mRNA_Ecto-sp13_S_contig6985.17998.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6985.17998.1
Unique NamemRNA_Ecto-sp13_S_contig6985.17998.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6985.17998.1 vs. uniprot
Match: D7FSV5_ECTSI (Fatty acid desaturase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSV5_ECTSI)

HSP 1 Score: 604 bits (1557), Expect = 1.180e-215
Identity = 294/310 (94.84%), Postives = 301/310 (97.10%), Query Frame = 1 
Query:    1 MTRLSVSAAVGAALVATSSAFTLSAVPSSSAGMSTSSGRGYRRSRACSALRQQPSMVTSVPRTVPETGTKAGAASKQRLHVQLGDAFYDLTGWRKLHPAGNHWIDRYAGRDATDVMAAFHSDEAFDRLKTLPKVKGKEIVEPNSVTKNFRAFRKELVEAGWFKRVWYKDASIFALQLGTFAAGIVLSRTNPWLGVVVLGLAHTTGGWLAHDMVHGRGKFCSAMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDIMPALWLWAPDDGRDRPWRKFQHLYWPLPFSLTFLLWRIDSVRTAVAKKLKLE 930
            MTRLSVSAAVGAALVATSSAFTL+AVPSSSA MSTSSGRG+RRSRACSA RQQPSMVTSVPRTVPETGTKAGAASKQRLHVQLGDAFYDLTGWRKLHPAGNHWIDRYA RDATDVMAAFHSD+AFDRLKTLPKVKGKEIVEPNSVTKNFRAFRKELVEAGWFKR+WYKDASI ALQ+GTFAAGIVLSRTNPWLGVVV+GLAHTTGGWLAHDMVHGRGKFCSAMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDIMP  WLWAP   RDRPWRKFQHLYWPLPFSLTFLLWRIDSVRTA+AKKLKLE
Sbjct:    1 MTRLSVSAAVGAALVATSSAFTLNAVPSSSAAMSTSSGRGHRRSRACSASRQQPSMVTSVPRTVPETGTKAGAASKQRLHVQLGDAFYDLTGWRKLHPAGNHWIDRYAERDATDVMAAFHSDDAFDRLKTLPKVKGKEIVEPNSVTKNFRAFRKELVEAGWFKRIWYKDASIVALQVGTFAAGIVLSRTNPWLGVVVMGLAHTTGGWLAHDMVHGRGKFCSAMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDIMPPFWLWAPKHRRDRPWRKFQHLYWPLPFSLTFLLWRIDSVRTAIAKKLKLE 310
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BLAST of mRNA_Ecto-sp13_S_contig6985.17998.1 vs. uniprot
Match: D7G2Y4_ECTSI (Fatty acid desaturase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y4_ECTSI)

HSP 1 Score: 429 bits (1104), Expect = 2.110e-147
Identity = 188/234 (80.34%), Postives = 215/234 (91.88%), Query Frame = 1 
Query:  235 LHVQLGDAFYDLTGWRKLHPAGNHWIDRYAGRDATDVMAAFHSDEAFDRLKTLPKVKGKEIVEPNSVTKNFRAFRKELVEAGWFKRVWYKDASIFALQLGTFAAGIVLSRTNPWLGVVVLGLAHTTGGWLAHDMVHGRGKFCSAMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDIM--PALWLWAPDDGRDRPWRKFQHLYWPLPFSLTFLLWRIDSVRTAVAKKLKLE 930
            +  QLGD+FYDLTGWRKLHP+G HWIDR+A RDATDVMAAFHSD+AFDRLKTLP VKGK  VEP+ VTKN+RAFRKELV+AGWF RVWYKDAS+ ALQLG FAAG++++R NPWLG +V+G+AHTTGGWLAHDMVHGRG++C+AMRHYGA+ CGLSS+WWSEKHNLHHAFTNV+G DEDI+  PALWLWAPDDGRDRPWRKFQHLYWPLPFSLTFLLWR  SV+TA+++KLKLE
Sbjct:   22 IKPQLGDSFYDLTGWRKLHPSGEHWIDRFAERDATDVMAAFHSDDAFDRLKTLPVVKGKAGVEPDDVTKNYRAFRKELVDAGWFDRVWYKDASVLALQLGAFAAGVLVTRVNPWLGTLVMGMAHTTGGWLAHDMVHGRGRYCTAMRHYGALMCGLSSRWWSEKHNLHHAFTNVIGADEDIIVEPALWLWAPDDGRDRPWRKFQHLYWPLPFSLTFLLWRFGSVKTAISEKLKLE 255
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BLAST of mRNA_Ecto-sp13_S_contig6985.17998.1 vs. uniprot
Match: A0A836CAU7_9STRA (Fatty acid desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAU7_9STRA)

HSP 1 Score: 323 bits (828), Expect = 2.330e-105
Identity = 146/254 (57.48%), Postives = 184/254 (72.44%), Query Frame = 1 
Query:  169 VTSVPRTVPETGTKAGAASKQRLHVQLGDAFYDLTGWRKLHPAGNHWIDRYAGRDATDVMAAFHSDEAFDRLKTLPKVKGKEIVEPNSVTKNFRAFRKELVEAGWFKRVWYKDASIFALQLGTFAAGIVLSRTNPWL-GVVVLGLAHTTGGWLAHDMVHGRGKFCSAMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDIM--PALWLWAPDDGRDRPWRKFQHLYWPLPFSLTFLLWRIDSVRTAVAKKL 921
            V+++P   P       A  K RLHVQ+G+A YDLTGWR  HPAG+HWIDR+  +DATDV+ AFHSDEA    + LP+ +G E VEP++ T  FR  R +LV  GWFKR W  +A +   Q+  FA G+ L+R+   L G  VLG+AHTT GWLAHD +HGRGK+ S MR++G +T GL +KWWSEKHNLHHAFTN+VGVDEDIM  PAL+LW+P + RD+PWRKFQH  WP+PFS  F +WRIDS++TA+  KL
Sbjct:   35 VSTLPDATPVAAPAVAAPKKNRLHVQIGNAVYDLTGWRAKHPAGSHWIDRFHQKDATDVIYAFHSDEAMQMFERLPRARGVEAVEPDATTLKFRELRAKLVADGWFKREWQHEAFLLVAQMTQFAVGVALARSGHVLAGTCVLGVAHTTCGWLAHDFIHGRGKWPSFMRYFGCLTVGLGAKWWSEKHNLHHAFTNLVGVDEDIMVEPALYLWSPTEERDKPWRKFQHFLWPVPFSALFAMWRIDSIKTALKLKL 288
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BLAST of mRNA_Ecto-sp13_S_contig6985.17998.1 vs. uniprot
Match: A0A6H5JY43_9PHAE (FA_desaturase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY43_9PHAE)

HSP 1 Score: 292 bits (748), Expect = 8.880e-95
Identity = 124/155 (80.00%), Postives = 143/155 (92.26%), Query Frame = 1 
Query:  472 EAGWFKRVWYKDASIFALQLGTFAAGIVLSRTNPWLGVVVLGLAHTTGGWLAHDMVHGRGKFCSAMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDIM--PALWLWAPDDGRDRPWRKFQHLYWPLPFSLTFLLWRIDSVRTAVAKKLKLE 930
            +AGWF RVWYKDAS+ ALQLG FAAG++++R NPWLG +V+G+AHTTGGWLAHDMVHGRG +C+AMRHYGA+ CGLSS+WWSEKHNLHHAFTNV+G DEDI+  PALWLWAPDDGRDRPWRKFQHLYWPLPFSLTFLLWR  SV+TA+++KLKLE
Sbjct:    8 DAGWFDRVWYKDASVLALQLGAFAAGVLVTRVNPWLGTLVMGIAHTTGGWLAHDMVHGRGGYCTAMRHYGALMCGLSSRWWSEKHNLHHAFTNVIGADEDIIVEPALWLWAPDDGRDRPWRKFQHLYWPLPFSLTFLLWRFGSVKTAISEKLKLE 162
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BLAST of mRNA_Ecto-sp13_S_contig6985.17998.1 vs. uniprot
Match: A0A6U1MJH9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MJH9_9STRA)

HSP 1 Score: 290 bits (743), Expect = 2.370e-92
Identity = 135/253 (53.36%), Postives = 169/253 (66.80%), Query Frame = 1 
Query:  169 VTSVPRTVPETGTKAGAASKQRLHVQLGDAFYDLTGWRKLHPAGNHWIDRYAGRDATDVMAAFHSDEAFDRLKTLPKVKGKEIVEPNSVTKNFRAFRKELVEAGWFKRVWYKDASIFALQLGTFAAGIVLSRTNPWLGVVVLGLAHTTGGWLAHDMVHGRGKFCSAMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDIM--PALWLWAPDDGRDRPWRKFQHLYWPLPFSLTFLLWRIDSVRTAVAKKL 921
            V +VP  V E      A    RL V L   +YDLT WR  HPAG HWIDR  G+DATDVM AFHS+EA    + LPK +G+E    +  T  FR FR +LV  GWFKR W ++A +  L L T A  + L++    LG++ LG+   TGGWL+HD VHGRG +C+ MR++G ++ GLS KWWSEKHN HHA+TNV+GVDEDIM  PAL+LW PD  +D PWR+FQHLYW +PFS+T  LWR DS++  V  KL
Sbjct:   42 VVAVPSDVKEDARNV-ATKTDRLEVALDGVWYDLTRWRSSHPAGEHWIDRMNGKDATDVMTAFHSEEAMKMFQGLPKAQGREDPVVDQTTLEFRKFRAQLVADGWFKRNWVQEAKVLGLWLTTCAVSVWLAKVCAPLGLIGLGIVSATGGWLSHDYVHGRGPWCTFMRNFGCLSIGLSPKWWSEKHNKHHAWTNVIGVDEDIMVDPALFLWQPDPSKDVPWRRFQHLYWAVPFSITLWLWRFDSIKRVVKDKL 293
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BLAST of mRNA_Ecto-sp13_S_contig6985.17998.1 vs. uniprot
Match: L1IL22_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IL22_GUITC)

HSP 1 Score: 261 bits (667), Expect = 8.990e-82
Identity = 127/239 (53.14%), Postives = 160/239 (66.95%), Query Frame = 1 
Query:  232 RLHVQLGDAFYDLTGWRKLHPAGNHWIDRYAGRDATDVMAAFHSDEAFDRLKTLPKVKG--KEIVEPNSVTKNFRAFRKELVEAGWFKRVWYKDASIFALQLGTFAAGIV-----LSRTNPWLGVVVLGLAHTTGGWLAHDMVHGRGKFCSAMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDIM--PALWLWAPDDGRDRPWRKFQHLYWPLPFSLTFLLWRIDSVRTAVAKKL 921
            +L V++ D +YDL+ WRK HPAG HWID Y  +DAT+VM  FHSD+  + LK LPK K   + + EP+S T NFR FRK+LV+ GWF+R W  +A  F L    FAA +V     L R  P     VLG+++T  GWL+HD VHGRGKF   MR +G +  G+   WWS+KHNLHHA TN VG+DEDI   PAL++WAPD   D PWRK+Q LY PLP SL F +WR DS++ AV +KL
Sbjct:    3 QLRVRIDDVWYDLSRWRKAHPAGTHWIDLYRDQDATEVMYGFHSDKGMEMLKRLPKAKTVPEGVKEPSSATMNFRKFRKQLVDDGWFERDWAHEA--FNLGSWAFAAAMVRCPYTLKRCIPVTLSQVLGVSNTIAGWLSHDYVHGRGKFADFMRPFGYLCGGMGPTWWSDKHNLHHARTNEVGIDEDIATDPALYIWAPDPKNDAPWRKYQGLYLPLPMSLLFFIWRFDSIKVAVERKL 239
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BLAST of mRNA_Ecto-sp13_S_contig6985.17998.1 vs. uniprot
Match: A0A7S2AXE7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AXE7_9STRA)

HSP 1 Score: 259 bits (663), Expect = 7.560e-80
Identity = 118/241 (48.96%), Postives = 159/241 (65.98%), Query Frame = 1 
Query:  226 KQRLHVQLGDAFYDLTGWRKLHPAGNHWIDRYAGRDATDVMAAFHSDEAFDRLKTLPKVKGKEI-------VEPNSVTKNFRAFRKELVEAGWFKRVWYKDASIFALQLGTFAAGIVLSRTNPWLGVVVLGLAHTTGGWLAHDMVHGRGKFCSAMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDIM--PALWLWAPDDGRDRPWRKFQHLYWPLPFSLTFLLWRIDSVRTAVAKKL 921
            + RL V++ D +YDLTGWRK HP+G+HWID Y   DAT+VM AFHSD A   L  LPK +  EI       ++ + V++ FRA R +L E GWFKR  + +A                +R N  +  ++LG+A+T+ GWLAHD +HGRGK+   MR +G +  G+S+ WWS+KHNLHHA TNV G+DED+M  P L++WAPD   D P+RKFQHLYW LP+S+ F +WRIDS++ A  +KL
Sbjct:   95 RDRLVVRMDDEWYDLTGWRKAHPSGSHWIDLYNNADATEVMYAFHSDTARKMLPRLPKARPNEIPTGEDAPIDVSPVSRGFRALRVKLEEEGWFKRKAWPEAKNLIKWTALMGVAAAFARRNTLISALLLGIANTSAGWLAHDYIHGRGKWAMTMRAFGMLGGGMSATWWSDKHNLHHALTNVAGIDEDLMVDPFLYMWAPDPKNDSPFRKFQHLYWMLPYSMLFAIWRIDSIKVAFKRKL 335
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BLAST of mRNA_Ecto-sp13_S_contig6985.17998.1 vs. uniprot
Match: A0A0M0JBD4_9EUKA (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JBD4_9EUKA)

HSP 1 Score: 255 bits (651), Expect = 9.580e-78
Identity = 123/268 (45.90%), Postives = 167/268 (62.31%), Query Frame = 1 
Query:  157 QPSMVTSVPRTVPETGTKAGA---------ASKQRLHVQLGDAFYDLTGWRKLHPAGNHWIDRYAGRDATDVMAAFHSDEAFDRLKTLPKVK--GKEIVEPNSVTKNFRAFRKELVEAGWFKRVWYKDASIFALQLGTFAAGIVLSRTNPWLGVVVLGLAHTTGGWLAHDMVHGRGKFCSAMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDIM--PALWLWAPDDGRDRPWRKFQHLYWPLPFSLTFLLWRIDSVRTAVAKKL 921
            +P+   +   T P +G+ A +         A+++ L ++L   +YDL  WR  HP G HWID +A RDATDV  AFHS +A    K LP+++     +  P+ +T +FR  R ELV  GW++RVW+++A+     L  FA G  L+R  PWL  V+L L  T+ GW+AHD VHGRG+FC+ MR +GA+  G S+ WWS KHNLHHA TN VGVDEDIM  P  +LWAPD  RD  WR+ QH+Y    +S+ F LWR++SVRT    +L
Sbjct:   86 EPASAAAPTATAPASGSAAASVADVQGRRGAARESLPLRLDGEWYDLHAWRAAHPGGTHWIDGFAHRDATDVFHAFHSADATAMTKRLPRLRMPPPSLPPPSDLTLSFRRLRDELVREGWYERVWWREAANLTPVLALFAIGSHLARPMPWLATVLLALGSTSAGWVAHDFVHGRGRFCATMRGFGALFNGHSATWWSNKHNLHHACTNQVGVDEDIMADPFFFLWAPDPARDSRWRRLQHVYALPVYSVLFALWRLNSVRTVFTSRL 353
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BLAST of mRNA_Ecto-sp13_S_contig6985.17998.1 vs. uniprot
Match: A0A7S3WG10_9SPIT (Hypothetical protein n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3WG10_9SPIT)

HSP 1 Score: 253 bits (645), Expect = 1.350e-77
Identity = 125/262 (47.71%), Postives = 161/262 (61.45%), Query Frame = 1 
Query:  163 SMVTSVPRTVPETGTKAGAASKQRLHVQLGDAFYDLTGWRKLHPAGNHWIDRYAGRDATDVMAAFHSDEAFDRLKTLPKVKG--KEIVEPNSVTKNFRAFRKELVEAGWFKRVWYKDASIFALQLGTFAAGIVLSR--TNP---WLGVVVLGLAHTTGGWLAHDMVHGRGKFCSAMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDIM--PALWLWAPDDGRDRPW-RKFQHLYWPLPFSLTFLLWRIDSVRTAVAKK 918
            S+V  VP T P    K    +K RL+V++ D +YDLT WR  HPAG HWID Y   DAT+VM AFHSD+A +  + LPK K   + +  P   T  FR  R++LV+ GWFK     +         T AAG+  +R  T P   + G+++L +A+T  GWLAHD VHGR  F  AMR +G +  G+S+ WWS KHN+HHA TN VG DEDI   PAL LW PD   D PW R++QH+YWPLP+S+ FL WR DS+R  +  K
Sbjct:   38 SVVAQVPETAPPANAKVPKPTKGRLNVRIDDEWYDLTNWRAAHPAGTHWIDAYNNSDATEVMYAFHSDKAINMFQRLPKSKSPPEGVRPPTEATYAFRELRQKLVDEGWFKTQPLGEVKKLLPWAATLAAGVSFARSATGPVKAFAGILLLAVANTLAGWLAHDYVHGRQPFAWAMRGFGELVGGMSTTWWSNKHNMHHALTNEVGYDEDIALDPALHLWQPDPKNDVPWLRRWQHVYWPLPYSILFLYWRFDSIRYVLKHK 299
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BLAST of mRNA_Ecto-sp13_S_contig6985.17998.1 vs. uniprot
Match: A0A6V2NBU4_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6V2NBU4_EMIHU)

HSP 1 Score: 239 bits (611), Expect = 3.890e-72
Identity = 118/241 (48.96%), Postives = 150/241 (62.24%), Query Frame = 1 
Query:  223 SKQRLHVQLGDAFYDLTGWRKLHPAGNHWIDRYAGRDATDVMAAFHSDEAFDRLKTLPKVKGKEIVEPNSV------TKNFRAFRKELVEAGWFKRVWYKDASIFALQLGTFAAGIVLSRTNPWLGVVVLGLAHTTGGWLAHDMVHGRGKFCSAMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDIM--PALWLWAPDDGRDRPWRKFQHLYWPLPFSLTFLLWRIDSVRTAVAKKL 921
            S   L V++   ++DL  WR  HPAG HW+D +AGRDATDVM AFHS++A   L  LP++     V+P S+      T  FR  R  LV  GW++R+W+++A      L  +  G  L+R  P L  V L L  T+ GW+AHD VHGRG+FC+AMR +GA+  G SS WWS KHNLHHA TN VGVDEDIM  P  +LW PD  RD  WR+ QHLY    +S  F LWR +S RT  +K+L
Sbjct:  226 SPAALPVRIDGEWFDLRRWRATHPAGVHWLDGFAGRDATDVMHAFHSEDAVAMLSRLPRLSA--AVQPPSLPPASALTLGFRRLRARLVAEGWYERLWWREAQNLLPCLACYGVGWRLARAAPLLATVSLALGSTSAGWIAHDFVHGRGRFCAAMRGFGALMNGHSSTWWSNKHNLHHACTNQVGVDEDIMSDPFFFLWPPDPARDSRWRRLQHLYALPVYSALFALWRFNSARTVWSKRL 464
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6985.17998.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSV5_ECTSI1.180e-21594.84Fatty acid desaturase n=2 Tax=Ectocarpus TaxID=287... [more]
D7G2Y4_ECTSI2.110e-14780.34Fatty acid desaturase n=1 Tax=Ectocarpus siliculos... [more]
A0A836CAU7_9STRA2.330e-10557.48Fatty acid desaturase n=1 Tax=Tribonema minus TaxI... [more]
A0A6H5JY43_9PHAE8.880e-9580.00FA_desaturase domain-containing protein n=1 Tax=Ec... [more]
A0A6U1MJH9_9STRA2.370e-9253.36Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
L1IL22_GUITC8.990e-8253.14Uncharacterized protein (Fragment) n=1 Tax=Guillar... [more]
A0A7S2AXE7_9STRA7.560e-8048.96Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A0M0JBD4_9EUKA9.580e-7845.90Cytochrome b5 heme-binding domain-containing prote... [more]
A0A7S3WG10_9SPIT1.350e-7747.71Hypothetical protein n=2 Tax=Choreotrichia TaxID=1... [more]
A0A6V2NBU4_EMIHU3.890e-7248.96Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6985contigEcto-sp13_S_contig6985:1255..7494 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score606.7
Seed ortholog evalue6.2e-171
Seed eggNOG ortholog2880.D7FSV5
Model size930
KEGG koko:K21737
Hectar predicted targeting categorychloroplast
GOsGO:0000003,GO:0001505,GO:0001820,GO:0002682,GO:0003008,GO:0003012,GO:0003674,GO:0003824,GO:0004768,GO:0005575,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006636,GO:0006810,GO:0006811,GO:0006812,GO:0006836,GO:0006837,GO:0006936,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0007271,GO:0007275,GO:0007588,GO:0007610,GO:0007631,GO:0008104,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009914,GO:0009987,GO:0010817,GO:0014055,GO:0015695,GO:0015696,GO:0015844,GO:0015850,GO:0015870,GO:0015893,GO:0016020,GO:0016021,GO:0016053,GO:0016192,GO:0016197,GO:0016215,GO:0016491,GO:0016705,GO:0016717,GO:0018991,GO:0019098,GO:0019752,GO:0022414,GO:0023052,GO:0023061,GO:0030421,GO:0031224,GO:0031347,GO:0032456,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032940,GO:0033036,GO:0033559,GO:0035264,GO:0040002,GO:0040007,GO:0040011,GO:0042221,GO:0042335,GO:0042493,GO:0042755,GO:0043050,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044425,GO:0045088,GO:0046394,GO:0046879,GO:0046903,GO:0046907,GO:0048583,GO:0048589,GO:0048609,GO:0048856,GO:0050776,GO:0050789,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055114,GO:0061526,GO:0065007,GO:0065008,GO:0071702,GO:0071704,GO:0071705,GO:0072330,GO:0080134,GO:0098916,GO:0099536,GO:0099537,GO:0099643,GO:1901374,GO:1901576
Exons6
EggNOG free text desc.unsaturated fatty acid biosynthetic process
EggNOG OGsCOG3239@1,KOG4232@2759
Ec32 ortholog descriptionFatty acid desaturase
Ec32 orthologEc-19_001920.1
EC1.14.19.38,1.14.19.47
Cds size930
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6985.17998.1prot_Ecto-sp13_S_contig6985.17998.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6985 1255..7494 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463957.46015-CDS-Ecto-sp13_S_contig6985:1254..15001681463957.46015-CDS-Ecto-sp13_S_contig6985:1254..1500Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6985 1255..1500 +
1681463957.4752371-CDS-Ecto-sp13_S_contig6985:3539..36171681463957.4752371-CDS-Ecto-sp13_S_contig6985:3539..3617Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6985 3540..3617 +
1681463957.4858894-CDS-Ecto-sp13_S_contig6985:4503..46471681463957.4858894-CDS-Ecto-sp13_S_contig6985:4503..4647Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6985 4504..4647 +
1681463957.4960191-CDS-Ecto-sp13_S_contig6985:6306..64911681463957.4960191-CDS-Ecto-sp13_S_contig6985:6306..6491Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6985 6307..6491 +
1681463957.5083969-CDS-Ecto-sp13_S_contig6985:6944..70681681463957.5083969-CDS-Ecto-sp13_S_contig6985:6944..7068Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6985 6945..7068 +
1681463957.518312-CDS-Ecto-sp13_S_contig6985:7341..74941681463957.518312-CDS-Ecto-sp13_S_contig6985:7341..7494Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6985 7342..7494 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6985.17998.1

>prot_Ecto-sp13_S_contig6985.17998.1 ID=prot_Ecto-sp13_S_contig6985.17998.1|Name=mRNA_Ecto-sp13_S_contig6985.17998.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=310bp
MTRLSVSAAVGAALVATSSAFTLSAVPSSSAGMSTSSGRGYRRSRACSAL
RQQPSMVTSVPRTVPETGTKAGAASKQRLHVQLGDAFYDLTGWRKLHPAG
NHWIDRYAGRDATDVMAAFHSDEAFDRLKTLPKVKGKEIVEPNSVTKNFR
AFRKELVEAGWFKRVWYKDASIFALQLGTFAAGIVLSRTNPWLGVVVLGL
AHTTGGWLAHDMVHGRGKFCSAMRHYGAVTCGLSSKWWSEKHNLHHAFTN
VVGVDEDIMPALWLWAPDDGRDRPWRKFQHLYWPLPFSLTFLLWRIDSVR
TAVAKKLKLE
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mRNA from alignment at Ecto-sp13_S_contig6985:1255..7494+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6985.17998.1 ID=mRNA_Ecto-sp13_S_contig6985.17998.1|Name=mRNA_Ecto-sp13_S_contig6985.17998.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6240bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6985:1255..7494+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACGCGCTTGTCCGTAAGCGCGGCGGTGGGTGCTGCCCTGGTCGCCAC
CTCTTCCGCCTTCACCCTGAGCGCGGTCCCCTCTTCGTCAGCAGGGATGT
CGACATCGTCGGGCCGGGGCTACAGGAGGAGTCGCGCGTGTTCGGCATTG
CGGCAGCAGCCGAGCATGGTCACTTCGGTACCGAGAACTGTGCCCGAGAC
GGGCACTAAGGCGGGCGCGGCGTCGAAGCAGAGACTGCACGTACAGGTCG
GTCCAGTTCTGCTGGTACAATAGTCCTTCCTGGTCTTTGGTATCTTCTGT
GTTGGTCGCTACCAGCTAGCGTCTCGGCCTTAGCTGCTCCACCCGCCTCT
CTAGGCATCTCTGTGTCATAGCAGTCACAGTAGTGTGCGCGGGGGGAGGG
GCGAGCTGTCCGACATCCTGGCTGAGTAGCCACTAACCAACCAACGGCGT
GTGTGTGTTCGATGCTGCTGACGAAAACGTATCCTTTTTTTTTTGCCCCA
CGGTGGTGCGGCGTTCATGTAAAAGAATGGACACGTACGCGCGCCTGTCA
TCACGCACATCTTTCGTGAGAGGCCGCACACGCTCCGGTAAGATTCGAAA
ACGTGTGTTACGTGTGCTGGTCACATATGGAGTACATGCCAACTCGCACA
CGTACGCCTTCCCTTATCCCGTACAGCTGAGGTGGCTGCAGTATGCGTAG
CATGTCGGTTCTCTCCCTCTCTCTCTCTCTCTCTCCCTCTCTATCTCTCT
CTGTACCGCTGCGTCGGATGTGAATGAGGGCTCTCTCTGTCTCTGTTTTT
TTGTGGAGTGAAGTTCTTTTTCTGCGTGTACAAAAAAAAACATCCTGTGA
AGTGCATCGATCGTTTTTCTGACTCACGACTCCCTTGATGTAAATAGTTT
GACACCTACGATACGTACAGCAGTAGACCAGTAAATGCCTAAAATTTATG
CATATTGTATCACTATCATATGAATAGGTAGCGGTTTCAGGTGCTCAATT
TTGTTTTGTCGGAGCGGCCGTGCCAAGCGAGCTGTTTATAGATCTATTTG
CCTCTCTGGCCGCCCTGAATGCTGCACTCGTAATTTATACTCCTGTATAT
AATTGGGATGTGGGTTGTTTAATATTTGTTTTTGGTTTGGGTTGGGGAGG
GATAGTTTTGGGTTTGGGGTTTTGGGGAGGGGAATATGGTCCAGGCTATT
GTAGTCAGCTGTGTCAATAGATTGACGTTTTTCACCGGTATTTGGAAAAA
TTAACCCACAGAAAGACCACGCGTTCGAGATATTCCCACTTTCGACCGGT
ATGTAACAAGATAGGCTCTTTGAGCTCTTGGGCTCCCAGCTATCTGCGGC
AGCGATAATCGGCGCGAAACCCCCTGCCATAGAGTCTCGAGTTTATGCGA
TAGTTTAAAAACCTCTTGAGCAAAGGGAATTCCTGTTGTGCTCATCAAGA
GCGGACCCGCGCACGATGTCCTTGTTGGCCTTAATCACATCACCATTAGA
GACATGGCTTAGGCCCAACAAGGCTACTGCTGTTCGCGGCCGTCCCTTCG
ATTCGGATGTGCGAATAGGAATGTTCCTTTGCCAAAGAGGTGTAAAGCTC
GCGTACACTCGACCCGCTGCTGTGGCAAGGGGTTCGCCACTGCTGCCGTA
TGATAGCTGGGAGGGGCCCAACCGCCTCCTTTTTTGTTAGGTAAAGGCTA
TTTTAATCCGTGAGGCGACTAAGCCAGCGTCGTATGTGGGAATCGTTGAG
TAGGGAAAGGCTACTCCATTAGATCACTCAGTACGAATTAGCCTTTCATC
TTACATCAGCCACCGCTGTATGGAGGCATCTTCGGCCTTGGAACATCTCC
TTGTTTTCATTGCTAAATACTTGCTGCTGCTATATACGGCTGCTGCCTGC
CATTTTGTCGTGCGGGCGGGCGTGCATACCCACGTCTTACGATACGCCTT
TGCATACATGTTGTCGAGGCGTTTTTTTGCAACTGCAAGGGTCATGATGA
AGATACCGAAAAAATGTAGGGGTCTTCCCTCTTGACTGCGTTTTGGCTAA
TGTGCTTTCTGCGTTGGTGTTTAGACCCGAGCATACCTGCTCGCCAGTGC
AGTTCTTGAACCGCGACCGACCGTGGAGAAAGTTCAAGCTAAATGAACTC
ATCTGTTTTGTAGATAAGTGTTCGAAAACCCGGCATCGGTGTGCGCAATC
CCCCACAACGCATGCAGACGCTTTTCTAGTAGAACCAATTTTTACTCTTG
TGTATGTTGCCCTCTCTGACGCTCGTCTCGCACAGCTGGGAGACGCGTTC
TATGACTTGACGGGCTGGCGAAAGTTGCACCCGGCCGGGAACCACTGGAT
CGACCGCTACGCGGTGAGTTCAAGGCAGGCATCACGGACAAGGGGGAGGG
GAAAGGGGGTTTCTCATGCAAACGCATGCCGTAGCCGTTAATACCGTTGA
ACCCGCATCTCTACAGTGCAGGAAAGGAGCGATATGCCGGGTGTTCACTG
TCCAAGGCTACGTTTTGCGAGGATTAACCAGAAGCTGGTCATCATCATTG
CGCTTACTGTGCCACACCAGATATGCCGGTTGATTGGGCTTTGCGGCTAT
CCACAAAGGGGGAGAGGGGGGGTGGGAAAGCGGGGGGTAGTGATCTTGCG
CGCGTGAGTGAGCCCGCTCCGTGGCCGTCAAAAACATTTTCAAATTTCGC
CGTGTGTGTGTTGAGGTGTTTTTGCGTCACATTTTCCGATTTACAGGAAG
CTAAACTACCAGGACCGCTGTGTAGCATCAAACGCCAGATATGTGTCCTG
AAGTGGAAAGTAGTGTTCAGTTTTGTGAGGAAGCAATGTATTCTTTGGTT
TTTCTGGTTTTGGCTGCGGCGTTGCTTTTCGGCGCTCACACCAAGACGGC
GCCGGGTAGGAGAAACGACTGGTATCCGCAACGGACCTCCAGTCGTCTTT
GCCACGCACCAACTGCACCATTTGCGATGAAAGTTGCTCGGGAGTCCCTG
CAGCCACGCGTGCACCTGCGATCGTCATTGGTGCCCCCTTCGTTTCGTGC
CGTGAATTGTGATTCGTACAATCCCATTTCGGGTATATGACGGCAGCAGC
CACGTCTGCTGCCACCTGCCGCCGCATGATACGGTGCAAGCACACCACTG
AAACCCCCCACCCCACCCCCGCATGAAATTGCGTGGTGTTCTCTTCTTGT
TTGCGTGTCCGCTCCCTTCCGAAAAATTATTTCCGCGGACGGGTAATAGG
GACGTGACGCGACGGACGTGATGGCGGCTTTCCATTCGGACGAAGCGTTC
GACAGGCTCAAGACTCTGCCCAAGGTCAAGGGCAAGGAGATCGTCGAGCC
CAATTCCGTCACCAAGAACTTCAGGGCTTTCCGGAAGGAGCTGGTAAGGA
GGTTTTAGGGGGGGCTGGGGGGGGGGGCGGCATGGTTGTTTCCGCCGGAG
GCGGGAGGGAAGAGGGAGTACTCTTGTTTTGTCTGCAGTTACGCGGTCAA
ACGATGAGCGGAATAGCGGGAGAGGGGGGAAGACGGGGTGGATACTGGTG
TTCCGCCTAGCGTAAGGCAGTTGAACGATGAACGGAGTAGTGGGGGGGGG
GGGGGGGGATGGTGTGGATACTCGTGTGTTGCCTATTGTGAGGCGGATGG
ACGATGAACGGAAAAGCGGGGGGTCGGGGGGGGGGGGGGGGGGGTGGATA
CTCGCGTGTCGCCTGGTGTAAGGCGGTTGGAGGATGAGGGCGCATCCACT
TCACTAAGACAGAGGCTTGCCCCAGTTGGAGGGGGGATCGAGAGGCGGTT
CTAATGCTGCACAGTGGCCCTTGTGTGGCTGACGTTTGGCCTGATTGAAC
GTGTTTTTTCAGCGGCAGTCATGGGGAAAGCGTGTCTGAGCACGACCAGT
TTTTGATTCCGGTTCAGCGTTCGTTCCCGCGAAGGCTGGCGACATTCGGG
CTGCCACTCGCAACAGCCTGTTTTGGGCAGGCAGCGGCGTTGGCCACTCG
TGCAGAAGCGGCGCCATCTGTAGCCCAGCGACTGGGCCATAAATCGCGCC
GCTTTTACTCGAGCAGCCACCGCCGCCGCCTGCCGAAAGGCCGACTGTTG
CGCGTGGCAGCTTCACTGTGTCCAGCCTACGCAGGAACGAACACAAGTCG
GGGTGAAGCTTGTGCGTCAATTTCGTGGTGAAAAACAGGTCAAATGTACA
CGCAAGACTCACCCACAGTCGTGACGGAGAATCGTACACTCTCCTTTCCT
CAGGTGCTACTAGAAGGGGGGACTGGCCTCTGTGTTTGGTTTTCAGTGCC
CCGTTTAGTCTGTGTGGTAAAGGAATAGGTGTGTGATGTCCAACGCCTAT
CGCTTCCCCCCACCCCCCAAGTTATCCTCGAGAGGTGGGGGCGGTTCCGA
TTTGTTCAGTTGTCCGGCATCAAAAGTCCCATCGTGGAAACTTTCACTCC
GAACCGATAGCAGTATGTTCGGGTGTGGGCGGATGTGGTTCCTACCCGCG
CTCTGGGTTCATCCACCAAAACTTGAACTTTCGCCCTCTTTTCACCCCGC
TTGTTGCGTGTCCGTTGTGTTGAGGTGGAAGCAGACTAGTGTGAGCCGAA
ATATTAATATTTGAGTGTTCATCGATCAACATTCGAAATCTTCAAAAACA
CTCCGCTTGCTGTCACTACATATAGGTGGAAGGTGGGCTGGTTCCAGCCG
TTCCGTGCGGCTCATTCACTGAAGCCCTTTATCCGTGAAAAATATACCTC
TTGTTGCCTAGTCCTTGTGTGCAGGTGGAGGTACGCCGGTTTGAGCCGTA
TTTGTCCGACGAACATGCTCATCTCGTAAGACTAGGATAACCCACTCGCT
TTCACTAACAAGGGTCGAGGCTGGCTGGTTTACACCGTGCTAGGCCTTCA
TCAATCAAAGCAAATACTTAAATATCTCGTGTTGCCTGATCCCTGTGTTC
AGATTGTAGAAGCACACCTGTTCGAGGCTGACCCGTGCTTTCCATCCCAC
CAAGGTACATACTAACCTCCAGATAAACTTGTTGTTGCCATTCACATAAC
AGGTGGAGGCGGGGTGGTTTAAGCGCGTCTGGTACAAGGACGCGTCCATC
TTCGCGTTGCAGCTCGGAACCTTCGCGGCGGGCATCGTCTTGTCGCGCAC
GAACCCGTGGCTCGGGGTCGTCGTGCTGGGCCTGGCCCACACCACTGGGG
GCTGGCTGGCGCACGACATGGTGCACGGCCGGGGGAAGTGAGTGAGCGAG
CGACGCCCTCAACAGTTTTCATTATTCGACTCTGACAATGGTTGTGTTTT
TCTTGGTGTGCTTGTGACCCATGACGTCACAATCGAGAGCGCGCGATGCA
TCTTTATTATTTTTGAAGCGACGTCTCGGGTGTATTATTTCCTTTTGCGT
GTGTTTTTTTTTTGTGTCGTGGTGTAGACAGACTGTGTAAATACTAGAAA
ACGACATAAAGAAAGACAATGCGCCATTATGCCTTCTTTGGTTCCCTGTT
ATCGTTTCATTTGTGATGGCGACCACGTCGTGCTCCTACTTGTTGTCATT
TGTTGTTGTGTTTCGGTTTGTGGGAGCGATCGATGTTCATTTACGGTAAC
ATTGTCCGTGATGGGCGACGTCTCTGACCTTTCTATTTTAACCCGCCGAC
CATTGTTCCTGCTTCTGCTGGCCATTCTTCGTTCCCCCAGGTTCTGCAGC
GCGATGCGGCACTACGGGGCGGTTACATGCGGCCTGAGCTCTAAGTGGTG
GTCAGAGAAGCACAACCTCCACCACGCATTCACCAATGTTGTTGGTGTCG
ACGAAGACATCATGGTGAGACAACAGATAACCTACAGCACTGCTGCCGGT
GTTTCATCCTTGGCCAATGAACACAATTTTCGAGTGCGATGGTGTGCAGG
TTTTATTTTCAAGTTACATAAACATTTCTGTCCGCCCCCCCCCCCGTGTT
TTGAAGTAGCCTCATGCATATGTACCACATTTATTTTTGTGAGGTCCTCT
TATTATTTTTTCGTTCTTTTTTTCTTGGAAAATCATTTCCCTTTCTACCA
ATATTTTTTTTTTTCTTTCTCTCTTGGAAAGGTGGAGCCTGCGTTGTGGC
TGTGGGCACCAGACGACGGGCGCGACCGACCGTGGAGAAAGTTCCAGCAC
CTCTACTGGCCCTTGCCGTTCTCCCTGACCTTCCTGCTCTGGCGCATTGA
CTCCGTCAGGACCGCCGTCGCCAAGAAGCTCAAGCTTGAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6985:1255..7494+

>mRNA_Ecto-sp13_S_contig6985.17998.1 ID=mRNA_Ecto-sp13_S_contig6985.17998.1|Name=mRNA_Ecto-sp13_S_contig6985.17998.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=930bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6985:1255..7494+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACGCGCTTGTCCGTAAGCGCGGCGGTGGGTGCTGCCCTGGTCGCCAC
CTCTTCCGCCTTCACCCTGAGCGCGGTCCCCTCTTCGTCAGCAGGGATGT
CGACATCGTCGGGCCGGGGCTACAGGAGGAGTCGCGCGTGTTCGGCATTG
CGGCAGCAGCCGAGCATGGTCACTTCGGTACCGAGAACTGTGCCCGAGAC
GGGCACTAAGGCGGGCGCGGCGTCGAAGCAGAGACTGCACGTACAGCTGG
GAGACGCGTTCTATGACTTGACGGGCTGGCGAAAGTTGCACCCGGCCGGG
AACCACTGGATCGACCGCTACGCGGGACGTGACGCGACGGACGTGATGGC
GGCTTTCCATTCGGACGAAGCGTTCGACAGGCTCAAGACTCTGCCCAAGG
TCAAGGGCAAGGAGATCGTCGAGCCCAATTCCGTCACCAAGAACTTCAGG
GCTTTCCGGAAGGAGCTGGTGGAGGCGGGGTGGTTTAAGCGCGTCTGGTA
CAAGGACGCGTCCATCTTCGCGTTGCAGCTCGGAACCTTCGCGGCGGGCA
TCGTCTTGTCGCGCACGAACCCGTGGCTCGGGGTCGTCGTGCTGGGCCTG
GCCCACACCACTGGGGGCTGGCTGGCGCACGACATGGTGCACGGCCGGGG
GAAGTTCTGCAGCGCGATGCGGCACTACGGGGCGGTTACATGCGGCCTGA
GCTCTAAGTGGTGGTCAGAGAAGCACAACCTCCACCACGCATTCACCAAT
GTTGTTGGTGTCGACGAAGACATCATGCCTGCGTTGTGGCTGTGGGCACC
AGACGACGGGCGCGACCGACCGTGGAGAAAGTTCCAGCACCTCTACTGGC
CCTTGCCGTTCTCCCTGACCTTCCTGCTCTGGCGCATTGACTCCGTCAGG
ACCGCCGTCGCCAAGAAGCTCAAGCTTGAG
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