mRNA_Ecto-sp13_S_contig6859.17822.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6859.17822.1
Unique NamemRNA_Ecto-sp13_S_contig6859.17822.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6859.17822.1 vs. uniprot
Match: D7FTE0_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTE0_ECTSI)

HSP 1 Score: 440 bits (1132), Expect = 5.540e-140
Identity = 267/516 (51.74%), Postives = 330/516 (63.95%), Query Frame = 1
Query:  418 QDKSESYLSFAVNIVTKLRPEDVPKEFGLMLVITNKMRVTLHIAHHRVIGDYLSACCNNVVELPQ---AQNVVTQREVCSMVLAADRRMSQAFVADMTSAKVFQ--------NLENREPGLRGEFHREPEGGGVMQEGDDQVWCAGTEGVACEKEELANLVHREPDVPPPGAAMKRLIREALPDLTSVAKTLDRSNTCSGVAGLLFHGNVSYMQAIAGDQSESLESLDACVDVVLRYPGITRFRPHMVHCMLAAGHFFNRRDMYDAMRRVYNSILPMGCSQAPPYEEWRSVSQICGDILCRSLEAQALQPRDEEGPWQSNPAADGLAPYGLLSGLMESPYHGVETRSSGSPP-----------APATATGVSAVPSVLPETPHARRRVSQNVVGDDFAAADAAGDMRRKPGLAA--MLIPESACSEEASEACGVRQ-NWSRPAAPGQHLRSGGDTVAENAAAXXXXXXXXXXXXXXHTHTVEPVEEDVELWGREITLTDADLMDAAAVFARDEGLL 1890
            +DK+E Y+SFAVNIV+KLRPEDVPKE GLML+ T+K+RV+   A +   GD LS  C+  +ELPQ   AQ+ +T  +V ++ L AD  +SQAF+ADMTSA            + E  EP L GE +RE  GGGVM+EG  QV  AG   VAC+ EELAN  HREPDVPP G AMKR  REALP++TS+AKTL+ S+TCSGV G+L+HGNV+YM+AIAGD  +S ESL ACVDVVLRYPG+ RFR H++HCMLAA HFFNRRDMYDAMR VYNS+ PMG  Q PPYEEWR++ Q+C  ++CRS+EA+ LQ R  EGP Q+N  ++         G M SP  G +++SSG+PP           AP TATG +AV S LP+TPH      Q+V G+D AA    GDM  + GL A  M IPE   S +  EA GVR   WSR AA G+ +RS     A  +                          +V   G E+ +TDADL+D AA FA DEGLL
Sbjct:  316 EDKNERYMSFAVNIVSKLRPEDVPKELGLMLMTTDKLRVS---ACNPQPGDDLSTSCDEALELPQVREAQHPLTPTDVTNVFLVADGLLSQAFIADMTSAGAIPASGGGAAPHEEKGEPVL-GESYRELGGGGVMEEGGKQVRSAG---VACDDEELANRSHREPDVPPTGPAMKRFAREALPEMTSLAKTLESSDTCSGVGGVLYHGNVAYMRAIAGDLDKSFESLQACVDVVLRYPGLVRFRSHLIHCMLAASHFFNRRDMYDAMRGVYNSVGPMGYPQIPPYEEWRTIRQVCPHVMCRSMEAERLQ-RYGEGPVQTNAPSEEPVTSEPSPGSMTSPLSGADSQSSGAPPEGLASEEQGSLAPTTATGATAVSSPLPDTPHTSATFVQDVDGNDGAAT---GDMPLQRGLVATAMPIPELVYSAK-GEAGGVRHAGWSRAAATGEQVRSSTTAPAPGSPKIGFKWWGG----------------EVVSGGAEMNMTDADLLDIAAAFANDEGLL 803          
BLAST of mRNA_Ecto-sp13_S_contig6859.17822.1 vs. uniprot
Match: D7FTD9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD9_ECTSI)

HSP 1 Score: 428 bits (1100), Expect = 6.060e-138
Identity = 262/515 (50.87%), Postives = 328/515 (63.69%), Query Frame = 1
Query:  421 DKSESYLSFAVNIVTKLRPEDVPKEFGLMLVITNKMRVTLHIAHHRVIGDYLSACCNNVVELP---QAQNVVTQREVCSMVLAADRRMSQAFVADMTSAKVFQ--------NLENREPGLRGEFHREPEGGGVMQEGDDQVWCAGTEGVACEKEELANLVHREPDVPPPGAAMKRLIREALPDLTSVAKTLDRSNTCSGVAGLLFHGNVSYMQAIAGDQSESLESLDACVDVVLRYPGITRFRPHMVHCMLAAGHFFNRRDMYDAMRRVYNSILPMGCSQAPPYEEWRSVSQICGDILCRSLEAQALQPRDEEGPWQSNPAADGLAPYGLLSGLMESPYHGVETRSSGSPPA-----------PATATGVSAVPSVLPETPHARRRVSQNVVGDDFAAADAAGDMRRKPGLAA--MLIPESACSEEASEACGVRQ-NWSRPAAPGQHLRSGGDTVAENAAAXXXXXXXXXXXXXXHTHTVEPVEEDVELWGREITLTDADLMDAAAVFARDEGLL 1890
            DK+E YLSFAVNIV+KLRPEDVPKE GLML+ T+K+RV+     ++  GD LS  C   VELP   +AQ+++T  +V +  LAAD  +++AFVADM SA            + EN EP L G+ +RE  GGGVM+EG  ++W A    VA E EEL N VHREPDVPP G+AMK LIREALP++ S+AKTL+ S+TCSG  G+L+HGNV+YM+AIAGD  ++ ESL ACVDVVLRYPG+ RFR H++HCMLAA HFFNRRDMYDAMR VYNS+ PMG  Q PPYEEWR++ Q+C  +LCRS+EA+ LQ  DE GP Q+  A++         G ++S   G +++SSGSPPA           P TATG +AV S LP+TPH      Q+V G+D AA    GDM  + GL A  M IPES  S +  +  GVR   WSR AA G+H RS     A  +                          +V   G E+ +TDADL+D AA FA DEGLL
Sbjct:  100 DKNERYLSFAVNIVSKLRPEDVPKELGLMLMTTDKLRVS---PCNQPPGDDLSTSCGEAVELPRVREAQHLLTPTDVSNAFLAADSLITRAFVADMMSAGAIPASGGGAAPHEENGEPVL-GKSYRELGGGGVMEEGRKRMWNAD---VAWEDEELGNQVHREPDVPPAGSAMKLLIREALPEMASLAKTLESSDTCSGAGGVLYHGNVAYMRAIAGDLDKAFESLQACVDVVLRYPGLVRFRSHLIHCMLAASHFFNRRDMYDAMRGVYNSVGPMGYPQIPPYEEWRTIRQVCPHVLCRSMEAEILQHLDE-GPGQTTNASEEPVTSEPSPGSIKSFRSGADSQSSGSPPAGLASEEQGSLAPTTATGATAVSSPLPDTPHTLATFVQDVDGNDGAAT---GDMPLQRGLVATAMPIPESVYSAK-GDTGGVRHAGWSRAAATGEHPRSSTAAPAPGSPKIGFEWWGG----------------EVVSGGAEMNMTDADLLDIAAAFANDEGLL 586          
BLAST of mRNA_Ecto-sp13_S_contig6859.17822.1 vs. uniprot
Match: D7FTD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD6_ECTSI)

HSP 1 Score: 414 bits (1063), Expect = 1.010e-133
Identity = 241/497 (48.49%), Postives = 309/497 (62.17%), Query Frame = 1
Query:  451 VNIVTKLRPEDVPKEFGLMLVITNKMRVTLHIAHHRVIGDYLSACCNNVVELPQAQNVVTQREVCSMVLAADRRMSQAFVADMTSAKVF-------QNLENREPGLRGEFHREPEGGGVMQEGDDQVWCAGTEGVACEKEELANLVHREPDVPPPGAAMKRLIREALPDLTSVAKTLDRSNTCSGVAGLLFHGNVSYMQAIAGDQSESLESLDACVDVVLRYPGITRFRPHMVHCMLAAGHFFNRRDMYDAMRRVYNSILPMGCSQAPPYEEWRSVSQICGDILCRSLEAQALQPRDEEGPWQSNPAADGLAPYGLLSGLMESPYHGVETRSSGSPPAPA--------TATGVSAVPSVLPETPHARRRVSQNVVGDDFAAADAAGDMRRKP-GLAAMLIPESACSEEASEACGVRQNWSRPAA-PGQHLRSGGDTVAENAAAXXXXXXXXXXXXXXHTHTVEPVEEDVELWGREITLTDADLMDAAAVFARDEGLL 1890
            +NIV++L PE  PKE G ML+ T KMR+   +   RV  D L+A CNNVVELP+ +NVV + ++C ++L ADRR++QAFVADMTS+          Q  EN EP ++GE HRE  G G+++E  ++V   GT G A +  EL + +H EP+VPP GAAMKR ++E LP++T + KTL+RSN CSGV GL +H NV+YM+ + GD  + ++ L A  D+VLRYPGI RFRPH +HC LA  HF  RRDMYDAM  VYNSI P GC +APPYEEWR+++QIC ++ CRS EA+  +    EG  Q+N + +     G  SG M+SP  G E ++ GS PA          T T  +AVPS LPE  HA   +S++ V +    AD A D RR+P    AMLIPES  S EA+EA GVR  WS  AA PGQ   S G+  A  AAA                   E    D+ L G E+ LTD DL+DAAAVFA DEGLL
Sbjct:    1 MNIVSQLGPEKAPKELGAMLLTTEKMRLFKKMGCSRVRTDDLTAYCNNVVELPRVENVVMKNDLCHLLLVADRRLNQAFVADMTSSGTLAAVRGAAQRKENEEP-VQGESHREWGGSGMVEENGERVRGKGTRGPASDDNELVDSLHDEPEVPPSGAAMKRFVQETLPEMTRLTKTLERSNVCSGVGGLFYHSNVAYMKTVNGDVEDLIKCLQASADIVLRYPGIVRFRPHFIHCTLAVSHFSKRRDMYDAMNGVYNSIRPPGCWRAPPYEEWRTITQICDNMFCRSFEAEIHKAHHGEGLMQTNVSDNEDVTSGPASGSMKSPCIGAERQNGGSLPAELCQRLPVSMTPTDATAVPSPLPEPRHAPPSLSEDGVRNGDTGADDARDRRRQPVAETAMLIPESVFSAEAAEAGGVRAGWSSAAAGPGQQFCSEGNNGAGGAAAAAVARNPKVGP--------EVWGGDMALGGSEMALTDEDLLDAAAVFASDEGLL 488          
BLAST of mRNA_Ecto-sp13_S_contig6859.17822.1 vs. uniprot
Match: A0A6H5L0W7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0W7_9PHAE)

HSP 1 Score: 419 bits (1077), Expect = 9.380e-132
Identity = 265/526 (50.38%), Postives = 325/526 (61.79%), Query Frame = 1
Query:  415 VQDKSESYLSFAVNIVTKLRPEDVPKEFGLMLVITNKMRVTLHIAHHRVIGDYLSACCNNVVELP---QAQNVVTQREVCSMVLAADRRMSQAFVADMTSAKVFQ--------NLENREPGLRGEFHREPEGGGVMQEGDDQVWCAGTEGVACEKEELANLVHREPDVPPPGAAMKRLIREALPDLTSVAKTLDRSNTCSGVAGLLFHGNVSYMQAIAGDQSESLESLDACVDVVLRYPGITRFRPHMVHCMLAAGHFFNRRDMYDAMRRVYNSILPMGCSQAPPYEEWRSVSQICGDILCRSLEAQALQPRDEEGPWQSNPAADGLAPYGLLSGLMESPYHGVETRSSGSPPA-------------PATATGVSAVPSVLPETPHARRRVSQNVVGDDFAAADAAGDMRRKPGLAAM--LIPESACSEEASEACGVRQ-NWSRPAAPGQHLRSGGDTVAENAAAXXXXXXXXXXXXXXHTHTVEPVEEDVELWG-------REITLTDADLMDAAAVFARDEGLL 1890
            + DK+E YLSFAVNIV+KLRPEDVPKE GLMLV TNK+RV      +   GD LS  C+  VELP   +AQ+ +T  +V +  LAAD  +++AFVADM SA            + EN EP L G + RE  GGGVM+EG  + W AG   V  E EELAN VHREPDVPP G AMK LI+EALP++TS+AKTL+ S+TCSGV G+L+HGNV+YM+A+AG+  ++ ESL+ACVDVVLRYPG+ RF+ H++HCMLAA HFFNRRDMYDAM+RVYNS+ PMG  QAPPYEEWR++ Q+C  ILCRSLE +  Q  DE G  Q+N A         LSGL  S   G +++SSG PPA               TATGV+AV S LP  PH       +  G+D A+A   GDM  +PGL A   LIPES  S +  EA  VR  +W   AA G+  RSG    A  +                           +E WG        E+ +TDADL+D AAVFA DEGLL
Sbjct:  318 IDDKNERYLSFAVNIVSKLRPEDVPKELGLMLVTTNKLRVC---PCNPQPGDDLSTSCDEAVELPRVREAQHPLTPTDVSNAFLAADSLITRAFVADMMSAGAITASGGGAAPHEENGEPVLGGSY-RELGGGGVMEEGGKREWNAG---VTWEGEELANRVHREPDVPPAGPAMKLLIQEALPEMTSLAKTLESSDTCSGVGGVLYHGNVAYMRAVAGELVKAFESLEACVDVVLRYPGLVRFKSHLIHCMLAASHFFNRRDMYDAMKRVYNSVGPMGYPQAPPYEEWRTIRQVCPHILCRSLEVELHQHLDE-GLVQANAAPKDPETSEPLSGLFNSTLSGSDSQSSGPPPAGLAXXXXXXXXXXXXTATGVTAVSSPLPAPPHTFPTFMPDGGGNDGASA---GDMPLQPGLVATATLIPESVYSAK-GEAGDVRHADWLHAAATGERPRSGTGARAPGSPKIG-----------------------LEWWGGDVVSGEAEMNMTDADLLDIAAVFANDEGLL 808          
BLAST of mRNA_Ecto-sp13_S_contig6859.17822.1 vs. uniprot
Match: A0A6H5L0K0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K0_9PHAE)

HSP 1 Score: 373 bits (958), Expect = 5.730e-114
Identity = 255/550 (46.36%), Postives = 318/550 (57.82%), Query Frame = 1
Query:  424 KSESYLSFAVNIVTKLRPEDVPKEFGLMLVITNKMRVTLHIAHHRVIGDYLSACCNNVVELPQ---AQNVVTQREVCSMVLAADRRMSQAFVADMTSAKVFQ--------NLENREPGLRGEFHREPEGGGVMQEGDDQVWCAGTEGVACEKEELANLVHREPDVPPPGAAMKRLIREALPDLTSVAKTLDRSNTCSGVAGLLFH---GNVSYMQAIAGDQSESLESLDACVDVVLRYPGITRFR--PHMVHCMLAAGHFFNRRDMYDAMRRVYNSILPMGCSQAPPYEEWRSVSQICGDILC-------------------------------RSLEAQALQPRDEEGPWQSNPAADGLAPYGLLSGLMESPYHGVETRSSGSPP-----------APATATGVSAVPSVLPETPHARRRVSQNVVGDDFAAADAAGDMRRKPGLAA--MLIPESACSEEASEACGVRQ-NWSRPAAPGQHLRSGGDTVAENAAAXXXXXXXXXXXXXXHTHTVEPVEEDVELWGREITLTDADLMDAAAVFARDEGLL 1890
            K+E Y+S AVNI +KLRPEDVPKE  LML+ T+ +RV+   A +   GD LS  C+  +ELPQ   AQ+ +T  +V ++ LAAD  +SQAFVADMTSA            + EN EP L G+ +RE  GGGVM+EG  QV  AG   VAC+ EELAN +HREPDVPP G AMKR  REALP++TS+AKTL+R       A ++F     NV+YM+A+AG+  ++ ESL+ACVDVVLRYPG+ RFR   H++HCMLAA HFFNRRDMYDAMR VYNS+ PMG  Q PPYEEWR++ Q+C  ILC                               RS+E + LQ R  EGP Q+N A++ L     LSG + SP  G +T+SSG+PP           AP  A G +AV S LPE  H       +   +D AAA    DM  +PGL A  M IPE   S +  EA GVR+ +WS  AA G   RSG    A ++                          DV     E+ +TDADL+D AAVFA DEGLL
Sbjct:  314 KNERYMSLAVNIASKLRPEDVPKELWLMLMTTDNLRVS---ACNPQPGDDLSTSCDEALELPQVREAQHPLTPTDVSNVFLAADSLLSQAFVADMTSAGAITASGRGAAPHEENGEPAL-GDSYRELGGGGVMEEGGKQVRSAG---VACDDEELANRLHREPDVPPTGPAMKRFAREALPEMTSLAKTLERFVPTRARASVVFSITGDNVAYMRAVAGELVKAFESLEACVDVVLRYPGLVRFRRTSHLIHCMLAASHFFNRRDMYDAMRGVYNSVGPMGYPQVPPYEEWRTIRQVCPHILCSFRTDLLPPRCSNVFGVFRRIRPHSFVAPVKRSMEVERLQ-RYGEGPVQTNAASEELVMSEALSGSITSPLSGADTKSSGAPPGGLASEEQGSLAPTRAIGGTAVSSPLPEFSHTLATFVPDGGRNDDAAAR---DMPLQPGLVATAMPIPEPVYSAK-GEAGGVRRADWSGAAATGGQPRSGTGARAPDSPKIGFEWWGG----------------DVVSGEAEMNMTDADLLDIAAVFANDEGLL 835          
BLAST of mRNA_Ecto-sp13_S_contig6859.17822.1 vs. uniprot
Match: A0A6H5KT43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT43_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 9.840e-43
Identity = 102/187 (54.55%), Postives = 127/187 (67.91%), Query Frame = 1
Query:  439 LSFAVNIVTKLRPEDVPKEFGLMLVITNKMRVTLHIAHHRVIGDYLSACCNNVVELPQ---AQNVVTQREVCSMVLAADRRMSQAFVADMTSAKVFQ--------NLENREPGLRGEFHREPEGGGVMQEGDDQVWCAGTEGVACEKEELANLVHREPDVPPPGAAMKRLIREALPDLTSVAKTLDR 966
            +S AVNI +KLRPEDVPKE  LML+ T+ +RV+   A +   GD LS  C+  +ELPQ   AQ+ +T  +V ++ LAAD  +SQAFVADMTSA            + EN EP L G+ +RE  GGGVM+EG  QV  AG   VAC+ EELAN +HREPDVPP G AMKR  REALP++TS+AKTL+R
Sbjct:    1 MSLAVNIASKLRPEDVPKELWLMLMTTDNLRVS---ACNPQPGDDLSTSCDEALELPQVREAQHPLTPTDVSNVFLAADSLLSQAFVADMTSAGAITASGRGAAPHEENGEPAL-GDSYRELGGGGVMEEGGKQVRSAG---VACDDEELANRLHREPDVPPTGPAMKRFAREALPEMTSLAKTLER 180          
BLAST of mRNA_Ecto-sp13_S_contig6859.17822.1 vs. uniprot
Match: D7FY46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY46_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 7.160e-11
Identity = 40/143 (27.97%), Postives = 73/143 (51.05%), Query Frame = 1
Query:  910 RLIREALPDLTSVAKTLDRSNTCSGVAGLLFHGNVSYMQAI------AGDQSESLESLDACVDVVLRYPGITRFR--PHMVHCMLAAGHFFNRRDMYDAMRRVYNSILPMGCSQAPPYEEWRSVSQICGDILCRSLEAQALQP 1314
            ++ R ALP++  + +  + S     V  LL++ N+S +Q +       GD ++++E++   + V+LR+PG+ R++   H+ H  L        R+ Y+ +R  YN + P G    P +E W+ +S IC  + CR  E     P
Sbjct:   92 KMHRGALPEMLRLKEHFESSMRLD-VGRLLYYMNLSLLQLVNHGRGGGGDVADAVEAVQRGLRVILRFPGLCRYKCWSHLCHTQLWCLALGPDREPYEELRAAYNPVRPSGSPLVPAFEHWQGMSDICNHVHCRRGERMGFAP 233          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6859.17822.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FTE0_ECTSI5.540e-14051.74Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7FTD9_ECTSI6.060e-13850.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTD6_ECTSI1.010e-13348.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L0W7_9PHAE9.380e-13250.38Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5L0K0_9PHAE5.730e-11446.36Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KT43_9PHAE9.840e-4354.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FY46_ECTSI7.160e-1127.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6859contigEcto-sp13_S_contig6859:1438..5953 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2235
Hectar predicted targeting categorysignal peptide
Exons7
Cds size1653
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6859.17822.1prot_Ecto-sp13_S_contig6859.17822.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6859 1765..5698 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463942.2462075-UTR-Ecto-sp13_S_contig6859:1437..17641681463942.2462075-UTR-Ecto-sp13_S_contig6859:1437..1764Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6859 1438..1764 -
1681463942.3509572-UTR-Ecto-sp13_S_contig6859:5698..59531681463942.3509572-UTR-Ecto-sp13_S_contig6859:5698..5953Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6859 5699..5953 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463942.2634294-CDS-Ecto-sp13_S_contig6859:1764..23861681463942.2634294-CDS-Ecto-sp13_S_contig6859:1764..2386Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6859 1765..2386 -
1681463942.2755418-CDS-Ecto-sp13_S_contig6859:2729..29001681463942.2755418-CDS-Ecto-sp13_S_contig6859:2729..2900Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6859 2730..2900 -
1681463942.2860966-CDS-Ecto-sp13_S_contig6859:3244..33521681463942.2860966-CDS-Ecto-sp13_S_contig6859:3244..3352Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6859 3245..3352 -
1681463942.295073-CDS-Ecto-sp13_S_contig6859:3631..36731681463942.295073-CDS-Ecto-sp13_S_contig6859:3631..3673Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6859 3632..3673 -
1681463942.3097756-CDS-Ecto-sp13_S_contig6859:4245..45981681463942.3097756-CDS-Ecto-sp13_S_contig6859:4245..4598Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6859 4246..4598 -
1681463942.322093-CDS-Ecto-sp13_S_contig6859:5059..51791681463942.322093-CDS-Ecto-sp13_S_contig6859:5059..5179Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6859 5060..5179 -
1681463942.3387482-CDS-Ecto-sp13_S_contig6859:5461..56981681463942.3387482-CDS-Ecto-sp13_S_contig6859:5461..5698Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6859 5462..5698 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6859.17822.1

>prot_Ecto-sp13_S_contig6859.17822.1 ID=prot_Ecto-sp13_S_contig6859.17822.1|Name=mRNA_Ecto-sp13_S_contig6859.17822.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=551bp
MFTCSPSSRRSTALFLNGIVLSTGFTSHFSVMLFVHVLAGVCSSPHACRC
GSDVQDKSESYLSFAVNIVTKLRPEDVPKEFGLMLVITNKMRVTLHIAHH
RVIGDYLSACCNNVVELPQAQNVVTQREVCSMVLAADRRMSQAFVADMTS
AKVFQNLENREPGLRGEFHREPEGGGVMQEGDDQVWCAGTEGVACEKEEL
ANLVHREPDVPPPGAAMKRLIREALPDLTSVAKTLDRSNTCSGVAGLLFH
GNVSYMQAIAGDQSESLESLDACVDVVLRYPGITRFRPHMVHCMLAAGHF
FNRRDMYDAMRRVYNSILPMGCSQAPPYEEWRSVSQICGDILCRSLEAQA
LQPRDEEGPWQSNPAADGLAPYGLLSGLMESPYHGVETRSSGSPPAPATA
TGVSAVPSVLPETPHARRRVSQNVVGDDFAAADAAGDMRRKPGLAAMLIP
ESACSEEASEACGVRQNWSRPAAPGQHLRSGGDTVAENAAAAAAAAAAAA
AAAAAHTHTVEPVEEDVELWGREITLTDADLMDAAAVFARDEGLLLGEGL
*
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mRNA from alignment at Ecto-sp13_S_contig6859:1438..5953-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6859.17822.1 ID=mRNA_Ecto-sp13_S_contig6859.17822.1|Name=mRNA_Ecto-sp13_S_contig6859.17822.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4516bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6859:1438..5953- (Ectocarpus species13 EcNAP12_S_4_19m)
GGCGAGTCGAACGCAAGACGTGCATTCCAGGCCTAGCTACCTCAACCAAC TCGTTTCAGGCATCGGTTATTTCACCGACTGATAACTTTCAGTAGCATCC TTGATTTCCGCTATGAATCTATGCCCGAGGCCTGTCATGAAGGACCTTCA CCGTACTTGTCGTCTACTCTCCGCCCCCACCCCTCCTGCTCGCTTTTGGA CTTCCAACTGTAAGAGCTGAACTTCTCGCGCACCCAACTGGTCAAACGTT GACGCATGTTTACCTGTTCCCCTTCGTCGCGACGATCCACCGCGTTGTTC CTCAACGGCATCGTGCTATCAACGGGCTTCACTTCCCACTTCTCTGTCAT GCTGTTTGTACACGTTTTAGCTGGCGTGTGCTCCTCACCGCATGCTTGTC GCTGTGGTTCCGATGTGCAGGACAAAAGCGAAAGCTACCTGTCCTTCGCG GTGAATATTGTGACCAAGCTTAGACCAGAGGACGTGCCAAAGGTGACTGT CATGGCGCAAGGCATGGCGCAGTTGCGTCACAGTGCTCAGAGCGTGTGTG TAGTGTCACAAGAGTTGGCGGTCGCATGGCATGGTTGTGTGACTTACGCT ACGGTGGTGTTGGTGCATTGCCTGGCGGACATGCCCCGTCGGCTCATGCA CGCTGTTCACAATGGCAGTTTCATTGACGATGGATCGGTTGTGTGTGAGC TTGGCTATTCGCGGTGCATCAAGCGTTCTTGGGGATCGGAAGGTCAAACC CCCCTACCCCGTTTTGCCCCGCAGGAATTTGGCCTAATGTTGGTGATCAC GAACAAGATGAGGGTGACTCTGCATATCGCCCATCACCGGGTAATTGGGG ACTATCTCAGCGCTTGCTGCAACAACGTCGTAGAGCTGCCCCAGGTGAGT GGTCTTAAGACCTCAATCCAAAAACTAAGTGGTCTATTTCGTGAGCGGTT GGCCCCTGGCCTCGTCTTCGTTTAGTCGGGTTCCTTGGTTCATGGCCGTT CTCCGGTTCGTGAGTAGACGGGTGGCATTTGTTTTTTTGTGGAATATTTT CCGGTTTCCAGGTTTGGATGCTTTTACTTCTCAGGAGCGTTTTCCTGCAT GATTGTGGGCCATGACTCGACAAGAAACACTGCACATGTAATGGTTGGTC GTGGGGGTCCGATCCAATCAGCCAGCAGCCACCCTTATTGTCAAGGCATG GTGCTGTATGCACTCGATTCCAGGTTCTACGGACGACGGACCGTTATTGA CGTATCCGAACTTCCATCAACCACCTGCTTTGTGTATTTCCTCGCGTATG AACATACCATATGGTATTACACGAACTCCGCGACTCGGGCGGGCTGGTGC GGCAGGCTCAAAACGTCGTGACCCAGAGGGAGGTGTGCAGTATGGTCCTC GCGGCAGACCGCCGGATGAGCCAGGCCTTCGTCGCAGACATGACGTCGGC GAAAGTGTTTCAAAACTTGGAGAATCGGGAACCCGGCCTGCGGGGAGAGT TCCACCGAGAGCCGGAAGGCGGTGGAGTGATGCAGGAGGGTGACGACCAA GTGTGGTGTGCGGGCACGGAAGGGGTGGCTTGTGAGAAAGAGGAGCTAGC CAACCTGGTGCACCGTGAACCAGACGTGCCCCCCCCGGGAGCCGCTATGA AGCGCCTCATCCGGGAGGCTCTGCCAGACCTGACGAGCGTGGCGAAGACG CTGGACAGGTGGACGATAACCAGGGGGAAAAGATGGCGGACAACCTCTGC AAGAGCATATTTCTTTCGTGTTTGAGTTTGCGACGAGCGGGTGATTCATA AGTTCTTGGCGCGAGCTCAATCAAGCCCGAAACACCACGTTTTGATAACG CACTCGTGCTGCAATCGGGTTCGAAGAGGGGTGCACGATGCGTCGGCGGT TTCCCCGTGTAGCGGTCGTTTAGCAAGGCGGTGGTAGGGAGCGGAGCCTG AAGGTCCGACGTTCACCTCTCTGCCTTCAAGCACATCGCTCGAACCGCAA ATCCCGCGCCGGGCGCTTGAACCTCGCCCGCGTCCGGGTGTTTTCAGATA ATACCTGTGTTTGTTTTCGCGAGATGCCAGGAAAAGCATGTCCGCCCTGG TTTGTGAAGTTCCGGTGCATGTCGATCTACAACCAGAGACGACTGATGCG ACACCACGCCTTCCCACGCTTCCTGCTGCGTCCGCTGCTCCCCAACACAC CAACTGCACAATCTGCAACATGGTTCCGATCGCTGCCATTGTGGTGCTCA TTGACGCGATGGCGACCTGCGGGCTCCCAGGTCCAACACATGCTCCGGGG TCGCCGGTCTACTCTTTCACGGGTGAGGAAGTGGGCGCCGTCTGTGAAGT CTTCCATGGAGAACATTTCAACGCCTCCAGGATGTGCTTTAGTCCGTGGC TGCGTGCGAAAAGCACCCCCTTCTGCCTCTCCCTGGCTTGCGGTTGTTTT GGGGTTTCCGAAAATGGCGACTGCGTATCCGTGGGCAAGGTCACTGAAAT GACCCCGGCACGTTTTGATGCTCGCCCACCTGTATTTCATTTGTTGCACG TTTGGTGTATGCTCCAACCCGTCGTCCCCCCCTTTGCTCTCGCCTCCGTA GCAACGTGTCCTACATGCAGGCTATTGCCGGCGATCAAAGCGAGTCCTTG GAGTCCCTCGACGCCTGCGTAGACGTCGTGCTGCGGTACCCCGGCATCAC CCGTTTCAGGTTTGTTTGTGGGCATCCCATTTTGGCTTGTGCATTGTGTT CCCCATGGGCGAGTGAAACAAAAGGGGTGAGATTGAATCTCTCTTATTAT TCCTCTCCAGTCGAAAGCTCCCTGATGTTCGCGTGTCTTTCGTTGGTTTG TCTCGCGTACGCGTCGAATGTGTTGGAGTACACCGTTTCCCGAAGAATGA CGGCGAGAGTCTGCTGTCATACGTTTTTCGCGTCTGGTCGAGATTCGAAC CCACGTCCAAACGTTGGAAGGTTGCAAGGTTACGAACTGGAGCCACTAAC CAGGTTTCGTCACCCCAACTGTCGTGTGTGCGGGTTCGTGTCACTTCCCG CAGGCCTCACATGGTACACTGCATGCTCGCGGCGGGTCACTTTTTCAATC GGCGAGACATGTACGATGCCATGAGAAGGGTGTACAACTCCATTCTCCCC ATGGGATGTTCCCAAGCTCCACCCTACGAAGAGTGGAGGTCGGTTAGTCA GATCTGCGGGGACATCTTGTGCAGGTATGCTCATGAACTGCCATCTGAAC GGTTGTGGAATGAAGTTGTTTCTGAACGCCGTAGTGGTTTACGCAGGAAG CCGTTTGGTGTTAACGCCTGCTGAGCGATCGAAAATGTTGGTGCTCTTTG TATATAACCACCTCGTGTGATTCATTGCGGGTCCCCATAAGCAGTAATAT GCCGCCACACCTGCTGCCTGTCCGTCCTCGGCTCCGTGCGATGTTTCTCA ATGTCTTACGTGTGCCACTGGCCCGCATGGATTCGGGTTTCATACGTAGT CATTTTCAGTGTTCGCCTGTTGCGTCCGTCTTGCTTCTCGCGCGCCTATT CCCACCCCGGACGACAGGTCGCTGGAGGCGCAAGCTCTTCAACCACGCGA CGAGGAGGGACCTTGGCAGTCGAACCCCGCTGCTGATGGTTTGGCGCCTT ATGGACTGTTGTCCGGCTTGATGGAGTCTCCCTACCACGGAGTAGAAACT CGGAGCAGTGGCTCGCCGCCAGCCCCGGCAACAGCCACGGGTGTTTCTGC TGTGCCATCGGTGCTCCCGGAAACCCCTCACGCCCGGCGAAGGGTGTCAC AAAATGTCGTCGGGGATGACTTTGCGGCTGCTGATGCTGCTGGAGACATG CGGCGGAAACCTGGGCTGGCGGCGATGCTCATCCCCGAATCCGCATGTTC TGAAGAGGCTTCAGAAGCTTGCGGTGTTCGTCAGAATTGGTCACGTCCGG CCGCCCCTGGACAGCACCTCCGTTCGGGAGGTGATACTGTTGCTGAGAAT GCTGCTGCTGCTGCTGCTGCTGCGGCGGCGGCGGCGGCGGCGGCGGCGGC ACACACACACACGGTCGAACCTGTGGAAGAAGACGTGGAGCTCTGGGGAC GGGAGATAACCTTGACTGATGCGGATCTAATGGATGCTGCTGCAGTGTTT GCGAGAGACGAAGGACTCCTGCTGGGAGAGGGGTTGTAGAAGTGTTTTAG CAATGGCCAACTACCCAGCATGGTTCCCTCTCTTTCTATTATGGAGAAGC TGGATCTCGGGTACACCGGTGGTGTCCTGTTACCGTAAGGTTGTGAGTAA TCGCGCCCCCGTGCGCTCATTTCATATACACCTTTGCCGTATGATCGTGA TCGCACAGGGGTGCGATGACTCCGCACCGTGCCGTGACTCCATGAACTCT GTGCGGAAATCGAATGAAATCGTTTAGTTGCGATATTTTCCTCCCGTTTG CACGGTCCTGAGAAAACCCGAAGGCTATACCTTGACTTCTGCGAACGCCA AGGTGTGATAACTCCG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6859:1438..5953-

>mRNA_Ecto-sp13_S_contig6859.17822.1 ID=mRNA_Ecto-sp13_S_contig6859.17822.1|Name=mRNA_Ecto-sp13_S_contig6859.17822.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1653bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6859:1438..5953- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTTTACCTGTTCCCCTTCGTCGCGACGATCCACCGCGTTGTTCCTCAA
CGGCATCGTGCTATCAACGGGCTTCACTTCCCACTTCTCTGTCATGCTGT
TTGTACACGTTTTAGCTGGCGTGTGCTCCTCACCGCATGCTTGTCGCTGT
GGTTCCGATGTGCAGGACAAAAGCGAAAGCTACCTGTCCTTCGCGGTGAA
TATTGTGACCAAGCTTAGACCAGAGGACGTGCCAAAGGAATTTGGCCTAA
TGTTGGTGATCACGAACAAGATGAGGGTGACTCTGCATATCGCCCATCAC
CGGGTAATTGGGGACTATCTCAGCGCTTGCTGCAACAACGTCGTAGAGCT
GCCCCAGGCTCAAAACGTCGTGACCCAGAGGGAGGTGTGCAGTATGGTCC
TCGCGGCAGACCGCCGGATGAGCCAGGCCTTCGTCGCAGACATGACGTCG
GCGAAAGTGTTTCAAAACTTGGAGAATCGGGAACCCGGCCTGCGGGGAGA
GTTCCACCGAGAGCCGGAAGGCGGTGGAGTGATGCAGGAGGGTGACGACC
AAGTGTGGTGTGCGGGCACGGAAGGGGTGGCTTGTGAGAAAGAGGAGCTA
GCCAACCTGGTGCACCGTGAACCAGACGTGCCCCCCCCGGGAGCCGCTAT
GAAGCGCCTCATCCGGGAGGCTCTGCCAGACCTGACGAGCGTGGCGAAGA
CGCTGGACAGGTCCAACACATGCTCCGGGGTCGCCGGTCTACTCTTTCAC
GGCAACGTGTCCTACATGCAGGCTATTGCCGGCGATCAAAGCGAGTCCTT
GGAGTCCCTCGACGCCTGCGTAGACGTCGTGCTGCGGTACCCCGGCATCA
CCCGTTTCAGGCCTCACATGGTACACTGCATGCTCGCGGCGGGTCACTTT
TTCAATCGGCGAGACATGTACGATGCCATGAGAAGGGTGTACAACTCCAT
TCTCCCCATGGGATGTTCCCAAGCTCCACCCTACGAAGAGTGGAGGTCGG
TTAGTCAGATCTGCGGGGACATCTTGTGCAGGTCGCTGGAGGCGCAAGCT
CTTCAACCACGCGACGAGGAGGGACCTTGGCAGTCGAACCCCGCTGCTGA
TGGTTTGGCGCCTTATGGACTGTTGTCCGGCTTGATGGAGTCTCCCTACC
ACGGAGTAGAAACTCGGAGCAGTGGCTCGCCGCCAGCCCCGGCAACAGCC
ACGGGTGTTTCTGCTGTGCCATCGGTGCTCCCGGAAACCCCTCACGCCCG
GCGAAGGGTGTCACAAAATGTCGTCGGGGATGACTTTGCGGCTGCTGATG
CTGCTGGAGACATGCGGCGGAAACCTGGGCTGGCGGCGATGCTCATCCCC
GAATCCGCATGTTCTGAAGAGGCTTCAGAAGCTTGCGGTGTTCGTCAGAA
TTGGTCACGTCCGGCCGCCCCTGGACAGCACCTCCGTTCGGGAGGTGATA
CTGTTGCTGAGAATGCTGCTGCTGCTGCTGCTGCTGCGGCGGCGGCGGCG
GCGGCGGCGGCGGCACACACACACACGGTCGAACCTGTGGAAGAAGACGT
GGAGCTCTGGGGACGGGAGATAACCTTGACTGATGCGGATCTAATGGATG
CTGCTGCAGTGTTTGCGAGAGACGAAGGACTCCTGCTGGGAGAGGGGTTG
TAG
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