mRNA_Ecto-sp13_S_contig6801.17744.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6801.17744.1 vs. uniprot
Match: D7G8R9_ECTSI (Acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R9_ECTSI) HSP 1 Score: 590 bits (1521), Expect = 1.710e-208 Identity = 323/396 (81.57%), Postives = 337/396 (85.10%), Query Frame = 1
Query: 1 IMEDPTKIAEVDFRFAGPGDTAEIVTLVNDAFSVEKGGSGLAFTTLDRVSKEEVDACLHGAFVEKRWLVLETPHPEETMVAACLICTGTTPGKGGVELLAVESARQGRGLGSHLLRRAEGILLNFRCRFVRMRVPQWREDVLGWVDKRGYKETGGGVWGELDGESAEDLTRPTRYFMLTHDLLTAKEVAGTFGDGTARYTAAAAAAAERVALGGARQPTWKPTSSEASRGLDGS-TRKAKDEEDSGRLAGFLSSVLKGLADAEVEDQERKEGIHAKGVASAPMADTAVDAAAATPSGPFQ-----------------PLSGTTTNNATAAAGEDGYVSASRNHFEVVELPIVGRGNDEPVGGEESVEGLLGSLVRTLNTEQGRADFRRLAATGSTS 1134
+ME PTKIAEVDFRFAGP DTAEIVTLVNDAFSVEKGGSGLAFTT DRVSKEEVDACLHGA EKRWLVLETPHPEETMVAACLIC GTTPGKG VELLAVE ARQGRGLGSHLLRRAEGILLNFRCRFVRMRVPQWREDVLGWV KRGYKETGGGVWGELDGESAE LTRPTRYFMLTHDLLT ++VAGTFGDGT R+TAAAAAAAERVALG R+PT KP SSEASRGLDG+ T ++KDEEDSGRLAGFLSSVLKGLADAEVEDQ+ GI AK VA+APMAD +V A AATPS P Q P +GTTTN +TAA GEDG V ASRN FEVVELP VG G DE GEESVE LLGSL+RTLNTEQGRADFRRLAA GSTS
Sbjct: 1 MMEAPTKIAEVDFRFAGPEDTAEIVTLVNDAFSVEKGGSGLAFTTRDRVSKEEVDACLHGACAEKRWLVLETPHPEETMVAACLICAGTTPGKGSVELLAVEPARQGRGLGSHLLRRAEGILLNFRCRFVRMRVPQWREDVLGWVGKRGYKETGGGVWGELDGESAEGLTRPTRYFMLTHDLLTDEKVAGTFGDGTTRFTAAAAAAAERVALGSTRKPTSKPASSEASRGLDGNNTVQSKDEEDSGRLAGFLSSVLKGLADAEVEDQD---GIDAKDVAAAPMADMSVGAEAATPSCPLQYPAPSDGTGASEGATCQPCAGTTTNISTAAPGEDGSVPASRNDFEVVELPSVGGGGDEAADGEESVEDLLGSLMRTLNTEQGRADFRRLAAAGSTS 393
BLAST of mRNA_Ecto-sp13_S_contig6801.17744.1 vs. uniprot
Match: A0A6H5L4U8_9PHAE (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4U8_9PHAE) HSP 1 Score: 497 bits (1280), Expect = 1.680e-172 Identity = 277/344 (80.52%), Postives = 288/344 (83.72%), Query Frame = 1
Query: 157 EVDACLHGAFVEKRWLVLETPHPEETMVAACLICTGTTPGKGGVELLAVESARQGRGLGSHLLRRAEGILLNFRCR-FVRMRVPQWREDVLGWVDKRGYKETGGGVWGELDGESAEDLTRPTRYFMLTHDLLTAKEVAGTFGDGTARYTAAAAAAAERVALGGARQPTWKPTSSEASRGLDGSTRKAKDEEDSGRLAGFLSSVLKGLADAEVEDQERKEGIHAKGVASAPMADTAVDAAAATPSGPF-----------------QPLSGTTTNNATAAAGEDGYVSASRNHFEVVELPIVGRGNDEPVGGEESVEGLLGSLVRTLNTEQGRADFRRLAATGSTS 1134
+VDACLHGA VEKRWLVLETPHPEETMVAACLICTGTTPGKG VELLAV+ A QGRGLGSHLLRRAEGILLNFRCR FVRMRVPQWREDVLGW KRGYKETGGG+WGELD ESAEDLTRPTRYFMLTHDLLT K+VAGTFGDGTARYTAAAAAAAERVALGGAR+PT TSSEAS+GLDGSTRKAKDEEDSGRLAGFLSSVLKGLADAEVEDQE GI AKG A+APMAD AV AAATPS PF QP GTT NN+ AAAGE G V A R+ FEVVELP VG G+ E V EESVE LL SL+RTLNTEQGRADFRRLAA GSTS
Sbjct: 13 QVDACLHGACVEKRWLVLETPHPEETMVAACLICTGTTPGKGSVELLAVKPALQGRGLGSHLLRRAEGILLNFRCRWFVRMRVPQWREDVLGWAGKRGYKETGGGLWGELDRESAEDLTRPTRYFMLTHDLLTDKKVAGTFGDGTARYTAAAAAAAERVALGGARRPTSNSTSSEASKGLDGSTRKAKDEEDSGRLAGFLSSVLKGLADAEVEDQE---GIDAKGFATAPMADMAVGVAAATPSCPFLPPAPSDETGASDGATCQPCVGTTANNSIAAAGEHGSVPALRDDFEVVELPSVGGGDGEAVDREESVEDLLSSLMRTLNTEQGRADFRRLAAIGSTS 353
BLAST of mRNA_Ecto-sp13_S_contig6801.17744.1 vs. uniprot
Match: A0A7S3UW89_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW89_HETAK) HSP 1 Score: 124 bits (311), Expect = 5.020e-28 Identity = 69/168 (41.07%), Postives = 95/168 (56.55%), Query Frame = 1
Query: 28 EVDFRFAGPGDTAEIVTLVNDAFSVEKGGSGLAFTTLDRVSKEEVDACLHGAFVEKRWLVLETPHPEETMVAACLICTGTTPGKGGVELLAVESARQGRGLGSHLLRRAEGILLNFRCRFVRMRVPQWREDVLGWVDKRGYKETGGGVWGELDGESAEDLTRPTRYFM 531
++D RFA D +I+ L+N AF VE G +GLAF +R++ EEV A L W+VLE+ PEE VAA L+ +G V LAV + Q RG+G +LL + E I NF C+ ++ +WR DV W+ K GYKE GGG+W + E +RPT Y +
Sbjct: 60 KLDMRFADEDDCEDILNLINQAFLVEMGDTGLAFKNCNRMTSEEVMAHLRPG-ASSNWVVLESQPPEEVAVAAALVVLAPALHEGRVACLAVHPSVQRRGIGRYLLHKVESIFSNFACKDSVVQTAEWRTDVQSWLLKNGYKEMGGGLWPHV-----EHCSRPTSYLL 221
BLAST of mRNA_Ecto-sp13_S_contig6801.17744.1 vs. uniprot
Match: A0A7S2WC10_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WC10_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 3.220e-15 Identity = 61/169 (36.09%), Postives = 89/169 (52.66%), Query Frame = 1
Query: 4 MEDPTKIAEVDFRFAGPGDTAEIVTLVNDAFSVEKGGSGLAFTTLDRVSKEEV--DACLHGAFVEKRWLVLETPHPEETMVAACLICTGTTPGKGGVEL-----LAVESARQGRGLGSHLLRRAEGILLNFRCRFVRMRVPQWREDVLGWVDKRGYKETGGGVWGELDG 489
M + +DFRFA D +IV +VNDAF+ G +F R+++ V D G + RWL+LETP PEE +VA+ + G G ++ LAV +G+G+GS LLR+ E CR + + +P E V W+ +RG+K+ GGG+W E DG
Sbjct: 1 MAGARSVPVLDFRFADEEDVDDIVRVVNDAFA----GPDHSFRAGPRLARPLVVEDTDRPG---QARWLLLETPAPEENVVASVRLQLDDDAGLGRGKMAILTALAVHPDWRGKGVGSLLLRKCEASSRGLGCRSISIDLPMSAESVQSWLSRRGWKQLGGGLW-EGDG 161
BLAST of mRNA_Ecto-sp13_S_contig6801.17744.1 vs. uniprot
Match: A0A7S2D077_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D077_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 2.050e-14 Identity = 67/198 (33.84%), Postives = 95/198 (47.98%), Query Frame = 1
Query: 28 EVDFRFAGPGDTAEIVTLVNDAFSVE--------------KGGSGLAFTTLDRVSK-----EEVDACLHGAFVEKRWLVLETPHPEETMVAACLIC----TGTTPGKGGVEL-LAVESARQGRGLGSHLLRRAEGILLNFRCRFVRMRVPQWREDVLGWVDKRGYKETGGGVWGELDGESA---------EDLTRPTR 522
++D RFA D +I +VN AF++E + AF R++ E++ G RW+VLETP PEE +VAA + G GK G L L+VE QG G+G+ LL R+E + CR V + V RE++ W+ KRG+KE GGG+W E A +DLT+P +
Sbjct: 59 KLDLRFADEEDAEDIAAVVNAAFALEVRRPDNSLDVGVAPPPHAASAFRATARLADMAALVAELEQSRRGGSEAVRWIVLETPCPEEKVVAAVAVSIIEDAGLRRGKMGRLLCLSVEPTSQGGGVGTQLLLRSEAFCRSQGCRSVGIDVAMKREELQPWLKKRGWKENGGGLWSEDSPAIAVNTEYLTFVKDLTKPEK 256
BLAST of mRNA_Ecto-sp13_S_contig6801.17744.1 vs. uniprot
Match: A0A7S3M8W4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8W4_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 4.620e-9 Identity = 57/173 (32.95%), Postives = 82/173 (47.40%), Query Frame = 1
Query: 16 TKIAEVDFRFAGPGDTAEIVTLVNDAFSVE-KGGSG-LAFTTLD-RVSKEEVDACLHGAFVEKRWLVLETPHPEETMVAACLICTGTTPGKGGVELLAVESARQGRGLG--SHLLRRAEGILLNFRCRFVRMRVPQWREDVLGWVDKRGYKETGGGVWGELDGESAEDLTRPT 519
+K ++DFRFA D +IV VN+A+S+E SG + F +V EV+ L + +WLVLETP PEE +V A + G V++ V A L LL + E + N R + QWR D+ GY+E G +W E + +LT+PT
Sbjct: 31 SKKQKLDFRFADEMDGMDIVQFVNEAYSIEWNPDSGPMCFRKEGYKVETNEVEKDLLS--MPTKWLVLETPMPEELIVGAARVKYDAAR-NGRVDVFCVAGADADTKLSIMKQLLSKVETVCYNIGLRSCIVEAAQWRTDLEELFTSCGYEEASGHIWPE---DRQHELTKPT 197 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6801.17744.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6801.17744.1 >prot_Ecto-sp13_S_contig6801.17744.1 ID=prot_Ecto-sp13_S_contig6801.17744.1|Name=mRNA_Ecto-sp13_S_contig6801.17744.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=378bp MEDPTKIAEVDFRFAGPGDTAEIVTLVNDAFSVEKGGSGLAFTTLDRVSKback to top mRNA from alignment at Ecto-sp13_S_contig6801:2219..7696- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6801.17744.1 ID=mRNA_Ecto-sp13_S_contig6801.17744.1|Name=mRNA_Ecto-sp13_S_contig6801.17744.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5478bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6801:2219..7696- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6801:2219..7696- >mRNA_Ecto-sp13_S_contig6801.17744.1 ID=mRNA_Ecto-sp13_S_contig6801.17744.1|Name=mRNA_Ecto-sp13_S_contig6801.17744.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1134bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6801:2219..7696- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |