mRNA_Ecto-sp13_S_contig6888.17860.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6888.17860.1 vs. uniprot
Match: D7G982_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G982_ECTSI) HSP 1 Score: 713 bits (1840), Expect = 5.440e-255 Identity = 372/422 (88.15%), Postives = 387/422 (91.71%), Query Frame = 2
Query: 62 AKGEECPLAAIFYAEFDDNEGGKILHQYPPEKFTRAHCKMLSSRIICEKDFCEKVSIVDSMAIPWTLASFPSSIGNEK-YKRNVLRFNVSFVFKKGHAQAPVVPYDRDPFIKVLERFGWWLREMELRFGYLKSGGEVNKVRLQELLERAYKGLKTDRRALLMLTGPGCTSLMPLLQPYVAATPLKDWRKIQDHDVPARRCPGLVESVSATASELAMDPDAVWGPEVDLVVQQVLPHINGVKHVKKISRDSQVVEIAAVKAALRWVLYTNQILLTDVFRYSNIYVQTTTTAEYTKRKDFRMACWERIAKPVVAASVADNVSSAGGDAEGI---PVSQQHEEVPNAGRGPTGGGWTLGDGTSSSTAATPRAAPAESEWGAVEGDGXXXXXXXXIEAETGTIPEAPHPACLRRLYGSFQCDRCVL 1315
A+GEECPLAAIFYAEFDDNEGGKILHQYPPEKFTR HCKMLSSRIIC+K+FCE+VS+VDSMAIPWTLASFPSSI +EK YKRN L FN+SFVFKKGHAQAPVVPYDRDPFIKVLERFG WLREMELRFGYLKSG +VNKVRLQELL RAYKGLKTDRRALLMLTGPGCTSLMPLLQPYVAATPLKDWRKIQDHDVPARRCPGLVESVSA ASELAMDPDAVWGPEVDLVVQQVLPH+NGVKHVKKISRDSQV EIAAVKAALRWVLYTNQI LTDVFRYSNIYVQTTTTAEYTKRKDFRMACWERIAKPVVAASVADNVSSAGGDAEG+ P SQQ T+G+GTSSSTAATPRAA ES+WGAVEGDG XXXXXXXIEAETGTIP+APHPACLRRLYGSFQCDR V+
Sbjct: 22 AEGEECPLAAIFYAEFDDNEGGKILHQYPPEKFTRTHCKMLSSRIICDKEFCERVSVVDSMAIPWTLASFPSSIKDEKLYKRNCLSFNISFVFKKGHAQAPVVPYDRDPFIKVLERFGRWLREMELRFGYLKSGKQVNKVRLQELLARAYKGLKTDRRALLMLTGPGCTSLMPLLQPYVAATPLKDWRKIQDHDVPARRCPGLVESVSAAASELAMDPDAVWGPEVDLVVQQVLPHVNGVKHVKKISRDSQV-EIAAVKAALRWVLYTNQISLTDVFRYSNIYVQTTTTAEYTKRKDFRMACWERIAKPVVAASVADNVSSAGGDAEGMYQGPASQQQXXXXXXXXXXXXXXLTVGNGTSSSTAATPRAALPESDWGAVEGDGAXXXXXXXIEAETGTIPDAPHPACLRRLYGSFQCDRSVM 442
BLAST of mRNA_Ecto-sp13_S_contig6888.17860.1 vs. uniprot
Match: A0A6H5JGD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGD3_9PHAE) HSP 1 Score: 194 bits (493), Expect = 6.020e-56 Identity = 108/123 (87.80%), Postives = 112/123 (91.06%), Query Frame = 2
Query: 956 MACWERIAKPVVAASVADNVSSAGGDAEGI---PVSQQHEEVPNAGRGPTGGGWTLGDGTSSSTAATPRAAPAESEWGAVEGDGXXXXXXXXIEAETGTIPEAPHPACLRRLYGSFQCDRCVL 1315
MACWERIAKPVVAASVADNVSSAGGDAEG+ P SQQ EE PNA RG GGGW +GDGTSSSTAATPRAAPAES+WGAVEGDGXXXXXXXXIEAETGTIPEAPHPACLRRLYGSFQCDR V+
Sbjct: 1 MACWERIAKPVVAASVADNVSSAGGDAEGMYLGPASQQQEEAPNAERGTAGGGWIVGDGTSSSTAATPRAAPAESDWGAVEGDGXXXXXXXXIEAETGTIPEAPHPACLRRLYGSFQCDRSVM 123
BLAST of mRNA_Ecto-sp13_S_contig6888.17860.1 vs. uniprot
Match: A0A2D4C9S3_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C9S3_PYTIN) HSP 1 Score: 113 bits (283), Expect = 3.590e-25 Identity = 89/294 (30.27%), Postives = 140/294 (47.62%), Query Frame = 2
Query: 83 LAAIFYAEFDDNEGGKILHQYPPEKFTRAHCKMLSSRIICEKDFCEKVSIVDSMAIPWTLASFPSSIGNEKYKRNVLRFNVSFVFKKGHAQAPVVPYDRDPFIKVLERFGWWLREMELRFGYLKSGGEVNKVRLQELLERAYKGLKTDRRALLMLTGPGCTSLMPLLQPYVAATPLKDWRKIQDHDVPARRCPGLVESVSATASELAMDPDAVWGPEVDLVVQQVLPHINGVKHVKKISRDSQVVEIAAVKAALRWVLYTNQILLTDVFRYSNIYVQTTTTAEYTKRKDFRMAC 964
+ +FY+EFD+ G +I+ Q P + +SS II +K C K+ V + + +P I ++KY RN L FN++FVF + H + PF +L + G + ME G+L +K L ++L + + L D + + +L L P L D + D+ VP V+ ++ +A W DL +QQ++P+I+GVK+VK+IS ++ V EIA VK LR +LY I +TD+F +SNIY K D R+ C
Sbjct: 2 IKGLFYSEFDNIAGPQIVFQAPAHVLSNEVFDSVSSYIIIDKALCNKIITVCVQGLQ--IVGYPVCIEDDKYHRNALLFNIAFVFDE-HVETT-------PFRPILRKLGALVESMEKESGFLSRDAGESKALLAQILPQILRDLTLDGECTIPVDAANVINLK--LFPT-----LGDPSPVFDYQVP----------VATRDLRQLLENNAEW----DLALQQIVPYIDGVKYVKRISIEADV-EIAIVKKCLRQLLYYGCITMTDIFLHSNIY------GHAAKPSDERLLC 257
BLAST of mRNA_Ecto-sp13_S_contig6888.17860.1 vs. uniprot
Match: A0A8K1CKR6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKR6_PYTOL) HSP 1 Score: 105 bits (261), Expect = 5.050e-21 Identity = 87/280 (31.07%), Postives = 135/280 (48.21%), Query Frame = 2
Query: 83 LAAIFYAEFDDNEGGKILHQYPPEKFTRAHCKMLSSRIICEKDFCEKVSIVDSMAIPWTLASFPSSIGNEKYKRNVLRFNVSFVFKKGHAQAPVVPYDRDPFIKVLERFGWWLREMELRFGYLKSGGEVNKVRLQELLERAYKGLKTDRRALLMLTGPGCTSL--MPLLQPYVAATPLKDWRKIQDHDVPARRCPGLVESVSATASELAMDPDAVWGPEVDLVVQQVLPHINGVKHVKKISRDSQVVEIAAVKAALRWVLYTNQILLTDVFRYSNIYVQT 916
L +FY+EFD+ G +I+ Q P + + +SS II +K C K+ V + I + +P I ++KY RN L FN++FVF +G A P +L + G + ME G+L G +K L+ +L + + L + + +L P LQ D + D+ VP V+ +D ++ W DL +QQ++P I+GVK+VK+IS ++ V EIA VK LR +LY I + D+F +SNIY T
Sbjct: 4 LKGVFYSEFDNIAGPQIVFQAPSDVLSSDVFDSVSSYIIIDKALCGKIITVCAQNIK--IVGYPVCIEDDKYHRNALLFNIAFVFDQGVDTASYRP--------ILRKLGALVESMERESGFLSRG--ESKALLEHILPQILRDLSFSGECTIPVDAANIINLKLFPTLQ---------DPSTVFDYQVP----------VAIRDLRQLLD-NSEW----DLALQQIVPFIDGVKYVKRISVEADV-EIAIVKKCLRQLLYYGCITMIDIFLHSNIYAIT 246
BLAST of mRNA_Ecto-sp13_S_contig6888.17860.1 vs. uniprot
Match: A0A5D6XVG5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVG5_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.320e-20 Identity = 83/280 (29.64%), Postives = 130/280 (46.43%), Query Frame = 2
Query: 83 LAAIFYAEFDDNEGGKILHQYPPEKFTRAHCKMLSSRIICEKDFCEKVSIVDSMAIPWTLASFPSSIGNEKYKRNVLRFNVSFVFKKGHAQAPVVPYDRDPFIKVLERFGWWLREMELRFGYLKSGGEVNKVRLQELLERAYKGLKTDRRALLMLTGPGCTSL--MPLLQPYVAATPLKDWRKIQDHDVPARRCPGLVESVSATASELAMDPDAVWGPEVDLVVQQVLPHINGVKHVKKISRDSQVVEIAAVKAALRWVLYTNQILLTDVFRYSNIYVQT 916
L +FY+EFD++ G +I+ Q PP + +SS II +K C K+ V + +P I ++KY RN L FN+ FVF + A P +L + G + ME G+L + +K L +L + L + + +L P LQ D + D+ VP V+ L ++ A W DL +QQ++P I+GV++VK+IS ++ V EIA VK +R +LY + + D+F +SNIY T
Sbjct: 2 LKGVFYSEFDNDAGPQIVFQAPPNLLSNEAFDSISSYIIIDKALCGKIITV--CVQQKKIVGYPVCIEDDKYHRNALLFNIGFVFDEHVDTAAYRP--------ILRKLGALMESMEKESGFLLNS--TSKALLAHILPQILSDLLLTGECTIPVNAANTINLKLFPKLQ---------DPSPVFDYQVP----------VAIRDLRLLLENSAEW----DLALQQIVPFIDGVRYVKRISLEADV-EIAIVKKCVRQLLYYGCVAMVDIFLHSNIYTVT 245
BLAST of mRNA_Ecto-sp13_S_contig6888.17860.1 vs. uniprot
Match: K3WCL8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WCL8_GLOUD) HSP 1 Score: 102 bits (255), Expect = 3.410e-20 Identity = 83/280 (29.64%), Postives = 131/280 (46.79%), Query Frame = 2
Query: 83 LAAIFYAEFDDNEGGKILHQYPPEKFTRAHCKMLSSRIICEKDFCEKVSIVDSMAIPWTLASFPSSIGNEKYKRNVLRFNVSFVFKKGHAQAPVVPYDRDPFIKVLERFGWWLREMELRFGYLKSGGEVNKVRLQELLERAYKGLKTDRRALLMLTGPGCTSL--MPLLQPYVAATPLKDWRKIQDHDVPARRCPGLVESVSATASELAMDPDAVWGPEVDLVVQQVLPHINGVKHVKKISRDSQVVEIAAVKAALRWVLYTNQILLTDVFRYSNIYVQT 916
+ +FYAEFD+ G +I+ Q P + +S II +K C K I+ + + +P I ++KY RN L FN+ FVF + A P +L + G + ME G+L G +K L+ +L + L + + + +L P LQ D ++ D+ VP V+ L ++ A W DL +QQ++P I+GVK+VK+IS ++ V EIA VK +R +LY + + D+F +SNIY T
Sbjct: 2 IKGVFYAEFDNVAGPQIVFQAPYNVLSNEVFDSVSGYIIIDKALCGK--IITGSVMQMKIVGYPVCIEDDKYHRNALLFNIGFVFDEHVDTAAYRP--------ILRKLGALMESMEKESGFLHVG--ESKALLEHILPQILHDLTLNGECTIPVNTANVINLKLFPKLQ---------DPSQVFDYQVP----------VAIRDLRLLLENSAEW----DLALQQIVPFIDGVKYVKRISLEADV-EIAIVKKCVRQLLYYGCVTMIDIFLHSNIYAIT 245
BLAST of mRNA_Ecto-sp13_S_contig6888.17860.1 vs. uniprot
Match: A0A484E8W7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E8W7_BRELC) HSP 1 Score: 102 bits (255), Expect = 4.550e-20 Identity = 85/311 (27.33%), Postives = 140/311 (45.02%), Query Frame = 2
Query: 83 LAAIFYAEFDDNEGGKILHQYP---PEKFTRAHCKMLSSRIICEKDFCEKVSIVDSMAIPWTLASFPSSIGNEKYKRNVLRFNVSFVFKKGHAQAPVVPYDRDPFIKVLERFGWWLREMELRFGYLKSGGEVNKVRLQELLERAYKGLKTDRRALLMLTGPGCTSL--MPLLQP------YVAATPLKDWRKIQDHDVPARRCPGLVESVSATASELAMDPDAVWGPEVDLVVQQVLPHINGVKHVKKISRDSQVVEIAAVKAALRWVLYTNQILLTDVFRYSNIYVQTTTTAEYTKRKDFRMACWERIAK 982
+ +FY+EFD+ G IL Q P P + +S II +K C K+ V + + + +P I ++KY RN L FN+ FVF + AP P +L + G + ME G+L + + K L+ +L + + L + + +L P LQ Y P+ D R + +++ E DL +QQ++P+I+GV+++K+IS ++ V EIA VK +R +LY N + L D+F +SNIY TT A++ + + C + K
Sbjct: 2 IKGLFYSEFDNVAGPVILFQAPEKYPYVLSNEVFDSVSGYIIIDKALCGKIITVRAQQMK--IVGYPVCIEDDKYHRNALLFNIGFVFNEYVETAPYRP--------ILRKLGALVEGMEKESGFLYNADK--KELLKTILPQILRDLTLHGECTIPVDAANIINLKLFPTLQDPAPVYEYQVPVPILDIRTLFENN------------------------------EWDLALQQIVPYIDGVRYIKRISLEADV-EIAIVKKCIRQLLYYNCVTLIDIFLHSNIYANTTKIAQFATDSNLQAECGAYVVK 269
BLAST of mRNA_Ecto-sp13_S_contig6888.17860.1 vs. uniprot
Match: A0A485KK46_9STRA (Aste57867_8387 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KK46_9STRA) HSP 1 Score: 102 bits (253), Expect = 5.610e-20 Identity = 84/294 (28.57%), Postives = 132/294 (44.90%), Query Frame = 2
Query: 83 LAAIFYAEFDDNEGGKILHQYPPEKFTRAHCKMLSSRIICEKDFCEKVSIVDSMAIPWTLASFPSSIGNEKYKRNVLRFNVSFVFKKGHAQAPVVPYDRDPFIKVLERFGWWLREMELRFGYLKSGGEVNKVRLQELLERAYKGLKTDRRALLMLTGPGCTSLMPLLQPYVAATPLKDWRKIQDHDVPARRCPGLVESVSATASELAMDPDAVWGPEVDLVVQQVLPHINGVKHVKKISRDSQVVEIAAVKAALRWVLYTNQILLTDVFRYSNIYVQTTTTAEYTKRKDFRMAC 964
+ IFY+EFD+ G +I++Q PP + +S II +K C K+ V I + +P I ++KY RN L FN+ FVF H A VPY +L + G + ME +L E K L +L L + + + +L K + K+ P C V ++L + E DL +Q+++PHI+G+ +VK+IS ++V EI+ VK LR +LY I + D+F +SN+Y T+ E+ + AC
Sbjct: 2 IQGIFYSEFDNIAGPQIVYQAPPNALSNEVFDSVSGYIIIDKALCGKIITVCPQDIK--IVGYPVCIEDDKYHRNALLFNIGFVF---HKDADAVPYK-----PILRKLGALMESMEKELCFLSK--ETTKATLATILPSILHDLTLYGESTITIDTSNIINL-------------KVFHKLPP---PPNVCDFQVPVAIRDLNDLLKN-----SVEWDLALQKIVPHIDGINYVKRISIVAEV-EISIVKNCLRQLLYYGCITMIDIFLHSNMYSTTSKIYEFFNDPSLQQAC 261
BLAST of mRNA_Ecto-sp13_S_contig6888.17860.1 vs. uniprot
Match: A0A835Z1V6_9STRA (Nitrogen permease regulator 2-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1V6_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.800e-19 Identity = 100/369 (27.10%), Postives = 151/369 (40.92%), Query Frame = 2
Query: 83 LAAIFYAEFDDNEGGKILHQ-----YPPEKFTRAHCKMLSSRIICEKDFCEKVSIVDSMAIPWTLASFPSSIGNEK--------------YKRNVLRFNVSFVFKKGHAQAPVVPYDRDPFIKVLERFGWWLREMELRFGYLKSGGEVNKVRLQELLERAYKGLKTDRRALLMLTG--------PGCTSLMPLLQ-PYVAATPLKDWRKIQDHDVPARRCPGLVESVSATASELAMDPDA-------------------VWGPEVDLVVQQVLPHINGVKHV-----------------------KKISRDSQVVEIAAVKAALRWVLYTNQILLTDVFRYSNIYVQTTTTAEYTKRKDFRMACWERIA 979
L +FY+EFD+ G KIL Q PPEKF M++ R +C K I+ A + +P SI +EK Y RN L FNV FVF++G D + + L + L ME+ +L K RL E+L + L + +ML G P C+ + LL P + + + C L++ + + +L P A + + DL +QQV+P I+GVK+ KKIS D++V +I VK LR ++Y + L D+F+YSN+Y+ T E+++R D + C E IA
Sbjct: 7 LLGVFYSEFDNIAGPKILFQSPEGLLPPEKFDGISDYMITGRQLCGK-------IITVSAHGLKIMGYPLSIADEKDESDANVLACFSAQYNRNALLFNVGFVFEEG--------IDAEHYHNALRKLSMMLYSMEVESAFLFDA--QRKARLAEILPQVRDDLNSRGECTVMLDGTIPSAASSPHCSVALVLLHTPAIGSGSGSGGGILLMSTAAPGECTVLLDDANLLSLKLFWTPPANAVDVAEHQVPVLLQDRGLLLSVDCDLALQQVIPQIDGVKYAIKSACAYFLLAPXXXXXXXXXXXKKISLDAEV-DIGIVKRCLRALVYYKCVALIDIFQYSNVYISTAKVHEFSRRADQQRQCAEFIA 357
BLAST of mRNA_Ecto-sp13_S_contig6888.17860.1 vs. uniprot
Match: A0A024GF53_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GF53_9STRA) HSP 1 Score: 100 bits (248), Expect = 3.590e-19 Identity = 73/272 (26.84%), Postives = 131/272 (48.16%), Query Frame = 2
Query: 92 IFYAEFDDNEGGKILHQYPPEKFTRAHCKMLSSRIICEKDFCEKVSIVDSMAIPWTLASFPSSIGNEKYKRNVLRFNVSFVFKKGHAQAPVVPYDRDPFIKVLERFGWWLREMELRFGYLKSGGEVNKVRLQELLERAYKGLKTDRRALLMLTGPGCTSLMPLLQPYVAATPLKDWRKIQDHDVPARRCPGLVESVSATASELAMDPDAVWGPEVDLVVQQVLPHINGVKHVKKISRDSQVVEIAAVKAALRWVLYTNQILLTDVFRYSNIY 907
+ Y+EFD++ G +I+ Q P + + +S II +K C K+ V ++ T+ +P I ++KY RN L FN+ FV +KG + + P +L +FG L ME G+L + E K L ++L + L ++ + +L Q +V + + ++ VP C V+ D A W DL +QQ++P ++G+K +++IS ++ + E+ VK + +++ N + L D+F Y+NIY
Sbjct: 5 VVYSEFDNDAGPQIVFQAPENVLSNEVFESISCYIIIDKPLCGKIITVSVQSV--TVIGYPVCIEDDKYHRNALLFNIGFVAEKGAQLSALCP--------LLRKFGSLLEMMERESGFLYN--ESTKALLPKILPQMLHDLIVQDECIISIDKANILNLKLFPQNFVIP------QDVCEYHVPVPLCDLRVKC----------DTCAEW----DLAIQQLVPFLDGIKSIRRISMEANM-EVQLVKKCVAQLIFFNYVQLIDIFAYTNIY 243 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6888.17860.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6888.17860.1 >prot_Ecto-sp13_S_contig6888.17860.1 ID=prot_Ecto-sp13_S_contig6888.17860.1|Name=mRNA_Ecto-sp13_S_contig6888.17860.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=439bp GNGGIGSNGGDKCGGKCGERGEGGRMPPGGHLLRRVRRQRGRQDPSPVPAback to top mRNA from alignment at Ecto-sp13_S_contig6888:114..7601+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6888.17860.1 ID=mRNA_Ecto-sp13_S_contig6888.17860.1|Name=mRNA_Ecto-sp13_S_contig6888.17860.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7488bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6888:114..7601+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6888:114..7601+ >mRNA_Ecto-sp13_S_contig6888.17860.1 ID=mRNA_Ecto-sp13_S_contig6888.17860.1|Name=mRNA_Ecto-sp13_S_contig6888.17860.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1317bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6888:114..7601+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |