCTCCGGAGATGTTTGATCGATCGATCTCCGAAGAT GTTCGTTCAATCGATCTCCGGAGATGTTAGTTGTCCCGATTCAGTGGTCT TGTCATCAGAGTTTGGGGGGTGACTTGCTCGGGTTTGTCATTCCTCGAGG ACGTACTGCTGTAGAGTTGCTAGGGAGAATCGAGATGAGAAACATGGGAG ATGTAACGGTATGTTGCCCAGAGACCAGTCGAACCACGGGTAGGTCACAC AACACTGTGCAGTCGTTGCTATAATTTATCTTGAACTGTATTTTGTATCG TTGGACACGGATGGGTTTTTGTTTATATTCGAAAAGCAGCGAACAGCGGC TGGATGTAATCGATGAAAGCCGTTTTTTCTTGTGTGTGTGTTGCGTACAG CGCTACCTATCAAGGACGAGGACATCAACGGCAACGATGGTGGCAACAGC AACCGCTCGTGTGTTCGAAACAGTAAAATAAAACCATGCGTCCCTTGTCG GCAGGTACGGTGGAGCTGTTGGTCTCGTCGGGTTTGACGGGCACCTCAAC ACCGGCCTCACGCTCAGGACCGTCAGGGTCAAGGACGGCATCGCAGAGGT ACAGCAGTGCAAGTAGTACTCTACCTCTTTACTGTTCAACGCCGTATGCG TGTATGCCTGTCGTTTTCGGTCGCGGTGCGGTATGCGATATGGTGCGTGT CGTTTTTCGGGACGGTATGGTCGGTTGGCGGAGCGGTACTTCAACCGTGG CAGGGCTGGTGCGGTATACGATATATGGTATGTTCCGTTTTACACGACGG TGTTTAATGGTTACCGGAACCGTGCAACAATGCGGACGGTACGTGGGTAG TGGTACGCGATACGGTGTGCCTCGTCGTTGAAGCTACGGTGGAGGATGGG CCGTCAGGGCGAGGGACGGCATTGCAGAGATGCGGTCTTAGCGTCAAGAT GTGGTGGATGTCCGCAGCAAAAAAAAGTCGTTGGACGGAGATTTCGGAGA TGTTGGATTTCGAGTGTTGAGGCTGGCTCGGGCGAATGTCGCACTTGCTC CCGTCCAATAGCAGGAATAAATATTGAGCTTTAGGCCTATCCGATTCACA TGTTGTGTAGGCTGCCGCCTGACGCCGTAGATAAATTCATTTCTTGACAA TGCGTACAGTACCACAAGTGTATGTTTTTTTCGGTACGGTGCAGGACCGC CAGGCGATAGGGACGGAAGGCATCGCAGAGGTCCGTGTGAATTGCGAATT ACCAGGGTACGGTAGTTCAGCATTAGTGCCACCGAAAAATCGACAAAATG TGATGCCTCGAAGTACAATACATGCACACAACTAAAATGAGTTTGGGTGG ACGTCATCTCCTCCCCCCCCTCCTCCTTCCCCTTGTCCCCACGCGTTTTA CTCCAAAGGTACGTGCGGGAGCGACTCTTCTGTTCGACTCCGAGCCTGCC TTGGAGGAGGCGGAAACCGAACTAAAGGCTAGCGCGATGATCGACGCCGT GACAAGGGGCGACCCGCGGCCCGGGGCCACGGGATCGGAGGTATGGTATA GTATGGTATGGCATGACGTGGTATGGTTTAGTATGCTTTGCTATGGTATG GAATGGTATGGTGCTGTACGGTACGGTACGGTACGGTATGGTACGGTATT GTACGGTATGGTATGGTATGTGCGTTGATCGGCGGAACCCCCTCTCCTCG CGTGCTGGGGGGGCGTGGACGTGTCGGGCGACATGGCTATTGCTTTGCGA GGAGCCTGGTCATTTTTTTTCTTCGTTTTGTTGGCTTGTTGCAGGGAGAC CCCAATCCAACCCACCCAACCCAACCCCAACTTCCCTCTCCACATCGTAT GACAACTTTCAGGAGGCGTTTAAGACGTCTATCAGCACCGGGGTCGGGAA GTCTGTTCTCCTCGTGGATCACGAGGATTCCTTCGTGCACACGCTCGGCA ACTACCTTCGACAGACGGGGGCGGAGGTGCGTGTGTGTTGTGTTAACTAG CATCGACGGCGCTAGGTGTGCTTGTGGTTGACTTGGGCGTTCGACCGCAC TTTCGAACTGACCAATGAACGTACGTCAGTCACTACAGCGGGTTAATTAA GTACGCGAGCACGCTTTCGAGTCATCGGGACCCACCGACAGGGGGGGGAG GGTCCAGTCTCCGGATTCACACTGCTTGCATCCCAAAAGATGTGTCCTTG TACGTATTTTGTGTGCCGTTTGTTGTGTTCTTTGGTTGTGACACCCAGAG CCGCCCCTTTGTGAGCTCCGGCTGTTTTATTGCTCCCGTGCAGGCTTACT CTTCTTGTCCTGAAGGGTGCTCTTGAAACTGTCGCACGTGTCGAAGCGCC CGCCATCAAAACGCCTCCGTCTTATCTTGTATCTTGTGGTTTCAGTCGCC TCCTTTTCGTGCACAACAAACGAAAAAATGCGGTTTTGTTCGTCCACGCG TGCCTTGTTGATTTTGGGTCCCGTATGCTCCGCTTCTCCGCAGTGGTGCA GTGTGCGTGCTCTCTTTGTGCTGAATGGCTCTCTTGAAAATTTCGCACCT AACGAAACGCCCGCCCGCCATCAAACGCCTCCGTCTCTTGTTGTATCTTG TAATTCCTCCGCCTCCTTTTGTCGTGCACATGAGAAAAACGAACAATGTG ATTTTGCTCGTCCTCGTGTGTTTTTGGTTGTTTTCTGTCCCTACTACTCC TTGTCGTGCACACGCAAAAATAACGAAACGAAAAGGTGAGCACTGTCCGC AGTGGAGACCCCCTGGTGGCGTACCTCCGGGGGGTTCGCAATGGGAAGCA GCCCTACCCCGACCTGGTG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig701:2..12370-

>mRNA_Ecto-sp13_S_contig701.18059.1 ID=mRNA_Ecto-sp13_S_contig701.18059.1|Name=mRNA_Ecto-sp13_S_contig701.18059.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2097bp|location=Sequence derived from alignment at Ecto-sp13_S_contig701:2..12370- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACGCCGCGCTTGTCTACGATCGCACTTCTCTGCTGCGCCGTAGGTTG
GCGGTATACACCCACGCTAGAAGCAGACGCCTTCGTTGCGCCACCCCTGG
TAGTCGACAACCGTGGCGGCGTGGCAGCAAGGAGCCCTCCGCGCCAACTC
GAATCATTATCGCCAGGCGAGAGGCATGCAGCACCAACGGCGGCGAGACC
CGCGGGAACGAGGAATCACGGCGAGCAGCAGCAGCGGCAGCAGCAGCAGC
GATTGACGATGGCTTCGTCCAGGCTGAACGGTGCCGACGTCTCTGAGGAC
TTGACTCAGGTCAACGGCGCGGCAGCCATGCCCCCTCCGGTTGCGGCAAA
CACTGCTAGGACGGCCCAGCAGCGAGGGTTTCCGGCGACTCTTTCGCTAG
GAGCGCCCCGCCATCGGCCCGGGACTGACGGTTACACGACGAAGGGAAAC
GTGGAGGTTTCTTGCAAGGTGATGGACGTGCCCCACGCCGAGGAGTGCGT
GGAAGACCTCGTCCAAGCCCTGGACGCGAGGAGAGGCGTTCTGCTCACGT
CCTCGTACGAGTTCCCCGGCCGCTACGCGCGCTGGACGCTTGGCTTCTCG
GACCCGCCGCTGGAGCTCTCGGGCACCGGGCGAGACTTCAGGGTGCGAGC
GCTCAACGACAGTGCGCGATGCCCACCCCCGTTTTCGCAGGAGGAACGCA
GCAAGCAGCCGTCGCTGTTCAGCGTCGTGAGGGCCGCGGTTGACCTGTTC
TACTACGAGGGGGACCCGCAGCTAGGACTGTACGGCGCATTCGGCTACGA
CCTTACCTTCCAGTTCGATTCTATCCCCCTCAAGCACGAGAGAGATGGAT
CCCAGAAGGACTTGCTCCTCTATCTACCGGACAAGATGCTAGTAATTAAC
ATGAATCTTTCTTTTTTTTTGGGCCTCCAGGACAAGCGGGACGCGTGGAG
CATCGAGTACGACTTCGCGTACGGGGGCGCGACGACGGAGGGGCTTCCTC
GAGAGGGTGAGGTGGTTGCCTACAAGCCGTCCGACAAGCCGGGGGACAGG
GACACGCCGCCAGGGGACTACGCCAAAAAGGTGGACAAGGCTAAGGAGGA
GTTTAAGGTCGGCAACTTGTTTGAGGTGGTCCTGAGCCAGACTTTCAAGA
AGCCGTGCACGTCGAGCCCCGCGAAAGTCTTCCGACGACTACGGAAGAGA
AATCCCTCCCCCTATGGCTTCCTCATCAACTTGGGGGACCAGGAATATCT
TGTCGGCGCTTCCCCCGAAATGTTCGTCCGCTGCGAGCGCACGCGGCACG
GCATTCGCGTGGAGACGTGTCCTATCTCTGGCACGATCGAGAGGGGCGCC
AACCCGCTGGAGGACGCCCAGAAGATTCGGTCTCTACTGAGCAACAAGAA
GGAGGAGTCGGAGCTCACCATGTGCACCGACGTCGACAGGAACGACAAGA
GCCGTATCTGCGAGCCCAGCTCGGTTCGAGTCCTCGGCAGGCGGCAGATC
GAAATGTACTCGAGGCTTATCCACACGGTTGACCACGTCGAAGGGTACCT
CCGGAAAGGTTTCGACGCTTTAGACGCGTTCTTGTGCCACACCTGGGCCG
TGACGGTTACCGGCGCGCCCAAGACGTGGGCCATCCGCTTCGTCGAGCAG
AACGAAGCCAGTCCTAGGGCCTGGTACGGTGGAGCTGTTGGTCTCGTCGG
GTTTGACGGGCACCTCAACACCGGCCTCACGCTCAGGACCGTCAGGGTCA
AGGACGGCATCGCAGAGGTACGTGCGGGAGCGACTCTTCTGTTCGACTCC
GAGCCTGCCTTGGAGGAGGCGGAAACCGAACTAAAGGCTAGCGCGATGAT
CGACGCCGTGACAAGGGGCGACCCGCGGCCCGGGGCCACGGGATCGGAGG
AGGCGTTTAAGACGTCTATCAGCACCGGGGTCGGGAAGTCTGTTCTCCTC
GTGGATCACGAGGATTCCTTCGTGCACACGCTCGGCAACTACCTTCGACA
GACGGGGGCGGAGGTGAGCACTGTCCGCAGTGGAGACCCCCTGGTGGCGT
ACCTCCGGGGGGTTCGCAATGGGAAGCAGCCCTACCCCGACCTGGTG
back to top