mRNA_Ecto-sp13_S_contig6956.17964.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6956.17964.1
Unique NamemRNA_Ecto-sp13_S_contig6956.17964.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6956.17964.1 vs. uniprot
Match: D8LJN0_ECTSI (Serine/Threonine Dehydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJN0_ECTSI)

HSP 1 Score: 665 bits (1715), Expect = 6.650e-239
Identity = 341/348 (97.99%), Postives = 345/348 (99.14%), Query Frame = 1
Query:    1 MEEASHEPSAEPDAVSIAGIRQAAARIGPHVHYTPVVTCRALDEMSGGREVFFKCELFQKTGSFKARGACNAVLLTPPECRDIVTHSSGNHAQALAWAASVKGVNAHIVMPHNSMAVKVAAVRDYGASITLCENTKSGRETTAAAVVSGHPLSTLIHPYNDPRVQCGQGTVGLELVQQVKAQTGGAGLDAVVVPVGGGGLITGVATAVKALCPGIRVIGAEPSKAADAFRSKQSGSLQGHDCEGMPDTIADGLRTTLGSTTWPVVRDSVDEIVTVSEEEIRLWMRVVYERMKLVIEPSAAVGVAAVMSPRVRGMPQDVKRVGVVLCGGNVDVTLLQDLLAGGGSPLPV 1044
            MEEASHEPSAEP+AVSIAGIRQAAARIGPHVHYTPV+TCRALDEMSGGREVF KCELFQKTGSFKARGACNAVLLTPPECRDIVTHSSGNHAQALAWAASVKGVNAHIVMPHNSMAVKVAAVRDYGASITLCENTKSGRETTAAAVVSGHPLSTLIHPYNDPRVQCGQGTVGLELVQQVK QTGGAGLDAVVVPVGGGGLITGVATAVKALCPGIRVIGAEPSKAADAFRSKQSGSLQGHDCEGMPDTIADGLRTTLGSTTWPVVRDSVDEIVTVSEEEIRLWMRVVYERMKLVIEPSAAVGVAA+MSPRVRGMPQDVKRVGVVLCGGNVDVTLLQDLLAG G+PLPV
Sbjct:    1 MEEASHEPSAEPEAVSIAGIRQAAARIGPHVHYTPVMTCRALDEMSGGREVFLKCELFQKTGSFKARGACNAVLLTPPECRDIVTHSSGNHAQALAWAASVKGVNAHIVMPHNSMAVKVAAVRDYGASITLCENTKSGRETTAAAVVSGHPLSTLIHPYNDPRVQCGQGTVGLELVQQVKEQTGGAGLDAVVVPVGGGGLITGVATAVKALCPGIRVIGAEPSKAADAFRSKQSGSLQGHDCEGMPDTIADGLRTTLGSTTWPVVRDSVDEIVTVSEEEIRLWMRVVYERMKLVIEPSAAVGVAALMSPRVRGMPQDVKRVGVVLCGGNVDVTLLQDLLAGDGNPLPV 348          
BLAST of mRNA_Ecto-sp13_S_contig6956.17964.1 vs. uniprot
Match: D7FHM2_ECTSI (Serine Racemase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHM2_ECTSI)

HSP 1 Score: 476 bits (1225), Expect = 4.610e-164
Identity = 249/333 (74.77%), Postives = 286/333 (85.89%), Query Frame = 1
Query:   34 PDAVSIAGIRQAAARIGPHVHYTPVVTCRALDEMSGGREVFFKCELFQKTGSFKARGACNAVLLTPPECRDIVTHSSGNHAQALAWAASVKGVNAHIVMPHNSMAVKVAAVRDYGASITLCENTKSGRETTAAAVVSGHPLSTLIHPYNDPRVQCGQGTVGLELVQQVKAQTGGAGLDAVVVPVGGGGLITGVATAVKALCPGIRVIGAEPSKAADAFRSKQSGSL-QGHDCEGMPDTIADGLRTTLGSTTWPVVRDSVDEIVTVSEEEIRLWMRVVYERMKLVIEPSAAVGVAAVMSPRVRGMPQDVKRVGVVLCGGNVDVTLLQDLLAGGG 1029
            P  +S+AGIR+AA RI PH   TPV+TC AL+EMSG REVFFKCELFQKTGSFKARGACNAVLLTPPEC  +VTHSSGNHAQALAWAASV+G+ AHIVMP + MAVKV AVR YGAS+TLCEN+KS RE+TAA +VS  P S+LIH  ND RVQCG GT+GLELV QVK  TGGA LDAV+V +GGGGLI+GV TAVKALCP  R+IGA+P KAADAF+SKQSG+L    + E +PDTIADGLRT+LG+  WPVVRDSVDEIVTVSE++IR+WM VVY+RMKLVIEPSAAVGVAA+MSP+VR MP ++++VGVVLCGGNVDVTLLQDLL+  G
Sbjct:   34 PAVLSLAGIREAADRISPHTQITPVLTCGALNEMSG-REVFFKCELFQKTGSFKARGACNAVLLTPPECPGVVTHSSGNHAQALAWAASVRGIPAHIVMPRSCMAVKVDAVRGYGASVTLCENSKSSRESTAADIVSKLPGSSLIHSSNDARVQCGIGTIGLELVSQVKDLTGGADLDAVIVTIGGGGLISGVTTAVKALCPNARIIGAQPEKAADAFKSKQSGTLCSPAEGEALPDTIADGLRTSLGNKAWPVVRDSVDEIVTVSEDDIRVWMGVVYKRMKLVIEPSAAVGVAALMSPQVRAMPSEMRKVGVVLCGGNVDVTLLQDLLSVAG 365          
BLAST of mRNA_Ecto-sp13_S_contig6956.17964.1 vs. uniprot
Match: A0A835Z2N3_9STRA (Serine/Threonine dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2N3_9STRA)

HSP 1 Score: 347 bits (890), Expect = 1.550e-111
Identity = 209/399 (52.38%), Postives = 247/399 (61.90%), Query Frame = 1
Query:   43 VSIAGIRQAAARIGPHVHYTPVVTCRALDEMSG-GREVFFKCELFQKTGSFKARGACNAVLLTPPECRDIVTHSSGNHAQALAWAASVKGVNAHIVMPHNSMAVKVAAVRD---------------------YGASITLCENTKSGRETTAAAVVSGHPLSTLIHPYNDPRVQCGQGTVGLELVQQVKAQTGGAGLDAVVVPVGGGGLITGVATAVKALCPGIRVIGAEPSKAADAFRSK---------------------------------------------------QSGSLQGHDCEGMPDTIADGLRTTLGSTTWPVVRDSVDEIVTVSEEEIRLWMRVVYERMKLVIEPSAAVGVAAVMSPRVRGMPQDVKRVGVVLCGGNVDVTLLQDLLA 1020
            V +A I+ AA RI P+VH TPV+TC  +D+++G GR++ FKCELFQKTGSFKARGACNA LL PP CR +VTHSSGNHAQALAWAA V+GV AH VMP+++ A                             YGA + LC  +   R +TAAA+V  H  + L+H  NDPRV  GQGTVGLELV+QV+   GGA LDAV+VPVGGGGL+ GVA AV+ALCP   VIGAEPS A DA RSK                                                    +G L  HD   +PDT+ADGLRT LGS TWPVVRD VD IVTVSE+EIR  +R+VYER+KL IEPSAAVGVAA +S  V  MP  ++R+GVVLCGGNVD+  L  LLA
Sbjct:  107 VCLASIQAAARRIEPYVHRTPVMTCEGIDKLAGHGRQLIFKCELFQKTGSFKARGACNATLLLPPSCRAVVTHSSGNHAQALAWAAQVRGVRAHCVMPNDASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGADVVLCTPSYGARVSTAAALVREHD-AVLVHSSNDPRVIDGQGTVGLELVEQVREMCGGADLDAVIVPVGGGGLLAGVAVAVRALCPRALVIGAEPSAADDAARSKVRFCCGVYCAYAGSAMCLEVLVRRFRSVSEVRCALAIGAQPSAADGAARSKAAGMLLEHDT--LPDTLADGLRTVLGSWTWPVVRDQVDCIVTVSEDEIRASLRLVYERLKLAIEPSAAVGVAAALSDAVAAMP-GLRRIGVVLCGGNVDMAQLARLLA 501          
BLAST of mRNA_Ecto-sp13_S_contig6956.17964.1 vs. uniprot
Match: A0A2E3Q501_9BACT (Serine dehydratase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E3Q501_9BACT)

HSP 1 Score: 306 bits (783), Expect = 6.940e-98
Identity = 188/332 (56.63%), Postives = 222/332 (66.87%), Query Frame = 1
Query:   37 DAVSIAGIRQAAARIGPHVHYTPVVTCRALDEMSGGREVFFKCELFQKTGSFKARGACNAVLLTPPE--CRDIVTHSSGNHAQALAWAASVKGVNAHIVMPHNSMAVKVAAVRDYGASITLCENTKSGRETTAAAVVSGHPLSTLIHPYNDPRVQCGQGTVGLELVQQVKAQTGGAGLDAVVVPVGGGGLITGVATAVKALCPGIRVIGAEPSKAADAFRSKQSGSLQGHDCEGMPD-TIADGLRTTLGSTTWPVVRDSVDEIVTVSEEEIRLWMRVVYERMKLVIEPSAAVGVAAVMSPRVRGMPQDVKRVGVVLCGGNVDVTLLQDLLAG 1023
            D  +I  +R A  RI P VH TPV+ CRA+D+  G  EV  KCE  QK G+FKARGA NAVL    E   R +VTHSSGNHAQALAWAA  +GV AHIVMP N+  VK  AV  YG  I  C  T   R  T A++       T+I PY+D RV  GQGT+ LEL+ QV        L AVVVPVGGGG+I+GVAT +K +  GI VIGAEPS A DA RSKQ+GS+Q H   G P  TIADGLRTTLG  T+P++RD VDEIVTV E+ IR  +R+V ER KLVIEPSAAVG+A  M P  R   + ++R+GVVLCGGN+D+  L DLL G
Sbjct:    3 DHPTIDDVRMAMQRIEPFVHRTPVMRCRAIDDRVGC-EVHLKCENLQKVGAFKARGAMNAVLSLDDETVARGVVTHSSGNHAQALAWAARERGVPAHIVMPTNAPEVKRRAVEGYGGIIHACRPTLESRLETCASIAE-KTGGTVIPPYDDDRVIAGQGTLALELIAQVPD------LQAVVVPVGGGGMISGVATVMKGMDAGITVIGAEPSLADDACRSKQTGSIQPH--LGDPTATIADGLRTTLGERTFPIIRDLVDEIVTVQEDHIRAALRLVLERSKLVIEPSAAVGIAVAMQPAFR--ERGLERIGVVLCGGNLDLEALPDLLTG 322          
BLAST of mRNA_Ecto-sp13_S_contig6956.17964.1 vs. uniprot
Match: A0A2E3RP26_9BACT (Serine dehydratase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E3RP26_9BACT)

HSP 1 Score: 306 bits (783), Expect = 7.170e-98
Identity = 181/321 (56.39%), Postives = 224/321 (69.78%), Query Frame = 1
Query:   40 AVSIAGIRQAAARIGPHVHYTPVVTCRALDEMSGGREVFFKCELFQKTGSFKARGACNAVLLTPPEC--RDIVTHSSGNHAQALAWAASVKGVNAHIVMPHNSMAVKVAAVRDYGASITLCENTKSGRETTAAAVVSGHPLSTLIHPYNDPRVQCGQGTVGLELVQQVKAQTGGAGLDAVVVPVGGGGLITGVATAVKALCPGIRVIGAEPSKAADAFRSKQSGSLQGHDCEGMPDTIADGLRTTLGSTTWPVVRDSVDEIVTVSEEEIRLWMRVVYERMKLVIEPSAAVGVAAVMSPRVRGMPQDVKRVGVVLCGGNVDV 996
            A +I  I  A  RI PHV+ TPV TC  +D M+G R++ FKCE FQK G+FK RGACNAV+    +     +VTHSSGNHAQALA AA ++G+ AHIVMP N+  VK  AV  YGA I  CE     RETTAA V S    +T+I PYN P +  GQGT+ +EL++QV        LDA+VVPVGGGG++ GV  A KA+ PGIRV  AEP  A DAFRSKQSGS++  +    PDTIADGLRTTLG+ T+PV+RD V++++ VSE+EI   MR+V+ERMKLVIEPSA VG+AA +S R R +   +  VGVVLCGGNVD+
Sbjct:   10 AATIDDILGANRRIDPHVNRTPVHTCSTIDGMAG-RKLHFKCENFQKIGAFKFRGACNAVMKLEEDAARHGVVTHSSGNHAQALALAARIRGIPAHIVMPSNAPGVKRRAVEGYGAIIYECEPNVRSRETTAAEVAS-RTGATMIEPYNHPDIIAGQGTMSVELLEQVPH------LDALVVPVGGGGMLAGVTIAAKAIKPGIRVFAAEPEAADDAFRSKQSGSIEPME---NPDTIADGLRTTLGTLTFPVLRDLVEQVLPVSEQEIVSAMRLVWERMKLVIEPSAGVGIAAALSDRFRAI-DGMDHVGVVLCGGNVDL 318          
BLAST of mRNA_Ecto-sp13_S_contig6956.17964.1 vs. uniprot
Match: A0A3L7TMT6_9BACT (Pyridoxal-phosphate dependent enzyme n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7TMT6_9BACT)

HSP 1 Score: 301 bits (771), Expect = 4.290e-96
Identity = 177/321 (55.14%), Postives = 218/321 (67.91%), Query Frame = 1
Query:   40 AVSIAGIRQAAARIGPHVHYTPVVTCRALDEMSGGREVFFKCELFQKTGSFKARGACNAVLLTPPE--CRDIVTHSSGNHAQALAWAASVKGVNAHIVMPHNSMAVKVAAVRDYGASITLCENTKSGRETTAAAVVSGHPLSTLIHPYNDPRVQCGQGTVGLELVQQVKAQTGGAGLDAVVVPVGGGGLITGVATAVKALCPGIRVIGAEPSKAADAFRSKQSGSLQGHDCEGMPDTIADGLRTTLGSTTWPVVRDSVDEIVTVSEEEIRLWMRVVYERMKLVIEPSAAVGVAAVMSPRVRGMPQDVKRVGVVLCGGNVDV 996
            A S+A +R A  R+ P +H TPV+T   LD +SG R +FFKCE+FQ+TGSFK RGA NAV +       R +VTHSSGNHAQALA AAS++G+ AH+VMP NS  +K AAVR YGA I  C  T   RE TAA V+      ++I PYN   V  GQGT+ LEL++Q       A LDA++VP+GGGGLI+G+  A K + P IR+IGAEP+ A DA  SK+SGS+Q       P TIADGLR  LG  T+P+VRD VDEI  VSE+EIR  MR+V+ERMK+ IEPSAAVGVA         +PQ   RVGV+LCGGNVD+
Sbjct:   11 ATSLALVRAAQERVAPFIHRTPVLTSATLDRLSG-RSLFFKCEIFQRTGSFKFRGATNAVRMLDDATAARGVVTHSSGNHAQALALAASMRGIAAHVVMPSNSAEIKKAAVRGYGARIIECVPTLEAREATAARVLE-ETGGSMIPPYNHANVIAGQGTIALELLEQC------ADLDAIIVPLGGGGLISGITIAAKGINPKIRIIGAEPALAGDAALSKKSGSIQP---PMEPVTIADGLRAALGPLTFPIVRDLVDEIALVSEDEIRAHMRLVWERMKITIEPSAAVGVAVACXXGAAALPQ---RVGVILCGGNVDM 317          
BLAST of mRNA_Ecto-sp13_S_contig6956.17964.1 vs. uniprot
Match: A0A424KW82_9BACT (Pyridoxal-phosphate dependent enzyme n=1 Tax=Phycisphaera sp. TMED9 TaxID=1986611 RepID=A0A424KW82_9BACT)

HSP 1 Score: 301 bits (771), Expect = 4.580e-96
Identity = 183/335 (54.63%), Postives = 223/335 (66.57%), Query Frame = 1
Query:   22 PSAEPDAVSIAGIRQAAARIGPHVHYTPVVTCRALDEMSGGREVFFKCELFQKTGSFKARGACNAVL-LTPPECRD-IVTHSSGNHAQALAWAASVKGVNAHIVMPHNSMAVKVAAVRDYGASITLCENTKSGRETTAAAVVSGHPLSTLIHPYNDPRVQCGQGTVGLELVQQVKAQTGGAGLDAVVVPVGGGGLITGVATAVKALCPGIRVIGAEPSKAADAFRSKQSGSLQGHDCEGMPD-TIADGLRTTLGSTTWPVVRDSVDEIVTVSEEEIRLWMRVVYERMKLVIEPSAAVGVAAVMSPRVRGMPQDVKRVGVVLCGGNVDVTLLQDLL 1017
            P ++    ++  IR AA RI PHVH TPV+TC+A+DE++G  EVF KCE  QK G+FKARGA NAV  LT  E    +VTHSSGNHAQALAWAA  +G+ AHIVMP N+ AVK  AV  YG  +  CE T   R  T   V       T+I PY+D RV  GQGT+GLEL+ QV        LDA+VVPVGGGG+I G+A   KAL P + ++GAEP    DA RS+ SG ++ H   G P  TIADGLRTTLG  T+PV+R+ VD+I+TV E EIR  +R+V ER KLVIEPSAAVG+AA  SP  R      +R+GVVLCGGN+D+  L  LL
Sbjct:    2 PGSDSSRPNLDAIRTAARRIEPHVHRTPVLTCQAIDEVAGC-EVFLKCENLQKVGAFKARGASNAVFSLTDAEAEPGVVTHSSGNHAQALAWAAGRRGIPAHIVMPTNAPAVKKKAVLGYGGIVHDCEPTLESRLETCRKVAEDTG-GTVIPPYDDDRVIAGQGTIGLELLGQVPD------LDAIVVPVGGGGMIAGIAICAKALSPRLEILGAEPELVDDAARSRLSGRIEPH--AGDPTRTIADGLRTTLGKRTFPVIRELVDDIITVPETEIRQGLRLVMERAKLVIEPSAAVGIAATRSPAFRARGH--RRIGVVLCGGNLDLDALPSLL 324          
BLAST of mRNA_Ecto-sp13_S_contig6956.17964.1 vs. uniprot
Match: A0A6P8ITW0_ACTTE (L-serine ammonia-lyase n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8ITW0_ACTTE)

HSP 1 Score: 300 bits (767), Expect = 7.300e-95
Identity = 165/327 (50.46%), Postives = 229/327 (70.03%), Query Frame = 1
Query:   43 VSIAGIRQAAARIGPHVHYTPVVTCRALDEMSGGREVFFKCELFQKTGSFKARGACNAVLLTPPECRD-----IVTHSSGNHAQALAWAASVKGVNAHIVMPHNSMAVKVAAVRDYGASITLCENTKSGRETTAAAVVSGH-PLSTLIHPYNDPRVQCGQGTVGLELVQQVKAQTGGAGLDAVVVPVGGGGLITGVATAVKALCPGIRVIGAEPSKAADAFRSKQSGSLQGHDCEGMPDTIADGLRTTLGSTTWPVVRDSVDEIVTVSEEEIRLWMRVVYERMKLVIEPSAAVGVAAVMSPRVRGMPQDVKRVGVVLCGGNVDVTLL 1005
            V++  ++ A+ RI P ++ TPV+TC  LD+M+G + ++FKCE+FQK G+FK RGA NAVL     C +     +VTHSSGNH QALA AA VKG+ AHIVMP+N+ A+K AAV+DYGA+I  CE ++  RE  AA V+    P S L+ PY++  +  GQGT+ LEL++QV        LDA+VVPVGGGG+++G+  A K + P I++  AEP  A D  +S  +G        G P T+ADGL+T+LG  TWP++RD++D+++TV+E EI   MR+V+ERMKLVIEPSAAV VAAV+S R RG  ++V++V V+LCGGNV++  L
Sbjct:   46 VTLKDVQDASVRIAPFINRTPVMTCGTLDKMAG-KSLYFKCEIFQKVGAFKFRGAMNAVLNITENCSEAELPVVVTHSSGNHGQALALAAKVKGLKAHIVMPNNAPAIKKAAVKDYGANIVECEISQQDREAAAARVLKETGPNSYLVPPYDNKHIIAGQGTMALELLEQVPD------LDAIVVPVGGGGMLSGICVAAKGIKPSIKIFAAEPLLADDCAKSFAAGKRI--PLPGPPATVADGLKTSLGFITWPIIRDNIDDVITVTESEIISTMRLVWERMKLVIEPSAAVAVAAVLSERFRGENKNVEKVAVILCGGNVNLDSL 363          
BLAST of mRNA_Ecto-sp13_S_contig6956.17964.1 vs. uniprot
Match: A0A2E8JZL7_9PLAN (Serine dehydratase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8JZL7_9PLAN)

HSP 1 Score: 296 bits (758), Expect = 6.100e-94
Identity = 183/330 (55.45%), Postives = 221/330 (66.97%), Query Frame = 1
Query:   37 DAVSIAGIRQAAARIGPHVHYTPVVTCRALDEMSGGREVFFKCELFQKTGSFKARGACNAVLLTPPE--CRDIVTHSSGNHAQALAWAASVKGVNAHIVMPHNSMAVKVAAVRDYGASITLCENTKSGRETTAAAVVSGHPLSTLIHPYNDPRVQCGQGTVGLELVQQVKAQTGGAGLDAVVVPVGGGGLITGVATAVKALCPGIRVIGAEPSKAADAFRSKQSGSLQGHDCEGMP-DTIADGLRTTLGSTTWPVVRDSVDEIVTVSEEEIRLWMRVVYERMKLVIEPSAAVGVAAVMSPRVRGMPQDVKRVGVVLCGGNVDVTLLQDLL 1017
            D  +I  +R+A  RI P VH TPV+ C A++E +   EV  KCE  QK G+FKARGA NAVL    E   R +VTHSSGNHAQALAWAA  + V AHIVMP N+  VK  AV  YG  I  C+ T   R  T A V       T+I PY+D RV  GQGT+ LEL+ QV        L AVVVPVGGGG+I+GVAT +K L P I VIGAEP+ A DAFRSKQ+GS+Q H   G P  TIADGLRTTLG  T+P++RD VDEI+ V E EIR  +++V ER KLVIEPSAAVGVAA M P +R   +  +R+G+VLCGGN+D+  L +L+
Sbjct:    3 DHPTIEDVRKAMHRIEPFVHRTPVMRCHAIEERAEC-EVHLKCENLQKVGAFKARGAMNAVLSLDDETVARGVVTHSSGNHAQALAWAARERDVPAHIVMPTNAPEVKRRAVEGYGGIIHECKPTLESRLKTCAKVAE-KTGGTVIPPYDDDRVIAGQGTLALELIAQVPD------LQAVVVPVGGGGMISGVATVMKGLDPDIAVIGAEPALADDAFRSKQAGSIQPH--AGDPTQTIADGLRTTLGERTFPIIRDLVDEIIPVKEGEIRAALQLVLERAKLVIEPSAAVGVAAAMQPALR--ERGFERIGIVLCGGNLDLAALPELI 320          
BLAST of mRNA_Ecto-sp13_S_contig6956.17964.1 vs. uniprot
Match: A0A3L7R1F3_9BACT (Pyridoxal-phosphate dependent enzyme n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7R1F3_9BACT)

HSP 1 Score: 295 bits (754), Expect = 1.360e-93
Identity = 176/324 (54.32%), Postives = 219/324 (67.59%), Query Frame = 1
Query:   40 AVSIAGIRQAAARIGPHVHYTPVVTCRALDEMSGGREVFFKCELFQKTGSFKARGACNAVLLTPPE--CRDIVTHSSGNHAQALAWAASVKGVNAHIVMPHNSMAVKVAAVRDYGASITLCENTKSGRETTAAAVVSGHPLSTLIHPYNDPRVQCGQGTVGLELVQQVKAQTGGAGLDAVVVPVGGGGLITGVATAVKALCPGIRVIGAEPSKAADAFRSKQSGSLQGHDCEGMPDTIADGLRTTLGSTTWPVVRDSVDEIVTVSEEEIRLWMRVVYERMKLVIEPSAAVGVAAVMSPRVRGMPQDVKRVGVVLCGGNVDVTLL 1005
            A  +  IR A  RI P    TPV+T   LDE+SG R + FKCE+FQ+TGSFK RGA NA+ +   E   R +VTHSSGNHAQALA AA ++G++AH+VMP NS  +K  AVR YGA+I  CE T   RE+TAA V++     T+I P+N P V  GQGT+ LEL+ +         LD ++VP+GGGGLI+G+A A KAL P I++IGAEP  A DA  SK+ GS+Q       P TIADGLRT LG  T+PVVRD VDEIV VSE++I L MR+V+ERMK+ IEPSAAV VA   S  +R    D+  VGV+LCGGNVD+  L
Sbjct:    4 AADLDSIRAARRRIEPFALRTPVLTSATLDEISG-RRLAFKCEIFQRTGSFKFRGATNAIRMIDDESAARGVVTHSSGNHAQALALAARMRGISAHVVMPSNSAQIKKDAVRGYGATIIECEATLEARESTAARVLA-QTGGTMIPPFNHPNVIAGQGTIALELLDECPQ------LDCIIVPLGGGGLISGIAIAAKALKPSIKIIGAEPELAGDAAASKREGSIQP---AMTPLTIADGLRTALGPLTFPVVRDLVDEIVLVSEDDIALHMRLVWERMKITIEPSAAVAVAVACSAWMR-QQHDLADVGVILCGGNVDLAAL 315          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6956.17964.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJN0_ECTSI6.650e-23997.99Serine/Threonine Dehydratase n=2 Tax=Ectocarpus Ta... [more]
D7FHM2_ECTSI4.610e-16474.77Serine Racemase n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
A0A835Z2N3_9STRA1.550e-11152.38Serine/Threonine dehydratase n=1 Tax=Tribonema min... [more]
A0A2E3Q501_9BACT6.940e-9856.63Serine dehydratase n=1 Tax=Phycisphaerae bacterium... [more]
A0A2E3RP26_9BACT7.170e-9856.39Serine dehydratase n=1 Tax=Phycisphaerae bacterium... [more]
A0A3L7TMT6_9BACT4.290e-9655.14Pyridoxal-phosphate dependent enzyme n=1 Tax=Planc... [more]
A0A424KW82_9BACT4.580e-9654.63Pyridoxal-phosphate dependent enzyme n=1 Tax=Phyci... [more]
A0A6P8ITW0_ACTTE7.300e-9550.46L-serine ammonia-lyase n=1 Tax=Actinia tenebrosa T... [more]
A0A2E8JZL7_9PLAN6.100e-9455.45Serine dehydratase n=1 Tax=Planctomycetaceae bacte... [more]
A0A3L7R1F3_9BACT1.360e-9354.32Pyridoxal-phosphate dependent enzyme n=1 Tax=Planc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6956contigEcto-sp13_S_contig6956:2792..5589 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score669.1
Seed ortholog evalue1.1e-189
Seed eggNOG ortholog2880.D8LJN0
Model size1386
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.serine racemase
EggNOG OGsCOG1171@1,KOG1251@2759
Ec32 ortholog descriptionSerine/Threonine Dehydratase
Ec32 orthologEc-17_002680.1
Cds size1047
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6956.17964.1prot_Ecto-sp13_S_contig6956.17964.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6956 3131..5589 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463955.5279567-UTR-Ecto-sp13_S_contig6956:2791..31301681463955.5279567-UTR-Ecto-sp13_S_contig6956:2791..3130Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6956 2792..3130 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463955.5419788-CDS-Ecto-sp13_S_contig6956:3130..33801681463955.5419788-CDS-Ecto-sp13_S_contig6956:3130..3380Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6956 3131..3380 -
1681463955.5528233-CDS-Ecto-sp13_S_contig6956:3908..40061681463955.5528233-CDS-Ecto-sp13_S_contig6956:3908..4006Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6956 3909..4006 -
1681463955.5639164-CDS-Ecto-sp13_S_contig6956:4412..46111681463955.5639164-CDS-Ecto-sp13_S_contig6956:4412..4611Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6956 4413..4611 -
1681463955.574699-CDS-Ecto-sp13_S_contig6956:4793..50141681463955.574699-CDS-Ecto-sp13_S_contig6956:4793..5014Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6956 4794..5014 -
1681463955.5859876-CDS-Ecto-sp13_S_contig6956:5310..55891681463955.5859876-CDS-Ecto-sp13_S_contig6956:5310..5589Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6956 5311..5589 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6956.17964.1

>prot_Ecto-sp13_S_contig6956.17964.1 ID=prot_Ecto-sp13_S_contig6956.17964.1|Name=mRNA_Ecto-sp13_S_contig6956.17964.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=349bp
MEEASHEPSAEPDAVSIAGIRQAAARIGPHVHYTPVVTCRALDEMSGGRE
VFFKCELFQKTGSFKARGACNAVLLTPPECRDIVTHSSGNHAQALAWAAS
VKGVNAHIVMPHNSMAVKVAAVRDYGASITLCENTKSGRETTAAAVVSGH
PLSTLIHPYNDPRVQCGQGTVGLELVQQVKAQTGGAGLDAVVVPVGGGGL
ITGVATAVKALCPGIRVIGAEPSKAADAFRSKQSGSLQGHDCEGMPDTIA
DGLRTTLGSTTWPVVRDSVDEIVTVSEEEIRLWMRVVYERMKLVIEPSAA
VGVAAVMSPRVRGMPQDVKRVGVVLCGGNVDVTLLQDLLAGGGSPLPV*
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mRNA from alignment at Ecto-sp13_S_contig6956:2792..5589-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6956.17964.1 ID=mRNA_Ecto-sp13_S_contig6956.17964.1|Name=mRNA_Ecto-sp13_S_contig6956.17964.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2798bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6956:2792..5589- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAAGAGGCTTCTCATGAGCCCTCTGCGGAGCCGGACGCAGTATCCAT TGCCGGAATAAGGCAGGCAGCAGCCCGGATCGGACCGCATGTGCACTACA CGCCCGTCGTGACATGCCGCGCCCTTGATGAGATGAGCGGGGGCCGCGAG GTGTTCTTCAAGTGTGAGCTCTTCCAGAAGACGGGCTCCTTCAAGGCCCG TGGCGCTTGCAACGCGGTGCTGCTTACCCCGCCAGAGTGCCGCGACATCG TGACACACAGCAGCGGAAACCATGCCCAGGTATGCTGTAGGCTGCGCGTG GTGGCCCCCGCTACCGCTTGCGTTGCAGAGCTTGCATGTTTGACATATGC AGAGAGTATCGTGGTACGAGCTGTCACACGGCAGGTGTAGAGCACTCTAT AACTCAATAACGGTTGCTTGGTCATTGATTGAGCTTGTGCCAGCGCCCGA TGCGTGCGCGTGTTCGGTTCGATACGTGACTGCTGTCACACGCAACTCCA GGCAACCTCCACAACCGCAGTACGCACTAAAGAAGAGACGCCTCTCTTTT TGCCATCTCGACGAGATAACCACAGGCGCTCGCGTGGGCAGCCAGCGTGA AAGGAGTCAACGCTCACATCGTGATGCCGCACAACTCCATGGCCGTCAAA GTCGCCGCGGTCCGAGACTACGGCGCCAGCATCACCCTCTGCGAGAACAC GAAGAGCGGCAGAGAGACCACCGCGGCGGCCGTCGTATCTGGACACCCTC TGTCCACCCTTATACACCCTTACAATGACCCCAGGGTCCAGTGCGGGTAG GTGGGTTGGGGAGCTTGAAACACCCGATAGTCCGATGCGTGAACGCTGGT TGGCATTCCCCTTTACTGTGTATTGGAGTCAAGTCTGGATTGGTTGTTTT TGGCTGCCGCCTTGCCAGATGCCCCCCGCCCCCATCCTCTCTTTTTGAAC GCTCGCCTTTCTTTTTTTTATCCACTAGGCAAGGTACGGTTGGCCTGGAG CTAGTTCAGCAGGTGAAGGCACAGACGGGAGGCGCTGGTCTCGACGCGGT TGTGGTGCCCGTAGGCGGAGGAGGACTTATCACCGGGGTGGCGACAGCCG TCAAAGCCCTCTGCCCCGGTATTCGCGTTATCGGCGCGGAGCCGTCGAAG GCCGCAGACGCGTTTAGGTCTAAACAGGTACTACATTTGCGCGCTTTGGC CTGCCAGTCGGTGTCGCTCACTCTTTTTCCAGTGACGATGTCATCACATG GCCGAGATTGTGTCTGGCCGATTAACCGTGAACAACACCCACCGCTACCC AAAGGTGTTCCCCGTCATCTCTAAAATATACGCCGCAAGGTTTGTTACCA ATCAGATAGCATATGGAGTGCACGCCGACCGCCCTGTCACGGGCCTTTTC GTTTGTTTAGTCGATCCTGTGGGCCATGGTAGTTTTTCAGCAATTTCGTG CCGCGCTTGTGTATGCGAAGATTTCAACATTCCTACCGTGACCTACTGCT GCAGATGCCGCACCATCACTTTGAGACACCCCGAGTATGTAGAGCGACGG CATCTCGACGTTTCCTTTTGTCTTTTGGAACAGAGCGGCAGCTTGCAGGG ACACGACTGCGAGGGGATGCCAGACACGATTGCCGATGGTCTCCGTACGA CCCTTGGGAGCACGACGTGGCCAGTCGTCAGGTGCAGGAGTCCACTCGTA CTTGAAGCCGTGCCGCACCACAAATAATGTCCAATAACGCATTCAATGCG GATCTCGGACACACATCAACCACAGGCATTTAGTTCCAAACGCTAGCTCA GAAAAATCGATGGGCGATGCGGCAAGTTTTTTTCAATTGAGAGTTTTTTT CGTCCGTGATCCGGAAGGGTTCAGCAACGGCGTTTATCGACAGGTCGACT TCGAAGGGATAAACTCGAGTCCTAGGGTGTGTGGCCTCGATAGACTAGAC GGGGTGGGAAAACCACTGCATGCTCATATATTTCCTATGTCAATACGTAC TTCGAGGTCGTGCTGGGTGTCAACGGGTGTACCCTTAATGGGTGTATCCT CAATGGGTGTACCCTCAATGGGTGAACCCTCAATGGGAGCACCCTCGGTA CCCTTCCTTCACCGGCGTACCCCAGGTTTCTTGGAACAGTGGGGTCGCAC TCAAGAAAATTTGCTCTCGTCCTCACGACTTTCTTTCGGCATCTCCCGCA TTGCCACAGAGATTCGGTCGACGAGATAGTCACCGTGTCAGAGGAGGAGA TCCGGCTGTGGATGCGAGTGGTCTACGAGCGAATGAAGCTGGTCATCGAG CCGAGCGCCGCTGTCGGGGTGGCAGCGGTGATGTCGCCGCGAGTGCGAGG CATGCCTCAAGACGTGAAAAGAGTTGGGGTGGTGCTGTGCGGCGGCAACG TAGACGTGACACTGTTGCAAGACCTTTTGGCGGGAGGCGGTAGTCCCCTA CCGGTTTAGGTTTGCTTCCGCTCTTTCCCAACGCTTCGACCAAGCATGAT TTTGTCTGTTGTGGCAGGTTCATGACAAGTGAGCATTATTGTCGTTGCCA AGATGTCACCTCGACGTGTGGAACTTCAGCACTAGCGTAGCTTGTCGGCA TGAACCGTGGCCATAGGTGGAACGTCGCGTGCCTATTCCCTGTCAATAGT AGTAATCATGCTTCGGTAAGGGATGGACCCTGTGAAGCAAGATTTTTGAA CTTTTTTTGAGAACAGGAACAATAAACCCAGGGTTGTCGGTGATTGCATC TGTCGTGTAAAGTTCAAGGCGGTTCAAAGTAGAACAGCGCAGCCCGAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6956:2792..5589-

>mRNA_Ecto-sp13_S_contig6956.17964.1 ID=mRNA_Ecto-sp13_S_contig6956.17964.1|Name=mRNA_Ecto-sp13_S_contig6956.17964.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1047bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6956:2792..5589- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAAGAGGCTTCTCATGAGCCCTCTGCGGAGCCGGACGCAGTATCCAT
TGCCGGAATAAGGCAGGCAGCAGCCCGGATCGGACCGCATGTGCACTACA
CGCCCGTCGTGACATGCCGCGCCCTTGATGAGATGAGCGGGGGCCGCGAG
GTGTTCTTCAAGTGTGAGCTCTTCCAGAAGACGGGCTCCTTCAAGGCCCG
TGGCGCTTGCAACGCGGTGCTGCTTACCCCGCCAGAGTGCCGCGACATCG
TGACACACAGCAGCGGAAACCATGCCCAGGCGCTCGCGTGGGCAGCCAGC
GTGAAAGGAGTCAACGCTCACATCGTGATGCCGCACAACTCCATGGCCGT
CAAAGTCGCCGCGGTCCGAGACTACGGCGCCAGCATCACCCTCTGCGAGA
ACACGAAGAGCGGCAGAGAGACCACCGCGGCGGCCGTCGTATCTGGACAC
CCTCTGTCCACCCTTATACACCCTTACAATGACCCCAGGGTCCAGTGCGG
GCAAGGTACGGTTGGCCTGGAGCTAGTTCAGCAGGTGAAGGCACAGACGG
GAGGCGCTGGTCTCGACGCGGTTGTGGTGCCCGTAGGCGGAGGAGGACTT
ATCACCGGGGTGGCGACAGCCGTCAAAGCCCTCTGCCCCGGTATTCGCGT
TATCGGCGCGGAGCCGTCGAAGGCCGCAGACGCGTTTAGGTCTAAACAGA
GCGGCAGCTTGCAGGGACACGACTGCGAGGGGATGCCAGACACGATTGCC
GATGGTCTCCGTACGACCCTTGGGAGCACGACGTGGCCAGTCGTCAGAGA
TTCGGTCGACGAGATAGTCACCGTGTCAGAGGAGGAGATCCGGCTGTGGA
TGCGAGTGGTCTACGAGCGAATGAAGCTGGTCATCGAGCCGAGCGCCGCT
GTCGGGGTGGCAGCGGTGATGTCGCCGCGAGTGCGAGGCATGCCTCAAGA
CGTGAAAAGAGTTGGGGTGGTGCTGTGCGGCGGCAACGTAGACGTGACAC
TGTTGCAAGACCTTTTGGCGGGAGGCGGTAGTCCCCTACCGGTTTAG
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